Rh6BG038600

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0016745
Physical Location & Seq
Reverse (-)
6309775 .. 6312232
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG038600.1

Sequence Viewer

Length: 1341 bp
ATGGACCCGTGCCCGTTCGTACGGATCCTCATCGGAGACTTGACCCTCAAGTTTCCCAGCGTCTCCAAACCCTCCTTCTCCACCGTCCACCCTTCCTCCTCTCCCTGCTTCTGCAAAATCAAGCTCACCAACTTCCCCCACCAGTTCTCCACCGTCCCCCTCATCCTCGACGACTCCGCCTCCGCCTCTCAGACCACCACCACCACCACCACCTCCGCCGCCCGCTCCCACTCCCTCAACGCCTGCTTCAACCTCACCAAGCCCCAAATCGAAACCCTCGCCTCCAAGCGCCCCAGCCTCTCCATCTCGATCTACACCGGCCGCCGCGGCGCCACCTGCGGCCTCAACTCCGCCAAGCTCCTCGGCCGCGTCACCGTCCCGCTCGCCGAGCTCTCCACCGCCGTGTCCCGCCCCGTCGTCTACCAGAACGGCTGGATTGGAATCGGTGGCAAGAAGTCCGGGTCCGGGTCCTCTCAGTCGCAGTTCTTTTTAAGCGTCCGGGCCGAACCCGACCCGAGATTCGTGTTCAAGTTCGACGGAGAACCCGAGTGTAGCCCCCAGGTTTTCCAGGTCCAGGGAAATGTAAAGCAGCCGGTCTTCACTTGCAAATTTGGGTTCAGAAACGTCTCCGATTTGCAATCACGGTCAATGTCGGAGCCGGGTACCCCAAGGAATTGGTTAGTGCCGTTTATGGGAGGCAGCCAAAAGGAGCAGAGCGCGAAAGAGAGGAAAGGCTGGTCGCTGACGATCCACGACCTCTCCGGCTCGCCGGTCGCGGCGGCGTCTATGGTGACTCCCTTCGTCGCCTCCCCCGGCTCGCAGCGCGTGAGCCGGTCCAACCCCGGCGCGTGGCTGATTCTGAGACCGGAGGACGGCACGTGGAAGCCGTGGGGCCGACTCGAGACGTGGCTGGAGCGCGGCGGCTCCGACACCGTCGGGTACAAGTTCGAGCTGCTCAGCACGATTCTGGCCAACTCCACCGTCAGCGCGTCGAACGGCGGGAAGTTCACGATCGACTTGACGTCGAGTTTGACGCCGGTGAACAGCCCGCACAGTAGCTTCGACTTCGGGTCCGGGTCGGGTTCGTCGCGGCCCGGGTCGGGGTCCGGGTCGGACTTCGGGTTCGGGTTGATACCTCAGCTGCTGCAGAGAGGGTTTGTGATGTCGTCGACGGTGGAGGGGATCGGGAAGTGTAGCAAGCCGGAGGTGGAGGTCGGAGTGCAGCACGTGACATGCACGGAGGACGCGGCCGCTTACGTGGCGTTGGCGGCGGCGATGGATCTGAGCATGGATGCTTGCCGGCCGTTTTCACATAAGCTCCGGAAGGAGCTGAGGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

446

Amino Acids

47.8

Weight (kDa)

9.3

Isoelectric Point (pI)

