Rh6DG034400

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0016745
Physical Location & Seq
Reverse (-)
3470399 .. 3473192
2794 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG034400.1

Sequence Viewer

Length: 1593 bp
ATGGTTTTCATACCAAGGTCGGCCGCACCTTATCCCCGCCCTTATATCCATAACACTCTAGCTGTCATTTTACAGCCTGTTTCCTCTTCATCATATAATCTCAAATCCTCATTCTCCTCTTTCAGTCTCCTCCTCCTTCTTCTTCTTCACTTTGCCGCTGTTAATATAAATTCCAACTCTCTCTTCTTCTTCTCTCTCCAAATCCCCAAATTCGAAAAACTCAAACCTCAAAACCCCAGAGCGACCCGGCCCGCTTCAATGGATCCGTGCCCGTTCGTACGGATCCTCATCGGAGACTTGACCCTCAAGTTTCCCAGCGTCTCCAAACCCTCCTTCTCCACCGTCCACCCTTCCTCCTCTCCCTGCTTCTGCAAAATCAAGCTCACCAACTTCCCCCACCAGTTCTCCGCCGTCCCTCTCATCCTCGACGACTCCGCCGCCGCTCCGACCACCACCGCCGCCGCCGCCCGCTCCCACTCCCTCAACGCCTGCTTCAACCTCACCAAGCCCCAAATCGAAACCCTCGCCTCCAAGCGCCCCAGCCTCTCCATCTCGATCTACACCGGCCGCCGCGGCGCCACCTGCGGCCTCAACTCCGCCAAGCTCCTCGGCCGCGTCACCGTCCCGCTCGCCGAGCTCGCCACGGCCGAGTCACGCCCCATGGTCTACCAGAACGGCTGGATTGGAATCGGTGGGAAGAAGTCCGGGTCCGGGTCCGGATCCTCTCAGTCGCAGTTCTTTTTAAGCGTCCGGGCCGAACCCGACCCGAGATTCGTGTTCAAGTTCGACGGAGAACCCGAGTGTAGCCCTCAAGTTTTTCAGGTCCAGGGAAATGTAAAGCAGCCGGTCTTCACTTGCAAGTTCGGGTTCAGAAACGCCTCCGATATGCAATCACGGTCAATGTCCGAGCCGAGCACACCGAGGAATTGGTTAGTGCCGTTTATGGGAAGCAACCAAAAGGAGCAGAGCTTGAAAGAGAGGAAAGGCTGGTCGTTGACGATCCACGACCTCTCCGGCTCGCCGGTCGCGGCGGCGTCTATGGTGACGCCGTTCGTCGCCTCCCCCGGCTCGCAGCGCGTGAGCCGGTCGAACCCCGGCGCGTGGCTGATTCTGAGACCGGAGGACGGCACATGGAAGCCGTGGGGCCGACTCGAGGCGTGGCTGGAGCGCGGCGGCTCCGACACCGTCGGGTACAAGTTCGAGCTGCTCAGCACGATTCTGGCGAACTCCACCGTCAGCGCGTCGAACGGCGGGAAGTTCACGATCGACTTGACGTCGAGTCTGACGCCGGTGAACAGCCCGCACAGTAGCTTTGACTTCGGGTCCGGGTCGGGTTCGTCGCGGCCCGGGTCGGGGTCCGGGTCGGACTTCGGGTTCGGGTTGATACCTCAGCTGCTGCAGAGAGGGTTTGTGATGTCGTCGACGGTGGAGGGGATCGGGAAGTGTAGCAAGCCGGAGGTGGAGGTCGGAGTGCAGCACGTGACATGCACGGAGGACGCGGCCGCTTACGTGGCTTTGGCGGCGGCGATGGATCTGAGCATGGATGCTTGCCGGCCGTTTTCACATAAGCTCCGGAAGGAGCTGAGGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

530

Amino Acids

57.2

Weight (kDa)

9.57

Isoelectric Point (pI)

50.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 87 - 529 2.8e-187 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016745)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03010
malus_domestica MD05G1108400.v1.1
prunus_persica Prupe.8G152100_v2.0.a1
pyrus_communis pycom05g10440
rosa_chinensis RchiOBHm_Chr6g0247801
rosa_laevigata RLG00000015178
