Protein of unknown function (DUF1005)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g03010 |
| malus_domestica | MD05G1108400.v1.1 |
| prunus_persica | Prupe.8G152100_v2.0.a1 |
| pyrus_communis | pycom05g10440 |
| rosa_chinensis | RchiOBHm_Chr6g0247801 |
| rosa_laevigata | RLG00000015178 |
| rosa_roxburghii | Rroxscaffold_180G00433230 Rroxscaffold_7G00213640 |
| rosa_rugosa | Rorug05G0529000 |
| rosa_samantha | Rh6AG043800 Rh6BG038600 Rh6CG037300 Rh6DG034400 |
| rosa_wichuraiana | Rw6G003800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1052 |
| Acc36I | ACCTGC | 1 cut(s) | 1208 |
| Acc65I | GGTACC | 1 cut(s) | 909 |
| AccB1I | GGYRCC | 1 cut(s) | 909 |
| AccBSI | CCGCTC | 2 cut(s) | 160, 697 |
| AccI | GTMKAC | 1 cut(s) | 288 |
| AccII | CGCG | 7 cut(s) | 185, 284, 646, 689, 795, 888, 941 |
| AccIII | TCCGGA | 2 cut(s) | 1073, 1287 |
| AcoI | YGGCCR | 3 cut(s) | 175, 192, 1268 |
| AcuI | CTGAAG | 1 cut(s) | 580 |
| AcvI | CACGTG | 1 cut(s) | 1195 |
| AcyI | GRCGYC | 2 cut(s) | 752, 1049 |
| AdeI | CACNNNGTG | 1 cut(s) | 796 |
| AfaI | GTAC | 4 cut(s) | 21, 911, 1113, 1188 |
| AgsI | TTSAA | 4 cut(s) | 226, 232, 277, 548 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1039 |
| AjnI | CCWGG | 6 cut(s) | 65, 141, 383, 634, 781, 1107 |
| AluBI | AGCT | 6 cut(s) | 327, 367, 922, 1017, 1029, 1297 |
| AluI | AGCT | 6 cut(s) | 327, 367, 922, 1017, 1029, 1297 |
| Alw21I | GWGCWC | 1 cut(s) | 924 |
| Alw26I | GTCTC | 2 cut(s) | 151, 242 |
| Ama87I | CYCGRG | 5 cut(s) | 493, 524, 811, 881, 994 |
| Aor13HI | TCCGGA | 2 cut(s) | 1073, 1287 |
| AoxI | GGCC | 8 cut(s) | 60, 68, 175, 192, 386, 480, 862, 1268 |
| ApeKI | GCWGC | 7 cut(s) | 568, 655, 853, 1026, 1096, 1217, 1303 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 482, 514, 1073, 1105 |
| Asp718I | GGTACC | 1 cut(s) | 909 |
| AspLEI | GCGC | 4 cut(s) | 187, 689, 888, 959 |
| AspS9I | GGNCC | 7 cut(s) | 69, 154, 387, 480, 669, 804, 862 |
| AsuC2I | CCSGG | 4 cut(s) | 479, 812, 813, 1062 |
| AsuHPI | GGTGA | 1 cut(s) | 772 |
| AvaI | CYCGRG | 5 cut(s) | 493, 524, 811, 881, 994 |
| AvaII | GGWCC | 3 cut(s) | 154, 669, 804 |
| BaeGI | GKGCMC | 1 cut(s) | 14 |
| BamHI | GGATCC | 3 cut(s) | 4, 24, 1070 |
| BanI | GGYRCC | 1 cut(s) | 909 |
| BanII | GRGCYC | 3 cut(s) | 308, 525, 924 |
| BbrPI | CACGTG | 1 cut(s) | 1195 |
| BbsI | GAAGAC | 1 cut(s) | 568 |
| Bbv12I | GWGCWC | 1 cut(s) | 924 |
| BbvCI | CCTCAGC | 1 cut(s) | 1298 |
| BbvI | GCAGC | 6 cut(s) | 580, 642, 865, 1038, 1083, 1204 |
| BccI | CCATC | 2 cut(s) | 278, 751 |
