Prupe.8G095700_v2.0.a1

Transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
12776330 .. 12780454
4125 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G095700.5

Sequence Viewer

Length: 1326 bp
ATGAACAGAGCGTTGCCGGAGATGCTGAACTGTATGAACGCCCCGGGCACCTTCCTCGCCGGGAACTGTACGGACATGACTGTGCTCGAGCGGCAGAGGGCTCGGATGAAGTGGCACCTGCACGAGCATAATGATCCAATTCAGCTGCATCAGCAGCAGCAAGGGTACAATTTTAGCGGGAACGAGCTTAGCGGAGTATTCTCTGTTCCGATTCCGGCGGGTCAGGCTCAGGGCTTCATGGGTTTGGTGTGCGGTGACTCGGCGGTGAAACCCGACCCGTGTTCGGAAAACAGATGGGCTGAATTGGGTTATGGGTCTTGTGGGTTGGTCGTGAACAATAATGGCGCAGCAGGGTTTGAGGAGATGATTAATGGTCGCAATAATAATAGTAATATTTCCAGGACTTTTAGCTGCCCACCTACTGTGGCCGCTGAGAAAAAGTCCAACGACGCCGTTTTGTCTCAGAAGATTAGCTTGCCGACCGGGAAGGAAAGCTTTAAGAAGAGGAAGGCTGATAAGGTACAGAGCAATAAGGCTGTAGCTGCAGAAGATGATAGCACAGAGAAAAGAATGAAAGGGTGCGCAGAGGAGGGAGACTCCAAGATCACAGAGCAAACCAGCACCAAGAACAACACAAACAACGATAGAGAATCTTCTGGTGATACTTCAAAAGACAATTCAAAAGCTTCTGAGGTTCAAAAGCCTGATTACATTCATGTCCGGGCACGGCGAGGTCAGGCCACTGATAGCCACAGCTTGGCTGAGAGGGTGAGGAGGGAAAAAATCAGTGAAAGAATGAAGTATCTGCAAGATTTAGTACCAGGGTGCAACAAGATCACTGGCAAGGCTGGCATGCTCGACGAAATCATCAATTATGTTCAATCTCTTCAACGACAAGTAGAGTTCCTGTCTATGAAACTAGCTGCTGTTAATCCGCGGCTTGACTTCAACATTGACGATTTGTTTGCGAAAGAGATGTTTCCTGCGTGCGCGGCCAATTTTCCGACGATTGGGATGTCATCAGAAATGACCAATTCTGCATATGTGCAGTTTAATCCAGTACAGCAAATGGTTTCATCTTGTGGCTTGGATATGGGGATAAATTCCTCCGATTTGGCACTTCGAAGAACCATCAGTGCTCCTGTATCGATCCCCGAAACATTTCTCGACACATCCTGCTTCACTCAAGCCCCTCCTACTGCAATTTGGGATGCTGATTTACAAAACCTTTTCAATGTGGAATTCCAACAAGGAAGAACAACACCCTTTCAATCGCAACCATTTACAGGGTCTATTGAAGCTAGCAATTTAAAGATGGAGATGTGA

Protein Analysis

442

Amino Acids

48.59

Weight (kDa)