rosa_roxburghii Rroxscaffold_180G00433230 Rroxscaffold_7G00213640
rosa_rugosa Rorug05G0529000
rosa_samantha Rh6AG043800 Rh6BG038600 Rh6CG037300 Rh6DG034400
rosa_wichuraiana Rw6G003800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 590
AatII GACGTC 1 cut(s) 1277
Acc36I ACCTGC 1 cut(s) 590
AccB1I GGYRCC 1 cut(s) 575
AccBSI CCGCTC 3 cut(s) 443, 471, 628
AccI GTMKAC 2 cut(s) 666, 1421
AccII CGCG 9 cut(s) 573, 615, 1028, 1077, 1100, 1170, 1241, 1342, 1499
AccIII TCCGGA 2 cut(s) 716, 1572
AclWI GGATC 9 cut(s) 257, 270, 277, 290, 714, 727, 994, 1442, 1539
AcoI YGGCCR 6 cut(s) 21, 565, 610, 645, 1500, 1553
AcsI RAATTY 2 cut(s) 169, 209
AcvI CACGTG 1 cut(s) 1480
AcyI GRCGYC 5 cut(s) 576, 1034, 1046, 1274, 1286
AfaI GTAC 2 cut(s) 279, 1193
AfiI CCNNNNNNNGG 7 cut(s) 711, 944, 1101, 1124, 1153, 1352, 1353
AgsI TTSAA 4 cut(s) 258, 496, 781, 973
AhdI GACNNNNNGTC 3 cut(s) 1273, 1278, 1321
AjnI CCWGG 1 cut(s) 825
AjuI GAANNNNNNNTTGG 4 cut(s) 167, 199, 317, 349
AloI GAACNNNNNNTCC 2 cut(s) 1358, 1390
Alw21I GWGCWC 2 cut(s) 639, 917
Alw26I GTCTC 4 cut(s) 131, 288, 325, 1108
AlwI GGATC 9 cut(s) 257, 270, 277, 290, 714, 727, 994, 1442, 1539
AlwNI CAGNNNCTG 1 cut(s) 1396
Ama87I CYCGRG 4 cut(s) 766, 797, 1151, 1346
Aor13HI TCCGGA 2 cut(s) 716, 1572
ApeKI GCWGC 6 cut(s) 841, 1072, 1204, 1393, 1396, 1474
ApoI RAATTY 2 cut(s) 169, 209
ArsI GACNNNNNNTTYG 4 cut(s) 755, 787, 1358, 1390
AspLEI GCGC 6 cut(s) 537, 578, 1077, 1100, 1170, 1241
AspS9I GGNCC 9 cut(s) 249, 708, 714, 753, 823, 1144, 1323, 1344, 1356
AsuHPI GGTGA 5 cut(s) 376, 493, 610, 1054, 1303
AsuII TTCGAA 1 cut(s) 213
AvaI CYCGRG 4 cut(s) 766, 797, 1151, 1346
AvaII GGWCC 5 cut(s) 708, 714, 823, 1323, 1356
BaeGI GKGCMC 1 cut(s) 272
BamHI GGATCC 3 cut(s) 262, 282, 719
BanI GGYRCC 1 cut(s) 575
BanII GRGCYC 1 cut(s) 639
BbrPI CACGTG 1 cut(s) 1480
BbsI GAAGAC 1 cut(s) 841
Bbv12I GWGCWC 2 cut(s) 639, 917
BbvCI CCTCAGC 2 cut(s) 1389, 1583
BbvI GCAGC 6 cut(s) 853, 1084, 1191, 1380, 1383, 1486
BccI CCATC 2 cut(s) 557, 1522
BceAI ACGGC 9 cut(s) 395, 660, 691, 922, 1033, 1123, 1141, 1264, 1540
BciT130I CCWGG 1 cut(s) 827
BcoDI GTCTC 4 cut(s) 131, 288, 325, 1108
BfaI CTAG 1 cut(s) 59
BfmI CTRYAG 1 cut(s) 1397
BfoI RGCGCY 2 cut(s) 538, 579
BfuAI ACCTGC 1 cut(s) 590
BglI GCCNNNNNGGC 1 cut(s) 573
BlpI GCTNAGC 1 cut(s) 1208