| BceAI | ACGGC | 4 cut(s) | 190, 207, 454, 1255 |
| BciT130I | CCWGG | 6 cut(s) | 67, 143, 385, 636, 783, 1109 |
| BcnI | CCSGG | 4 cut(s) | 479, 812, 813, 1062 |
| BcoDI | GTCTC | 2 cut(s) | 151, 242 |
| BfaI | CTAG | 1 cut(s) | 869 |
| BfuAI | ACCTGC | 1 cut(s) | 1208 |
| Bme18I | GGWCC | 3 cut(s) | 154, 669, 804 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1039 |
| BmeT110I | CYCGRG | 5 cut(s) | 493, 524, 811, 881, 994 |
| BmgT120I | GGNCC | 7 cut(s) | 69, 154, 387, 480, 669, 804, 862 |
| BmsI | GCATC | 2 cut(s) | 1201, 1249 |
| BpiI | GAAGAC | 1 cut(s) | 568 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 807, 839 |
| BpmI | CTGGAG | 2 cut(s) | 49, 908 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1298 |
| BpuEI | CTTGAG | 2 cut(s) | 32, 522 |
| BpuMI | CCSGG | 4 cut(s) | 479, 812, 813, 1062 |
| BsaAI | YACGTR | 2 cut(s) | 1195, 1225 |
| BsaBI | GATNNNNATC | 3 cut(s) | 716, 1069, 1075 |
| BsaHI | GRCGYC | 2 cut(s) | 752, 1049 |
| BsaI | GGTCTC | 1 cut(s) | 151 |
| BsaJI | CCNNGG | 7 cut(s) | 57, 150, 553, 741, 811, 857, 952 |
| BsaWI | WCCGGW | 2 cut(s) | 1073, 1287 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 80, 110, 131, 161, 191, 221 |
| Bse118I | RCCGGY | 5 cut(s) | 571, 801, 864, 1006, 1266 |
| Bse3DI | GCAATG | 2 cut(s) | 448, 1248 |
| Bse8I | GATNNNNATC | 3 cut(s) | 716, 1069, 1075 |
| BseAI | TCCGGA | 2 cut(s) | 1073, 1287 |
| BseBI | CCWGG | 6 cut(s) | 67, 143, 385, 636, 783, 1109 |
| BseDI | CCNNGG | 7 cut(s) | 57, 150, 553, 741, 811, 857, 952 |
| BseGI | GGATG | 2 cut(s) | 825, 1264 |
| BseJI | GATNNNNATC | 3 cut(s) | 716, 1069, 1075 |
| BseMI | GCAATG | 2 cut(s) | 448, 1248 |
| BseMII | CTCAG | 3 cut(s) | 1241, 1289, 1292 |
| BseRI | GAGGAG | 4 cut(s) | 64, 85, 88, 439 |
| BseSI | GKGCMC | 1 cut(s) | 14 |
| BseX3I | CGGCCG | 1 cut(s) | 1268 |
| BseXI | GCAGC | 6 cut(s) | 580, 642, 865, 1038, 1083, 1204 |
| BseYI | CCCAGC | 2 cut(s) | 367, 1103 |
| BsgI | GTGCAG | 1 cut(s) | 1186 |
| Bsh1236I | CGCG | 7 cut(s) | 185, 284, 646, 689, 795, 888, 941 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1271 |
| BshFI | GGCC | 8 cut(s) | 62, 70, 177, 194, 388, 482, 864, 1270 |
| BshNI | GGYRCC | 1 cut(s) | 909 |
| BsiEI | CGRYCG | 1 cut(s) | 1271 |
| BsiHKAI | GWGCWC | 1 cut(s) | 924 |
| BsiHKCI | CYCGRG | 5 cut(s) | 493, 524, 811, 881, 994 |
| BslFI | GGGAC | 4 cut(s) | 50, 140, 682, 1060 |
| BsmAI | GTCTC | 2 cut(s) | 151, 242 |
| BsmFI | GGGAC | 4 cut(s) | 50, 140, 682, 1060 |
| BsnI | GGCC | 8 cut(s) | 62, 70, 177, 194, 388, 482, 864, 1270 |
