MD05G1108400.v1.1

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0016745
Physical Location & Seq
Forward (+)
22260265 .. 22262387
2123 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1108400.v1.1.491

Sequence Viewer

Length: 1458 bp
ATGTCTCTATCTTCTTCTTCCAGTCTTCACGCTCCTCTCTCCCCCTCTCTCTCCCCTTATATTCCTAATCCCACCCAAAACCCAACAATCACAACGATCAAACCTCCCAGATCAAACCCTGACCAAACCTCCCAAACCCTTTCAATGGATCCGTGCCCGTTTGTACGGATCCTCGTCGGGGACTTGACCCTCAAGTTTCCCATGGCCTCCAGGCCCTCCTCCGCCACCGTCCACCCCTCCTCCTCCCCCTGCTTCTGCAAGATCAAACTCTCCAACTTCCCCCACCAGGTCTCCACGGTCCCGCTCATCGCCAACGACGGCCAAGCCGCGCAGACGGCCACCCACAACCACTCCCTCGCCGCTTGCTTCAATTTGAACAAAACCCAAATCGAGACTTTATCCTCCAAGCGATCCATCTTGAAAATCGCGGTCTACACGGGTCGGGTCGGCGCCACTTGTGGGTTAAACAGCGCGAAGTTGTTGGGTCGGGTTAATGTGCCGTTGTCAGAGCTGGGTGTGGCGGAGTCCAGGCCCGTTGTGTATCAGAACGGGTGGATCGCCATTGGTGGGAAGAAGAAGAGTAACGGCAATGGCTCCTCGTCGGCGGAGTTGTATTTGAGCGTCCGAGCCGAACCCGACCCGAGATTCATTTTTCAGTTCGACGGAGAGCCCGAGTGTAGCCCTCAAGTATTTCAAGTACAAGGGAATGTGAAGCAGCCGGTCTTCACTTGCAAGTTCGGCTTCAGAAACGATTTGCAATCGAGGTCAATGTCATCACAGCCAGGCACACCGCGAAATTGGCTGCCTTTCGGTGGGACCCACAAGGAGCAAATCGCGAAGGAGCGAAAAGGGTGGTCGATCACGATCCACGACCTATCCGGCTCGCCCGTGGCGGCGGCGTCGATGGTGACCCCGTTCGTAGCCTCGCCAGGTTCACACCGCGTGAGCCGGTCCAACCCGGGAGCGTGGCTCATCCTCCGCCCGAACGAGGGAACATGGCAGCCTTGGGGCCGGCTAGAGGCTTGGCTCGAGCGCGGCGGCTCCGACAACGTTGGGTACCGTTTCGAGCTCCAGAACTCGACTCTCGCGAACTCCACCCTCGGCGCAAAAAATGGCGGGAAGTTCTCGATCGACCTGACCTCGAGCCTGACTCCGGCGAACAGCCCCCACAGTAGCTTCGACTTAGGGTCGGGGTCGTCGTCCAGACCGGGATCCGGATCCGGATCAGACTTCGGGTTCGGGCTGCTTCCCAGCCTGGTACAGAGAGGGTTTGTGATGTCCTCTACGGTGGAGGGTGTCGGGAAGTGTAGCAAGCCGGAGGTGGAGGTCGGGGTACAGCACGTGACCTGCACGGAAGATGCGGCCGCTTATGTGGCATTGGCGGCGGCAATGGATCTGAGCATGGATGCTTGCCGGCCGTTTTCTCAGAAACTCCGGAAGGAGCTGAGGCAGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

486

Amino Acids

51.88

Weight (kDa)

9.34

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 49 - 483 7e-189 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016745)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03010
malus_domestica MD05G1108400.v1.1
prunus_persica Prupe.8G152100_v2.0.a1
pyrus_communis pycom05g10440
rosa_chinensis RchiOBHm_Chr6g0247801