Bme18I GGWCC 5 cut(s) 708, 714, 823, 1323, 1356
BmeRI GACNNNNNGTC 3 cut(s) 1273, 1278, 1321
BmeT110I CYCGRG 4 cut(s) 766, 797, 1151, 1346
BmgT120I GGNCC 9 cut(s) 249, 708, 714, 753, 823, 1144, 1323, 1344, 1356
BmsI GCATC 1 cut(s) 1534
BpiI GAAGAC 1 cut(s) 841
BpmI CTGGAG 1 cut(s) 1184
Bpu10I CCTNAGC 2 cut(s) 1389, 1583
Bpu1102I GCTNAGC 1 cut(s) 1208
Bpu14I TTCGAA 1 cut(s) 213
BpuEI CTTGAG 2 cut(s) 290, 795
BsaAI YACGTR 2 cut(s) 1480, 1510
BsaBI GATNNNNATC 2 cut(s) 287, 686
BsaHI GRCGYC 5 cut(s) 576, 1034, 1046, 1274, 1286
BsaI GGTCTC 1 cut(s) 1108
BsaWI WCCGGW 3 cut(s) 716, 1117, 1572
BsaXI ACNNNNNCTCC 8 cut(s) 338, 368, 389, 419, 995, 1025, 1554, 1584
Bsc4I CCNNNNNNNGG 7 cut(s) 711, 944, 1101, 1124, 1153, 1352, 1353
Bse118I RCCGGY 6 cut(s) 563, 844, 1021, 1083, 1288, 1551
Bse1I ACTGG 1 cut(s) 400
Bse8I GATNNNNATC 2 cut(s) 287, 686
BseAI TCCGGA 2 cut(s) 716, 1572
BseBI CCWGG 1 cut(s) 827
BseGI GGATG 2 cut(s) 420, 1549
BseJI GATNNNNATC 2 cut(s) 287, 686
BseLI CCNNNNNNNGG 7 cut(s) 711, 944, 1101, 1124, 1153, 1352, 1353
BseMII CTCAG 6 cut(s) 740, 1103, 1222, 1403, 1526, 1574
BseNI ACTGG 1 cut(s) 400
BseRI GAGGAG 5 cut(s) 106, 119, 122, 346, 596
BseSI GKGCMC 1 cut(s) 272
BseX3I CGGCCG 6 cut(s) 21, 565, 610, 645, 1500, 1553
BseXI GCAGC 6 cut(s) 853, 1084, 1191, 1380, 1383, 1486
BseYI CCCAGC 2 cut(s) 314, 539
BsgI GTGCAG 1 cut(s) 1493
Bsh1236I CGCG 9 cut(s) 573, 615, 1028, 1077, 1100, 1170, 1241, 1342, 1499
Bsh1285I CGRYCG 9 cut(s) 24, 568, 613, 648, 1026, 1088, 1266, 1503, 1556
BshNI GGYRCC 1 cut(s) 575
BsiEI CGRYCG 9 cut(s) 24, 568, 613, 648, 1026, 1088, 1266, 1503, 1556
BsiHKAI GWGCWC 2 cut(s) 639, 917
BsiHKCI CYCGRG 4 cut(s) 766, 797, 1151, 1346
BsiWI CGTACG 1 cut(s) 277
BslFI GGGAC 2 cut(s) 398, 608
BslI CCNNNNNNNGG 7 cut(s) 711, 944, 1101, 1124, 1153, 1352, 1353
BsmAI GTCTC 4 cut(s) 131, 288, 325, 1108
BsmBI CGTCTC 1 cut(s) 325
BsmFI GGGAC 2 cut(s) 398, 608
Bso31I GGTCTC 1 cut(s) 1108
BsoBI CYCGRG 4 cut(s) 766, 797, 1151, 1346
Bsp119I TTCGAA 1 cut(s) 213
Bsp1286I GDGCHC 3 cut(s) 272, 639, 917
Bsp13I TCCGGA 2 cut(s) 716, 1572
Bsp143I GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
Bsp1720I GCTNAGC 1 cut(s) 1208
Bsp19I CCATGG 1 cut(s) 660
BspCNI CTCAG 6 cut(s) 739, 1104, 1221, 1402, 1527, 1575
BspEI TCCGGA 2 cut(s) 716, 1572
BspFNI CGCG 9 cut(s) 573, 615, 1028, 1077, 1100, 1170, 1241, 1342, 1499