5.82

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 126
Acc16I TGCGCA 1 cut(s) 583
Acc36I ACCTGC 1 cut(s) 126
AccB1I GGYRCC 2 cut(s) 47, 114
AccB7I CCANNNNNTGG 1 cut(s) 757
AccBSI CCGCTC 1 cut(s) 91
AccII CGCG 2 cut(s) 937, 992
AclWI GGATC 2 cut(s) 128, 1144
AcoI YGGCCR 2 cut(s) 426, 993
AcsI RAATTY 2 cut(s) 1102, 1241
AcyI GRCGYC 1 cut(s) 450
AfaI GTAC 5 cut(s) 70, 167, 522, 819, 1062
AfiI CCNNNNNNNGG 4 cut(s) 283, 757, 1010, 1286
AgsI TTSAA 9 cut(s) 669, 681, 698, 881, 890, 949, 1234, 1271, 1298
AjnI CCWGG 2 cut(s) 398, 820
Alw21I GWGCWC 2 cut(s) 87, 1141
Alw26I GTCTC 2 cut(s) 465, 588
AlwI GGATC 2 cut(s) 128, 1144
Ama87I CYCGRG 2 cut(s) 43, 86
AoxI GGCC 3 cut(s) 426, 738, 993
ApeKI GCWGC 7 cut(s) 145, 154, 157, 347, 411, 542, 923
ApoI RAATTY 2 cut(s) 1102, 1241
ArsI GACNNNNNNTTYG 2 cut(s) 947, 979
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 1 cut(s) 1161
AspLEI GCGC 3 cut(s) 347, 584, 992
AsuC2I CCSGG 5 cut(s) 44, 45, 61, 484, 722
AsuHPI GGTGA 4 cut(s) 266, 277, 671, 781
AsuII TTCGAA 1 cut(s) 1123
AsuNHI GCTAGC 1 cut(s) 1301
AvaI CYCGRG 2 cut(s) 43, 86
BaeGI GKGCMC 2 cut(s) 50, 727
BanI GGYRCC 2 cut(s) 47, 114
BanII GRGCYC 1 cut(s) 103
BauI CACGAG 1 cut(s) 122
Bbv12I GWGCWC 2 cut(s) 87, 1141
BbvI GCAGC 7 cut(s) 132, 166, 169, 359, 398, 529, 910
BccI CCATC 3 cut(s) 288, 1139, 1309
BceAI ACGGC 2 cut(s) 437, 743
BcgI CGANNNNNNTGC 6 cut(s) 37, 71, 83, 117, 947, 981
BciT130I CCWGG 2 cut(s) 400, 822
BcnI CCSGG 5 cut(s) 44, 45, 61, 484, 722
BcoDI GTCTC 2 cut(s) 465, 588
BfaI CTAG 2 cut(s) 920, 1302
BfmI CTRYAG 2 cut(s) 537, 543
BfuAI ACCTGC 1 cut(s) 126
BlpI GCTNAGC 1 cut(s) 188
Bme1390I CCNGG 7 cut(s) 44, 45, 61, 400, 484, 722, 822
BmeT110I CYCGRG 2 cut(s) 43, 86
BmiI GGNNCC 2 cut(s) 49, 116
BmrFI CCNGG 7 cut(s) 44, 45, 61, 400, 484, 722, 822
BmsI GCATC 3 cut(s) 12, 157, 1201
BmtI GCTAGC 1 cut(s) 1305
BplI GAGNNNNNCTC 2 cut(s) 581, 613
Bpu10I CCTNAGC 1 cut(s) 228
Bpu1102I GCTNAGC 1 cut(s) 188
Bpu14I TTCGAA 1 cut(s) 1123
BpuEI CTTGAG 1 cut(s) 1170
BpuMI CCSGG 5 cut(s) 44, 45, 61, 484, 722
Bsa29I ATCGAT 1 cut(s) 1148
BsaHI GRCGYC 1 cut(s) 450
BsaJI CCNNGG 4 cut(s) 42, 43, 821, 935
Bsc4I CCNNNNNNNGG 4 cut(s) 283, 757, 1010, 1286
Bse1I ACTGG 2 cut(s) 844, 1058
BseBI CCWGG 2 cut(s) 400, 822
BseCI ATCGAT 1 cut(s) 1148
BseDI CCNNGG 4 cut(s) 42, 43, 821, 935
BseGI GGATG 4 cut(s) 111, 1020, 1172, 1216
BseLI CCNNNNNNNGG 4 cut(s) 283, 757, 1010, 1286
BseMII CTCAG 5 cut(s) 242, 423, 476, 681, 753
BseNI ACTGG 2 cut(s) 844, 1058
BseRI GAGGAG 3 cut(s) 374, 602, 787
BseSI GKGCMC 2 cut(s) 50, 727