rosa_laevigata RLG00000015178
rosa_roxburghii Rroxscaffold_180G00433230 Rroxscaffold_7G00213640
rosa_rugosa Rorug05G0529000
rosa_samantha Rh6AG043800 Rh6BG038600 Rh6CG037300 Rh6DG034400
rosa_wichuraiana Rw6G003800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1355
Acc65I GGTACC 1 cut(s) 1056
AccB1I GGYRCC 2 cut(s) 449, 1056
AccBSI CCGCTC 1 cut(s) 304
AccI GTMKAC 1 cut(s) 432
AccII CGCG 8 cut(s) 329, 428, 473, 793, 836, 942, 1035, 1088
AccIII TCCGGA 3 cut(s) 1214, 1220, 1434
AclI AACGTT 1 cut(s) 1050
AcoI YGGCCR 4 cut(s) 319, 336, 1362, 1415
AcuI CTGAAG 1 cut(s) 727
AcvI CACGTG 1 cut(s) 1342
AcyI GRCGYC 2 cut(s) 450, 899
AdeI CACNNNGTG 1 cut(s) 943
AfaI GTAC 5 cut(s) 165, 699, 1058, 1260, 1335
AgsI TTSAA 5 cut(s) 144, 370, 376, 421, 695
AhdI GACNNNNNGTC 1 cut(s) 1186
AjnI CCWGG 6 cut(s) 209, 285, 527, 781, 928, 1254
AluBI AGCT 4 cut(s) 511, 1069, 1176, 1444
AluI AGCT 4 cut(s) 511, 1069, 1176, 1444
Alw21I GWGCWC 1 cut(s) 1071
Alw26I GTCTC 3 cut(s) 9, 295, 386
Ama87I CYCGRG 5 cut(s) 640, 671, 958, 1028, 1141
Aor13HI TCCGGA 3 cut(s) 1214, 1220, 1434
AoxI GGCC 8 cut(s) 204, 212, 319, 336, 530, 1009, 1362, 1415
ApeKI GCWGC 5 cut(s) 715, 802, 1000, 1243, 1450
ArsI GACNNNNNNTTYG 2 cut(s) 1220, 1252
Asp718I GGTACC 1 cut(s) 1056
AspLEI GCGC 5 cut(s) 331, 452, 473, 1035, 1106
AspS9I GGNCC 6 cut(s) 213, 298, 531, 816, 951, 1009
AsuC2I CCSGG 3 cut(s) 959, 960, 1209
AsuHPI GGTGA 1 cut(s) 919
AvaI CYCGRG 5 cut(s) 640, 671, 958, 1028, 1141
AvaII GGWCC 3 cut(s) 298, 816, 951
BaeGI GKGCMC 1 cut(s) 158
BamHI GGATCC 4 cut(s) 148, 168, 1211, 1217
BanI GGYRCC 2 cut(s) 449, 1056
BanII GRGCYC 2 cut(s) 672, 1071
BbrPI CACGTG 1 cut(s) 1342
BbsI GAAGAC 2 cut(s) 17, 715
Bbv12I GWGCWC 1 cut(s) 1071
BbvCI CCTCAGC 1 cut(s) 1445
BbvI GCAGC 4 cut(s) 727, 789, 1012, 1230
BccI CCATC 2 cut(s) 422, 898
BceAI ACGGC 5 cut(s) 334, 351, 484, 601, 1402
BciT130I CCWGG 6 cut(s) 211, 287, 529, 783, 930, 1256
BcnI CCSGG 3 cut(s) 959, 960, 1209
BcoDI GTCTC 3 cut(s) 9, 295, 386
BfaI CTAG 1 cut(s) 1016
BfoI RGCGCY 1 cut(s) 453
BfuAI ACCTGC 1 cut(s) 1355
Bme1390I CCNGG 9 cut(s) 211, 287, 529, 783, 930, 959, 960, 1209, 1256
