RLG00000015178

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0016745
Physical Location & Seq
Forward (+)
62703573 .. 62705042
1470 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015178

Sequence Viewer

Length: 1335 bp
ATGGATCCGTGCCCGTTCGTACGGATCCTCATCGGAGACTTGACCCTCAAGTTTCCCAGCGTCTCCAAACCCTCCTTCTCCACCGTCCACCCTTCCTCCTCTCCCTGCTTCTGCAAAATCAAGCTCACCAACTTCCCCCACCAGTTCTCCGCCGTCCCCGTCATCCTCGACGACTCCGCCTCCGCCGCTCAGACCACCACCACCACGGCCGCCGCCCGCTCCCACTCCCTCAACGCCTGCTTCAACCTCACCAAGCCCCATATCGAAACCCTCGCCTCCAAGCGCCCCAGCCTCTCCATCTCGATCTACACCGGCCGCCGCGGCGCCACCTGCGGCCTCAACTCCGCCAAGCTCCTCGGCCGCGTCACCGTCCCTCTCGCCGAGCTCGCCACCGCCGTGTCCCGCCCCATGGTCTACCAGAACGGCTGGATTGGAATCGGTGGGAAGAAGTCCGGGTCCGGATCCTCTCAGTCGCAATTCTTTTTAAGCGTCCGGGCCGAACCCGACCCGAGATTCGTGTTCAAGTTCGACGGAGAACCCGAGTGTAGCCCTCAGGTTTTTCAGGTCCAGGGAAATGTAAAGCAGCCGGTCTTCACTTGCAAATTTGGGTTCAGAAACGCCTCCGATATGCAATCACGGTCAATGTCCGAGCCGGGTACCCCAAGGAATTGGTTAGTGCCGTTTATGGGAGGCAACCAAAAGGAGCAGGGCTTGAAAGAGAGGAAAGGCTGGTCGCTGACGATCCACGACCTTTCCGGCTCGCCGGTCGCGGCGGCGTCTATGGTGACTCCCTTCGTCGCCTCTCCCGGTTCGCAGCGCGTGAGCCGGTCGAACCCAGGCGCGTGGCTGATTTTACGACCGGAGGACGGCACGTGGAAGCCGTGGGGCCGACTCGAGACGTGGCTGGAGCGCGGCGGCTCCGACACCGTCGGGTACAAGTTCGAGCTGCTCAGCACGATTCTGGCCAACTCCACCGTCAGCGCGTCGAACGGCGGGAAGTTCACGATTGACTTGACGTCGAGTCTGACGCCGGTGAACAGCCCGCACAGCAGCTTCGACTTCGGGTCCGGGTCGGGTTCATCGAGGCCCGGGTCGGGTTCCGGGTCGGACTTCGGGTTCGGGTTGATACCTCAGCTGCTGCAGAGAGGGTTTGTGATGTCGTCGACGGTGGAGGGGATAGGGAAGTGTAGCAAACCGGAGGTGGAGGTCGGAGTGCAGCACGTGACATGCACGGAGGACGCGGCCGCTTACGTGGCGTTGGCGGCGGCGATGGATCTGAGCATGGATGCTTGCCGGCCGTTTTCACATAAGCTCCGGAAGGAGCTGAGGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

445

Amino Acids

47.57

Weight (kDa)

9.3

Isoelectric Point (pI)

48.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 1 - 443 7.5e-186 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016745)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03010
malus_domestica MD05G1108400.v1.1
prunus_persica Prupe.8G152100_v2.0.a1
pyrus_communis pycom05g10440
rosa_chinensis RchiOBHm_Chr6g0247801
rosa_laevigata RLG00000015178
rosa_roxburghii Rroxscaffold_180G00433230 Rroxscaffold_7G00213640
rosa_rugosa Rorug05G0529000
rosa_samantha Rh6AG043800 Rh6BG038600 Rh6CG037300 Rh6DG034400
rosa_wichuraiana Rw6G003800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 338
