Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004166

Physical Location & Seq

Genomic Coordinates Forward (+)

40485935 .. 40492743

Gene Structure 6809 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013760

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGCTTCCATCTCTGCTCCAACCCCAGCTCCTCACAACCTTACCTTCCCCAACCCCAAATCCTACCCCTCCTCCGCTTCGAAAACCCCATTCTACCCTTCCTCTTCCTCTAGATTTTCCGATTCATCCCTCTGCCGGTGCCGGTGCCGGTGCAGGAACCCTTCCTCCGACGACTCAGTCCAGTGGAGATGGGACTCTGCGCTCCAGGACCTCCTCAAAAACGCCATGAAACGACTCGATTTCCAAGGACAAGGACAAGGAGGAGGAGGCGCTACTGCTAGCAAGGCCGACGAGGAGGAGCCTGACTGGGATTGGGATCGCTGGCGTCAGCATTTCCTCGAGGTCGAAGACCAAGAGCGCCTCGTCTCACTTCTCAAGTCACAGTTGGGTCGAGCTGTAAATGTAGAGGATTTTGAGGATGCTGCTAGGCTCAAGGTTGCCATTGCTGCCGCCTCCACAAACGACGTCGTCGGCTCAGTCATTTCTCGTCTCAATATAGCTATACAGGACGAGCGTTACCAGGAAGCAGCATTTTTCCGGGATAATGCCGGTGCTGGATTGGTGGGTTGGTGGGCTGGCATCTCTAAGGATAAGAAGGACCCTCACGGCCTCATTATACGAGTCACTGCAGAGCATGGACGATATGTCGCAAGGAGTTATAGTCCCCGGCAGCTCGCTACAGCTGCAGCTGGTGTTCCACTGTTTGAGATCTTTTTAACAGTGAATAAAAAGGGTGAATACAAACAACAGGCTGTGTACTTAAAGCGGGGAGGAGTATTTCCAGATTCTCCACAAGTTAGCTCCAAAGCAATGGACACCACTACCACCTTGAATCCTTTAGATTCAACTGAAGAAAAAAGTGATCTATTTCTTGGAGGTAGTGACGATACTGAAGATGGTGATGATATGGATGATGATTTGGATCTTTCTGAGGGACTCTCTGGATTTCAGAGCATCTTGAGGGATATGATTCCTAATGTGAAGGTCAAGGTCTTGAAAGTGACATCACCAGGAAAGGTAGATCGGGATCTAATATCTAAAGTGATTGAGCAGATCATTGAGGAAGATGATGAAGATAAGGATAATGAAATTGAGAATTCAGAAGCTGAAGATGAGGACGAGGATGAAGACGAAGACGAAGAAGAGGTTGAAGGTGATCAAGAGACAGATGTGATTGAACTGGATGCTGATCCTGCAATTATTCAAAATGCTGAGAGACAAGAAATTGCAGTTAAAGTTGTTTTTGGTGGTCTTGGGCAGAAAATATCTAACATCCCACCTAGTAAAAATTTGCTCCGAGTCCCTGCTAAAATAGAGAAGAAGGGGCGTCTATCCTTTTCTTTTACTGTTGAGAAAGATATTAATCAACAGGATTCTCGTGACAAGGAACAGAGTTCAGAAGATAAAAAAGCTAAAGTTGGAGGTCAACGTAGCATTGACAATGTAATGTTTGATCTTGCTAAGTTCATTGGAAAAGAGAAGATTCCATTGAAGGTACTCAAAGATGTCGGTGAGTTGATAAATCTCGCTCTCAGTCAGGTTCATAATCATCAGCCATTGTCAGGATCCACTACTTTCAATCGCATTGAAATGCCCATTTCTCAAGATCCATTAAATGGACTATACATTGGTGCACATGGGCTCTACACCTCAGAAGTTATTCACCTGAGTCGTAAGTTTGGCCAATGGAAAGAAGACAATGGGACTAAGGAACCCTCAAACCTCGAGTTTTATGAATATGTGGAAGCCTTAAAACTTACTGGGGATCCTTATGTACCAGCTGGCCAGGTGGCATTCCGTGCAAAGATTGGGAAAAGATATCAGCTTCCTCATAAAGGGATCATACCAGAAGAGTTTGGAGTGGTTGCTCGATATAAAGGACAGGGGAGGCTTGCTGAGCCAGGGTTTCGTAATCCTCGATGGGTCGATGGTGAACTTGTTATTCTTGATGGAAAGTACATTAAAGGAGGACCTGTTGTTGGGTTGTTGACATCTTTTCTTCGCAATTTTGTAGGTTTAGATATGGATTACATCTTCAAAGGGCTACATATCCAATGTTTACTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

690

Amino Acids

76.62

Weight (kDa)

4.92

Isoelectric Point (pI)

46.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_D1_bind	PF12014	526 - 653	8.7e-26	Cyclin D1 binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004166)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33630 AT4G33630 AT4G33630
fragaria_vesca	FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660
malus_domestica	MD05G1048100.v1.1 MD10G1054700.v1.1
prunus_persica	Prupe.8G070300_v2.0.a1 Prupe.8G070300_v2.0.a1
pyrus_communis	pycom10g04160 pycom10g04170
rosa_chinensis	RchiOBHm_Chr6g0270901 RchiOBHm_Chr6g0270911
rosa_laevigata	RLG00000013760
rosa_multiflora	Rmu_co8045566.1_g000001 Rmu_sc0007274.1_g000002 Rmu_ssc0000474.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197500
rosa_rugosa	Rorug06G0057200
rosa_samantha	Rh6AG176700 Rh6BG180100 Rh6CG176200 Rh6DG168400
rosa_wichuraiana	Rw6G015060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	176
AatII	GACGTC	1 cut(s)	468
AbsI	CCTCGAGG	1 cut(s)	338
AccB1I	GGYRCC	2 cut(s)	138, 144
AccB7I	CCANNNNNTGG	1 cut(s)	1616
AciI	CCGC	3 cut(s)	75, 450, 766
AcoI	YGGCCR	2 cut(s)	1681, 1783
AcsI	RAATTY	2 cut(s)	1096, 1288
AcuI	CTGAAG	3 cut(s)	870, 912, 1128
AcyI	GRCGYC	3 cut(s)	325, 465, 1327
AfaI	GTAC	4 cut(s)	758, 1497, 1776, 1958
AfiI	CCNNNNNNNGG	5 cut(s)	135, 1562, 1616, 1835, 1979
AhdI	GACNNNNNGTC	1 cut(s)	644
AjnI	CCWGG	5 cut(s)	204, 519, 1009, 1785, 1900
AloI	GAACNNNNNNTCC	2 cut(s)	149, 181
Alw21I	GWGCWC	1 cut(s)	1636
Alw26I	GTCTC	4 cut(s)	370, 494, 1157, 1210
Alw44I	GTGCAC	1 cut(s)	1632
AlwNI	CAGNNNCTG	1 cut(s)	1106
Ama87I	CYCGRG	2 cut(s)	338, 1724
AoxI	GGCC	4 cut(s)	285, 607, 1681, 1783
ApaLI	GTGCAC	1 cut(s)	1632
ApeKI	GCWGC	6 cut(s)	422, 446, 527, 670, 683, 686
