Rw6G015060

Protein EXECUTER 1, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
28247267 .. 28250804
3538 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G015060.1

Sequence Viewer

Length: 1122 bp
ATGGCTTCCATCTCTGCTCCAACCCCAGCTCCTCACAACCTTACCTTCCCCAACGCCAAATCCTACCCCTCCTCCGCTTCGAAAACCCCATTGTACCCTTCCTCTTCCTCTAGATTCTCCGATTCATCCCTCTGCCGGTGCCGGAACCCTTCCTCCTCCGACTCAGTCCATTGGAGATGGGACTCTGCGCTCCAGGACCTCGTCAAAAACGCCATGAAACGACTCGATTTCCAAGGAGGAGGAAGCGCTAGCAAGGCCGACGAGGAGGAGCCCGACTGGGATTGGGATCGCTGGCGTCAGCATTTCCTCGAGGTCGAAGACCAAGAGCGCCTCGTCTCACTTCTCAAGTCACAGTTGGGTCGAGCTGTAAATGTAGAGGATTTTGAGGATGCTGCTAGGCTCAAGGTTGCCATTGCTGCCGCCTCCACAAACGACGTCGTCGGCTCAGTCATTTCTCGTCTCAATAGAGCTATACAGGACGAGCGTTACCAGGAAGCTGCATTTTTCCGGGATAATGCCGGTGCTGGATTGGTGGGTTGGTGGGCTGGCATCTCTAAGGATAAGAAGGACCCTCACGGCCTAATTATACGAGTAACGGCAGAGCATGGACGATATGTCGCAAGGAGTTATAGTCCCCGGCAGCTCGCTACAGCTGCAGCTGGTGTTCCACTGTTTGAGATCTTTTTAACAGTGAATAAAAAGGGTGAATACAAACAACAGGCTGTGTACTTAAAGCGGGGAGGAGTATTTCCAGATTCTCCACAAGTTAGCTCCAAAGCAATGGACACCACTACCACCTTGAATCCTTTAGATTCAACTGAAGAAAAAAGCGATCTATTTCTTGGAGGTAGCGACGATACTGAAGATGGTGATGATATGGATGATGATTTGGATCTTTCTGAGGGACTCTCTGGATTCCAGAGCATCTTGAGGGATATGATTCCTAATGTGAAGGTCAAGGTCTTGAAAGTGACATCACCAGGAAAGGTAGATCGGGATCTAATATCTAAAGTGATTGAGCAGATCATCGAGGAAGATGATGAAGATAAGGATAATGAAATCAAGAATTCAGAAGCTGAAGATGAAGATGAAGATGAGGACGAGAGACGAAGAAAAGGTTGA

Protein Analysis

373

Amino Acids

41.45

Weight (kDa)

4.75

Isoelectric Point (pI)