AatII GACGTC 1 cut(s) 1019
Acc36I ACCTGC 1 cut(s) 338
Acc65I GGTACC 1 cut(s) 656
AccB1I GGYRCC 2 cut(s) 323, 656
AccBSI CCGCTC 2 cut(s) 188, 219
AccI GTMKAC 2 cut(s) 414, 1163
AccII CGCG 8 cut(s) 321, 363, 770, 819, 842, 912, 983, 1241
AccIII TCCGGA 2 cut(s) 458, 1314
AclWI GGATC 7 cut(s) 12, 19, 32, 456, 469, 736, 1281
AcoI YGGCCR 6 cut(s) 207, 313, 358, 963, 1242, 1295
AcsI RAATTY 1 cut(s) 602
AcvI CACGTG 2 cut(s) 873, 1222
AcyI GRCGYC 4 cut(s) 324, 776, 1016, 1028
AfaI GTAC 3 cut(s) 21, 658, 935
AfiI CCNNNNNNNGG 4 cut(s) 409, 686, 866, 1094
AgsI TTSAA 3 cut(s) 244, 523, 715
AhdI GACNNNNNGTC 3 cut(s) 1015, 1020, 1063
AjiI CACGTC 1 cut(s) 900
AjnI CCWGG 2 cut(s) 567, 835
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AleI CACNNNNGTG 1 cut(s) 395
AloI GAACNNNNNNTCC 2 cut(s) 1100, 1132
AluBI AGCT 8 cut(s) 124, 352, 385, 946, 1053, 1135, 1312, 1324
AluI AGCT 8 cut(s) 124, 352, 385, 946, 1053, 1135, 1312, 1324
Alw21I GWGCWC 1 cut(s) 387
Alw26I GTCTC 3 cut(s) 30, 67, 890
AlwI GGATC 7 cut(s) 12, 19, 32, 456, 469, 736, 1281
AlwNI CAGNNNCTG 1 cut(s) 1138
Ama87I CYCGRG 4 cut(s) 508, 539, 893, 1088
Aor13HI TCCGGA 2 cut(s) 458, 1314
ApeKI GCWGC 7 cut(s) 583, 814, 946, 1050, 1135, 1138, 1216
ApoI RAATTY 1 cut(s) 602
ArsI GACNNNNNNTTYG 4 cut(s) 497, 529, 1100, 1132
Asp718I GGTACC 1 cut(s) 656
AspLEI GCGC 6 cut(s) 285, 326, 819, 842, 912, 983
AspS9I GGNCC 6 cut(s) 456, 495, 565, 886, 1065, 1086
AsuC2I CCSGG 8 cut(s) 454, 494, 654, 807, 1069, 1089, 1090, 1102
AsuHPI GGTGA 5 cut(s) 118, 241, 358, 796, 1045
AvaI CYCGRG 4 cut(s) 508, 539, 893, 1088
AvaII GGWCC 3 cut(s) 456, 565, 1065
AxyI CCTNAGG 1 cut(s) 552
BaeGI GKGCMC 1 cut(s) 14
BalI TGGCCA 1 cut(s) 965
BamHI GGATCC 3 cut(s) 4, 24, 461
BanI GGYRCC 2 cut(s) 323, 656
BanII GRGCYC 1 cut(s) 387
BbrPI CACGTG 2 cut(s) 873, 1222
BbsI GAAGAC 1 cut(s) 583
Bbv12I GWGCWC 1 cut(s) 387
BbvCI CCTCAGC 2 cut(s) 1131, 1325
BbvI GCAGC 7 cut(s) 595, 826, 933, 1062, 1122, 1125, 1228
BccI CCATC 2 cut(s) 305, 1264
BceAI ACGGC 9 cut(s) 137, 222, 380, 439, 664, 865, 883, 1006, 1282
BciT130I CCWGG 2 cut(s) 569, 837
BcnI CCSGG 8 cut(s) 454, 494, 654, 807, 1069, 1089, 1090, 1102
BcoDI GTCTC 3 cut(s) 30, 67, 890
BfmI CTRYAG 1 cut(s) 1139
BfoI RGCGCY 2 cut(s) 286, 327
BfuAI ACCTGC 1 cut(s) 338
