Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0008070

Physical Location & Seq

Genomic Coordinates Reverse (-)

11589855 .. 11593878

Gene Structure 4024 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1065100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGCTCTCTGCCCCAGTTGCTTCATCCTCCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTGTCTCTCATCATCTTAAATCTCTCTCTAATAATTCCGGCTATTTCTTTGTCAGAATCCGGCCAACCCTTTCTTCGTCTTTATATATACCTAACCCCCTCCCTCTCCTCTTTAGCTTTCTCTCACATTTCCATCTCTCTCTCTCTCTCCCTCTCTCTCCAACTGCTCCAATACCATCATCCACCAGCTCCCATTACACACTACTACTACTTTATGATCAAAACCTTGCCTATAAAACTCCAAAATGTATTGGGCATGAGGTAATAATCCTAACCAATCTCACCACATTTTCCAAAACTAATCACTACCCATTATCCAGACCCCGAAAGTATTACTACCCATCAATTGTTTCCCCTTCGATTTCTGGTCACATAGCTAGATTTCAGAGGTTCCCAAAATCTGTGTGTGTTTTTGTCTGTGTGATGAACAGAGCCTCACCGGAGATGTTGAACTGTATGAACGCGCCGGGGACCTTCATCGCCGGAAACTGTACCGACATGACGGTGATGGAGAAGCAGAGGGACCGGATGAAGTGGCAGCAGAGCGACTTTCATGATCAACAAATTCAGTATAATTTTGGCGGGAGCGAGCATAGTGGGGTGTTCTCCCTTCCAATTCATGCTCAGGGGTTTCACGGTTTTCTGGGTGGTAACCCGGCAGTGAAACCCGACCCGAGTTCGGAAAACCGGTGGGTAGAATTGGGTTTCGGGTCTTGTGGTTTGGTCATGAATAATAATGGAACTGCAGGGTTGGAAGAGAGGGGTAATGTTCTCAATAACAACATTTCCAGGACTTTTAGTTGCTCGCCCACTGTAGCCGCTGAGAACAAGTCAAGCGACACCGTTTTGTCTCAAAAGCTTAGCTTGCCGGCCGGGAAGGAAAGCTCTAAAAAGAGGAAGGCTGATAAGGTGCAGAGCAATAAGGCTGCAACTGCAGAAAGTGATAGCACTGAGAAGAGAATGAAAAGTTGTGCAGAGGAAGGGGACTCCAAGATCACAGAGCAAATCAGCACCAAGAACAACGACAAAGAATCTTCTGCTGATACTTCAAAGGACAATTCAAAAGCTTCTGAGGTTCAAAAGCTTGATTACATCCATGTCCGCGCGCGGCGAGGTCAGGCCACTGATAGCCACAGCTTGGCTGAGAGGGTTAGGAGGGAAAAAATCAGTGAACGAATGAAGTATCTGCAAGATTTGGTGCCAGGATGCAACAAGATAACTGGCAAGGCCGGCATGCTTGATGAAATCATCAATTATGTTCAGTCTCTCCAACGACAAGTAGAGTTCCTGTCTATGAAACTAGCTGCTGTGAATCCGAGGCTTCACTTCAACATCGATGACTTGTTTGCAAAAGAGATGCTTCCTACGTGCGCGGCCAATTTTCAGACGATTGGTATGTCATCAGAAATGACCAATTCTGCGTATCTTCAGCTGAATCCAATGCAACAATTGGCATCTTGTGGGTTGGATATGGGGTTAAATTCCACTGATTTGGCGCTTCAAAGAGCTATAAGAGCTCCTGGTTCGATCCCTGAACCATTTCTTGACACATCCTGTTTCACTAACATTTTCAATGTGGAATTTCAACAAGGAAGATCATCCTTTCAATCGCAACCATTTACAGGTTCCATTGAAGGTAGCAATTTAAAGATGGAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

573

Amino Acids

63.32

Weight (kDa)

8.71

Isoelectric Point (pI)