Bme18I GGWCC 3 cut(s) 298, 816, 951
BmeRI GACNNNNNGTC 1 cut(s) 1186
BmeT110I CYCGRG 5 cut(s) 640, 671, 958, 1028, 1141
BmgT120I GGNCC 6 cut(s) 213, 298, 531, 816, 951, 1009
BmrFI CCNGG 9 cut(s) 211, 287, 529, 783, 930, 959, 960, 1209, 1256
BmsI GCATC 2 cut(s) 1348, 1396
BpiI GAAGAC 2 cut(s) 17, 715
BplI GAGNNNNNCTC 4 cut(s) 954, 986, 1135, 1167
BpmI CTGGAG 2 cut(s) 193, 1055
Bpu10I CCTNAGC 1 cut(s) 1445
BpuEI CTTGAG 2 cut(s) 176, 669
BpuMI CCSGG 3 cut(s) 959, 960, 1209
BsaAI YACGTR 1 cut(s) 1342
BsaBI GATNNNNATC 3 cut(s) 863, 1216, 1222
BsaHI GRCGYC 2 cut(s) 450, 899
BsaI GGTCTC 1 cut(s) 295
BsaJI CCNNGG 6 cut(s) 201, 294, 888, 958, 1004, 1099
BsaWI WCCGGW 3 cut(s) 1214, 1220, 1434
BsaXI ACNNNNNCTCC 8 cut(s) 113, 143, 224, 254, 275, 305, 335, 365
Bse118I RCCGGY 4 cut(s) 718, 948, 1011, 1413
Bse1I ACTGG 1 cut(s) 21
Bse3DI GCAATG 2 cut(s) 595, 1395
Bse8I GATNNNNATC 3 cut(s) 863, 1216, 1222
BseAI TCCGGA 3 cut(s) 1214, 1220, 1434
BseBI CCWGG 6 cut(s) 211, 287, 529, 783, 930, 1256
BseDI CCNNGG 6 cut(s) 201, 294, 888, 958, 1004, 1099
BseGI GGATG 2 cut(s) 972, 1411
BseJI GATNNNNATC 3 cut(s) 863, 1216, 1222
BseMI GCAATG 2 cut(s) 595, 1395
BseMII CTCAG 3 cut(s) 1388, 1436, 1439
BseNI ACTGG 1 cut(s) 21
BseRI GAGGAG 5 cut(s) 24, 208, 229, 232, 586
BseSI GKGCMC 1 cut(s) 158
BseX3I CGGCCG 2 cut(s) 1362, 1415
BseXI GCAGC 4 cut(s) 727, 789, 1012, 1230
BseYI CCCAGC 2 cut(s) 511, 1250
BsgI GTGCAG 1 cut(s) 1333
Bsh1236I CGCG 8 cut(s) 329, 428, 473, 793, 836, 942, 1035, 1088
Bsh1285I CGRYCG 3 cut(s) 1131, 1365, 1418
BshFI GGCC 8 cut(s) 206, 214, 321, 338, 532, 1011, 1364, 1417
BshNI GGYRCC 2 cut(s) 449, 1056
BsiEI CGRYCG 3 cut(s) 1131, 1365, 1418
BsiHKAI GWGCWC 1 cut(s) 1071
BsiHKCI CYCGRG 5 cut(s) 640, 671, 958, 1028, 1141
BslFI GGGAC 3 cut(s) 194, 284, 829
BsmAI GTCTC 3 cut(s) 9, 295, 386
BsmFI GGGAC 3 cut(s) 194, 284, 829
BsnI GGCC 8 cut(s) 206, 214, 321, 338, 532, 1011, 1364, 1417
Bso31I GGTCTC 1 cut(s) 295
BsoBI CYCGRG 5 cut(s) 640, 671, 958, 1028, 1141
Bsp1286I GDGCHC 3 cut(s) 158, 672, 1071
Bsp13I TCCGGA 3 cut(s) 1214, 1220, 1434
Bsp19I CCATGG 1 cut(s) 201
Bsp68I TCGCGA 2 cut(s) 836, 1088
