Rh6AG043800

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0016745
Physical Location & Seq
Reverse (-)
6432133 .. 6433600
1468 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG043800.1

Sequence Viewer

Length: 1338 bp
ATGGATCCGTGCCCGTTCGTACGGATCCTCATCGGAGACTTGACCCTCAAGTTTCCCAGCGTCTCCAAACCCTCCTTCTCCACCGTCCACCCTTCCTCCTCTCCCTGCTTCTGCAAAATCAAGCTCACCAACTTCCCCCACCAGTTCTCCGCCGTCCCCCTCATCCTCGACGACTCCGCCTCCGCCTCTCAGACCACCACCACCACCACCTCCGCCGCCCGCTCCCACTCCCTCAACGCCTGCTTCAACCTCACCAAGCCCCAAATCGAAACCCTCGCCTCCAAGCGCCCCAGCCTCTCCATCTCGATCTACACCGGCCGCCGCGGCGCCACCTGCGGCCTCAACTCCGCCAAGCTCCTCGGCCGCGTCACCGTCCCGCTCGCCGAGCTCTCCACCGCCTTGTCCCGCCCCGTCGTGTACCAGAACGGCTGGATTGGAATCGGTGGCAAGAAGTCCGGGTCCGGATCCTCTCAGTCGCAGTTCTTTTTAAGCGTCCGGGCCGAACCCGACCCGAGATTCGTGTTCAAGTTCGACGGAGAACCCGAGTGTAGCCCCCAGGTTTTCCAGGTCCAGGGAAATGTAAAGCAGCCGGTCTTCACTTGCAAATTTGGGTTCAGAAACGCCTCCGATTTGCAGTCACGGTCAATGTCGGAGCCGGGTACCCCAAGGAATTGGTTAGTGCCGTTTATGGGAGGCAGCCAAAAGGAGCAGAGCGCGAAAGAGAGGAAAGGCTGGTCGCTGACGATCCACGACCTCTCCGGCTCGCCGGTCGCGGCGGCGTCGATGGTGACTCCCTTCGTCGCCTCCCCCGGCTCGCAGCGCGTGAGCCGGTCCAACCCCGGCGCGTGGCTGATTCTGAGACCGGAGGACGGCACGTGGAAACCGTGGGGCCGACTCGAGACGTGGCTGGAGCGCGGCGGCTCCGACACCGTCGGGTACAAGTTCGAGCTGCTCAGCACGATTCTGGCCAACTCCACCGTCAGCGCGTCGAACGGCGGGAAGTTCACGATCGACTTGACGTCGAGTTTGACGCCGGTGAACAGCCCGCACAGCAGCTTCGACTTCGGGTCCGGGTCGGGTTCGTCGAGGCCCGGGTCGGGGTCCGGGTCGGACTTCGGGTTCGGGTTGATACCTCAGCTGCTGCAGAGAGGGTTTGTGATGTCGTCGACGGTGGAGGGGATCGGGAAGTGTAGCAAGCCGGAGGTGGAGGTCGGAGTGCAGCACGTGACATGCACGGAGGACGCGGCCGCTTACGTGGCGTTGGCGGCGGCGATGGATCTGAGCATGGATGCTTGCCGGCCGTTTTCACATAAGCTCCGGAAGGAGCTGAGGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

445

Amino Acids

47.65

Weight (kDa)

9.3

Isoelectric Point (pI)

51.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 1 - 444 5.1e-187 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016745)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03010
malus_domestica MD05G1108400.v1.1
prunus_persica Prupe.8G152100_v2.0.a1
pyrus_communis pycom05g10440
rosa_chinensis RchiOBHm_Chr6g0247801
rosa_laevigata RLG00000015178
rosa_roxburghii Rroxscaffold_180G00433230 Rroxscaffold_7G00213640
rosa_rugosa Rorug05G0529000
rosa_samantha Rh6AG043800 Rh6BG038600 Rh6CG037300 Rh6DG034400
rosa_wichuraiana Rw6G003800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 341
AatII GACGTC 1 cut(s) 1022
Acc36I ACCTGC 1 cut(s) 341