51.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	396 - 443	8.7e-07	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008070)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34530
fragaria_vesca	FvH4_2g09030 FvH4_2g09030
malus_domestica	MD05G1065100.v1.1 MD10G1074000.v1.1
prunus_persica	Prupe.8G095700_v2.0.a1 Prupe.8G095700_v2.0.a1 Prupe.8G095700_v2.0.a1 Prupe.8G095700_v2.0.a1 Prupe.8G095700_v2.0.a1 Prupe.8G095700_v2.0.a1
pyrus_communis	pycom05g05640 pycom10g05820
rosa_chinensis	RchiOBHm_Chr6g0264701
rosa_laevigata	RLG00000014234
rosa_multiflora	Rmu_sc0000546.1_g000026
rosa_roxburghii	Rroxscaffold_175G00432010 Rroxscaffold_7G00203210
rosa_rugosa	Rorug06G0014800
rosa_samantha	Rh6AG134300 Rh6BG132000 Rh6CG130600 Rh6DG117600
rosa_wichuraiana	Rw6G011640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1255
AccB7I	CCANNNNNTGG	1 cut(s)	1195
AccII	CGCG	5 cut(s)	521, 1161, 1163, 1165, 1430
AciI	CCGC	5 cut(s)	639, 876, 1159, 1165, 1430
AclWI	GGATC	1 cut(s)	1579
AcoI	YGGCCR	3 cut(s)	119, 927, 1431
AcsI	RAATTY	3 cut(s)	621, 1537, 1637
AcuI	CTGAAG	1 cut(s)	1469
AfaI	GTAC	1 cut(s)	550
AfiI	CCNNNNNNNGG	3 cut(s)	736, 1195, 1679
AgeI	ACCGGT	1 cut(s)	744
AjnI	CCWGG	3 cut(s)	845, 1258, 1576
AjuI	GAANNNNNNNTTGG	2 cut(s)	115, 147
Alw21I	GWGCWC	1 cut(s)	1576
Alw26I	GTCTC	3 cut(s)	67, 912, 1326
AlwI	GGATC	1 cut(s)	1579
Ama87I	CYCGRG	1 cut(s)	730
AoxI	GGCC	5 cut(s)	119, 927, 1176, 1284, 1431
ApeKI	GCWGC	3 cut(s)	595, 983, 1361
ApoI	RAATTY	3 cut(s)	621, 1537, 1637
AsiGI	ACCGGT	1 cut(s)	744
Asp700I	GAANNNNTTC	1 cut(s)	1596
AspLEI	GCGC	5 cut(s)	523, 1163, 1165, 1430, 1555
AspS9I	GGNCC	2 cut(s)	528, 580
AsuC2I	CCSGG	3 cut(s)	525, 713, 931
AsuHPI	GGTGA	3 cut(s)	331, 486, 574
AvaI	CYCGRG	1 cut(s)	730
AvaII	GGWCC	2 cut(s)	528, 580
BanI	GGYRCC	1 cut(s)	1255
BanII	GRGCYC	1 cut(s)	1576
Bbv12I	GWGCWC	1 cut(s)	1576
BbvI	GCAGC	3 cut(s)	607, 970, 1348
BccI	CCATC	5 cut(s)	198, 241, 406, 559, 1702
BciT130I	CCWGG	3 cut(s)	847, 1260, 1578
BclI	TGATCA	2 cut(s)	274, 613
BcnI	CCSGG	3 cut(s)	525, 713, 931
BcoDI	GTCTC	3 cut(s)	67, 912, 1326
BfaI	CTAG	2 cut(s)	435, 1358
BfmI	CTRYAG	3 cut(s)	801, 870, 990
BfoI	RGCGCY	1 cut(s)	1556
BisI	GCNGC	6 cut(s)	596, 876, 984, 1166, 1362, 1431
BlpI	GCTNAGC	1 cut(s)	917
BlsI	GCNGC	6 cut(s)	597, 877, 985, 1167, 1363, 1432
Bme1390I	CCNGG	6 cut(s)	525, 713, 847, 931, 1260, 1578
Bme18I	GGWCC	2 cut(s)	528, 580
BmeT110I	CYCGRG	1 cut(s)	730
BmgT120I	GGNCC	2 cut(s)	528, 580