ApoI	RAATTY	2 cut(s)	1096, 1288
AseI	ATTAAT	1 cut(s)	1362
Asp700I	GAANNNNTTC	1 cut(s)	1659
AspLEI	GCGC	3 cut(s)	202, 272, 360
AspS9I	GGNCC	3 cut(s)	208, 598, 1970
AsuC2I	CCSGG	2 cut(s)	539, 667
AsuHPI	GGTGA	7 cut(s)	746, 911, 999, 1166, 1523, 1655, 1943
AsuII	TTCGAA	1 cut(s)	80
AsuNHI	GCTAGC	1 cut(s)	278
AvaI	CYCGRG	2 cut(s)	338, 1724
AvaII	GGWCC	3 cut(s)	208, 598, 1970
BaeGI	GKGCMC	1 cut(s)	1636
BalI	TGGCCA	2 cut(s)	1683, 1785
BamHI	GGATCC	2 cut(s)	1565, 1765
BanI	GGYRCC	2 cut(s)	138, 144
BanII	GRGCYC	1 cut(s)	1644
BauI	CACGAG	1 cut(s)	1377
BbsI	GAAGAC	4 cut(s)	354, 1134, 1140, 1701
Bbv12I	GWGCWC	1 cut(s)	1636
BbvI	GCAGC	6 cut(s)	409, 433, 539, 670, 682, 698
BccI	CCATC	6 cut(s)	17, 183, 890, 1914, 1922, 1943
BceAI	ACGGC	1 cut(s)	622
BciT130I	CCWGG	5 cut(s)	206, 521, 1011, 1787, 1902
BclI	TGATCA	1 cut(s)	1156
BcnI	CCSGG	2 cut(s)	539, 667
BcoDI	GTCTC	4 cut(s)	370, 494, 1157, 1210
BfaI	CTAG	4 cut(s)	111, 279, 426, 1281
BfmI	CTRYAG	3 cut(s)	627, 678, 684
BfoI	RGCGCY	2 cut(s)	273, 361
BglII	AGATCT	1 cut(s)	708
BisI	GCNGC	7 cut(s)	423, 447, 450, 528, 671, 684, 687
BlpI	GCTNAGC	1 cut(s)	1896
BlsI	GCNGC	7 cut(s)	424, 448, 451, 529, 672, 685, 688
Bme1390I	CCNGG	7 cut(s)	206, 521, 539, 667, 1011, 1787, 1902
Bme18I	GGWCC	3 cut(s)	208, 598, 1970
BmeRI	GACNNNNNGTC	1 cut(s)	644
BmeT110I	CYCGRG	2 cut(s)	338, 1724
BmgT120I	GGNCC	3 cut(s)	208, 598, 1970
BmiI	GGNNCC	8 cut(s)	140, 146, 158, 300, 600, 1567, 1713, 1767
BmrFI	CCNGG	7 cut(s)	206, 521, 539, 667, 1011, 1787, 1902
BmrI	ACTGGG	2 cut(s)	316, 1770
BmsI	GCATC	4 cut(s)	409, 588, 963, 1174
BmtI	GCTAGC	1 cut(s)	282
BmuI	ACTGGG	2 cut(s)	316, 1770
BpiI	GAAGAC	4 cut(s)	354, 1134, 1140, 1701
BplI	GAGNNNNNCTC	2 cut(s)	923, 955
BpmI	CTGGAG	1 cut(s)	188
Bpu1102I	GCTNAGC	1 cut(s)	1896
Bpu14I	TTCGAA	1 cut(s)	80
BpuEI	CTTGAG	4 cut(s)	359, 416, 979, 1587
BpuMI	CCSGG	2 cut(s)	539, 667
BsaBI	GATNNNNATC	5 cut(s)	315, 921, 1026, 1188, 1362
BsaHI	GRCGYC	3 cut(s)	325, 465, 1327
BsaJI	CCNNGG	3 cut(s)	244, 665, 1901
Bsc4I	CCNNNNNNNGG	5 cut(s)	135, 1562, 1616, 1835, 1979