BglI GCCNNNNNGGC 1 cut(s) 321
BlpI GCTNAGC 1 cut(s) 950
Bme18I GGWCC 3 cut(s) 456, 565, 1065
BmeRI GACNNNNNGTC 3 cut(s) 1015, 1020, 1063
BmeT110I CYCGRG 4 cut(s) 508, 539, 893, 1088
BmgBI CACGTC 1 cut(s) 900
BmgT120I GGNCC 6 cut(s) 456, 495, 565, 886, 1065, 1086
BmsI GCATC 1 cut(s) 1276
BpiI GAAGAC 1 cut(s) 583
BpmI CTGGAG 1 cut(s) 926
Bpu10I CCTNAGC 2 cut(s) 1131, 1325
Bpu1102I GCTNAGC 1 cut(s) 950
BpuEI CTTGAG 1 cut(s) 32
BpuMI CCSGG 8 cut(s) 454, 494, 654, 807, 1069, 1089, 1090, 1102
BsaAI YACGTR 3 cut(s) 873, 1222, 1252
BsaBI GATNNNNATC 2 cut(s) 29, 434
BsaHI GRCGYC 4 cut(s) 324, 776, 1016, 1028
BsaJI CCNNGG 9 cut(s) 204, 319, 355, 408, 568, 662, 835, 881, 1088
BsaWI WCCGGW 4 cut(s) 458, 859, 1195, 1314
BsaXI ACNNNNNCTCC 8 cut(s) 80, 110, 131, 161, 164, 194, 1296, 1326
Bsc4I CCNNNNNNNGG 4 cut(s) 409, 686, 866, 1094
Bse118I RCCGGY 6 cut(s) 311, 586, 763, 825, 1030, 1293
Bse1I ACTGG 1 cut(s) 142
Bse21I CCTNAGG 1 cut(s) 552
Bse8I GATNNNNATC 2 cut(s) 29, 434
BseAI TCCGGA 2 cut(s) 458, 1314
BseBI CCWGG 2 cut(s) 569, 837
BseDI CCNNGG 9 cut(s) 204, 319, 355, 408, 568, 662, 835, 881, 1088
BseGI GGATG 2 cut(s) 162, 1291
BseJI GATNNNNATC 2 cut(s) 29, 434
BseLI CCNNNNNNNGG 4 cut(s) 409, 686, 866, 1094
BseMII CTCAG 7 cut(s) 203, 482, 566, 964, 1145, 1268, 1316
BseNI ACTGG 1 cut(s) 142
BseRI GAGGAG 2 cut(s) 88, 344
BseSI GKGCMC 1 cut(s) 14
BseX3I CGGCCG 5 cut(s) 207, 313, 358, 1242, 1295
BseXI GCAGC 7 cut(s) 595, 826, 933, 1062, 1122, 1125, 1228
BseYI CCCAGC 2 cut(s) 56, 287
BsgI GTGCAG 1 cut(s) 1235
Bsh1236I CGCG 8 cut(s) 321, 363, 770, 819, 842, 912, 983, 1241
Bsh1285I CGRYCG 8 cut(s) 210, 316, 361, 768, 830, 860, 1245, 1298
BshNI GGYRCC 2 cut(s) 323, 656
BsiEI CGRYCG 8 cut(s) 210, 316, 361, 768, 830, 860, 1245, 1298
BsiHKAI GWGCWC 1 cut(s) 387
BsiHKCI CYCGRG 4 cut(s) 508, 539, 893, 1088
BsiWI CGTACG 1 cut(s) 19
BslFI GGGAC 3 cut(s) 140, 356, 385
BslI CCNNNNNNNGG 4 cut(s) 409, 686, 866, 1094
BsmAI GTCTC 3 cut(s) 30, 67, 890
BsmBI CGTCTC 2 cut(s) 67, 890
BsmFI GGGAC 3 cut(s) 140, 356, 385
BsoBI CYCGRG 4 cut(s) 508, 539, 893, 1088
Bsp1286I GDGCHC 2 cut(s) 14, 387
Bsp13I TCCGGA 2 cut(s) 458, 1314
Bsp143I GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
Bsp1720I GCTNAGC 1 cut(s) 950
Bsp19I CCATGG 1 cut(s) 408
BspCNI CTCAG 7 cut(s) 202, 481, 565, 963, 1144, 1269, 1317