Acc65I GGTACC 1 cut(s) 659
AccB1I GGYRCC 2 cut(s) 326, 659
AccBSI CCGCTC 2 cut(s) 222, 379
AccI GTMKAC 1 cut(s) 1166
AccII CGCG 9 cut(s) 324, 366, 716, 773, 822, 845, 915, 986, 1244
AccIII TCCGGA 2 cut(s) 461, 1317
AclWI GGATC 8 cut(s) 12, 19, 32, 459, 472, 739, 1187, 1284
AcoI YGGCCR 5 cut(s) 316, 361, 966, 1245, 1298
AcsI RAATTY 1 cut(s) 605
AcvI CACGTG 2 cut(s) 876, 1225
AcyI GRCGYC 4 cut(s) 327, 779, 1019, 1031
AfaI GTAC 4 cut(s) 21, 419, 661, 938
AfiI CCNNNNNNNGG 6 cut(s) 571, 689, 846, 869, 1097, 1098
AgsI TTSAA 2 cut(s) 247, 526
AhdI GACNNNNNGTC 2 cut(s) 1018, 1066
AjiI CACGTC 1 cut(s) 903
AjnI CCWGG 3 cut(s) 555, 564, 570
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AloI GAACNNNNNNTCC 2 cut(s) 1103, 1135
AluBI AGCT 8 cut(s) 124, 355, 388, 949, 1056, 1138, 1315, 1327
AluI AGCT 8 cut(s) 124, 355, 388, 949, 1056, 1138, 1315, 1327
Alw21I GWGCWC 1 cut(s) 390
Alw26I GTCTC 4 cut(s) 30, 67, 853, 893
AlwI GGATC 8 cut(s) 12, 19, 32, 459, 472, 739, 1187, 1284
AlwNI CAGNNNCTG 1 cut(s) 1141
Ama87I CYCGRG 4 cut(s) 511, 542, 896, 1091
Aor13HI TCCGGA 2 cut(s) 461, 1317
AoxI GGCC 9 cut(s) 316, 337, 361, 498, 889, 966, 1088, 1245, 1298
ApeKI GCWGC 8 cut(s) 586, 696, 817, 949, 1053, 1138, 1141, 1219
ApoI RAATTY 1 cut(s) 605
ArsI GACNNNNNNTTYG 6 cut(s) 500, 532, 1009, 1041, 1103, 1135
Asp718I GGTACC 1 cut(s) 659
AspLEI GCGC 7 cut(s) 288, 329, 716, 822, 845, 915, 986
AspS9I GGNCC 8 cut(s) 459, 498, 568, 831, 889, 1068, 1089, 1101
AsuC2I CCSGG 9 cut(s) 457, 497, 657, 810, 840, 1072, 1092, 1093, 1105
AsuHPI GGTGA 5 cut(s) 118, 244, 361, 799, 1048
AvaI CYCGRG 4 cut(s) 511, 542, 896, 1091
AvaII GGWCC 5 cut(s) 459, 568, 831, 1068, 1101
BaeGI GKGCMC 1 cut(s) 14
BalI TGGCCA 1 cut(s) 968
BamHI GGATCC 3 cut(s) 4, 24, 464
BanI GGYRCC 2 cut(s) 326, 659
BanII GRGCYC 1 cut(s) 390
BbrPI CACGTG 2 cut(s) 876, 1225
BbsI GAAGAC 1 cut(s) 586
Bbv12I GWGCWC 1 cut(s) 390
BbvCI CCTCAGC 2 cut(s) 1134, 1328
BbvI GCAGC 8 cut(s) 598, 708, 829, 936, 1065, 1125, 1128, 1231
BccI CCATC 3 cut(s) 308, 778, 1267
BceAI ACGGC 6 cut(s) 137, 442, 667, 886, 1009, 1285
BciT130I CCWGG 3 cut(s) 557, 566, 572
BcnI CCSGG 9 cut(s) 457, 497, 657, 810, 840, 1072, 1092, 1093, 1105
BcoDI GTCTC 4 cut(s) 30, 67, 853, 893
BfmI CTRYAG 1 cut(s) 1142
BfoI RGCGCY 2 cut(s) 289, 330
BfuAI ACCTGC 1 cut(s) 341
BglI GCCNNNNNGGC 1 cut(s) 324