BmiI	GGNNCC	5 cut(s)	449, 529, 581, 1257, 1684
BmrFI	CCNGG	6 cut(s)	525, 713, 847, 931, 1260, 1578
BmrI	ACTGGG	1 cut(s)	9
BmsI	GCATC	3 cut(s)	1253, 1404, 1520
BmuI	ACTGGG	1 cut(s)	9
Bpu10I	CCTNAGC	1 cut(s)	681
Bpu1102I	GCTNAGC	1 cut(s)	917
BpuMI	CCSGG	3 cut(s)	525, 713, 931
Bsa29I	ATCGAT	1 cut(s)	1392
BsaAI	YACGTR	1 cut(s)	1425
BsaJI	CCNNGG	2 cut(s)	524, 1373
BsaWI	WCCGGW	3 cut(s)	496, 582, 744
Bsc4I	CCNNNNNNNGG	3 cut(s)	736, 1195, 1679
Bse118I	RCCGGY	3 cut(s)	744, 925, 1286
Bse1I	ACTGG	2 cut(s)	15, 1282
BseBI	CCWGG	3 cut(s)	847, 1260, 1578
BseCI	ATCGAT	1 cut(s)	1392
BseDI	CCNNGG	2 cut(s)	524, 1373
BseGI	GGATG	7 cut(s)	24, 236, 591, 1149, 1268, 1607, 1655
BseLI	CCNNNNNNNGG	3 cut(s)	736, 1195, 1679
BseMII	CTCAG	5 cut(s)	695, 870, 999, 1119, 1191
BseNI	ACTGG	2 cut(s)	15, 1282
BsePI	GCGCGC	1 cut(s)	1161
BseRI	GAGGAG	2 cut(s)	20, 155
BseX3I	CGGCCG	1 cut(s)	927
BseXI	GCAGC	3 cut(s)	607, 970, 1348
BsgI	GTGCAG	2 cut(s)	989, 1050
Bsh1236I	CGCG	5 cut(s)	521, 1161, 1163, 1165, 1430
Bsh1285I	CGRYCG	1 cut(s)	930
BshFI	GGCC	5 cut(s)	121, 929, 1178, 1286, 1433
BshNI	GGYRCC	1 cut(s)	1255
BshTI	ACCGGT	1 cut(s)	744
BshVI	ATCGAT	1 cut(s)	1392
BsiEI	CGRYCG	1 cut(s)	930
BsiHKAI	GWGCWC	1 cut(s)	1576
BsiHKCI	CYCGRG	1 cut(s)	730
BslFI	GGGAC	3 cut(s)	541, 593, 1055
BslI	CCNNNNNNNGG	3 cut(s)	736, 1195, 1679
BsmAI	GTCTC	3 cut(s)	67, 912, 1326
BsmFI	GGGAC	3 cut(s)	541, 593, 1055
BsnI	GGCC	5 cut(s)	121, 929, 1178, 1286, 1433
BsoBI	CYCGRG	1 cut(s)	730
Bsp1286I	GDGCHC	1 cut(s)	1576
Bsp143I	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
Bsp1720I	GCTNAGC	1 cut(s)	917
BspACI	CCGC	5 cut(s)	639, 876, 1159, 1165, 1430
BspANI	GGCC	5 cut(s)	121, 929, 1178, 1286, 1433
BspCNI	CTCAG	5 cut(s)	694, 871, 1000, 1120, 1192
BspDI	ATCGAT	1 cut(s)	1392
BspFNI	CGCG	5 cut(s)	521, 1161, 1163, 1165, 1430
BspHI	TCATGA	2 cut(s)	610, 783
BspLI	GGNNCC	5 cut(s)	449, 529, 581, 1257, 1684
BspMAI	CTGCAG	2 cut(s)	805, 994
BspPI	GGATC	1 cut(s)	1579
BspT107I	GGYRCC	1 cut(s)	1255
BsrFI	RCCGGY	3 cut(s)	744, 925, 1286
BsrI	ACTGG	2 cut(s)	15, 1282
BssAI	RCCGGY	3 cut(s)	744, 925, 1286
BssECI	CCNNGG	2 cut(s)	524, 1373
BssHII	GCGCGC	1 cut(s)	1161
BssMI	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
Bst2UI	CCWGG	3 cut(s)	847, 1260, 1578
Bst4CI	ACNGT	6 cut(s)	512, 548, 562, 695, 871, 901
Bst6I	CTCTTC	2 cut(s)	807, 1007
BstBAI	YACGTR	1 cut(s)	1425
BstC8I	GCNNGC	7 cut(s)	647, 863, 923, 927, 1163, 1288, 1292