BspMAI CTGCAG 1 cut(s) 1401
BspMI ACCTGC 1 cut(s) 590
BspPI GGATC 9 cut(s) 257, 270, 277, 290, 714, 727, 994, 1442, 1539
BspT104I TTCGAA 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 575
BspTNI GGTCTC 1 cut(s) 1108
BsrBI CCGCTC 3 cut(s) 443, 471, 628
BsrFI RCCGGY 6 cut(s) 563, 844, 1021, 1083, 1288, 1551
BsrI ACTGG 1 cut(s) 400
BssAI RCCGGY 6 cut(s) 563, 844, 1021, 1083, 1288, 1551
BssMI GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
BssNI GRCGYC 5 cut(s) 576, 1034, 1046, 1274, 1286
BssT1I CCWWGG 2 cut(s) 14, 660
Bst2UI CCWGG 1 cut(s) 827
Bst4CI ACNGT 7 cut(s) 343, 622, 897, 1186, 1234, 1307, 1426
Bst6I CTCTTC 2 cut(s) 91, 188
BstACI GRCGYC 5 cut(s) 576, 1034, 1046, 1274, 1286
BstBAI YACGTR 2 cut(s) 1480, 1510
BstBI TTCGAA 1 cut(s) 213
BstDEI CTNAG 6 cut(s) 726, 1112, 1208, 1389, 1535, 1583
BstDSI CCRYGG 4 cut(s) 571, 642, 660, 1139
BstF5I GGATG 2 cut(s) 420, 1549
BstFNI CGCG 9 cut(s) 573, 615, 1028, 1077, 1100, 1170, 1241, 1342, 1499
BstH2I RGCGCY 2 cut(s) 538, 579
BstHHI GCGC 6 cut(s) 537, 578, 1077, 1100, 1170, 1241
BstKTI GATC 8 cut(s) 265, 285, 558, 722, 1002, 1266, 1437, 1534
BstMAI GTCTC 4 cut(s) 131, 288, 325, 1108
BstMBI GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
BstMCI CGRYCG 9 cut(s) 24, 568, 613, 648, 1026, 1088, 1266, 1503, 1556
BstMWI GCNNNNNNNGC 8 cut(s) 464, 573, 582, 634, 638, 1074, 1511, 1520
BstNI CCWGG 1 cut(s) 827
BstNSI RCATGY 1 cut(s) 1488
BstSFI CTRYAG 1 cut(s) 1397
BstSLI GKGCMC 1 cut(s) 272
BstUI CGCG 9 cut(s) 573, 615, 1028, 1077, 1100, 1170, 1241, 1342, 1499
BstV1I GCAGC 6 cut(s) 853, 1084, 1191, 1380, 1383, 1486
BstV2I GAAGAC 1 cut(s) 841
BstX2I RGATCY 4 cut(s) 262, 282, 719, 1531
BstYI RGATCY 4 cut(s) 262, 282, 719, 1531
BstZI CGGCCG 6 cut(s) 21, 565, 610, 645, 1500, 1553
BtgI CCRYGG 4 cut(s) 571, 642, 660, 1139
BtgZI GCGATG 1 cut(s) 1541
BtsCI GGATG 2 cut(s) 420, 1549
BveI ACCTGC 1 cut(s) 590
CaiI CAGNNNCTG 1 cut(s) 1396
CciNI GCGGCCGC 1 cut(s) 1500
CfoI GCGC 6 cut(s) 537, 578, 1077, 1100, 1170, 1241
Cfr10I RCCGGY 6 cut(s) 563, 844, 1021, 1083, 1288, 1551
Cfr13I GGNCC 9 cut(s) 249, 708, 714, 753, 823, 1144, 1323, 1344, 1356
Cfr42I CCGCGG 1 cut(s) 574
Cfr9I CCCGGG 1 cut(s) 1346
CseI GACGC 8 cut(s) 307, 604, 736, 1023, 1054, 1230, 1294, 1505
Csp6I GTAC 2 cut(s) 278, 1192
CviAII CATG 4 cut(s) 661, 1131, 1485, 1540