BlpI GCTNAGC 1 cut(s) 953
Bme18I GGWCC 5 cut(s) 459, 568, 831, 1068, 1101
BmeRI GACNNNNNGTC 2 cut(s) 1018, 1066
BmeT110I CYCGRG 4 cut(s) 511, 542, 896, 1091
BmgBI CACGTC 1 cut(s) 903
BmgT120I GGNCC 8 cut(s) 459, 498, 568, 831, 889, 1068, 1089, 1101
BmsI GCATC 1 cut(s) 1279
BpiI GAAGAC 1 cut(s) 586
BpmI CTGGAG 1 cut(s) 929
Bpu10I CCTNAGC 2 cut(s) 1134, 1328
Bpu1102I GCTNAGC 1 cut(s) 953
BpuEI CTTGAG 1 cut(s) 32
BpuMI CCSGG 9 cut(s) 457, 497, 657, 810, 840, 1072, 1092, 1093, 1105
BsaAI YACGTR 3 cut(s) 876, 1225, 1255
BsaBI GATNNNNATC 2 cut(s) 29, 437
BsaHI GRCGYC 4 cut(s) 327, 779, 1019, 1031
BsaI GGTCTC 1 cut(s) 853
BsaJI CCNNGG 9 cut(s) 322, 358, 555, 571, 665, 808, 838, 884, 1091
BsaWI WCCGGW 3 cut(s) 461, 862, 1317
Bsc4I CCNNNNNNNGG 6 cut(s) 571, 689, 846, 869, 1097, 1098
Bse118I RCCGGY 6 cut(s) 314, 589, 766, 828, 1033, 1296
Bse1I ACTGG 1 cut(s) 142
Bse8I GATNNNNATC 2 cut(s) 29, 437
BseAI TCCGGA 2 cut(s) 461, 1317
BseBI CCWGG 3 cut(s) 557, 566, 572
BseDI CCNNGG 9 cut(s) 322, 358, 555, 571, 665, 808, 838, 884, 1091
BseGI GGATG 2 cut(s) 162, 1294
BseJI GATNNNNATC 2 cut(s) 29, 437
BseLI CCNNNNNNNGG 6 cut(s) 571, 689, 846, 869, 1097, 1098
BseMII CTCAG 7 cut(s) 203, 485, 848, 967, 1148, 1271, 1319
BseNI ACTGG 1 cut(s) 142
BseRI GAGGAG 2 cut(s) 88, 347
BseSI GKGCMC 1 cut(s) 14
BseX3I CGGCCG 4 cut(s) 316, 361, 1245, 1298
BseXI GCAGC 8 cut(s) 598, 708, 829, 936, 1065, 1125, 1128, 1231
BseYI CCCAGC 2 cut(s) 56, 290
BsgI GTGCAG 1 cut(s) 1238
Bsh1236I CGCG 9 cut(s) 324, 366, 716, 773, 822, 845, 915, 986, 1244
Bsh1285I CGRYCG 6 cut(s) 319, 364, 771, 1011, 1248, 1301
BshFI GGCC 9 cut(s) 318, 339, 363, 500, 891, 968, 1090, 1247, 1300
BshNI GGYRCC 2 cut(s) 326, 659
BsiEI CGRYCG 6 cut(s) 319, 364, 771, 1011, 1248, 1301
BsiHKAI GWGCWC 1 cut(s) 390
BsiHKCI CYCGRG 4 cut(s) 511, 542, 896, 1091
BsiWI CGTACG 1 cut(s) 19
BslFI GGGAC 3 cut(s) 140, 359, 388
BslI CCNNNNNNNGG 6 cut(s) 571, 689, 846, 869, 1097, 1098
BsmAI GTCTC 4 cut(s) 30, 67, 853, 893
BsmBI CGTCTC 2 cut(s) 67, 893
BsmFI GGGAC 3 cut(s) 140, 359, 388
BsnI GGCC 9 cut(s) 318, 339, 363, 500, 891, 968, 1090, 1247, 1300
Bso31I GGTCTC 1 cut(s) 853
BsoBI CYCGRG 4 cut(s) 511, 542, 896, 1091
Bsp1286I GDGCHC 2 cut(s) 14, 390
Bsp13I TCCGGA 2 cut(s) 461, 1317
Bsp143I GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
Bsp1720I GCTNAGC 1 cut(s) 953