| Bso31I | GGTCTC | 1 cut(s) | 151 |
| BsoBI | CYCGRG | 5 cut(s) | 493, 524, 811, 881, 994 |
| Bsp1286I | GDGCHC | 4 cut(s) | 14, 308, 525, 924 |
| Bsp13I | TCCGGA | 2 cut(s) | 1073, 1287 |
| Bsp19I | CCATGG | 1 cut(s) | 57 |
| Bsp68I | TCGCGA | 1 cut(s) | 941 |
| BspANI | GGCC | 8 cut(s) | 62, 70, 177, 194, 388, 482, 864, 1270 |
| BspCNI | CTCAG | 3 cut(s) | 1242, 1290, 1291 |
| BspEI | TCCGGA | 2 cut(s) | 1073, 1287 |
| BspFNI | CGCG | 7 cut(s) | 185, 284, 646, 689, 795, 888, 941 |
| BspMI | ACCTGC | 1 cut(s) | 1208 |
| BspT107I | GGYRCC | 1 cut(s) | 909 |
| BspTNI | GGTCTC | 1 cut(s) | 151 |
| BsrBI | CCGCTC | 2 cut(s) | 160, 697 |
| BsrDI | GCAATG | 2 cut(s) | 448, 1248 |
| BsrFI | RCCGGY | 5 cut(s) | 571, 801, 864, 1006, 1266 |
| BssAI | RCCGGY | 5 cut(s) | 571, 801, 864, 1006, 1266 |
| BssECI | CCNNGG | 7 cut(s) | 57, 150, 553, 741, 811, 857, 952 |
| BssNI | GRCGYC | 2 cut(s) | 752, 1049 |
| BssT1I | CCWWGG | 3 cut(s) | 57, 553, 857 |
| Bst2UI | CCWGG | 6 cut(s) | 67, 143, 385, 636, 783, 1109 |
| Bst4CI | ACNGT | 4 cut(s) | 85, 154, 914, 1141 |
| BstACI | GRCGYC | 2 cut(s) | 752, 1049 |
| BstBAI | YACGTR | 2 cut(s) | 1195, 1225 |
| BstC8I | GCNNGC | 6 cut(s) | 220, 737, 866, 1166, 1264, 1268 |
| BstDEI | CTNAG | 4 cut(s) | 1036, 1250, 1278, 1298 |
| BstDSI | CCRYGG | 3 cut(s) | 57, 150, 741 |
| BstEII | GGTNACC | 1 cut(s) | 760 |
| BstF5I | GGATG | 2 cut(s) | 825, 1264 |
| BstFNI | CGCG | 7 cut(s) | 185, 284, 646, 689, 795, 888, 941 |
| BstHHI | GCGC | 4 cut(s) | 187, 689, 888, 959 |
| BstMAI | GTCTC | 2 cut(s) | 151, 242 |
| BstMCI | CGRYCG | 1 cut(s) | 1271 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 191, 312, 364, 591, 652, 1023, 1226, 1235, 1303 |
| BstNI | CCWGG | 6 cut(s) | 67, 143, 385, 636, 783, 1109 |
| BstPI | GGTNACC | 1 cut(s) | 760 |
| BstSLI | GKGCMC | 1 cut(s) | 14 |
| BstUI | CGCG | 7 cut(s) | 185, 284, 646, 689, 795, 888, 941 |
| BstV1I | GCAGC | 6 cut(s) | 580, 642, 865, 1038, 1083, 1204 |
| BstV2I | GAAGAC | 1 cut(s) | 568 |
| BstX2I | RGATCY | 4 cut(s) | 4, 24, 1070, 1246 |
| BstYI | RGATCY | 4 cut(s) | 4, 24, 1070, 1246 |
| BstZI | CGGCCG | 1 cut(s) | 1268 |
| BsuRI | GGCC | 8 cut(s) | 62, 70, 177, 194, 388, 482, 864, 1270 |
| BtgI | CCRYGG | 3 cut(s) | 57, 150, 741 |
| BtgZI | GCGATG | 1 cut(s) | 148 |
| BtsCI | GGATG | 2 cut(s) | 825, 1264 |
| BtuMI | TCGCGA | 1 cut(s) | 941 |
| BveI | ACCTGC | 1 cut(s) | 1208 |
| Cac8I | GCNNGC | 6 cut(s) | 220, 737, 866, 1166, 1264, 1268 |
| CfoI | GCGC | 4 cut(s) | 187, 689, 888, 959 |