BspEI TCCGGA 2 cut(s) 458, 1314
BspFNI CGCG 8 cut(s) 321, 363, 770, 819, 842, 912, 983, 1241
BspMAI CTGCAG 1 cut(s) 1143
BspMI ACCTGC 1 cut(s) 338
BspPI GGATC 7 cut(s) 12, 19, 32, 456, 469, 736, 1281
BspT107I GGYRCC 2 cut(s) 323, 656
BsrBI CCGCTC 2 cut(s) 188, 219
BsrFI RCCGGY 6 cut(s) 311, 586, 763, 825, 1030, 1293
BsrI ACTGG 1 cut(s) 142
BssAI RCCGGY 6 cut(s) 311, 586, 763, 825, 1030, 1293
BssECI CCNNGG 9 cut(s) 204, 319, 355, 408, 568, 662, 835, 881, 1088
BssMI GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
BssNI GRCGYC 4 cut(s) 324, 776, 1016, 1028
BssT1I CCWWGG 2 cut(s) 408, 662
Bst2UI CCWGG 2 cut(s) 569, 837
Bst4CI ACNGT 6 cut(s) 85, 370, 639, 928, 976, 1168
BstACI GRCGYC 4 cut(s) 324, 776, 1016, 1028
BstBAI YACGTR 3 cut(s) 873, 1222, 1252
BstC8I GCNNGC 7 cut(s) 217, 238, 387, 761, 1043, 1291, 1295
BstDEI CTNAG 7 cut(s) 189, 468, 552, 950, 1131, 1277, 1325
BstDSI CCRYGG 4 cut(s) 204, 319, 408, 881
BstF5I GGATG 2 cut(s) 162, 1291
BstFNI CGCG 8 cut(s) 321, 363, 770, 819, 842, 912, 983, 1241
BstH2I RGCGCY 2 cut(s) 286, 327
BstHHI GCGC 6 cut(s) 285, 326, 819, 842, 912, 983
BstKTI GATC 6 cut(s) 7, 27, 306, 464, 744, 1276
BstMAI GTCTC 3 cut(s) 30, 67, 890
BstMBI GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
BstMCI CGRYCG 8 cut(s) 210, 316, 361, 768, 830, 860, 1245, 1298
BstMWI GCNNNNNNNGC 7 cut(s) 185, 321, 330, 386, 1047, 1253, 1262
BstNI CCWGG 2 cut(s) 569, 837
BstNSI RCATGY 1 cut(s) 1230
BstSFI CTRYAG 1 cut(s) 1139
BstSLI GKGCMC 1 cut(s) 14
BstUI CGCG 8 cut(s) 321, 363, 770, 819, 842, 912, 983, 1241
BstV1I GCAGC 7 cut(s) 595, 826, 933, 1062, 1122, 1125, 1228
BstV2I GAAGAC 1 cut(s) 583
BstX2I RGATCY 4 cut(s) 4, 24, 461, 1273
BstXI CCANNNNNNTGG 2 cut(s) 669, 843
BstYI RGATCY 4 cut(s) 4, 24, 461, 1273
BstZI CGGCCG 5 cut(s) 207, 313, 358, 1242, 1295
Bsu36I CCTNAGG 1 cut(s) 552
BtgI CCRYGG 4 cut(s) 204, 319, 408, 881
BtgZI GCGATG 1 cut(s) 1283
BtrI CACGTC 1 cut(s) 900
BtsCI GGATG 2 cut(s) 162, 1291
BveI ACCTGC 1 cut(s) 338
Cac8I GCNNGC 7 cut(s) 217, 238, 387, 761, 1043, 1291, 1295
CaiI CAGNNNCTG 1 cut(s) 1138
CciNI GCGGCCGC 1 cut(s) 1242
CfoI GCGC 6 cut(s) 285, 326, 819, 842, 912, 983
Cfr10I RCCGGY 6 cut(s) 311, 586, 763, 825, 1030, 1293
Cfr13I GGNCC 6 cut(s) 456, 495, 565, 886, 1065, 1086
Cfr42I CCGCGG 1 cut(s) 322