BspANI GGCC 9 cut(s) 318, 339, 363, 500, 891, 968, 1090, 1247, 1300
BspCNI CTCAG 7 cut(s) 202, 484, 849, 966, 1147, 1272, 1320
BspEI TCCGGA 2 cut(s) 461, 1317
BspFNI CGCG 9 cut(s) 324, 366, 716, 773, 822, 845, 915, 986, 1244
BspMAI CTGCAG 1 cut(s) 1146
BspMI ACCTGC 1 cut(s) 341
BspPI GGATC 8 cut(s) 12, 19, 32, 459, 472, 739, 1187, 1284
BspT107I GGYRCC 2 cut(s) 326, 659
BspTNI GGTCTC 1 cut(s) 853
BsrBI CCGCTC 2 cut(s) 222, 379
BsrFI RCCGGY 6 cut(s) 314, 589, 766, 828, 1033, 1296
BsrI ACTGG 1 cut(s) 142
BssAI RCCGGY 6 cut(s) 314, 589, 766, 828, 1033, 1296
BssECI CCNNGG 9 cut(s) 322, 358, 555, 571, 665, 808, 838, 884, 1091
BssMI GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
BssNI GRCGYC 4 cut(s) 327, 779, 1019, 1031
BssT1I CCWWGG 1 cut(s) 665
Bst2UI CCWGG 3 cut(s) 557, 566, 572
Bst4CI ACNGT 7 cut(s) 85, 373, 642, 885, 931, 979, 1171
BstACI GRCGYC 4 cut(s) 327, 779, 1019, 1031
BstBAI YACGTR 3 cut(s) 876, 1225, 1255
BstC8I GCNNGC 9 cut(s) 220, 241, 381, 764, 815, 1046, 1196, 1294, 1298
BstDEI CTNAG 7 cut(s) 189, 471, 857, 953, 1134, 1280, 1328
BstDSI CCRYGG 2 cut(s) 322, 884
BstF5I GGATG 2 cut(s) 162, 1294
BstFNI CGCG 9 cut(s) 324, 366, 716, 773, 822, 845, 915, 986, 1244
BstH2I RGCGCY 2 cut(s) 289, 330
BstHHI GCGC 7 cut(s) 288, 329, 716, 822, 845, 915, 986
BstKTI GATC 8 cut(s) 7, 27, 309, 467, 747, 1011, 1182, 1279
BstMAI GTCTC 4 cut(s) 30, 67, 853, 893
BstMBI GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
BstMCI CGRYCG 6 cut(s) 319, 364, 771, 1011, 1248, 1301
BstMWI GCNNNNNNNGC 7 cut(s) 324, 333, 385, 819, 1050, 1256, 1265
BstNI CCWGG 3 cut(s) 557, 566, 572
BstNSI RCATGY 1 cut(s) 1233
BstSFI CTRYAG 1 cut(s) 1142
BstSLI GKGCMC 1 cut(s) 14
BstUI CGCG 9 cut(s) 324, 366, 716, 773, 822, 845, 915, 986, 1244
BstV1I GCAGC 8 cut(s) 598, 708, 829, 936, 1065, 1125, 1128, 1231
BstV2I GAAGAC 1 cut(s) 586
BstX2I RGATCY 4 cut(s) 4, 24, 464, 1276
BstXI CCANNNNNNTGG 1 cut(s) 672
BstYI RGATCY 4 cut(s) 4, 24, 464, 1276
BstZI CGGCCG 4 cut(s) 316, 361, 1245, 1298
BsuRI GGCC 9 cut(s) 318, 339, 363, 500, 891, 968, 1090, 1247, 1300
BtgI CCRYGG 2 cut(s) 322, 884
BtgZI GCGATG 1 cut(s) 1286
BtrI CACGTC 1 cut(s) 903
BtsCI GGATG 2 cut(s) 162, 1294
BveI ACCTGC 1 cut(s) 341
Cac8I GCNNGC 9 cut(s) 220, 241, 381, 764, 815, 1046, 1196, 1294, 1298
CaiI CAGNNNCTG 1 cut(s) 1141
CciNI GCGGCCGC 1 cut(s) 1245