BspANI GGCC 8 cut(s) 206, 214, 321, 338, 532, 1011, 1364, 1417
BspCNI CTCAG 3 cut(s) 1389, 1437, 1438
BspEI TCCGGA 3 cut(s) 1214, 1220, 1434
BspFNI CGCG 8 cut(s) 329, 428, 473, 793, 836, 942, 1035, 1088
BspMI ACCTGC 1 cut(s) 1355
BspT107I GGYRCC 2 cut(s) 449, 1056
BspTNI GGTCTC 1 cut(s) 295
BsrBI CCGCTC 1 cut(s) 304
BsrDI GCAATG 2 cut(s) 595, 1395
BsrFI RCCGGY 4 cut(s) 718, 948, 1011, 1413
BsrI ACTGG 1 cut(s) 21
BssAI RCCGGY 4 cut(s) 718, 948, 1011, 1413
BssECI CCNNGG 6 cut(s) 201, 294, 888, 958, 1004, 1099
BssNI GRCGYC 2 cut(s) 450, 899
BssT1I CCWWGG 2 cut(s) 201, 1004
Bst2UI CCWGG 6 cut(s) 211, 287, 529, 783, 930, 1256
Bst4CI ACNGT 5 cut(s) 229, 298, 1061, 1172, 1288
Bst6I CTCTTC 1 cut(s) 572
BstACI GRCGYC 2 cut(s) 450, 899
BstBAI YACGTR 1 cut(s) 1342
BstC8I GCNNGC 6 cut(s) 364, 884, 1013, 1313, 1411, 1415
BstDEI CTNAG 4 cut(s) 1183, 1397, 1425, 1445
BstDSI CCRYGG 3 cut(s) 201, 294, 888
BstEII GGTNACC 1 cut(s) 907
BstF5I GGATG 2 cut(s) 972, 1411
BstFNI CGCG 8 cut(s) 329, 428, 473, 793, 836, 942, 1035, 1088
BstH2I RGCGCY 1 cut(s) 453
BstHHI GCGC 5 cut(s) 331, 452, 473, 1035, 1106
BstMAI GTCTC 3 cut(s) 9, 295, 386
BstMCI CGRYCG 3 cut(s) 1131, 1365, 1418
BstMWI GCNNNNNNNGC 6 cut(s) 335, 738, 799, 1373, 1382, 1450
BstNI CCWGG 6 cut(s) 211, 287, 529, 783, 930, 1256
BstPI GGTNACC 1 cut(s) 907
BstSCI CCNGG 9 cut(s) 209, 285, 527, 781, 928, 957, 958, 1207, 1254
BstSLI GKGCMC 1 cut(s) 158
BstUI CGCG 8 cut(s) 329, 428, 473, 793, 836, 942, 1035, 1088
BstV1I GCAGC 4 cut(s) 727, 789, 1012, 1230
BstV2I GAAGAC 2 cut(s) 17, 715
BstX2I RGATCY 5 cut(s) 148, 168, 1211, 1217, 1393
BstYI RGATCY 5 cut(s) 148, 168, 1211, 1217, 1393
BstZI CGGCCG 2 cut(s) 1362, 1415
BsuRI GGCC 8 cut(s) 206, 214, 321, 338, 532, 1011, 1364, 1417
BtgI CCRYGG 3 cut(s) 201, 294, 888
BtgZI GCGATG 1 cut(s) 292
BtsCI GGATG 2 cut(s) 972, 1411
BtuMI TCGCGA 2 cut(s) 836, 1088
BveI ACCTGC 1 cut(s) 1355
Cac8I GCNNGC 6 cut(s) 364, 884, 1013, 1313, 1411, 1415
CciNI GCGGCCGC 1 cut(s) 1362
CfoI GCGC 5 cut(s) 331, 452, 473, 1035, 1106
Cfr10I RCCGGY 4 cut(s) 718, 948, 1011, 1413
Cfr13I GGNCC 6 cut(s) 213, 298, 531, 816, 951, 1009