Bse118I	RCCGGY	4 cut(s)	135, 141, 147, 548
Bse1I	ACTGG	4 cut(s)	181, 311, 1185, 1765
Bse3DI	GCAATG	2 cut(s)	441, 816
Bse8I	GATNNNNATC	5 cut(s)	315, 921, 1026, 1188, 1362
BseBI	CCWGG	5 cut(s)	206, 521, 1011, 1787, 1902
BseDI	CCNNGG	3 cut(s)	244, 665, 1901
BseGI	GGATG	6 cut(s)	125, 424, 916, 1129, 1189, 1272
BseJI	GATNNNNATC	5 cut(s)	315, 921, 1026, 1188, 1362
BseLI	CCNNNNNNNGG	5 cut(s)	135, 1562, 1616, 1835, 1979
BseMI	GCAATG	2 cut(s)	441, 816
BseMII	CTCAG	8 cut(s)	189, 489, 921, 1203, 1546, 1658, 1665, 1887
BseNI	ACTGG	4 cut(s)	181, 311, 1185, 1765
BseRI	GAGGAG	8 cut(s)	21, 61, 203, 276, 279, 308, 311, 786
BseSI	GKGCMC	1 cut(s)	1636
BseXI	GCAGC	6 cut(s)	409, 433, 539, 670, 682, 698
BseYI	CCCAGC	1 cut(s)	25
BsgI	GTGCAG	1 cut(s)	172
BshFI	GGCC	4 cut(s)	287, 609, 1683, 1785
BshNI	GGYRCC	2 cut(s)	138, 144
BsiHKAI	GWGCWC	1 cut(s)	1636
BsiHKCI	CYCGRG	2 cut(s)	338, 1724
BsiSI	CCGG	6 cut(s)	136, 142, 148, 538, 549, 667
BslFI	GGGAC	5 cut(s)	206, 648, 948, 1286, 1717
BslI	CCNNNNNNNGG	5 cut(s)	135, 1562, 1616, 1835, 1979
BsmAI	GTCTC	4 cut(s)	370, 494, 1157, 1210
BsmBI	CGTCTC	2 cut(s)	370, 494
BsmFI	GGGAC	5 cut(s)	206, 648, 948, 1286, 1717
BsmI	GAATGC	1 cut(s)	1793
BsnI	GGCC	4 cut(s)	287, 609, 1683, 1785
BsoBI	CYCGRG	2 cut(s)	338, 1724
Bsp119I	TTCGAA	1 cut(s)	80
Bsp1286I	GDGCHC	2 cut(s)	1636, 1644
Bsp1720I	GCTNAGC	1 cut(s)	1896
BspACI	CCGC	3 cut(s)	75, 450, 766
BspANI	GGCC	4 cut(s)	287, 609, 1683, 1785
BspCNI	CTCAG	8 cut(s)	188, 488, 922, 1204, 1545, 1659, 1664, 1888
BspLI	GGNNCC	8 cut(s)	140, 146, 158, 300, 600, 1567, 1713, 1767
BspMAI	CTGCAG	2 cut(s)	631, 688
BspOI	GCTAGC	1 cut(s)	282
BspT104I	TTCGAA	1 cut(s)	80
BspT107I	GGYRCC	2 cut(s)	138, 144
BsrDI	GCAATG	2 cut(s)	441, 816
BsrFI	RCCGGY	4 cut(s)	135, 141, 147, 548
BsrI	ACTGG	4 cut(s)	181, 311, 1185, 1765
BssAI	RCCGGY	4 cut(s)	135, 141, 147, 548
BssECI	CCNNGG	3 cut(s)	244, 665, 1901
BssNI	GRCGYC	3 cut(s)	325, 465, 1327
BssSI	CACGAG	1 cut(s)	1377
BssT1I	CCWWGG	1 cut(s)	244
Bst2BI	CACGAG	1 cut(s)	1377
Bst2UI	CCWGG	5 cut(s)	206, 521, 1011, 1787, 1902
Bst4CI	ACNGT	4 cut(s)	384, 702, 721, 1348