51.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 438
AbsI CCTCGAGG 1 cut(s) 308
AccB1I GGYRCC 1 cut(s) 138
AciI CCGC 3 cut(s) 75, 420, 736
AclWI GGATC 3 cut(s) 294, 900, 1005
AcsI RAATTY 1 cut(s) 1066
AcuI CTGAAG 3 cut(s) 840, 882, 1098
AcyI GRCGYC 2 cut(s) 295, 435
AfaI GTAC 2 cut(s) 95, 728
AfeI AGCGCT 1 cut(s) 247
AfiI CCNNNNNNNGG 1 cut(s) 135
AgsI TTSAA 3 cut(s) 802, 816, 967
AhdI GACNNNNNGTC 1 cut(s) 614
AjnI CCWGG 3 cut(s) 192, 489, 979
AloI GAACNNNNNNTCC 2 cut(s) 137, 169
AluBI AGCT 9 cut(s) 29, 365, 470, 497, 643, 653, 659, 771, 1076
AluI AGCT 9 cut(s) 29, 365, 470, 497, 643, 653, 659, 771, 1076
Alw26I GTCTC 3 cut(s) 340, 464, 1099
AlwI GGATC 3 cut(s) 294, 900, 1005
AlwNI CAGNNNCTG 1 cut(s) 1076
Ama87I CYCGRG 1 cut(s) 308
Aor51HI AGCGCT 1 cut(s) 247
AoxI GGCC 2 cut(s) 255, 577
ApeKI GCWGC 6 cut(s) 392, 416, 497, 640, 653, 656
ApoI RAATTY 1 cut(s) 1066
AspLEI GCGC 3 cut(s) 190, 248, 330
AspS9I GGNCC 2 cut(s) 196, 568
AsuC2I CCSGG 2 cut(s) 509, 637
AsuHPI GGTGA 3 cut(s) 716, 881, 969
AsuII TTCGAA 1 cut(s) 80
AsuNHI GCTAGC 1 cut(s) 248
AvaI CYCGRG 1 cut(s) 308
AvaII GGWCC 2 cut(s) 196, 568
BanI GGYRCC 1 cut(s) 138
BanII GRGCYC 1 cut(s) 273
BbsI GAAGAC 1 cut(s) 324
BbvI GCAGC 6 cut(s) 379, 403, 484, 640, 652, 668
BccI CCATC 3 cut(s) 17, 171, 860
BceAI ACGGC 2 cut(s) 592, 612
BciT130I CCWGG 3 cut(s) 194, 491, 981
BcnI CCSGG 2 cut(s) 509, 637
BcoDI GTCTC 3 cut(s) 340, 464, 1099
BfaI CTAG 3 cut(s) 111, 249, 396
BfmI CTRYAG 2 cut(s) 648, 654
BfoI RGCGCY 2 cut(s) 249, 331
BglII AGATCT 1 cut(s) 678
BisI GCNGC 7 cut(s) 393, 417, 420, 498, 641, 654, 657
BlsI GCNGC 7 cut(s) 394, 418, 421, 499, 642, 655, 658
Bme1390I CCNGG 5 cut(s) 194, 491, 509, 637, 981
Bme18I GGWCC 2 cut(s) 196, 568
BmeRI GACNNNNNGTC 1 cut(s) 614
BmeT110I CYCGRG 1 cut(s) 308
BmgT120I GGNCC 2 cut(s) 196, 568
BmiI GGNNCC 4 cut(s) 140, 146, 270, 570
BmrFI CCNGG 5 cut(s) 194, 491, 509, 637, 981
BmrI ACTGGG 1 cut(s) 286
BmsI GCATC 3 cut(s) 379, 558, 933
BmtI GCTAGC 1 cut(s) 252
BmuI ACTGGG 1 cut(s) 286
BpiI GAAGAC 1 cut(s) 324
BplI GAGNNNNNCTC 2 cut(s) 893, 925
BpmI CTGGAG 1 cut(s) 176
Bpu14I TTCGAA 1 cut(s) 80
BpuEI CTTGAG 3 cut(s) 329, 386, 949
BpuMI CCSGG 2 cut(s) 509, 637
BsaBI GATNNNNATC 3 cut(s) 285, 891, 996
BsaHI GRCGYC 2 cut(s) 295, 435
BsaJI CCNNGG 2 cut(s) 232, 635
BsaXI ACNNNNNCTCC 8 cut(s) 13, 43, 56, 86, 137, 167, 616, 646
Bsc4I CCNNNNNNNGG 1 cut(s) 135
Bse118I RCCGGY 2 cut(s) 135, 518
Bse1I ACTGG 1 cut(s) 281
Bse3DI GCAATG 2 cut(s) 411, 786
Bse8I GATNNNNATC 3 cut(s) 285, 891, 996
BseBI CCWGG 3 cut(s) 194, 491, 981
BseDI CCNNGG 2 cut(s) 232, 635
BseGI GGATG 3 cut(s) 125, 394, 886
BseJI GATNNNNATC 3 cut(s) 285, 891, 996