| Cfr10I | RCCGGY | 5 cut(s) | 571, 801, 864, 1006, 1266 |
| Cfr13I | GGNCC | 7 cut(s) | 69, 154, 387, 480, 669, 804, 862 |
| Cfr9I | CCCGGG | 1 cut(s) | 811 |
| CseI | GACGC | 2 cut(s) | 463, 741 |
| CsiI | ACCWGGT | 1 cut(s) | 141 |
| Csp6I | GTAC | 4 cut(s) | 20, 910, 1112, 1187 |
| CviAII | CATG | 2 cut(s) | 58, 1255 |
| CviQI | GTAC | 4 cut(s) | 20, 910, 1112, 1187 |
| DdeI | CTNAG | 4 cut(s) | 1036, 1250, 1278, 1298 |
| DraIII | CACNNNGTG | 1 cut(s) | 796 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1039 |
| EaeI | YGGCCR | 3 cut(s) | 175, 192, 1268 |
| EagI | CGGCCG | 1 cut(s) | 1268 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1039 |
| EciI | GGCGGA | 4 cut(s) | 67, 392, 473, 821 |
| Ecl136II | GAGCTC | 1 cut(s) | 922 |
| EclXI | CGGCCG | 1 cut(s) | 1268 |
| Eco130I | CCWWGG | 3 cut(s) | 57, 553, 857 |
| Eco24I | GRGCYC | 3 cut(s) | 308, 525, 924 |
| Eco31I | GGTCTC | 1 cut(s) | 151 |
| Eco47I | GGWCC | 3 cut(s) | 154, 669, 804 |
| Eco52I | CGGCCG | 1 cut(s) | 1268 |
| Eco53kI | GAGCTC | 1 cut(s) | 922 |
| Eco57I | CTGAAG | 1 cut(s) | 580 |
| Eco72I | CACGTG | 1 cut(s) | 1195 |
| Eco88I | CYCGRG | 5 cut(s) | 493, 524, 811, 881, 994 |
| Eco91I | GGTNACC | 1 cut(s) | 760 |
| EcoICRI | GAGCTC | 1 cut(s) | 922 |
| EcoO109I | RGGNCCY | 2 cut(s) | 69, 669 |
| EcoO65I | GGTNACC | 1 cut(s) | 760 |
| EcoRII | CCWGG | 6 cut(s) | 65, 141, 383, 634, 781, 1107 |
| EcoT14I | CCWWGG | 3 cut(s) | 57, 553, 857 |
| EcoT38I | GRGCYC | 3 cut(s) | 308, 525, 924 |
| ErhI | CCWWGG | 3 cut(s) | 57, 553, 857 |
| FaeI | CATG | 2 cut(s) | 61, 1258 |
| FaiI | YATR | 2 cut(s) | 59, 1256 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 578, 610 |
| FaqI | GGGAC | 4 cut(s) | 50, 140, 682, 1060 |
| FatI | CATG | 2 cut(s) | 57, 1254 |
| FauI | CCCGC | 3 cut(s) | 165, 308, 962 |
| FblI | GTMKAC | 1 cut(s) | 288 |
| FokI | GGATG | 2 cut(s) | 812, 1271 |
| FriOI | GRGCYC | 3 cut(s) | 308, 525, 924 |
| FspBI | CTAG | 1 cut(s) | 869 |
| GlaI | GCGC | 4 cut(s) | 186, 688, 887, 958 |
| GsaI | CCCAGC | 2 cut(s) | 371, 1107 |
| GsuI | CTGGAG | 2 cut(s) | 49, 908 |
| HaeIII | GGCC | 8 cut(s) | 62, 70, 177, 194, 388, 482, 864, 1270 |
| HgaI | GACGC | 2 cut(s) | 463, 741 |
| HhaI | GCGC | 4 cut(s) | 187, 689, 888, 959 |
| Hin1I | GRCGYC | 2 cut(s) | 752, 1049 |
| Hin1II | CATG | 2 cut(s) | 61, 1258 |
| Hin6I | GCGC | 4 cut(s) | 185, 687, 886, 957 |
| HinP1I | GCGC | 4 cut(s) | 185, 687, 886, 957 |
| HinfI | GANTC | 4 cut(s) | 250, 380, 498, 934 |
| HphI | GGTGA | 1 cut(s) | 772 |