Cfr9I CCCGGG 1 cut(s) 958
CseI GACGC 2 cut(s) 610, 888
CsiI ACCWGGT 1 cut(s) 285
Csp6I GTAC 5 cut(s) 164, 698, 1057, 1259, 1334
CviAII CATG 3 cut(s) 202, 996, 1402
CviQI GTAC 5 cut(s) 164, 698, 1057, 1259, 1334
DdeI CTNAG 4 cut(s) 1183, 1397, 1425, 1445
DinI GGCGCC 1 cut(s) 451
DraIII CACNNNGTG 1 cut(s) 943
DriI GACNNNNNGTC 1 cut(s) 1186
EaeI YGGCCR 4 cut(s) 319, 336, 1362, 1415
EagI CGGCCG 2 cut(s) 1362, 1415
Eam1104I CTCTTC 1 cut(s) 572
Eam1105I GACNNNNNGTC 1 cut(s) 1186
EarI CTCTTC 1 cut(s) 572
EciI GGCGGA 4 cut(s) 211, 536, 620, 968
Ecl136II GAGCTC 1 cut(s) 1069
EclXI CGGCCG 2 cut(s) 1362, 1415
Eco130I CCWWGG 2 cut(s) 201, 1004
Eco24I GRGCYC 2 cut(s) 672, 1071
Eco31I GGTCTC 1 cut(s) 295
Eco47I GGWCC 3 cut(s) 298, 816, 951
Eco52I CGGCCG 2 cut(s) 1362, 1415
Eco53kI GAGCTC 1 cut(s) 1069
Eco57I CTGAAG 1 cut(s) 727
Eco72I CACGTG 1 cut(s) 1342
Eco88I CYCGRG 5 cut(s) 640, 671, 958, 1028, 1141
Eco91I GGTNACC 1 cut(s) 907
EcoICRI GAGCTC 1 cut(s) 1069
EcoO109I RGGNCCY 2 cut(s) 213, 816
EcoO65I GGTNACC 1 cut(s) 907
EcoRII CCWGG 6 cut(s) 209, 285, 527, 781, 928, 1254
EcoT14I CCWWGG 2 cut(s) 201, 1004
EcoT38I GRGCYC 2 cut(s) 672, 1071
EgeI GGCGCC 1 cut(s) 451
EheI GGCGCC 1 cut(s) 451
ErhI CCWWGG 2 cut(s) 201, 1004
FaeI CATG 3 cut(s) 205, 999, 1405
FaiI YATR 5 cut(s) 60, 203, 997, 1371, 1403
FalI AAGNNNNNCTT 2 cut(s) 725, 757
FaqI GGGAC 3 cut(s) 194, 284, 829
FatI CATG 3 cut(s) 201, 995, 1401
FauI CCCGC 2 cut(s) 309, 1109
FblI GTMKAC 1 cut(s) 432
FokI GGATG 2 cut(s) 959, 1418
FriOI GRGCYC 2 cut(s) 672, 1071
FspBI CTAG 1 cut(s) 1016
GlaI GCGC 5 cut(s) 330, 451, 472, 1034, 1105
GsaI CCCAGC 2 cut(s) 515, 1254
GsuI CTGGAG 2 cut(s) 193, 1055
HaeII RGCGCY 1 cut(s) 453
HaeIII GGCC 8 cut(s) 206, 214, 321, 338, 532, 1011, 1364, 1417
HgaI GACGC 2 cut(s) 610, 888
HhaI GCGC 5 cut(s) 331, 452, 473, 1035, 1106
Hin1I GRCGYC 2 cut(s) 450, 899
Hin1II CATG 3 cut(s) 205, 999, 1405
Hin6I GCGC 5 cut(s) 329, 450, 471, 1033, 1104
HinP1I GCGC 5 cut(s) 329, 450, 471, 1033, 1104
HinfI GANTC 4 cut(s) 524, 645, 1081, 1150
HphI GGTGA 1 cut(s) 919
Hpy166II GTNNAC 3 cut(s) 232, 433, 935