CviQI GTAC 2 cut(s) 278, 1192
DdeI CTNAG 6 cut(s) 726, 1112, 1208, 1389, 1535, 1583
DinI GGCGCC 1 cut(s) 577
DpnI GATC 8 cut(s) 264, 284, 557, 721, 1001, 1265, 1436, 1533
DpnII GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
DriI GACNNNNNGTC 3 cut(s) 1273, 1278, 1321
EaeI YGGCCR 6 cut(s) 21, 565, 610, 645, 1500, 1553
EagI CGGCCG 6 cut(s) 21, 565, 610, 645, 1500, 1553
Eam1104I CTCTTC 2 cut(s) 91, 188
Eam1105I GACNNNNNGTC 3 cut(s) 1273, 1278, 1321
EarI CTCTTC 2 cut(s) 91, 188
EciI GGCGGA 3 cut(s) 397, 424, 586
Ecl136II GAGCTC 1 cut(s) 637
EclXI CGGCCG 6 cut(s) 21, 565, 610, 645, 1500, 1553
Eco130I CCWWGG 2 cut(s) 14, 660
Eco24I GRGCYC 1 cut(s) 639
Eco31I GGTCTC 1 cut(s) 1108
Eco47I GGWCC 5 cut(s) 708, 714, 823, 1323, 1356
Eco52I CGGCCG 6 cut(s) 21, 565, 610, 645, 1500, 1553
Eco53kI GAGCTC 1 cut(s) 637
Eco72I CACGTG 1 cut(s) 1480
Eco88I CYCGRG 4 cut(s) 766, 797, 1151, 1346
EcoICRI GAGCTC 1 cut(s) 637
EcoRII CCWGG 1 cut(s) 825
EcoT14I CCWWGG 2 cut(s) 14, 660
EcoT38I GRGCYC 1 cut(s) 639
EgeI GGCGCC 1 cut(s) 577
EheI GGCGCC 1 cut(s) 577
ErhI CCWWGG 2 cut(s) 14, 660
Esp3I CGTCTC 1 cut(s) 325
FaeI CATG 4 cut(s) 664, 1134, 1488, 1543
FaqI GGGAC 2 cut(s) 398, 608
FatI CATG 4 cut(s) 660, 1130, 1484, 1539
FauI CCCGC 6 cut(s) 44, 259, 476, 633, 1244, 1308
FblI GTMKAC 2 cut(s) 666, 1421
FokI GGATG 2 cut(s) 407, 1556
FriOI GRGCYC 1 cut(s) 639
FspBI CTAG 1 cut(s) 59
GlaI GCGC 6 cut(s) 536, 577, 1076, 1099, 1169, 1240
GsaI CCCAGC 2 cut(s) 318, 543
GsuI CTGGAG 1 cut(s) 1184
HaeII RGCGCY 2 cut(s) 538, 579
HgaI GACGC 8 cut(s) 307, 604, 736, 1023, 1054, 1230, 1294, 1505
HhaI GCGC 6 cut(s) 537, 578, 1077, 1100, 1170, 1241
Hin1I GRCGYC 5 cut(s) 576, 1034, 1046, 1274, 1286
Hin1II CATG 4 cut(s) 664, 1134, 1488, 1543
Hin6I GCGC 6 cut(s) 535, 576, 1075, 1098, 1168, 1239
HinP1I GCGC 6 cut(s) 535, 576, 1075, 1098, 1168, 1239
HincII GTYRAC 2 cut(s) 996, 1422
HindII GTYRAC 2 cut(s) 996, 1422
HinfI GANTC 8 cut(s) 431, 650, 687, 771, 1108, 1149, 1216, 1279
HphI GGTGA 5 cut(s) 376, 493, 610, 1054, 1303
Hpy166II GTNNAC 6 cut(s) 346, 667, 996, 1260, 1294, 1422
Hpy188III TCNNGA 5 cut(s) 553, 717, 1261, 1438, 1573
Hpy8I GTNNAC 6 cut(s) 346, 667, 996, 1260, 1294, 1422
Hpy99I CGWCG 9 cut(s) 431, 791, 1058, 1190, 1246, 1279, 1342, 1423, 1426
HpyAV CCTTC 4 cut(s) 146, 343, 360, 1570