| Hpy166II | GTNNAC | 3 cut(s) | 88, 289, 788 |
| Hpy188I | TCNGA | 7 cut(s) | 364, 402, 599, 898, 1081, 1251, 1281 |
| Hpy8I | GTNNAC | 3 cut(s) | 88, 289, 788 |
| Hpy99I | CGWCG | 8 cut(s) | 35, 176, 457, 518, 757, 908, 1054, 1141 |
| HpyAV | CCTTC | 3 cut(s) | 424, 685, 1285 |
| HpyCH4III | ACNGT | 4 cut(s) | 85, 154, 914, 1141 |
| HpyCH4IV | ACGT | 5 cut(s) | 848, 903, 1049, 1194, 1224 |
| HpyCH4V | TGCA | 4 cut(s) | 114, 585, 610, 1203 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 191, 312, 364, 591, 652, 1023, 1226, 1235, 1303 |
| HpyF3I | CTNAG | 4 cut(s) | 1036, 1250, 1278, 1298 |
| HpySE526I | ACGT | 5 cut(s) | 848, 903, 1049, 1194, 1224 |
| Hsp92I | GRCGYC | 2 cut(s) | 752, 1049 |
| Hsp92II | CATG | 2 cut(s) | 61, 1258 |
| HspAI | GCGC | 4 cut(s) | 185, 687, 886, 957 |
| KflI | GGGWCCC | 1 cut(s) | 669 |
| Kpn2I | TCCGGA | 2 cut(s) | 1073, 1287 |
| KpnI | GGTACC | 1 cut(s) | 913 |
| KroI | GCCGGC | 2 cut(s) | 864, 1266 |
| KroNI | GCCGGC | 2 cut(s) | 866, 1268 |
| LmnI | GCTCC | 9 cut(s) | 311, 452, 679, 694, 815, 899, 927, 1022, 1294 |
| Lsp1109I | GCAGC | 6 cut(s) | 580, 642, 865, 1038, 1083, 1204 |
| LweI | GCATC | 2 cut(s) | 1201, 1249 |
| MabI | ACCWGGT | 1 cut(s) | 141 |
| MaeI | CTAG | 1 cut(s) | 869 |
| MaeII | ACGT | 5 cut(s) | 848, 903, 1049, 1194, 1224 |
| MaeIII | GTNAC | 3 cut(s) | 434, 760, 1195 |
| MbiI | CCGCTC | 2 cut(s) | 160, 697 |
| MboII | GAAGA | 3 cut(s) | 439, 568, 1220 |
| MflI | RGATCY | 4 cut(s) | 4, 24, 1070, 1246 |
| MhlI | GDGCHC | 4 cut(s) | 14, 308, 525, 924 |
| MluCI | AATT | 2 cut(s) | 226, 649 |
| MlyI | GAGTC | 3 cut(s) | 244, 389, 928 |
| MmeI | TCCRAC | 3 cut(s) | 153, 831, 921 |
| MroI | TCCGGA | 2 cut(s) | 1073, 1287 |
| MroNI | GCCGGC | 2 cut(s) | 864, 1266 |
| MseI | TTAA | 2 cut(s) | 320, 348 |
| MspA1I | CMGCKG | 1 cut(s) | 358 |
| MvaI | CCWGG | 6 cut(s) | 67, 143, 385, 636, 783, 1109 |
| MvnI | CGCG | 7 cut(s) | 185, 284, 646, 689, 795, 888, 941 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 191, 312, 364, 591, 652, 1023, 1226, 1235, 1303 |
| NaeI | GCCGGC | 2 cut(s) | 866, 1268 |
| NciI | CCSGG | 4 cut(s) | 479, 812, 813, 1062 |
| NcoI | CCATGG | 1 cut(s) | 57 |
| NgoMIV | GCCGGC | 2 cut(s) | 864, 1266 |
| NlaIII | CATG | 2 cut(s) | 61, 1258 |
| NmeAIII | GCCGAG | 1 cut(s) | 933 |
| NmuCI | GTSAC | 2 cut(s) | 760, 1195 |
| NruI | TCGCGA | 1 cut(s) | 941 |
| PaeR7I | CTCGAG | 2 cut(s) | 881, 994 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 522, 938, 1049 |
| PdiI | GCCGGC | 2 cut(s) | 866, 1268 |
| PfeI | GAWTC | 1 cut(s) | 498 |