BstDEI	CTNAG	6 cut(s)	681, 879, 917, 1008, 1128, 1200
BstEII	GGTNACC	1 cut(s)	707
BstF5I	GGATG	7 cut(s)	24, 236, 591, 1149, 1268, 1607, 1655
BstFNI	CGCG	5 cut(s)	521, 1161, 1163, 1165, 1430
BstH2I	RGCGCY	1 cut(s)	1556
BstHHI	GCGC	5 cut(s)	523, 1163, 1165, 1430, 1555
BstKTI	GATC	5 cut(s)	277, 616, 1053, 1587, 1655
BstMAI	GTCTC	3 cut(s)	67, 912, 1326
BstMBI	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
BstMCI	CGRYCG	1 cut(s)	930
BstMWI	GCNNNNNNNGC	5 cut(s)	18, 922, 989, 1287, 1571
BstNI	CCWGG	3 cut(s)	847, 1260, 1578
BstNSI	RCATGY	1 cut(s)	1294
BstPI	GGTNACC	1 cut(s)	707
BstSCI	CCNGG	6 cut(s)	523, 711, 845, 929, 1258, 1576
BstSFI	CTRYAG	3 cut(s)	801, 870, 990
BstUI	CGCG	5 cut(s)	521, 1161, 1163, 1165, 1430
BstV1I	GCAGC	3 cut(s)	607, 970, 1348
BstXI	CCANNNNNNTGG	1 cut(s)	1549
BstZI	CGGCCG	1 cut(s)	927
Bsu15I	ATCGAT	1 cut(s)	1392
BsuRI	GGCC	5 cut(s)	121, 929, 1178, 1286, 1433
BsuTUI	ATCGAT	1 cut(s)	1392
BtgZI	GCGATG	1 cut(s)	520
BtsCI	GGATG	7 cut(s)	24, 236, 591, 1149, 1268, 1607, 1655
BtsI	GCAGTG	1 cut(s)	723
BtsIMutI	CAGTG	6 cut(s)	723, 867, 1005, 1179, 1231, 1542
Cac8I	GCNNGC	7 cut(s)	647, 863, 923, 927, 1163, 1288, 1292
CciI	TCATGA	2 cut(s)	610, 783
CfoI	GCGC	5 cut(s)	523, 1163, 1165, 1430, 1555
Cfr10I	RCCGGY	3 cut(s)	744, 925, 1286
Cfr13I	GGNCC	2 cut(s)	528, 580
ClaI	ATCGAT	1 cut(s)	1392
Csp6I	GTAC	1 cut(s)	549
CspAI	ACCGGT	1 cut(s)	744
CviAII	CATG	7 cut(s)	314, 556, 611, 677, 784, 1154, 1291
CviQI	GTAC	1 cut(s)	549
DdeI	CTNAG	6 cut(s)	681, 879, 917, 1008, 1128, 1200
DpnI	GATC	5 cut(s)	276, 615, 1052, 1586, 1654
DpnII	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
DraI	TTTAAA	1 cut(s)	1704
EaeI	YGGCCR	3 cut(s)	119, 927, 1431
EagI	CGGCCG	1 cut(s)	927
Eam1104I	CTCTTC	2 cut(s)	807, 1007
EarI	CTCTTC	2 cut(s)	807, 1007
Ecl136II	GAGCTC	1 cut(s)	1574
EclXI	CGGCCG	1 cut(s)	927
Eco24I	GRGCYC	1 cut(s)	1576
Eco47I	GGWCC	2 cut(s)	528, 580
Eco52I	CGGCCG	1 cut(s)	927
Eco53kI	GAGCTC	1 cut(s)	1574
Eco57I	CTGAAG	1 cut(s)	1469
Eco88I	CYCGRG	1 cut(s)	730
Eco91I	GGTNACC	1 cut(s)	707
EcoICRI	GAGCTC	1 cut(s)	1574
EcoO109I	RGGNCCY	1 cut(s)	528
EcoO65I	GGTNACC	1 cut(s)	707
EcoRII	CCWGG	3 cut(s)	845, 1258, 1576
EcoT38I	GRGCYC	1 cut(s)	1576
FaeI	CATG	7 cut(s)	317, 559, 614, 680, 787, 1157, 1294
FalI	AAGNNNNNCTT	4 cut(s)	905, 937, 1401, 1433
FaqI	GGGAC	3 cut(s)	541, 593, 1055
FatI	CATG	7 cut(s)	313, 555, 610, 676, 783, 1153, 1290
FauI	CCCGC	1 cut(s)	632
FbaI	TGATCA	2 cut(s)	274, 613