HpyCH4III ACNGT 7 cut(s) 343, 622, 897, 1186, 1234, 1307, 1426
HpyCH4IV ACGT 3 cut(s) 1274, 1479, 1509
HpyCH4V TGCA 6 cut(s) 372, 858, 889, 1399, 1474, 1488
HpyF10VI GCNNNNNNNGC 8 cut(s) 464, 573, 582, 634, 638, 1074, 1511, 1520
HpyF3I CTNAG 6 cut(s) 726, 1112, 1208, 1389, 1535, 1583
HpySE526I ACGT 3 cut(s) 1274, 1479, 1509
Hsp92I GRCGYC 5 cut(s) 576, 1034, 1046, 1274, 1286
Hsp92II CATG 4 cut(s) 664, 1134, 1488, 1543
HspAI GCGC 6 cut(s) 535, 576, 1075, 1098, 1168, 1239
KasI GGCGCC 1 cut(s) 575
Kpn2I TCCGGA 2 cut(s) 716, 1572
KroI GCCGGC 1 cut(s) 1551
KroNI GCCGGC 1 cut(s) 1553
KspI CCGCGG 1 cut(s) 574
Kzo9I GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
LmnI GCTCC 8 cut(s) 448, 476, 609, 961, 1165, 1181, 1575, 1579
Lsp1109I GCAGC 6 cut(s) 853, 1084, 1191, 1380, 1383, 1486
LweI GCATC 1 cut(s) 1534
MaeI CTAG 1 cut(s) 59
MaeII ACGT 3 cut(s) 1274, 1479, 1509
MaeIII GTNAC 4 cut(s) 616, 651, 1042, 1480
MalI GATC 8 cut(s) 264, 284, 557, 721, 1001, 1265, 1436, 1533
MbiI CCGCTC 3 cut(s) 443, 471, 628
MboI GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
MboII GAAGA 9 cut(s) 78, 131, 134, 137, 175, 178, 181, 709, 841
MflI RGATCY 4 cut(s) 262, 282, 719, 1531
MhlI GDGCHC 3 cut(s) 272, 639, 917
MluCI AATT 3 cut(s) 169, 209, 925
Mly113I GGCGCC 1 cut(s) 576
MlyI GAGTC 4 cut(s) 425, 659, 1143, 1288
MmeI TCCRAC 5 cut(s) 198, 470, 1203, 1344, 1447
MroI TCCGGA 2 cut(s) 716, 1572
MroNI GCCGGC 1 cut(s) 1551
MseI TTAA 2 cut(s) 162, 743
MspA1I CMGCKG 3 cut(s) 158, 573, 1393
MvaI CCWGG 1 cut(s) 827
MvnI CGCG 9 cut(s) 573, 615, 1028, 1077, 1100, 1170, 1241, 1342, 1499
MwoI GCNNNNNNNGC 8 cut(s) 464, 573, 582, 634, 638, 1074, 1511, 1520
NaeI GCCGGC 1 cut(s) 1553
NarI GGCGCC 1 cut(s) 576
NcoI CCATGG 1 cut(s) 660
NdeII GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
NgoMIV GCCGGC 1 cut(s) 1551
NlaIII CATG 4 cut(s) 664, 1134, 1488, 1543
NmeAIII GCCGAG 4 cut(s) 588, 658, 673, 936
NmuCI GTSAC 4 cut(s) 616, 651, 1042, 1480
NotI GCGGCCGC 1 cut(s) 1500
NspI RCATGY 1 cut(s) 1488
NspV TTCGAA 1 cut(s) 213
PaeR7I CTCGAG 1 cut(s) 1151
PaqCI CACCTGC 1 cut(s) 590
PcsI WCGNNNNNNNCGW 3 cut(s) 645, 795, 1220
PdiI GCCGGC 1 cut(s) 1553
PfeI GAWTC 4 cut(s) 687, 771, 1108, 1216
Pfl23II CGTACG 1 cut(s) 277
PflFI GACNNNGTC 1 cut(s) 1184
Ple19I CGATCG 1 cut(s) 1266
PleI GAGTC 4 cut(s) 425, 658, 1143, 1287