Bst6I	CTCTTC	3 cut(s)	109, 1137, 1845
BstACI	GRCGYC	3 cut(s)	325, 465, 1327
BstAPI	GCANNNNNTGC	1 cut(s)	1799
BstBI	TTCGAA	1 cut(s)	80
BstC8I	GCNNGC	6 cut(s)	280, 323, 577, 675, 1783, 1893
BstENI	CCTNNNNNAGG	1 cut(s)	1833
BstF5I	GGATG	6 cut(s)	125, 424, 916, 1129, 1189, 1272
BstH2I	RGCGCY	2 cut(s)	273, 361
BstHHI	GCGC	3 cut(s)	202, 272, 360
BstMAI	GTCTC	4 cut(s)	370, 494, 1157, 1210
BstMWI	GCNNNNNNNGC	6 cut(s)	284, 446, 683, 1193, 1799, 1897
BstNI	CCWGG	5 cut(s)	206, 521, 1011, 1787, 1902
BstSCI	CCNGG	7 cut(s)	204, 519, 537, 665, 1009, 1785, 1900
BstSFI	CTRYAG	3 cut(s)	627, 678, 684
BstSLI	GKGCMC	1 cut(s)	1636
BstV1I	GCAGC	6 cut(s)	409, 433, 539, 670, 682, 698
BstV2I	GAAGAC	4 cut(s)	354, 1134, 1140, 1701
BstX2I	RGATCY	6 cut(s)	708, 922, 1027, 1565, 1606, 1765
BstXI	CCANNNNNNTGG	1 cut(s)	811
BstYI	RGATCY	6 cut(s)	708, 922, 1027, 1565, 1606, 1765
BsuRI	GGCC	4 cut(s)	287, 609, 1683, 1785
BtsCI	GGATG	6 cut(s)	125, 424, 916, 1129, 1189, 1272
BtsI	GCAGTG	1 cut(s)	624
BtsIMutI	CAGTG	4 cut(s)	188, 624, 698, 726
Cac8I	GCNNGC	6 cut(s)	280, 323, 577, 675, 1783, 1893
CaiI	CAGNNNCTG	1 cut(s)	1106
CfoI	GCGC	3 cut(s)	202, 272, 360
Cfr10I	RCCGGY	4 cut(s)	135, 141, 147, 548
Cfr13I	GGNCC	3 cut(s)	208, 598, 1970
CseI	GACGC	2 cut(s)	314, 1316
Csp6I	GTAC	4 cut(s)	757, 1496, 1775, 1957
CviAII	CATG	3 cut(s)	226, 635, 1637
CviQI	GTAC	4 cut(s)	757, 1496, 1775, 1957
DrdI	GACNNNNNNGTC	1 cut(s)	176
DriI	GACNNNNNGTC	1 cut(s)	644
DseDI	GACNNNNNNGTC	1 cut(s)	176
EaeI	YGGCCR	2 cut(s)	1681, 1783
Eam1104I	CTCTTC	3 cut(s)	109, 1137, 1845
Eam1105I	GACNNNNNGTC	1 cut(s)	644
EarI	CTCTTC	3 cut(s)	109, 1137, 1845
Eco130I	CCWWGG	1 cut(s)	244
Eco24I	GRGCYC	1 cut(s)	1644
Eco32I	GATATC	1 cut(s)	1820
Eco47I	GGWCC	3 cut(s)	208, 598, 1970
Eco57I	CTGAAG	3 cut(s)	870, 912, 1128
Eco88I	CYCGRG	2 cut(s)	338, 1724
EcoNI	CCTNNNNNAGG	1 cut(s)	1833
EcoO109I	RGGNCCY	3 cut(s)	208, 598, 1970
EcoRI	GAATTC	1 cut(s)	1096
EcoRII	CCWGG	5 cut(s)	204, 519, 1009, 1785, 1900
EcoRV	GATATC	1 cut(s)	1820
EcoT14I	CCWWGG	1 cut(s)	244
EcoT38I	GRGCYC	1 cut(s)	1644
ErhI	CCWWGG	1 cut(s)	244