BseLI CCNNNNNNNGG 1 cut(s) 135
BseMI GCAATG 2 cut(s) 411, 786
BseMII CTCAG 3 cut(s) 177, 459, 891
BseNI ACTGG 1 cut(s) 281
BseRI GAGGAG 7 cut(s) 21, 61, 145, 252, 278, 281, 756
BseXI GCAGC 6 cut(s) 379, 403, 484, 640, 652, 668
BseYI CCCAGC 1 cut(s) 25
BshFI GGCC 2 cut(s) 257, 579
BshNI GGYRCC 1 cut(s) 138
BsiHKCI CYCGRG 1 cut(s) 308
BsiSI CCGG 5 cut(s) 136, 142, 508, 519, 637
BslFI GGGAC 3 cut(s) 194, 618, 918
BslI CCNNNNNNNGG 1 cut(s) 135
BsmAI GTCTC 3 cut(s) 340, 464, 1099
BsmBI CGTCTC 3 cut(s) 340, 464, 1099
BsmFI GGGAC 3 cut(s) 194, 618, 918
BsnI GGCC 2 cut(s) 257, 579
BsoBI CYCGRG 1 cut(s) 308
Bsp119I TTCGAA 1 cut(s) 80
Bsp1286I GDGCHC 1 cut(s) 273
Bsp143I GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
BspACI CCGC 3 cut(s) 75, 420, 736
BspANI GGCC 2 cut(s) 257, 579
BspCNI CTCAG 3 cut(s) 176, 458, 892
BspLI GGNNCC 4 cut(s) 140, 146, 270, 570
BspMAI CTGCAG 1 cut(s) 658
BspOI GCTAGC 1 cut(s) 252
BspPI GGATC 3 cut(s) 294, 900, 1005
BspT104I TTCGAA 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 138
BsrDI GCAATG 2 cut(s) 411, 786
BsrFI RCCGGY 2 cut(s) 135, 518
BsrI ACTGG 1 cut(s) 281
BssAI RCCGGY 2 cut(s) 135, 518
BssECI CCNNGG 2 cut(s) 232, 635
BssMI GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
BssNI GRCGYC 2 cut(s) 295, 435
BssT1I CCWWGG 1 cut(s) 232
Bst2UI CCWGG 3 cut(s) 194, 491, 981
Bst4CI ACNGT 3 cut(s) 354, 672, 691
Bst6I CTCTTC 1 cut(s) 109
BstACI GRCGYC 2 cut(s) 295, 435
BstBI TTCGAA 1 cut(s) 80
BstC8I GCNNGC 4 cut(s) 250, 293, 547, 645
BstDEI CTNAG 4 cut(s) 163, 445, 555, 900
BstF5I GGATG 3 cut(s) 125, 394, 886
BstH2I RGCGCY 2 cut(s) 249, 331
BstHHI GCGC 3 cut(s) 190, 248, 330
BstKTI GATC 7 cut(s) 289, 681, 835, 895, 994, 1000, 1026
BstMAI GTCTC 3 cut(s) 340, 464, 1099
BstMBI GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
BstMWI GCNNNNNNNGC 3 cut(s) 254, 416, 653
BstNI CCWGG 3 cut(s) 194, 491, 981
BstSCI CCNGG 5 cut(s) 192, 489, 507, 635, 979
BstSFI CTRYAG 2 cut(s) 648, 654
BstV1I GCAGC 6 cut(s) 379, 403, 484, 640, 652, 668
BstV2I GAAGAC 1 cut(s) 324
BstX2I RGATCY 3 cut(s) 678, 892, 997
BstXI CCANNNNNNTGG 1 cut(s) 781
BstYI RGATCY 3 cut(s) 678, 892, 997
BsuRI GGCC 2 cut(s) 257, 579
BtsCI GGATG 3 cut(s) 125, 394, 886
BtsIMutI CAGTG 2 cut(s) 668, 696
Cac8I GCNNGC 4 cut(s) 250, 293, 547, 645
CaiI CAGNNNCTG 1 cut(s) 1076
CfoI GCGC 3 cut(s) 190, 248, 330
Cfr10I RCCGGY 2 cut(s) 135, 518
Cfr13I GGNCC 2 cut(s) 196, 568
CseI GACGC 1 cut(s) 284
Csp6I GTAC 2 cut(s) 94, 727
CviAII CATG 2 cut(s) 214, 605
CviQI GTAC 2 cut(s) 94, 727
DdeI CTNAG 4 cut(s) 163, 445, 555, 900
DpnI GATC 7 cut(s) 288, 680, 834, 894, 993, 999, 1025
DpnII GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