Cfr9I CCCGGG 1 cut(s) 1088
CseI GACGC 7 cut(s) 49, 352, 478, 765, 972, 1036, 1247
Csp6I GTAC 3 cut(s) 20, 657, 934
CviAII CATG 3 cut(s) 409, 1227, 1282
CviQI GTAC 3 cut(s) 20, 657, 934
DdeI CTNAG 7 cut(s) 189, 468, 552, 950, 1131, 1277, 1325
DinI GGCGCC 1 cut(s) 325
DpnI GATC 6 cut(s) 6, 26, 305, 463, 743, 1275
DpnII GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
DriI GACNNNNNGTC 3 cut(s) 1015, 1020, 1063
EaeI YGGCCR 6 cut(s) 207, 313, 358, 963, 1242, 1295
EagI CGGCCG 5 cut(s) 207, 313, 358, 1242, 1295
Eam1105I GACNNNNNGTC 3 cut(s) 1015, 1020, 1063
EciI GGCGGA 4 cut(s) 139, 166, 172, 334
Ecl136II GAGCTC 1 cut(s) 385
EclXI CGGCCG 5 cut(s) 207, 313, 358, 1242, 1295
Eco130I CCWWGG 2 cut(s) 408, 662
Eco24I GRGCYC 1 cut(s) 387
Eco47I GGWCC 3 cut(s) 456, 565, 1065
Eco52I CGGCCG 5 cut(s) 207, 313, 358, 1242, 1295
Eco53kI GAGCTC 1 cut(s) 385
Eco72I CACGTG 2 cut(s) 873, 1222
Eco81I CCTNAGG 1 cut(s) 552
Eco88I CYCGRG 4 cut(s) 508, 539, 893, 1088
EcoICRI GAGCTC 1 cut(s) 385
EcoRII CCWGG 2 cut(s) 567, 835
EcoT14I CCWWGG 2 cut(s) 408, 662
EcoT38I GRGCYC 1 cut(s) 387
EgeI GGCGCC 1 cut(s) 325
EheI GGCGCC 1 cut(s) 325
ErhI CCWWGG 2 cut(s) 408, 662
Esp3I CGTCTC 2 cut(s) 67, 890
FaeI CATG 3 cut(s) 412, 1230, 1285
FaiI YATR 8 cut(s) 261, 410, 629, 686, 782, 1228, 1283, 1308
FaqI GGGAC 3 cut(s) 140, 356, 385
FatI CATG 3 cut(s) 408, 1226, 1281
FauI CCCGC 4 cut(s) 224, 410, 986, 1050
FblI GTMKAC 2 cut(s) 414, 1163
FokI GGATG 2 cut(s) 149, 1298
FriOI GRGCYC 1 cut(s) 387
GlaI GCGC 6 cut(s) 284, 325, 818, 841, 911, 982
GsaI CCCAGC 2 cut(s) 60, 291
GsuI CTGGAG 1 cut(s) 926
HaeII RGCGCY 2 cut(s) 286, 327
HgaI GACGC 7 cut(s) 49, 352, 478, 765, 972, 1036, 1247
HhaI GCGC 6 cut(s) 285, 326, 819, 842, 912, 983
Hin1I GRCGYC 4 cut(s) 324, 776, 1016, 1028
Hin1II CATG 3 cut(s) 412, 1230, 1285
Hin6I GCGC 6 cut(s) 283, 324, 817, 840, 910, 981
HinP1I GCGC 6 cut(s) 283, 324, 817, 840, 910, 981
HincII GTYRAC 1 cut(s) 1164
HindII GTYRAC 1 cut(s) 1164
HinfI GANTC 7 cut(s) 173, 435, 513, 787, 891, 958, 1021
HphI GGTGA 5 cut(s) 118, 241, 358, 796, 1045
Hpy166II GTNNAC 5 cut(s) 88, 415, 1002, 1036, 1164
Hpy188III TCNNGA 5 cut(s) 301, 459, 895, 1003, 1315
Hpy8I GTNNAC 5 cut(s) 88, 415, 1002, 1036, 1164
Hpy99I CGWCG 8 cut(s) 173, 533, 800, 932, 988, 1021, 1165, 1168