CfoI GCGC 7 cut(s) 288, 329, 716, 822, 845, 915, 986
Cfr10I RCCGGY 6 cut(s) 314, 589, 766, 828, 1033, 1296
Cfr13I GGNCC 8 cut(s) 459, 498, 568, 831, 889, 1068, 1089, 1101
Cfr42I CCGCGG 1 cut(s) 325
Cfr9I CCCGGG 1 cut(s) 1091
CseI GACGC 7 cut(s) 49, 355, 481, 768, 975, 1039, 1250
Csp6I GTAC 4 cut(s) 20, 418, 660, 937
CviAII CATG 2 cut(s) 1230, 1285
CviQI GTAC 4 cut(s) 20, 418, 660, 937
DdeI CTNAG 7 cut(s) 189, 471, 857, 953, 1134, 1280, 1328
DinI GGCGCC 1 cut(s) 328
DpnI GATC 8 cut(s) 6, 26, 308, 466, 746, 1010, 1181, 1278
DpnII GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
DriI GACNNNNNGTC 2 cut(s) 1018, 1066
EaeI YGGCCR 5 cut(s) 316, 361, 966, 1245, 1298
EagI CGGCCG 4 cut(s) 316, 361, 1245, 1298
Eam1105I GACNNNNNGTC 2 cut(s) 1018, 1066
EciI GGCGGA 5 cut(s) 139, 166, 172, 202, 337
Ecl136II GAGCTC 1 cut(s) 388
EclXI CGGCCG 4 cut(s) 316, 361, 1245, 1298
Eco130I CCWWGG 1 cut(s) 665
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 1 cut(s) 853
Eco47I GGWCC 5 cut(s) 459, 568, 831, 1068, 1101
Eco52I CGGCCG 4 cut(s) 316, 361, 1245, 1298
Eco53kI GAGCTC 1 cut(s) 388
Eco72I CACGTG 2 cut(s) 876, 1225
Eco88I CYCGRG 4 cut(s) 511, 542, 896, 1091
EcoICRI GAGCTC 1 cut(s) 388
EcoRII CCWGG 3 cut(s) 555, 564, 570
EcoT14I CCWWGG 1 cut(s) 665
EcoT38I GRGCYC 1 cut(s) 390
EgeI GGCGCC 1 cut(s) 328
EheI GGCGCC 1 cut(s) 328
ErhI CCWWGG 1 cut(s) 665
Esp3I CGTCTC 2 cut(s) 67, 893
FaeI CATG 2 cut(s) 1233, 1288
FaiI YATR 4 cut(s) 689, 1231, 1286, 1311
FaqI GGGAC 3 cut(s) 140, 359, 388
FatI CATG 2 cut(s) 1229, 1284
FauI CCCGC 5 cut(s) 227, 384, 413, 989, 1053
FblI GTMKAC 1 cut(s) 1166
FokI GGATG 2 cut(s) 149, 1301
FriOI GRGCYC 1 cut(s) 390
GlaI GCGC 7 cut(s) 287, 328, 715, 821, 844, 914, 985
GsaI CCCAGC 2 cut(s) 60, 294
GsuI CTGGAG 1 cut(s) 929
HaeII RGCGCY 2 cut(s) 289, 330
HaeIII GGCC 9 cut(s) 318, 339, 363, 500, 891, 968, 1090, 1247, 1300
HgaI GACGC 7 cut(s) 49, 355, 481, 768, 975, 1039, 1250
HhaI GCGC 7 cut(s) 288, 329, 716, 822, 845, 915, 986
Hin1I GRCGYC 4 cut(s) 327, 779, 1019, 1031
Hin1II CATG 2 cut(s) 1233, 1288
Hin6I GCGC 7 cut(s) 286, 327, 714, 820, 843, 913, 984
HinP1I GCGC 7 cut(s) 286, 327, 714, 820, 843, 913, 984
HincII GTYRAC 1 cut(s) 1167
HindII GTYRAC 1 cut(s) 1167
HinfI GANTC 7 cut(s) 173, 438, 516, 790, 853, 894, 961
HphI GGTGA 5 cut(s) 118, 244, 361, 799, 1048
Hpy166II GTNNAC 5 cut(s) 88, 418, 1005, 1039, 1167