Fnu4HI	GCNGC	6 cut(s)	596, 876, 984, 1166, 1362, 1431
FokI	GGATG	7 cut(s)	11, 223, 598, 1136, 1275, 1594, 1642
FriOI	GRGCYC	1 cut(s)	1576
Fsp4HI	GCNGC	6 cut(s)	596, 876, 984, 1166, 1362, 1431
FspBI	CTAG	2 cut(s)	435, 1358
GlaI	GCGC	5 cut(s)	522, 1162, 1164, 1429, 1554
GluI	GCNGC	6 cut(s)	596, 876, 984, 1166, 1362, 1431
HaeII	RGCGCY	1 cut(s)	1556
HaeIII	GGCC	5 cut(s)	121, 929, 1178, 1286, 1433
HhaI	GCGC	5 cut(s)	523, 1163, 1165, 1430, 1555
Hin1II	CATG	7 cut(s)	317, 559, 614, 680, 787, 1157, 1294
Hin6I	GCGC	5 cut(s)	521, 1161, 1163, 1428, 1553
HinP1I	GCGC	5 cut(s)	521, 1161, 1163, 1428, 1553
HindIII	AAGCTT	3 cut(s)	914, 1122, 1139
HinfI	GANTC	5 cut(s)	114, 1043, 1088, 1369, 1492
HphI	GGTGA	3 cut(s)	331, 486, 574
Hpy166II	GTNNAC	1 cut(s)	1229
Hpy188I	TCNGA	7 cut(s)	113, 444, 739, 1129, 1374, 1443, 1462
Hpy188III	TCNNGA	4 cut(s)	375, 611, 784, 1601
Hpy8I	GTNNAC	1 cut(s)	1229
HpyAV	CCTTC	7 cut(s)	423, 541, 677, 928, 949, 1031, 1685
HpyCH4III	ACNGT	6 cut(s)	512, 548, 562, 695, 871, 901
HpyCH4IV	ACGT	1 cut(s)	1424
HpyCH4V	TGCA	9 cut(s)	803, 970, 986, 992, 1031, 1246, 1266, 1406, 1501
HpyF10VI	GCNNNNNNNGC	5 cut(s)	18, 922, 989, 1287, 1571
HpyF3I	CTNAG	6 cut(s)	681, 879, 917, 1008, 1128, 1200
HpySE526I	ACGT	1 cut(s)	1424
Hsp92II	CATG	7 cut(s)	317, 559, 614, 680, 787, 1157, 1294
HspAI	GCGC	5 cut(s)	521, 1161, 1163, 1428, 1553
KroI	GCCGGC	2 cut(s)	925, 1286
KroNI	GCCGGC	2 cut(s)	927, 1288
Ksp22I	TGATCA	2 cut(s)	274, 613
Kzo9I	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
LmnI	GCTCC	4 cut(s)	229, 251, 642, 1579
Lsp1109I	GCAGC	3 cut(s)	607, 970, 1348
LweI	GCATC	3 cut(s)	1253, 1404, 1520
MaeI	CTAG	2 cut(s)	435, 1358
MaeII	ACGT	1 cut(s)	1424
MaeIII	GTNAC	2 cut(s)	425, 707
MalI	GATC	5 cut(s)	276, 615, 1052, 1586, 1654
MauBI	CGCGCGCG	1 cut(s)	1161
MboI	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
MboII	GAAGA	6 cut(s)	123, 824, 1024, 1083, 1475, 1662
MfeI	CAATTG	2 cut(s)	402, 1505
MhlI	GDGCHC	1 cut(s)	1576
MlyI	GAGTC	1 cut(s)	1037
MmeI	TCCRAC	4 cut(s)	242, 789, 1351, 1503
MroNI	GCCGGC	2 cut(s)	925, 1286
MroXI	GAANNNNTTC	1 cut(s)	1596
MseI	TTAA	3 cut(s)	75, 1535, 1703
MslI	CAYNNNNRTG	1 cut(s)	560
MspA1I	CMGCKG	2 cut(s)	878, 1489
MspR9I	CCNGG	6 cut(s)	525, 713, 847, 931, 1260, 1578
MunI	CAATTG	2 cut(s)	402, 1505
MvaI	CCWGG	3 cut(s)	847, 1260, 1578
MvnI	CGCG	5 cut(s)	521, 1161, 1163, 1165, 1430
MwoI	GCNNNNNNNGC	5 cut(s)	18, 922, 989, 1287, 1571
NaeI	GCCGGC	2 cut(s)	927, 1288
NciI	CCSGG	3 cut(s)	525, 713, 931