DriI GACNNNNNGTC 1 cut(s) 614
Eam1104I CTCTTC 1 cut(s) 109
Eam1105I GACNNNNNGTC 1 cut(s) 614
EarI CTCTTC 1 cut(s) 109
Eco130I CCWWGG 1 cut(s) 232
Eco24I GRGCYC 1 cut(s) 273
Eco47I GGWCC 2 cut(s) 196, 568
Eco47III AGCGCT 1 cut(s) 247
Eco57I CTGAAG 3 cut(s) 840, 882, 1098
Eco88I CYCGRG 1 cut(s) 308
EcoO109I RGGNCCY 2 cut(s) 196, 568
EcoRI GAATTC 1 cut(s) 1066
EcoRII CCWGG 3 cut(s) 192, 489, 979
EcoT14I CCWWGG 1 cut(s) 232
EcoT38I GRGCYC 1 cut(s) 273
ErhI CCWWGG 1 cut(s) 232
Esp3I CGTCTC 3 cut(s) 340, 464, 1099
FaeI CATG 2 cut(s) 217, 608
FaiI YATR 8 cut(s) 215, 473, 587, 606, 615, 630, 878, 938
FaqI GGGAC 3 cut(s) 194, 618, 918
FatI CATG 2 cut(s) 213, 604
FauI CCCGC 1 cut(s) 729
Fnu4HI GCNGC 7 cut(s) 393, 417, 420, 498, 641, 654, 657
FokI GGATG 3 cut(s) 112, 401, 893
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 7 cut(s) 393, 417, 420, 498, 641, 654, 657
FspBI CTAG 3 cut(s) 111, 249, 396
GlaI GCGC 3 cut(s) 189, 247, 329
GluI GCNGC 7 cut(s) 393, 417, 420, 498, 641, 654, 657
GsaI CCCAGC 1 cut(s) 29
GsuI CTGGAG 1 cut(s) 176
HaeII RGCGCY 2 cut(s) 249, 331
HaeIII GGCC 2 cut(s) 257, 579
HapII CCGG 5 cut(s) 136, 142, 508, 519, 637
HgaI GACGC 1 cut(s) 284
HhaI GCGC 3 cut(s) 190, 248, 330
Hin1I GRCGYC 2 cut(s) 295, 435
Hin1II CATG 2 cut(s) 217, 608
Hin6I GCGC 3 cut(s) 188, 246, 328
HinP1I GCGC 3 cut(s) 188, 246, 328
HpaII CCGG 5 cut(s) 136, 142, 508, 519, 637
HphI GGTGA 3 cut(s) 716, 881, 969
Hpy166II GTNNAC 1 cut(s) 727
Hpy188I TCNGA 4 cut(s) 121, 160, 901, 1072
Hpy188III TCNNGA 8 cut(s) 111, 752, 912, 919, 928, 964, 995, 1063
Hpy8I GTNNAC 1 cut(s) 727
Hpy99I CGWCG 5 cut(s) 263, 437, 440, 443, 857
HpyAV CCTTC 5 cut(s) 55, 108, 159, 559, 946
HpyCH4III ACNGT 3 cut(s) 354, 672, 691
HpyCH4IV ACGT 1 cut(s) 435
HpyCH4V TGCA 2 cut(s) 500, 656
HpyF10VI GCNNNNNNNGC 3 cut(s) 254, 416, 653
HpyF3I CTNAG 4 cut(s) 163, 445, 555, 900
HpySE526I ACGT 1 cut(s) 435
Hsp92I GRCGYC 2 cut(s) 295, 435
Hsp92II CATG 2 cut(s) 217, 608
HspAI GCGC 3 cut(s) 188, 246, 328
Kzo9I GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
LmnI GCTCC 5 cut(s) 22, 34, 195, 268, 776
Lsp1109I GCAGC 6 cut(s) 379, 403, 484, 640, 652, 668
LweI GCATC 3 cut(s) 379, 558, 933
MaeI CTAG 3 cut(s) 111, 249, 396
MaeII ACGT 1 cut(s) 435
MaeIII GTNAC 4 cut(s) 348, 485, 592, 970
MalI GATC 7 cut(s) 288, 680, 834, 894, 993, 999, 1025
MboI GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
MflI RGATCY 3 cut(s) 678, 892, 997
MhlI GDGCHC 1 cut(s) 273
MluCI AATT 2 cut(s) 582, 1066
MlyI GAGTC 4 cut(s) 155, 176, 216, 900
MmeI TCCRAC 2 cut(s) 44, 183
MseI TTAA 2 cut(s) 686, 731
MspA1I CMGCKG 2 cut(s) 653, 659
MspI CCGG 5 cut(s) 136, 142, 508, 519, 637