Hpy188III TCNNGA 6 cut(s) 304, 462, 898, 1006, 1183, 1318
Hpy8I GTNNAC 5 cut(s) 88, 418, 1005, 1039, 1167
HpyAV CCTTC 4 cut(s) 85, 102, 805, 1315
HpyCH4III ACNGT 7 cut(s) 85, 373, 642, 885, 931, 979, 1171
HpyCH4IV ACGT 5 cut(s) 875, 902, 1019, 1224, 1254
HpyCH4V TGCA 6 cut(s) 114, 603, 634, 1144, 1219, 1233
HpyF10VI GCNNNNNNNGC 7 cut(s) 324, 333, 385, 819, 1050, 1256, 1265
HpyF3I CTNAG 7 cut(s) 189, 471, 857, 953, 1134, 1280, 1328
HpySE526I ACGT 5 cut(s) 875, 902, 1019, 1224, 1254
Hsp92I GRCGYC 4 cut(s) 327, 779, 1019, 1031
Hsp92II CATG 2 cut(s) 1233, 1288
HspAI GCGC 7 cut(s) 286, 327, 714, 820, 843, 913, 984
KasI GGCGCC 1 cut(s) 326
Kpn2I TCCGGA 2 cut(s) 461, 1317
KpnI GGTACC 1 cut(s) 663
KroI GCCGGC 1 cut(s) 1296
KroNI GCCGGC 1 cut(s) 1298
KspI CCGCGG 1 cut(s) 325
Kzo9I GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
LmnI GCTCC 8 cut(s) 227, 360, 652, 706, 910, 926, 1320, 1324
Lsp1109I GCAGC 8 cut(s) 598, 708, 829, 936, 1065, 1125, 1128, 1231
LweI GCATC 1 cut(s) 1279
MaeII ACGT 5 cut(s) 875, 902, 1019, 1224, 1254
MaeIII GTNAC 4 cut(s) 367, 636, 787, 1225
MalI GATC 8 cut(s) 6, 26, 308, 466, 746, 1010, 1181, 1278
MbiI CCGCTC 2 cut(s) 222, 379
MboI GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
MboII GAAGA 1 cut(s) 586
MflI RGATCY 4 cut(s) 4, 24, 464, 1276
MhlI GDGCHC 2 cut(s) 14, 390
MlsI TGGCCA 1 cut(s) 968
MluCI AATT 2 cut(s) 605, 670
MluNI TGGCCA 1 cut(s) 968
Mly113I GGCGCC 1 cut(s) 327
MlyI GAGTC 3 cut(s) 167, 784, 888
MmeI TCCRAC 5 cut(s) 630, 858, 948, 1089, 1192
Mox20I TGGCCA 1 cut(s) 968
MroI TCCGGA 2 cut(s) 461, 1317
MroNI GCCGGC 1 cut(s) 1296
MscI TGGCCA 1 cut(s) 968
MseI TTAA 1 cut(s) 488
Msp20I TGGCCA 1 cut(s) 968
MspA1I CMGCKG 2 cut(s) 324, 1138
MvaI CCWGG 3 cut(s) 557, 566, 572
MvnI CGCG 9 cut(s) 324, 366, 716, 773, 822, 845, 915, 986, 1244
MwoI GCNNNNNNNGC 7 cut(s) 324, 333, 385, 819, 1050, 1256, 1265
NaeI GCCGGC 1 cut(s) 1298
NarI GGCGCC 1 cut(s) 327
NciI CCSGG 9 cut(s) 457, 497, 657, 810, 840, 1072, 1092, 1093, 1105
NdeII GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
NgoMIV GCCGGC 1 cut(s) 1296
NlaIII CATG 2 cut(s) 1233, 1288
NmeAIII GCCGAG 2 cut(s) 339, 409
NmuCI GTSAC 4 cut(s) 367, 636, 787, 1225
NotI GCGGCCGC 1 cut(s) 1245
NspI RCATGY 1 cut(s) 1233
PaeR7I CTCGAG 1 cut(s) 896
PaqCI CACCTGC 1 cut(s) 341
PcsI WCGNNNNNNNCGW 3 cut(s) 540, 881, 1082