Hpy188I TCNGA 8 cut(s) 508, 546, 626, 746, 1045, 1228, 1398, 1428
Hpy8I GTNNAC 3 cut(s) 232, 433, 935
Hpy99I CGWCG 6 cut(s) 179, 320, 604, 665, 904, 1201
HpyAV CCTTC 2 cut(s) 832, 1432
HpyCH4III ACNGT 5 cut(s) 229, 298, 1061, 1172, 1288
HpyCH4IV ACGT 2 cut(s) 1050, 1341
HpyCH4V TGCA 4 cut(s) 258, 732, 757, 1350
HpyF10VI GCNNNNNNNGC 6 cut(s) 335, 738, 799, 1373, 1382, 1450
HpyF3I CTNAG 4 cut(s) 1183, 1397, 1425, 1445
HpySE526I ACGT 2 cut(s) 1050, 1341
Hsp92I GRCGYC 2 cut(s) 450, 899
Hsp92II CATG 3 cut(s) 205, 999, 1405
HspAI GCGC 5 cut(s) 329, 450, 471, 1033, 1104
KasI GGCGCC 1 cut(s) 449
KflI GGGWCCC 1 cut(s) 816
Kpn2I TCCGGA 3 cut(s) 1214, 1220, 1434
KpnI GGTACC 1 cut(s) 1060
KroI GCCGGC 2 cut(s) 1011, 1413
KroNI GCCGGC 2 cut(s) 1013, 1415
LmnI GCTCC 8 cut(s) 37, 599, 826, 841, 962, 1046, 1074, 1441
Lsp1109I GCAGC 4 cut(s) 727, 789, 1012, 1230
LweI GCATC 2 cut(s) 1348, 1396
MabI ACCWGGT 1 cut(s) 285
MaeI CTAG 1 cut(s) 1016
MaeII ACGT 2 cut(s) 1050, 1341
MaeIII GTNAC 3 cut(s) 581, 907, 1342
MbiI CCGCTC 1 cut(s) 304
MboII GAAGA 9 cut(s) 3, 6, 9, 17, 583, 586, 589, 715, 1367
MflI RGATCY 5 cut(s) 148, 168, 1211, 1217, 1393
MhlI GDGCHC 3 cut(s) 158, 672, 1071
MluCI AATT 2 cut(s) 370, 796
Mly113I GGCGCC 1 cut(s) 450
MlyI GAGTC 3 cut(s) 533, 1075, 1144
MmeI TCCRAC 3 cut(s) 297, 978, 1068
MroI TCCGGA 3 cut(s) 1214, 1220, 1434
MroNI GCCGGC 2 cut(s) 1011, 1413
MseI TTAA 2 cut(s) 464, 492
MspR9I CCNGG 9 cut(s) 211, 287, 529, 783, 930, 959, 960, 1209, 1256
MvaI CCWGG 6 cut(s) 211, 287, 529, 783, 930, 1256
MvnI CGCG 8 cut(s) 329, 428, 473, 793, 836, 942, 1035, 1088
MwoI GCNNNNNNNGC 6 cut(s) 335, 738, 799, 1373, 1382, 1450
NaeI GCCGGC 2 cut(s) 1013, 1415
NarI GGCGCC 1 cut(s) 450
NciI CCSGG 3 cut(s) 959, 960, 1209
NcoI CCATGG 1 cut(s) 201
NgoMIV GCCGGC 2 cut(s) 1011, 1413
NlaIII CATG 3 cut(s) 205, 999, 1405
NmeAIII GCCGAG 1 cut(s) 1080
NmuCI GTSAC 2 cut(s) 907, 1342
NotI GCGGCCGC 1 cut(s) 1362
NruI TCGCGA 2 cut(s) 836, 1088
PaeR7I CTCGAG 2 cut(s) 1028, 1141
PcsI WCGNNNNNNNCGW 3 cut(s) 669, 1085, 1196
PdiI GCCGGC 2 cut(s) 1013, 1415
PfeI GAWTC 1 cut(s) 645
Ple19I CGATCG 1 cut(s) 1131
PleI GAGTC 3 cut(s) 532, 1075, 1144