BseXI GCAGC 7 cut(s) 132, 166, 169, 359, 398, 529, 910
BsgI GTGCAG 2 cut(s) 104, 1067
Bsh1236I CGCG 2 cut(s) 937, 992
Bsh1285I CGRYCG 1 cut(s) 483
BshFI GGCC 3 cut(s) 428, 740, 995
BshNI GGYRCC 2 cut(s) 47, 114
BshVI ATCGAT 1 cut(s) 1148
BsiEI CGRYCG 1 cut(s) 483
BsiHKAI GWGCWC 2 cut(s) 87, 1141
BsiHKCI CYCGRG 2 cut(s) 43, 86
BsiSI CCGG 6 cut(s) 17, 44, 60, 215, 483, 721
BslI CCNNNNNNNGG 4 cut(s) 283, 757, 1010, 1286
BsmAI GTCTC 2 cut(s) 465, 588
BsnI GGCC 3 cut(s) 428, 740, 995
BsoBI CYCGRG 2 cut(s) 43, 86
Bsp119I TTCGAA 1 cut(s) 1123
Bsp1286I GDGCHC 5 cut(s) 50, 87, 103, 727, 1141
Bsp143I GATC 4 cut(s) 133, 603, 834, 1149
Bsp1720I GCTNAGC 1 cut(s) 188
BspANI GGCC 3 cut(s) 428, 740, 995
BspCNI CTCAG 5 cut(s) 241, 424, 475, 682, 754
BspDI ATCGAT 1 cut(s) 1148
BspFNI CGCG 2 cut(s) 937, 992
BspLI GGNNCC 2 cut(s) 49, 116
BspMAI CTGCAG 1 cut(s) 547
BspMI ACCTGC 1 cut(s) 126
BspOI GCTAGC 1 cut(s) 1305
BspPI GGATC 2 cut(s) 128, 1144
BspT104I TTCGAA 1 cut(s) 1123
BspT107I GGYRCC 2 cut(s) 47, 114
BsrBI CCGCTC 1 cut(s) 91
BsrI ACTGG 2 cut(s) 844, 1058
BssECI CCNNGG 4 cut(s) 42, 43, 821, 935
BssMI GATC 4 cut(s) 133, 603, 834, 1149
BssNI GRCGYC 1 cut(s) 450
BssSI CACGAG 1 cut(s) 122
Bst2BI CACGAG 1 cut(s) 122
Bst2UI CCWGG 2 cut(s) 400, 822
Bst4CI ACNGT 4 cut(s) 32, 68, 82, 424
Bst6I CTCTTC 2 cut(s) 497, 891
BstACI GRCGYC 1 cut(s) 450
BstBI TTCGAA 1 cut(s) 1123
BstC8I GCNNGC 5 cut(s) 476, 850, 854, 988, 1303
BstDEI CTNAG 6 cut(s) 188, 228, 432, 462, 690, 762
BstDSI CCRYGG 1 cut(s) 935
BstF5I GGATG 4 cut(s) 111, 1020, 1172, 1216
BstFNI CGCG 2 cut(s) 937, 992
BstHHI GCGC 3 cut(s) 347, 584, 992
BstKTI GATC 4 cut(s) 136, 606, 837, 1152
BstMAI GTCTC 2 cut(s) 465, 588
BstMBI GATC 4 cut(s) 133, 603, 834, 1149
BstMCI CGRYCG 1 cut(s) 483
BstMWI GCNNNNNNNGC 8 cut(s) 22, 91, 151, 154, 224, 542, 849, 992
BstNI CCWGG 2 cut(s) 400, 822
BstNSI RCATGY 1 cut(s) 856
BstSCI CCNGG 7 cut(s) 42, 43, 59, 398, 482, 720, 820
BstSFI CTRYAG 2 cut(s) 537, 543
BstSLI GKGCMC 2 cut(s) 50, 727
BstUI CGCG 2 cut(s) 937, 992
BstV1I GCAGC 7 cut(s) 132, 166, 169, 359, 398, 529, 910
Bsu15I ATCGAT 1 cut(s) 1148
BsuRI GGCC 3 cut(s) 428, 740, 995
BsuTUI ATCGAT 1 cut(s) 1148
BtgI CCRYGG 1 cut(s) 935
BtsCI GGATG 4 cut(s) 111, 1020, 1172, 1216
BtsIMutI CAGTG 4 cut(s) 741, 793, 837, 1141
BveI ACCTGC 1 cut(s) 126
Cac8I GCNNGC 5 cut(s) 476, 850, 854, 988, 1303
CfoI GCGC 3 cut(s) 347, 584, 992
Cfr42I CCGCGG 1 cut(s) 938
Cfr9I CCCGGG 1 cut(s) 43
ClaI ATCGAT 1 cut(s) 1148
CseI GACGC 1 cut(s) 458
Csp6I GTAC 5 cut(s) 69, 166, 521, 818, 1061
CviAII CATG 4 cut(s) 76, 238, 716, 853