PluTI GGCGCC 1 cut(s) 579
PmaCI CACGTG 1 cut(s) 1480
PmlI CACGTG 1 cut(s) 1480
PpsI GAGTC 4 cut(s) 425, 658, 1143, 1287
Ppu21I YACGTR 2 cut(s) 1480, 1510
Psp124BI GAGCTC 1 cut(s) 639
Psp6I CCWGG 1 cut(s) 825
PspCI CACGTG 1 cut(s) 1480
PspFI CCCAGC 2 cut(s) 314, 539
PspGI CCWGG 1 cut(s) 825
PspLI CGTACG 1 cut(s) 277
PspPI GGNCC 9 cut(s) 249, 708, 714, 753, 823, 1144, 1323, 1344, 1356
PspXI VCTCGAGB 1 cut(s) 1151
PstI CTGCAG 1 cut(s) 1401
PstNI CAGNNNCTG 1 cut(s) 1396
PsuI RGATCY 4 cut(s) 262, 282, 719, 1531
PsyI GACNNNGTC 1 cut(s) 1184
PvuI CGATCG 1 cut(s) 1266
PvuII CAGCTG 1 cut(s) 1393
RsaI GTAC 2 cut(s) 279, 1193
RsaNI GTAC 2 cut(s) 278, 1192
SacI GAGCTC 1 cut(s) 639
SacII CCGCGG 1 cut(s) 574
SalI GTCGAC 1 cut(s) 1420
SaqAI TTAA 2 cut(s) 162, 743
Sau3AI GATC 8 cut(s) 262, 282, 555, 719, 999, 1263, 1434, 1531
Sau96I GGNCC 9 cut(s) 249, 708, 714, 753, 823, 1144, 1323, 1344, 1356
SchI GAGTC 4 cut(s) 425, 659, 1143, 1288
SduI GDGCHC 3 cut(s) 272, 639, 917
SfaNI GCATC 1 cut(s) 1534
SfcI CTRYAG 1 cut(s) 1397
SfoI GGCGCC 1 cut(s) 577
Sfr274I CTCGAG 1 cut(s) 1151
Sfr303I CCGCGG 1 cut(s) 574
SfuI TTCGAA 1 cut(s) 213
SgrAI CRCCGGYG 1 cut(s) 1288
SgrBI CCGCGG 1 cut(s) 574
SgrDI CGTCGACG 1 cut(s) 1420
SinI GGWCC 5 cut(s) 708, 714, 823, 1323, 1356
SlaI CTCGAG 1 cut(s) 1151
SmaI CCCGGG 1 cut(s) 1348
SmlI CTYRAG 3 cut(s) 305, 810, 1151
SmoI CTYRAG 3 cut(s) 305, 810, 1151
Sse9I AATT 3 cut(s) 169, 209, 925
SspDI GGCGCC 1 cut(s) 575
SspMI CTAG 1 cut(s) 59
SstI GAGCTC 1 cut(s) 639
StyI CCWWGG 2 cut(s) 14, 660
TaaI ACNGT 7 cut(s) 343, 622, 897, 1186, 1234, 1307, 1426
TaiI ACGT 3 cut(s) 1277, 1482, 1512
TasI AATT 3 cut(s) 169, 209, 925
TfiI GAWTC 4 cut(s) 687, 771, 1108, 1216
Tru1I TTAA 2 cut(s) 162, 743
Tru9I TTAA 2 cut(s) 162, 743
TseFI GTSAC 4 cut(s) 616, 651, 1042, 1480
TseI GCWGC 6 cut(s) 841, 1072, 1204, 1393, 1396, 1474
Tsp45I GTSAC 4 cut(s) 616, 651, 1042, 1480
TspDTI ATGAA 1 cut(s) 78
TspGWI ACGGA 4 cut(s) 255, 295, 804, 1505
TspMI CCCGGG 1 cut(s) 1346
Tth111I GACNNNGTC 1 cut(s) 1184
VpaK11BI GGWCC 5 cut(s) 708, 714, 823, 1323, 1356
XapI RAATTY 2 cut(s) 169, 209
XceI RCATGY 1 cut(s) 1488
XhoI CTCGAG 1 cut(s) 1151
XmaI CCCGGG 1 cut(s) 1346
XmiI GTMKAC 2 cut(s) 666, 1421
XspI CTAG 1 cut(s) 59
ZraI GACGTC 1 cut(s) 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.