Esp3I	CGTCTC	2 cut(s)	370, 494
FaeI	CATG	3 cut(s)	229, 638, 1640
FaqI	GGGAC	5 cut(s)	206, 648, 948, 1286, 1717
FatI	CATG	3 cut(s)	225, 634, 1636
FauI	CCCGC	1 cut(s)	759
FbaI	TGATCA	1 cut(s)	1156
Fnu4HI	GCNGC	7 cut(s)	423, 447, 450, 528, 671, 684, 687
FokI	GGATG	6 cut(s)	112, 431, 923, 1136, 1196, 1259
FriOI	GRGCYC	1 cut(s)	1644
Fsp4HI	GCNGC	7 cut(s)	423, 447, 450, 528, 671, 684, 687
FspBI	CTAG	4 cut(s)	111, 279, 426, 1281
GlaI	GCGC	3 cut(s)	201, 271, 359
GluI	GCNGC	7 cut(s)	423, 447, 450, 528, 671, 684, 687
GsaI	CCCAGC	1 cut(s)	29
GsuI	CTGGAG	1 cut(s)	188
HaeII	RGCGCY	2 cut(s)	273, 361
HaeIII	GGCC	4 cut(s)	287, 609, 1683, 1785
HapII	CCGG	6 cut(s)	136, 142, 148, 538, 549, 667
HgaI	GACGC	2 cut(s)	314, 1316
HhaI	GCGC	3 cut(s)	202, 272, 360
Hin1I	GRCGYC	3 cut(s)	325, 465, 1327
Hin1II	CATG	3 cut(s)	229, 638, 1640
Hin6I	GCGC	3 cut(s)	200, 270, 358
HinP1I	GCGC	3 cut(s)	200, 270, 358
HincII	GTYRAC	2 cut(s)	1427, 1989
HindII	GTYRAC	2 cut(s)	1427, 1989
HpaII	CCGG	6 cut(s)	136, 142, 148, 538, 549, 667
HphI	GGTGA	7 cut(s)	746, 911, 999, 1166, 1523, 1655, 1943
Hpy166II	GTNNAC	6 cut(s)	757, 1427, 1634, 1934, 1989, 2060
Hpy188I	TCNGA	8 cut(s)	121, 169, 931, 951, 1102, 1298, 1399, 1654
Hpy8I	GTNNAC	6 cut(s)	757, 1427, 1634, 1934, 1989, 2060
Hpy99I	CGWCG	5 cut(s)	173, 293, 467, 470, 473
HpyAV	CCTTC	8 cut(s)	55, 108, 171, 589, 976, 1145, 1315, 1486
HpyCH4III	ACNGT	4 cut(s)	384, 702, 721, 1348
HpyCH4IV	ACGT	2 cut(s)	465, 1429
HpyCH4V	TGCA	7 cut(s)	153, 629, 686, 1196, 1229, 1634, 1802
HpyF10VI	GCNNNNNNNGC	6 cut(s)	284, 446, 683, 1193, 1799, 1897
HpySE526I	ACGT	2 cut(s)	465, 1429
Hsp92I	GRCGYC	3 cut(s)	325, 465, 1327
Hsp92II	CATG	3 cut(s)	229, 638, 1640
HspAI	GCGC	3 cut(s)	200, 270, 358
Ksp22I	TGATCA	1 cut(s)	1156
LmnI	GCTCC	6 cut(s)	22, 34, 207, 298, 806, 1299
Lsp1109I	GCAGC	6 cut(s)	409, 433, 539, 670, 682, 698
LweI	GCATC	4 cut(s)	409, 588, 963, 1174
MaeI	CTAG	4 cut(s)	111, 279, 426, 1281
MaeII	ACGT	2 cut(s)	465, 1429
MaeIII	GTNAC	6 cut(s)	378, 515, 622, 881, 1000, 1379
MflI	RGATCY	6 cut(s)	708, 922, 1027, 1565, 1606, 1765