PdiI GCCGGC 1 cut(s) 1298
PfeI GAWTC 4 cut(s) 438, 516, 853, 961
Pfl23II CGTACG 1 cut(s) 19
PflFI GACNNNGTC 1 cut(s) 929
Ple19I CGATCG 1 cut(s) 1011
PleI GAGTC 3 cut(s) 167, 784, 888
PluTI GGCGCC 1 cut(s) 330
PmaCI CACGTG 2 cut(s) 876, 1225
PmlI CACGTG 2 cut(s) 876, 1225
PpsI GAGTC 3 cut(s) 167, 784, 888
Ppu21I YACGTR 3 cut(s) 876, 1225, 1255
Psp124BI GAGCTC 1 cut(s) 390
Psp6I CCWGG 3 cut(s) 555, 564, 570
PspCI CACGTG 2 cut(s) 876, 1225
PspFI CCCAGC 2 cut(s) 56, 290
PspGI CCWGG 3 cut(s) 555, 564, 570
PspLI CGTACG 1 cut(s) 19
PspPI GGNCC 8 cut(s) 459, 498, 568, 831, 889, 1068, 1089, 1101
PstI CTGCAG 1 cut(s) 1146
PstNI CAGNNNCTG 1 cut(s) 1141
PsuI RGATCY 4 cut(s) 4, 24, 464, 1276
PsyI GACNNNGTC 1 cut(s) 929
PvuI CGATCG 1 cut(s) 1011
PvuII CAGCTG 1 cut(s) 1138
RsaI GTAC 4 cut(s) 21, 419, 661, 938
RsaNI GTAC 4 cut(s) 20, 418, 660, 937
SacI GAGCTC 1 cut(s) 390
SacII CCGCGG 1 cut(s) 325
SalI GTCGAC 1 cut(s) 1165
SaqAI TTAA 1 cut(s) 488
Sau3AI GATC 8 cut(s) 4, 24, 306, 464, 744, 1008, 1179, 1276
Sau96I GGNCC 8 cut(s) 459, 498, 568, 831, 889, 1068, 1089, 1101
SchI GAGTC 3 cut(s) 167, 784, 888
SduI GDGCHC 2 cut(s) 14, 390
SfaNI GCATC 1 cut(s) 1279
SfcI CTRYAG 1 cut(s) 1142
SfoI GGCGCC 1 cut(s) 328
Sfr274I CTCGAG 1 cut(s) 896
Sfr303I CCGCGG 1 cut(s) 325
SgrAI CRCCGGYG 1 cut(s) 1033
SgrBI CCGCGG 1 cut(s) 325
SgrDI CGTCGACG 1 cut(s) 1165
SinI GGWCC 5 cut(s) 459, 568, 831, 1068, 1101
SlaI CTCGAG 1 cut(s) 896
SmaI CCCGGG 1 cut(s) 1093
SmlI CTYRAG 2 cut(s) 47, 896
SmoI CTYRAG 2 cut(s) 47, 896
Sse9I AATT 2 cut(s) 605, 670
SspDI GGCGCC 1 cut(s) 326
SstI GAGCTC 1 cut(s) 390
StyI CCWWGG 1 cut(s) 665
TaaI ACNGT 7 cut(s) 85, 373, 642, 885, 931, 979, 1171
TaiI ACGT 5 cut(s) 878, 905, 1022, 1227, 1257
TasI AATT 2 cut(s) 605, 670
TfiI GAWTC 4 cut(s) 438, 516, 853, 961
Tru1I TTAA 1 cut(s) 488
Tru9I TTAA 1 cut(s) 488
TseFI GTSAC 4 cut(s) 367, 636, 787, 1225
TseI GCWGC 8 cut(s) 586, 696, 817, 949, 1053, 1138, 1141, 1219
Tsp45I GTSAC 4 cut(s) 367, 636, 787, 1225
TspGWI ACGGA 3 cut(s) 37, 549, 1250
TspMI CCCGGG 1 cut(s) 1091
Tth111I GACNNNGTC 1 cut(s) 929
VpaK11BI GGWCC 5 cut(s) 459, 568, 831, 1068, 1101
XapI RAATTY 1 cut(s) 605
XceI RCATGY 1 cut(s) 1233
XhoI CTCGAG 1 cut(s) 896
XmaI CCCGGG 1 cut(s) 1091
XmiI GTMKAC 1 cut(s) 1166
ZraI GACGTC 1 cut(s) 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.