HpyAV CCTTC 4 cut(s) 85, 102, 802, 1312
HpyCH4III ACNGT 6 cut(s) 85, 370, 639, 928, 976, 1168
HpyCH4IV ACGT 5 cut(s) 872, 899, 1016, 1221, 1251
HpyCH4V TGCA 6 cut(s) 114, 600, 631, 1141, 1216, 1230
HpyF10VI GCNNNNNNNGC 7 cut(s) 185, 321, 330, 386, 1047, 1253, 1262
HpyF3I CTNAG 7 cut(s) 189, 468, 552, 950, 1131, 1277, 1325
HpySE526I ACGT 5 cut(s) 872, 899, 1016, 1221, 1251
Hsp92I GRCGYC 4 cut(s) 324, 776, 1016, 1028
Hsp92II CATG 3 cut(s) 412, 1230, 1285
HspAI GCGC 6 cut(s) 283, 324, 817, 840, 910, 981
KasI GGCGCC 1 cut(s) 323
Kpn2I TCCGGA 2 cut(s) 458, 1314
KpnI GGTACC 1 cut(s) 660
KroI GCCGGC 1 cut(s) 1293
KroNI GCCGGC 1 cut(s) 1295
KspI CCGCGG 1 cut(s) 322
Kzo9I GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
LmnI GCTCC 7 cut(s) 224, 357, 703, 907, 923, 1317, 1321
Lsp1109I GCAGC 7 cut(s) 595, 826, 933, 1062, 1122, 1125, 1228
LweI GCATC 1 cut(s) 1276
MaeII ACGT 5 cut(s) 872, 899, 1016, 1221, 1251
MaeIII GTNAC 3 cut(s) 364, 784, 1222
MalI GATC 6 cut(s) 6, 26, 305, 463, 743, 1275
MbiI CCGCTC 2 cut(s) 188, 219
MboI GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
MboII GAAGA 2 cut(s) 457, 583
MflI RGATCY 4 cut(s) 4, 24, 461, 1273
MhlI GDGCHC 2 cut(s) 14, 387
MlsI TGGCCA 1 cut(s) 965
MluCI AATT 3 cut(s) 476, 602, 667
MluNI TGGCCA 1 cut(s) 965
Mly113I GGCGCC 1 cut(s) 324
MlyI GAGTC 4 cut(s) 167, 781, 885, 1030
MmeI TCCRAC 3 cut(s) 945, 1086, 1189
Mox20I TGGCCA 1 cut(s) 965
MroI TCCGGA 2 cut(s) 458, 1314
MroNI GCCGGC 1 cut(s) 1293
MscI TGGCCA 1 cut(s) 965
MseI TTAA 1 cut(s) 485
MslI CAYNNNNRTG 1 cut(s) 395
Msp20I TGGCCA 1 cut(s) 965
MspA1I CMGCKG 2 cut(s) 321, 1135
MvaI CCWGG 2 cut(s) 569, 837
MvnI CGCG 8 cut(s) 321, 363, 770, 819, 842, 912, 983, 1241
MwoI GCNNNNNNNGC 7 cut(s) 185, 321, 330, 386, 1047, 1253, 1262
NaeI GCCGGC 1 cut(s) 1295
NarI GGCGCC 1 cut(s) 324
NciI CCSGG 8 cut(s) 454, 494, 654, 807, 1069, 1089, 1090, 1102
NcoI CCATGG 1 cut(s) 408
NdeII GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
NgoMIV GCCGGC 1 cut(s) 1293
NlaIII CATG 3 cut(s) 412, 1230, 1285
NmeAIII GCCGAG 2 cut(s) 336, 406
NmuCI GTSAC 3 cut(s) 364, 784, 1222
NotI GCGGCCGC 1 cut(s) 1242
NspI RCATGY 1 cut(s) 1230
OliI CACNNNNGTG 1 cut(s) 395
PaeR7I CTCGAG 1 cut(s) 893
PaqCI CACCTGC 1 cut(s) 338
PcsI WCGNNNNNNNCGW 4 cut(s) 393, 537, 878, 1079