MhlI	GDGCHC	2 cut(s)	1636, 1644
MlsI	TGGCCA	2 cut(s)	1683, 1785
MluCI	AATT	6 cut(s)	1089, 1096, 1197, 1224, 1288, 2005
MluNI	TGGCCA	2 cut(s)	1683, 1785
MlyI	GAGTC	7 cut(s)	167, 188, 228, 630, 930, 1308, 1678
MmeI	TCCRAC	3 cut(s)	44, 192, 1399
Mox20I	TGGCCA	2 cut(s)	1683, 1785
MroXI	GAANNNNTTC	1 cut(s)	1659
MscI	TGGCCA	2 cut(s)	1683, 1785
MseI	TTAA	7 cut(s)	716, 761, 1233, 1362, 1613, 1751, 1962
MslI	CAYNNNNRTG	1 cut(s)	1589
Msp20I	TGGCCA	2 cut(s)	1683, 1785
MspA1I	CMGCKG	3 cut(s)	683, 689, 1781
MspI	CCGG	6 cut(s)	136, 142, 148, 538, 549, 667
MspR9I	CCNGG	7 cut(s)	206, 521, 539, 667, 1011, 1787, 1902
Mva1269I	GAATGC	1 cut(s)	1793
MvaI	CCWGG	5 cut(s)	206, 521, 1011, 1787, 1902
MwoI	GCNNNNNNNGC	6 cut(s)	284, 446, 683, 1193, 1799, 1897
NciI	CCSGG	2 cut(s)	539, 667
NheI	GCTAGC	1 cut(s)	278
NlaIII	CATG	3 cut(s)	229, 638, 1640
NlaIV	GGNNCC	8 cut(s)	140, 146, 158, 300, 600, 1567, 1713, 1767
NmuCI	GTSAC	5 cut(s)	378, 622, 881, 1000, 1379
NspV	TTCGAA	1 cut(s)	80
PaeR7I	CTCGAG	2 cut(s)	338, 1724
PcsI	WCGNNNNNNNCGW	1 cut(s)	1915
PctI	GAATGC	1 cut(s)	1793
PdmI	GAANNNNTTC	1 cut(s)	1659
PfeI	GAWTC	7 cut(s)	122, 785, 832, 842, 970, 1373, 1483
PflFI	GACNNNGTC	2 cut(s)	176, 467
PflMI	CCANNNNNTGG	1 cut(s)	1616
PfoI	TCCNGGA	2 cut(s)	204, 537
PkrI	GCNGC	7 cut(s)	424, 448, 451, 529, 672, 685, 688
PleI	GAGTC	7 cut(s)	167, 188, 228, 629, 930, 1307, 1677
PpsI	GAGTC	7 cut(s)	167, 188, 228, 629, 930, 1307, 1677
PpuMI	RGGWCCY	3 cut(s)	208, 598, 1970
PshBI	ATTAAT	1 cut(s)	1362
Psp5II	RGGWCCY	3 cut(s)	208, 598, 1970
Psp6I	CCWGG	5 cut(s)	204, 519, 1009, 1785, 1900
PspFI	CCCAGC	1 cut(s)	25
PspGI	CCWGG	5 cut(s)	204, 519, 1009, 1785, 1900
PspN4I	GGNNCC	8 cut(s)	140, 146, 158, 300, 600, 1567, 1713, 1767
PspPI	GGNCC	3 cut(s)	208, 598, 1970
PspPPI	RGGWCCY	3 cut(s)	208, 598, 1970
PspXI	VCTCGAGB	2 cut(s)	338, 1724
PstI	CTGCAG	2 cut(s)	631, 688
PstNI	CAGNNNCTG	1 cut(s)	1106
PsuI	RGATCY	6 cut(s)	708, 922, 1027, 1565, 1606, 1765
PsyI	GACNNNGTC	2 cut(s)	176, 467
PvuII	CAGCTG	3 cut(s)	683, 689, 1781
RsaI	GTAC	4 cut(s)	758, 1497, 1776, 1958
RsaNI	GTAC	4 cut(s)	757, 1496, 1775, 1957