CviQI GTAC 5 cut(s) 69, 166, 521, 818, 1061
DdeI CTNAG 6 cut(s) 188, 228, 432, 462, 690, 762
DpnI GATC 4 cut(s) 135, 605, 836, 1151
DpnII GATC 4 cut(s) 133, 603, 834, 1149
DraI TTTAAA 1 cut(s) 1311
EaeI YGGCCR 2 cut(s) 426, 993
Eam1104I CTCTTC 2 cut(s) 497, 891
EarI CTCTTC 2 cut(s) 497, 891
Eco24I GRGCYC 1 cut(s) 103
Eco88I CYCGRG 2 cut(s) 43, 86
EcoRI GAATTC 1 cut(s) 1241
EcoRII CCWGG 2 cut(s) 398, 820
EcoT38I GRGCYC 1 cut(s) 103
FaeI CATG 4 cut(s) 79, 241, 719, 856
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 479, 511
FatI CATG 4 cut(s) 75, 237, 715, 852
FauI CCCGC 2 cut(s) 170, 211
FauNDI CATATG 1 cut(s) 1042
FokI GGATG 4 cut(s) 118, 1027, 1159, 1223
FriOI GRGCYC 1 cut(s) 103
FspBI CTAG 2 cut(s) 920, 1302
FspI TGCGCA 1 cut(s) 583
GlaI GCGC 3 cut(s) 346, 583, 991
HaeIII GGCC 3 cut(s) 428, 740, 995
HapII CCGG 6 cut(s) 17, 44, 60, 215, 483, 721
HgaI GACGC 1 cut(s) 458
HhaI GCGC 3 cut(s) 347, 584, 992
Hin1I GRCGYC 1 cut(s) 450
Hin1II CATG 4 cut(s) 79, 241, 719, 856
Hin6I GCGC 3 cut(s) 345, 582, 990
HinP1I GCGC 3 cut(s) 345, 582, 990
HindIII AAGCTT 2 cut(s) 493, 684
HinfI GANTC 4 cut(s) 211, 257, 596, 650
HpaII CCGG 6 cut(s) 17, 44, 60, 215, 483, 721
HphI GGTGA 4 cut(s) 266, 277, 671, 781
Hpy166II GTNNAC 1 cut(s) 334
Hpy188I TCNGA 8 cut(s) 105, 210, 286, 465, 691, 1005, 1024, 1111
Hpy188III TCNNGA 2 cut(s) 331, 1166
Hpy8I GTNNAC 1 cut(s) 334
Hpy99I CGWCG 3 cut(s) 452, 863, 1009
HpyAV CCTTC 3 cut(s) 61, 481, 502
HpyCH4III ACNGT 4 cut(s) 32, 68, 82, 424
HpyCH4V TGCA 8 cut(s) 121, 148, 545, 808, 828, 1040, 1048, 1202
HpyF10VI GCNNNNNNNGC 8 cut(s) 22, 91, 151, 154, 224, 542, 849, 992
HpyF3I CTNAG 6 cut(s) 188, 228, 432, 462, 690, 762
Hsp92I GRCGYC 1 cut(s) 450
Hsp92II CATG 4 cut(s) 79, 241, 719, 856
HspAI GCGC 3 cut(s) 345, 582, 990
KspI CCGCGG 1 cut(s) 938
Kzo9I GATC 4 cut(s) 133, 603, 834, 1149
LmnI GCTCC 1 cut(s) 1144
Lsp1109I GCAGC 7 cut(s) 132, 166, 169, 359, 398, 529, 910
LweI GCATC 3 cut(s) 12, 157, 1201
MaeI CTAG 2 cut(s) 920, 1302
MaeIII GTNAC 1 cut(s) 254
MalI GATC 4 cut(s) 135, 605, 836, 1151
MbiI CCGCTC 1 cut(s) 91
MboI GATC 4 cut(s) 133, 603, 834, 1149
MboII GAAGA 7 cut(s) 478, 514, 560, 645, 878, 1137, 1266
MhlI GDGCHC 5 cut(s) 50, 87, 103, 727, 1141
MlyI GAGTC 2 cut(s) 251, 590
MmeI TCCRAC 3 cut(s) 468, 1028, 1270
MroXI GAANNNNTTC 1 cut(s) 1161
MseI TTAA 5 cut(s) 369, 498, 930, 1053, 1310
MslI CAYNNNNRTG 1 cut(s) 80
MspA1I CMGCKG 3 cut(s) 145, 431, 937
MspI CCGG 6 cut(s) 17, 44, 60, 215, 483, 721
MspR9I CCNGG 7 cut(s) 44, 45, 61, 400, 484, 722, 822
MvaI CCWGG 2 cut(s) 400, 822