NdeII	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
NgoMIV	GCCGGC	2 cut(s)	925, 1286
NlaIII	CATG	7 cut(s)	317, 559, 614, 680, 787, 1157, 1294
NlaIV	GGNNCC	5 cut(s)	449, 529, 581, 1257, 1684
NmuCI	GTSAC	1 cut(s)	425
NspI	RCATGY	1 cut(s)	1294
PaeI	GCATGC	1 cut(s)	1294
PagI	TCATGA	2 cut(s)	610, 783
PauI	GCGCGC	1 cut(s)	1161
PdiI	GCCGGC	2 cut(s)	927, 1288
PdmI	GAANNNNTTC	1 cut(s)	1596
PfeI	GAWTC	4 cut(s)	114, 1088, 1369, 1492
PflMI	CCANNNNNTGG	1 cut(s)	1195
PfoI	TCCNGGA	1 cut(s)	845
PinAI	ACCGGT	1 cut(s)	744
PkrI	GCNGC	6 cut(s)	597, 877, 985, 1167, 1363, 1432
PleI	GAGTC	1 cut(s)	1037
PpsI	GAGTC	1 cut(s)	1037
Ppu21I	YACGTR	1 cut(s)	1425
PpuMI	RGGWCCY	1 cut(s)	528
Psp124BI	GAGCTC	1 cut(s)	1576
Psp5II	RGGWCCY	1 cut(s)	528
Psp6I	CCWGG	3 cut(s)	845, 1258, 1576
PspEI	GGTNACC	1 cut(s)	707
PspGI	CCWGG	3 cut(s)	845, 1258, 1576
PspN4I	GGNNCC	5 cut(s)	449, 529, 581, 1257, 1684
PspPI	GGNCC	2 cut(s)	528, 580
PspPPI	RGGWCCY	1 cut(s)	528
PstI	CTGCAG	2 cut(s)	805, 994
PteI	GCGCGC	1 cut(s)	1161
PvuII	CAGCTG	1 cut(s)	1489
RsaI	GTAC	1 cut(s)	550
RsaNI	GTAC	1 cut(s)	549
RseI	CAYNNNNRTG	1 cut(s)	560
SacI	GAGCTC	1 cut(s)	1576
SaqAI	TTAA	3 cut(s)	75, 1535, 1703
SatI	GCNGC	6 cut(s)	596, 876, 984, 1166, 1362, 1431
Sau3AI	GATC	5 cut(s)	274, 613, 1050, 1584, 1652
Sau96I	GGNCC	2 cut(s)	528, 580
SchI	GAGTC	1 cut(s)	1037
ScrFI	CCNGG	6 cut(s)	525, 713, 847, 931, 1260, 1578
SduI	GDGCHC	1 cut(s)	1576
SfaNI	GCATC	3 cut(s)	1253, 1404, 1520
SfcI	CTRYAG	3 cut(s)	801, 870, 990
SinI	GGWCC	2 cut(s)	528, 580
SmiMI	CAYNNNNRTG	1 cut(s)	560
SphI	GCATGC	1 cut(s)	1294
SsiI	CCGC	5 cut(s)	639, 876, 1159, 1165, 1430
SspMI	CTAG	2 cut(s)	435, 1358
SstI	GAGCTC	1 cut(s)	1576
StyD4I	CCNGG	6 cut(s)	523, 711, 845, 929, 1258, 1576
TaaI	ACNGT	6 cut(s)	512, 548, 562, 695, 871, 901
TaiI	ACGT	1 cut(s)	1427
TaqI	TCGA	3 cut(s)	416, 1392, 1583
TauI	GCSGC	3 cut(s)	878, 1168, 1433
TfiI	GAWTC	4 cut(s)	114, 1088, 1369, 1492
Tru1I	TTAA	3 cut(s)	75, 1535, 1703
Tru9I	TTAA	3 cut(s)	75, 1535, 1703
TscAI	CASTG	6 cut(s)	723, 874, 1012, 1186, 1231, 1549
TseFI	GTSAC	1 cut(s)	425
TseI	GCWGC	3 cut(s)	595, 983, 1361
Tsp45I	GTSAC	1 cut(s)	425
TspRI	CASTG	6 cut(s)	723, 874, 1012, 1186, 1231, 1549
Van91I	CCANNNNNTGG	1 cut(s)	1195
VpaK11BI	GGWCC	2 cut(s)	528, 580
XapI	RAATTY	3 cut(s)	621, 1537, 1637
XceI	RCATGY	1 cut(s)	1294
XmnI	GAANNNNTTC	1 cut(s)	1596
XspI	CTAG	2 cut(s)	435, 1358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.