RseI	CAYNNNNRTG	1 cut(s)	1589
SaqAI	TTAA	7 cut(s)	716, 761, 1233, 1362, 1613, 1751, 1962
SatI	GCNGC	7 cut(s)	423, 447, 450, 528, 671, 684, 687
Sau96I	GGNCC	3 cut(s)	208, 598, 1970
SchI	GAGTC	7 cut(s)	167, 188, 228, 630, 930, 1308, 1678
ScrFI	CCNGG	7 cut(s)	206, 521, 539, 667, 1011, 1787, 1902
SduI	GDGCHC	2 cut(s)	1636, 1644
SfaNI	GCATC	4 cut(s)	409, 588, 963, 1174
SfcI	CTRYAG	3 cut(s)	627, 678, 684
Sfr274I	CTCGAG	2 cut(s)	338, 1724
SfuI	TTCGAA	1 cut(s)	80
SinI	GGWCC	3 cut(s)	208, 598, 1970
SlaI	CTCGAG	2 cut(s)	338, 1724
SmiMI	CAYNNNNRTG	1 cut(s)	1589
SmlI	CTYRAG	6 cut(s)	338, 374, 431, 958, 1602, 1724
SmoI	CTYRAG	6 cut(s)	338, 374, 431, 958, 1602, 1724
Sse9I	AATT	6 cut(s)	1089, 1096, 1197, 1224, 1288, 2005
SsiI	CCGC	3 cut(s)	75, 450, 766
SspMI	CTAG	4 cut(s)	111, 279, 426, 1281
StyD4I	CCNGG	7 cut(s)	204, 519, 537, 665, 1009, 1785, 1900
StyI	CCWWGG	1 cut(s)	244
TaaI	ACNGT	4 cut(s)	384, 702, 721, 1348
TaiI	ACGT	2 cut(s)	468, 1432
TaqI	TCGA	9 cut(s)	80, 237, 339, 345, 391, 1725, 1870, 1918, 1926
TasI	AATT	6 cut(s)	1089, 1096, 1197, 1224, 1288, 2005
TatI	WGTACW	2 cut(s)	756, 1956
TauI	GCSGC	1 cut(s)	452
TfiI	GAWTC	7 cut(s)	122, 785, 832, 842, 970, 1373, 1483
Tru1I	TTAA	7 cut(s)	716, 761, 1233, 1362, 1613, 1751, 1962
Tru9I	TTAA	7 cut(s)	716, 761, 1233, 1362, 1613, 1751, 1962
TscAI	CASTG	4 cut(s)	188, 631, 705, 726
TseFI	GTSAC	5 cut(s)	378, 622, 881, 1000, 1379
TseI	GCWGC	6 cut(s)	422, 446, 527, 670, 683, 686
Tsp45I	GTSAC	5 cut(s)	378, 622, 881, 1000, 1379
TspDTI	ATGAA	8 cut(s)	114, 242, 1086, 1101, 1140, 1456, 1532, 1749
TspGWI	ACGGA	1 cut(s)	1787
TspRI	CASTG	4 cut(s)	188, 631, 705, 726
Tth111I	GACNNNGTC	2 cut(s)	176, 467
Van91I	CCANNNNNTGG	1 cut(s)	1616
VneI	GTGCAC	1 cut(s)	1632
VpaK11BI	GGWCC	3 cut(s)	208, 598, 1970
VspI	ATTAAT	1 cut(s)	1362
XagI	CCTNNNNNAGG	1 cut(s)	1833
XapI	RAATTY	2 cut(s)	1096, 1288
XbaI	TCTAGA	1 cut(s)	110
XhoI	CTCGAG	2 cut(s)	338, 1724
XmnI	GAANNNNTTC	1 cut(s)	1659
XspI	CTAG	4 cut(s)	111, 279, 426, 1281
ZraI	GACGTC	1 cut(s)	466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.