MvnI CGCG 2 cut(s) 937, 992
MwoI GCNNNNNNNGC 8 cut(s) 22, 91, 151, 154, 224, 542, 849, 992
NciI CCSGG 5 cut(s) 44, 45, 61, 484, 722
NdeI CATATG 1 cut(s) 1042
NdeII GATC 4 cut(s) 133, 603, 834, 1149
NheI GCTAGC 1 cut(s) 1301
NlaIII CATG 4 cut(s) 79, 241, 719, 856
NlaIV GGNNCC 2 cut(s) 49, 116
NmeAIII GCCGAG 1 cut(s) 239
NmuCI GTSAC 1 cut(s) 254
NsbI TGCGCA 1 cut(s) 583
NspI RCATGY 1 cut(s) 856
NspV TTCGAA 1 cut(s) 1123
PaeI GCATGC 1 cut(s) 856
PaeR7I CTCGAG 1 cut(s) 86
PaqCI CACCTGC 1 cut(s) 126
PdmI GAANNNNTTC 1 cut(s) 1161
PfeI GAWTC 2 cut(s) 211, 650
PflMI CCANNNNNTGG 1 cut(s) 757
PfoI TCCNGGA 1 cut(s) 398
PleI GAGTC 2 cut(s) 251, 590
PpsI GAGTC 2 cut(s) 251, 590
PshBI ATTAAT 1 cut(s) 369
Psp6I CCWGG 2 cut(s) 398, 820
PspGI CCWGG 2 cut(s) 398, 820
PspN4I GGNNCC 2 cut(s) 49, 116
PspXI VCTCGAGB 1 cut(s) 86
PsrI GAACNNNNNNTAC 2 cut(s) 189, 221
PstI CTGCAG 1 cut(s) 547
PvuII CAGCTG 1 cut(s) 145
RsaI GTAC 5 cut(s) 70, 167, 522, 819, 1062
RsaNI GTAC 5 cut(s) 69, 166, 521, 818, 1061
RseI CAYNNNNRTG 1 cut(s) 80
SacII CCGCGG 1 cut(s) 938
SaqAI TTAA 5 cut(s) 369, 498, 930, 1053, 1310
Sau3AI GATC 4 cut(s) 133, 603, 834, 1149
SchI GAGTC 2 cut(s) 251, 590
ScrFI CCNGG 7 cut(s) 44, 45, 61, 400, 484, 722, 822
SduI GDGCHC 5 cut(s) 50, 87, 103, 727, 1141
SfaNI GCATC 3 cut(s) 12, 157, 1201
SfcI CTRYAG 2 cut(s) 537, 543
Sfr274I CTCGAG 1 cut(s) 86
Sfr303I CCGCGG 1 cut(s) 938
SfuI TTCGAA 1 cut(s) 1123
SgrBI CCGCGG 1 cut(s) 938
SlaI CTCGAG 1 cut(s) 86
SmaI CCCGGG 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 80
SmlI CTYRAG 2 cut(s) 86, 1185
SmoI CTYRAG 2 cut(s) 86, 1185
SphI GCATGC 1 cut(s) 856
SspI AATATT 1 cut(s) 394
SspMI CTAG 2 cut(s) 920, 1302
StyD4I CCNGG 7 cut(s) 42, 43, 59, 398, 482, 720, 820
TaaI ACNGT 4 cut(s) 32, 68, 82, 424
TaqI TCGA 5 cut(s) 87, 858, 1123, 1148, 1167
TatI WGTACW 1 cut(s) 1060
TauI GCSGC 4 cut(s) 94, 431, 940, 995
TfiI GAWTC 2 cut(s) 211, 650
Tru1I TTAA 5 cut(s) 369, 498, 930, 1053, 1310
Tru9I TTAA 5 cut(s) 369, 498, 930, 1053, 1310
TscAI CASTG 4 cut(s) 748, 793, 844, 1141
TseFI GTSAC 1 cut(s) 254
TseI GCWGC 7 cut(s) 145, 154, 157, 347, 411, 542, 923
Tsp45I GTSAC 1 cut(s) 254
TspDTI ATGAA 9 cut(s) 17, 50, 122, 226, 587, 704, 812, 929, 1065
TspGWI ACGGA 1 cut(s) 86
TspMI CCCGGG 1 cut(s) 43
TspRI CASTG 4 cut(s) 748, 793, 844, 1141
Van91I CCANNNNNTGG 1 cut(s) 757
VspI ATTAAT 1 cut(s) 369
XapI RAATTY 2 cut(s) 1102, 1241
XceI RCATGY 1 cut(s) 856
XhoI CTCGAG 1 cut(s) 86
XmaI CCCGGG 1 cut(s) 43
XmnI GAANNNNTTC 1 cut(s) 1161
XspI CTAG 2 cut(s) 920, 1302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.