| PflFI | GACNNNGTC | 2 cut(s) | 902, 1051 |
| PleI | GAGTC | 3 cut(s) | 244, 388, 928 |
| PmaCI | CACGTG | 1 cut(s) | 1195 |
| PmlI | CACGTG | 1 cut(s) | 1195 |
| PpsI | GAGTC | 3 cut(s) | 244, 388, 928 |
| Ppu21I | YACGTR | 2 cut(s) | 1195, 1225 |
| PpuMI | RGGWCCY | 1 cut(s) | 669 |
| Psp124BI | GAGCTC | 1 cut(s) | 924 |
| Psp5II | RGGWCCY | 1 cut(s) | 669 |
| Psp6I | CCWGG | 6 cut(s) | 65, 141, 383, 634, 781, 1107 |
| PspCI | CACGTG | 1 cut(s) | 1195 |
| PspEI | GGTNACC | 1 cut(s) | 760 |
| PspFI | CCCAGC | 2 cut(s) | 367, 1103 |
| PspGI | CCWGG | 6 cut(s) | 65, 141, 383, 634, 781, 1107 |
| PspPI | GGNCC | 7 cut(s) | 69, 154, 387, 480, 669, 804, 862 |
| PspPPI | RGGWCCY | 1 cut(s) | 669 |
| PspXI | VCTCGAGB | 2 cut(s) | 881, 994 |
| PsuI | RGATCY | 4 cut(s) | 4, 24, 1070, 1246 |
| PsyI | GACNNNGTC | 2 cut(s) | 902, 1051 |
| RruI | TCGCGA | 1 cut(s) | 941 |
| RsaI | GTAC | 4 cut(s) | 21, 911, 1113, 1188 |
| RsaNI | GTAC | 4 cut(s) | 20, 910, 1112, 1187 |
| SacI | GAGCTC | 1 cut(s) | 924 |
| SaqAI | TTAA | 2 cut(s) | 320, 348 |
| Sau96I | GGNCC | 7 cut(s) | 69, 154, 387, 480, 669, 804, 862 |
| SchI | GAGTC | 3 cut(s) | 244, 389, 928 |
| SduI | GDGCHC | 4 cut(s) | 14, 308, 525, 924 |
| SexAI | ACCWGGT | 1 cut(s) | 141 |
| SfaNI | GCATC | 2 cut(s) | 1201, 1249 |
| Sfr274I | CTCGAG | 2 cut(s) | 881, 994 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1006 |
| SinI | GGWCC | 3 cut(s) | 154, 669, 804 |
| SlaI | CTCGAG | 2 cut(s) | 881, 994 |
| SmaI | CCCGGG | 1 cut(s) | 813 |
| SmlI | CTYRAG | 4 cut(s) | 47, 537, 881, 994 |
| SmoI | CTYRAG | 4 cut(s) | 47, 537, 881, 994 |
| Sse9I | AATT | 2 cut(s) | 226, 649 |
| SspMI | CTAG | 1 cut(s) | 869 |
| SstI | GAGCTC | 1 cut(s) | 924 |
| StyI | CCWWGG | 3 cut(s) | 57, 553, 857 |
| TaaI | ACNGT | 4 cut(s) | 85, 154, 914, 1141 |
| TaiI | ACGT | 5 cut(s) | 851, 906, 1052, 1197, 1227 |
| TasI | AATT | 2 cut(s) | 226, 649 |
| TfiI | GAWTC | 1 cut(s) | 498 |
| Tru1I | TTAA | 2 cut(s) | 320, 348 |
| Tru9I | TTAA | 2 cut(s) | 320, 348 |
| TseFI | GTSAC | 2 cut(s) | 760, 1195 |
| TseI | GCWGC | 7 cut(s) | 568, 655, 853, 1026, 1096, 1217, 1303 |
| Tsp45I | GTSAC | 2 cut(s) | 760, 1195 |
| TspGWI | ACGGA | 3 cut(s) | 37, 531, 1220 |
| TspMI | CCCGGG | 1 cut(s) | 811 |
| Tth111I | GACNNNGTC | 2 cut(s) | 902, 1051 |
| VpaK11BI | GGWCC | 3 cut(s) | 154, 669, 804 |
| XhoI | CTCGAG | 2 cut(s) | 881, 994 |
| XmaI | CCCGGG | 1 cut(s) | 811 |
| XmiI | GTMKAC | 1 cut(s) | 288 |
| XspI | CTAG | 1 cut(s) | 869 |
| ZraI | GACGTC | 1 cut(s) | 1050 |