PluTI GGCGCC 1 cut(s) 453
PmaCI CACGTG 1 cut(s) 1342
PmlI CACGTG 1 cut(s) 1342
PpsI GAGTC 3 cut(s) 532, 1075, 1144
Ppu21I YACGTR 1 cut(s) 1342
PpuMI RGGWCCY 1 cut(s) 816
Psp124BI GAGCTC 1 cut(s) 1071
Psp1406I AACGTT 1 cut(s) 1050
Psp5II RGGWCCY 1 cut(s) 816
Psp6I CCWGG 6 cut(s) 209, 285, 527, 781, 928, 1254
PspCI CACGTG 1 cut(s) 1342
PspEI GGTNACC 1 cut(s) 907
PspFI CCCAGC 2 cut(s) 511, 1250
PspGI CCWGG 6 cut(s) 209, 285, 527, 781, 928, 1254
PspPI GGNCC 6 cut(s) 213, 298, 531, 816, 951, 1009
PspPPI RGGWCCY 1 cut(s) 816
PspXI VCTCGAGB 2 cut(s) 1028, 1141
PsuI RGATCY 5 cut(s) 148, 168, 1211, 1217, 1393
PvuI CGATCG 1 cut(s) 1131
RruI TCGCGA 2 cut(s) 836, 1088
RsaI GTAC 5 cut(s) 165, 699, 1058, 1260, 1335
RsaNI GTAC 5 cut(s) 164, 698, 1057, 1259, 1334
SacI GAGCTC 1 cut(s) 1071
SaqAI TTAA 2 cut(s) 464, 492
Sau96I GGNCC 6 cut(s) 213, 298, 531, 816, 951, 1009
SchI GAGTC 3 cut(s) 533, 1075, 1144
ScrFI CCNGG 9 cut(s) 211, 287, 529, 783, 930, 959, 960, 1209, 1256
SduI GDGCHC 3 cut(s) 158, 672, 1071
SexAI ACCWGGT 1 cut(s) 285
SfaNI GCATC 2 cut(s) 1348, 1396
SfoI GGCGCC 1 cut(s) 451
Sfr274I CTCGAG 2 cut(s) 1028, 1141
SinI GGWCC 3 cut(s) 298, 816, 951
SlaI CTCGAG 2 cut(s) 1028, 1141
SmaI CCCGGG 1 cut(s) 960
SmlI CTYRAG 4 cut(s) 191, 684, 1028, 1141
SmoI CTYRAG 4 cut(s) 191, 684, 1028, 1141
Sse9I AATT 2 cut(s) 370, 796
SspDI GGCGCC 1 cut(s) 449
SspMI CTAG 1 cut(s) 1016
SstI GAGCTC 1 cut(s) 1071
StyD4I CCNGG 9 cut(s) 209, 285, 527, 781, 928, 957, 958, 1207, 1254
StyI CCWWGG 2 cut(s) 201, 1004
TaaI ACNGT 5 cut(s) 229, 298, 1061, 1172, 1288
TaiI ACGT 2 cut(s) 1053, 1344
TasI AATT 2 cut(s) 370, 796
TatI WGTACW 1 cut(s) 697
TfiI GAWTC 1 cut(s) 645
Tru1I TTAA 2 cut(s) 464, 492
Tru9I TTAA 2 cut(s) 464, 492
TseFI GTSAC 2 cut(s) 907, 1342
TseI GCWGC 5 cut(s) 715, 802, 1000, 1243, 1450
Tsp45I GTSAC 2 cut(s) 907, 1342
TspDTI ATGAA 1 cut(s) 637
TspGWI ACGGA 4 cut(s) 141, 181, 678, 1367
TspMI CCCGGG 1 cut(s) 958
VpaK11BI GGWCC 3 cut(s) 298, 816, 951
XhoI CTCGAG 2 cut(s) 1028, 1141
XmaI CCCGGG 1 cut(s) 958
XmiI GTMKAC 1 cut(s) 432
XspI CTAG 1 cut(s) 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.