PdiI GCCGGC 1 cut(s) 1295
PfeI GAWTC 3 cut(s) 435, 513, 958
Pfl23II CGTACG 1 cut(s) 19
PflFI GACNNNGTC 1 cut(s) 926
PleI GAGTC 4 cut(s) 167, 781, 885, 1029
PluTI GGCGCC 1 cut(s) 327
PmaCI CACGTG 2 cut(s) 873, 1222
PmlI CACGTG 2 cut(s) 873, 1222
PpsI GAGTC 4 cut(s) 167, 781, 885, 1029
Ppu21I YACGTR 3 cut(s) 873, 1222, 1252
Psp124BI GAGCTC 1 cut(s) 387
Psp6I CCWGG 2 cut(s) 567, 835
PspCI CACGTG 2 cut(s) 873, 1222
PspFI CCCAGC 2 cut(s) 56, 287
PspGI CCWGG 2 cut(s) 567, 835
PspLI CGTACG 1 cut(s) 19
PspPI GGNCC 6 cut(s) 456, 495, 565, 886, 1065, 1086
PstI CTGCAG 1 cut(s) 1143
PstNI CAGNNNCTG 1 cut(s) 1138
PsuI RGATCY 4 cut(s) 4, 24, 461, 1273
PsyI GACNNNGTC 1 cut(s) 926
PvuII CAGCTG 1 cut(s) 1135
RsaI GTAC 3 cut(s) 21, 658, 935
RsaNI GTAC 3 cut(s) 20, 657, 934
RseI CAYNNNNRTG 1 cut(s) 395
SacI GAGCTC 1 cut(s) 387
SacII CCGCGG 1 cut(s) 322
SalI GTCGAC 1 cut(s) 1162
SaqAI TTAA 1 cut(s) 485
Sau3AI GATC 6 cut(s) 4, 24, 303, 461, 741, 1273
Sau96I GGNCC 6 cut(s) 456, 495, 565, 886, 1065, 1086
SchI GAGTC 4 cut(s) 167, 781, 885, 1030
SduI GDGCHC 2 cut(s) 14, 387
SfaNI GCATC 1 cut(s) 1276
SfcI CTRYAG 1 cut(s) 1139
SfoI GGCGCC 1 cut(s) 325
Sfr274I CTCGAG 1 cut(s) 893
Sfr303I CCGCGG 1 cut(s) 322
SgrAI CRCCGGYG 1 cut(s) 1030
SgrBI CCGCGG 1 cut(s) 322
SgrDI CGTCGACG 1 cut(s) 1162
SinI GGWCC 3 cut(s) 456, 565, 1065
SlaI CTCGAG 1 cut(s) 893
SmaI CCCGGG 1 cut(s) 1090
SmiMI CAYNNNNRTG 1 cut(s) 395
SmlI CTYRAG 2 cut(s) 47, 893
SmoI CTYRAG 2 cut(s) 47, 893
Sse9I AATT 3 cut(s) 476, 602, 667
SspDI GGCGCC 1 cut(s) 323
SstI GAGCTC 1 cut(s) 387
StyI CCWWGG 2 cut(s) 408, 662
TaaI ACNGT 6 cut(s) 85, 370, 639, 928, 976, 1168
TaiI ACGT 5 cut(s) 875, 902, 1019, 1224, 1254
TasI AATT 3 cut(s) 476, 602, 667
TfiI GAWTC 3 cut(s) 435, 513, 958
Tru1I TTAA 1 cut(s) 485
Tru9I TTAA 1 cut(s) 485
TseFI GTSAC 3 cut(s) 364, 784, 1222
TseI GCWGC 7 cut(s) 583, 814, 946, 1050, 1135, 1138, 1216
Tsp45I GTSAC 3 cut(s) 364, 784, 1222
TspDTI ATGAA 1 cut(s) 1068
TspGWI ACGGA 3 cut(s) 37, 546, 1247
TspMI CCCGGG 1 cut(s) 1088
Tth111I GACNNNGTC 1 cut(s) 926
VpaK11BI GGWCC 3 cut(s) 456, 565, 1065
XapI RAATTY 1 cut(s) 602
XceI RCATGY 1 cut(s) 1230
XhoI CTCGAG 1 cut(s) 893
XmaI CCCGGG 1 cut(s) 1088
XmiI GTMKAC 2 cut(s) 414, 1163
ZraI GACGTC 1 cut(s) 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.