MspR9I CCNGG 5 cut(s) 194, 491, 509, 637, 981
MvaI CCWGG 3 cut(s) 194, 491, 981
MwoI GCNNNNNNNGC 3 cut(s) 254, 416, 653
NciI CCSGG 2 cut(s) 509, 637
NdeII GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
NheI GCTAGC 1 cut(s) 248
NlaIII CATG 2 cut(s) 217, 608
NlaIV GGNNCC 4 cut(s) 140, 146, 270, 570
NmuCI GTSAC 2 cut(s) 348, 970
NspV TTCGAA 1 cut(s) 80
PaeR7I CTCGAG 1 cut(s) 308
PfeI GAWTC 7 cut(s) 114, 122, 755, 802, 812, 915, 940
PflFI GACNNNGTC 3 cut(s) 164, 200, 437
PfoI TCCNGGA 2 cut(s) 192, 507
PkrI GCNGC 7 cut(s) 394, 418, 421, 499, 642, 655, 658
PleI GAGTC 4 cut(s) 155, 176, 216, 900
PpsI GAGTC 4 cut(s) 155, 176, 216, 900
PpuMI RGGWCCY 2 cut(s) 196, 568
Psp5II RGGWCCY 2 cut(s) 196, 568
Psp6I CCWGG 3 cut(s) 192, 489, 979
PspFI CCCAGC 1 cut(s) 25
PspGI CCWGG 3 cut(s) 192, 489, 979
PspN4I GGNNCC 4 cut(s) 140, 146, 270, 570
PspPI GGNCC 2 cut(s) 196, 568
PspPPI RGGWCCY 2 cut(s) 196, 568
PspXI VCTCGAGB 1 cut(s) 308
PstI CTGCAG 1 cut(s) 658
PstNI CAGNNNCTG 1 cut(s) 1076
PsuI RGATCY 3 cut(s) 678, 892, 997
PsyI GACNNNGTC 3 cut(s) 164, 200, 437
PvuII CAGCTG 2 cut(s) 653, 659
RsaI GTAC 2 cut(s) 95, 728
RsaNI GTAC 2 cut(s) 94, 727
SaqAI TTAA 2 cut(s) 686, 731
SatI GCNGC 7 cut(s) 393, 417, 420, 498, 641, 654, 657
Sau3AI GATC 7 cut(s) 286, 678, 832, 892, 991, 997, 1023
Sau96I GGNCC 2 cut(s) 196, 568
SchI GAGTC 4 cut(s) 155, 176, 216, 900
ScrFI CCNGG 5 cut(s) 194, 491, 509, 637, 981
SduI GDGCHC 1 cut(s) 273
SfaNI GCATC 3 cut(s) 379, 558, 933
SfcI CTRYAG 2 cut(s) 648, 654
Sfr274I CTCGAG 1 cut(s) 308
SfuI TTCGAA 1 cut(s) 80
SinI GGWCC 2 cut(s) 196, 568
SlaI CTCGAG 1 cut(s) 308
SmlI CTYRAG 4 cut(s) 308, 344, 401, 928
SmoI CTYRAG 4 cut(s) 308, 344, 401, 928
Sse9I AATT 2 cut(s) 582, 1066
SsiI CCGC 3 cut(s) 75, 420, 736
SspMI CTAG 3 cut(s) 111, 249, 396
StyD4I CCNGG 5 cut(s) 192, 489, 507, 635, 979
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 3 cut(s) 354, 672, 691
TaiI ACGT 1 cut(s) 438
TaqI TCGA 6 cut(s) 80, 225, 309, 315, 361, 1029
TasI AATT 2 cut(s) 582, 1066
TatI WGTACW 1 cut(s) 726
TauI GCSGC 1 cut(s) 422
TfiI GAWTC 7 cut(s) 114, 122, 755, 802, 812, 915, 940
Tru1I TTAA 2 cut(s) 686, 731
Tru9I TTAA 2 cut(s) 686, 731
TscAI CASTG 2 cut(s) 675, 696
TseFI GTSAC 2 cut(s) 348, 970
TseI GCWGC 6 cut(s) 392, 416, 497, 640, 653, 656
Tsp45I GTSAC 2 cut(s) 348, 970
TspDTI ATGAA 6 cut(s) 114, 230, 1056, 1071, 1098, 1104
TspRI CASTG 2 cut(s) 675, 696
Tth111I GACNNNGTC 3 cut(s) 164, 200, 437
VpaK11BI GGWCC 2 cut(s) 196, 568
XapI RAATTY 1 cut(s) 1066
XbaI TCTAGA 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 308
XspI CTAG 3 cut(s) 111, 249, 396
ZraI GACGTC 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.