51.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 1 - 445 4.6e-187 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016745)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03010
malus_domestica MD05G1108400.v1.1
prunus_persica Prupe.8G152100_v2.0.a1
pyrus_communis pycom05g10440
rosa_chinensis RchiOBHm_Chr6g0247801
rosa_laevigata RLG00000015178
rosa_roxburghii Rroxscaffold_180G00433230 Rroxscaffold_7G00213640
rosa_rugosa Rorug05G0529000
rosa_samantha Rh6AG043800 Rh6BG038600 Rh6CG037300 Rh6DG034400
rosa_wichuraiana Rw6G003800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 344
AatII GACGTC 1 cut(s) 1025
Acc36I ACCTGC 1 cut(s) 344
Acc65I GGTACC 1 cut(s) 662
AccB1I GGYRCC 2 cut(s) 329, 662
AccBSI CCGCTC 2 cut(s) 225, 382
AccI GTMKAC 2 cut(s) 420, 1169
AccIII TCCGGA 1 cut(s) 1320
AclWI GGATC 5 cut(s) 19, 32, 742, 1190, 1287
AcoI YGGCCR 5 cut(s) 319, 364, 969, 1248, 1301
AcsI RAATTY 1 cut(s) 608
AcvI CACGTG 2 cut(s) 879, 1228
AcyI GRCGYC 4 cut(s) 330, 782, 1022, 1034
AfaI GTAC 3 cut(s) 21, 664, 941
AfiI CCNNNNNNNGG 7 cut(s) 465, 574, 692, 849, 872, 1100, 1101
AgsI TTSAA 2 cut(s) 250, 529
AhdI GACNNNNNGTC 2 cut(s) 1021, 1069
AjiI CACGTC 1 cut(s) 906
AjnI CCWGG 3 cut(s) 558, 567, 573
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AleI CACNNNNGTG 1 cut(s) 401
AloI GAACNNNNNNTCC 2 cut(s) 1106, 1138
AluBI AGCT 8 cut(s) 124, 358, 391, 952, 1059, 1141, 1318, 1330
AluI AGCT 8 cut(s) 124, 358, 391, 952, 1059, 1141, 1318, 1330
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 5 cut(s) 30, 67, 631, 856, 896
AlwI GGATC 5 cut(s) 19, 32, 742, 1190, 1287
AlwNI CAGNNNCTG 1 cut(s) 1144
Ama87I CYCGRG 4 cut(s) 514, 545, 899, 1094
Aor13HI TCCGGA 1 cut(s) 1320
AoxI GGCC 9 cut(s) 319, 340, 364, 501, 892, 969, 1091, 1248, 1301
ApeKI GCWGC 7 cut(s) 589, 699, 820, 952, 1141, 1144, 1222
ApoI RAATTY 1 cut(s) 608
ArsI GACNNNNNNTTYG 6 cut(s) 503, 535, 1012, 1044, 1106, 1138
Asp718I GGTACC 1 cut(s) 662
AspLEI GCGC 7 cut(s) 291, 332, 719, 825, 848, 918, 989
AsuHPI GGTGA 5 cut(s) 118, 247, 364, 802, 1051
AvaI CYCGRG 4 cut(s) 514, 545, 899, 1094
AvaII GGWCC 7 cut(s) 4, 462, 468, 571, 834, 1071, 1104
BaeGI GKGCMC 1 cut(s) 14
BalI TGGCCA 1 cut(s) 971
BamHI GGATCC 1 cut(s) 24
BanI GGYRCC 2 cut(s) 329, 662
BanII GRGCYC 1 cut(s) 393
BbrPI CACGTG 2 cut(s) 879, 1228
BbsI GAAGAC 1 cut(s) 589
Bbv12I GWGCWC 1 cut(s) 393
BbvCI CCTCAGC 2 cut(s) 1137, 1331
BbvI GCAGC 7 cut(s) 601, 711, 832, 939, 1128, 1131, 1234
BccI CCATC 2 cut(s) 311, 1270
BceAI ACGGC 7 cut(s) 386, 445, 670, 871, 889, 1012, 1288
BciT130I CCWGG 3 cut(s) 560, 569, 575
BcoDI GTCTC 5 cut(s) 30, 67, 631, 856, 896
BfmI CTRYAG 1 cut(s) 1145
BfoI RGCGCY 2 cut(s) 292, 333
BfuAI ACCTGC 1 cut(s) 344
BglI GCCNNNNNGGC 1 cut(s) 327
BlpI GCTNAGC 1 cut(s) 956
Bme18I GGWCC 7 cut(s) 4, 462, 468, 571, 834, 1071, 1104
BmeRI GACNNNNNGTC 2 cut(s) 1021, 1069
BmeT110I CYCGRG 4 cut(s) 514, 545, 899, 1094
BmgBI CACGTC 1 cut(s) 906
BmsI GCATC 1 cut(s) 1282
BpiI GAAGAC 1 cut(s) 589
BpmI CTGGAG 1 cut(s) 932
Bpu10I CCTNAGC 2 cut(s) 1137, 1331
Bpu1102I GCTNAGC 1 cut(s) 956
BpuEI CTTGAG 1 cut(s) 32
BsaAI YACGTR 3 cut(s) 879, 1228, 1258
BsaBI GATNNNNATC 2 cut(s) 29, 440
BsaHI GRCGYC 4 cut(s) 330, 782, 1022, 1034
BsaI GGTCTC 1 cut(s) 856
BsaJI CCNNGG 9 cut(s) 325, 361, 558, 574, 668, 811, 841, 887, 1094
BsaWI WCCGGW 2 cut(s) 865, 1320
Bsc4I CCNNNNNNNGG 7 cut(s) 465, 574, 692, 849, 872, 1100, 1101
Bse118I RCCGGY 6 cut(s) 317, 592, 769, 831, 1036, 1299
Bse1I ACTGG 1 cut(s) 142
Bse8I GATNNNNATC 2 cut(s) 29, 440
BseAI TCCGGA 1 cut(s) 1320
BseBI CCWGG 3 cut(s) 560, 569, 575
BseDI CCNNGG 9 cut(s) 325, 361, 558, 574, 668, 811, 841, 887, 1094
BseGI GGATG 2 cut(s) 162, 1297
BseJI GATNNNNATC 2 cut(s) 29, 440
BseLI CCNNNNNNNGG 7 cut(s) 465, 574, 692, 849, 872, 1100, 1101
BseMII CTCAG 7 cut(s) 203, 488, 851, 970, 1151, 1274, 1322
BseNI ACTGG 1 cut(s) 142
BseRI GAGGAG 2 cut(s) 88, 350
BseSI GKGCMC 1 cut(s) 14
BseX3I CGGCCG 4 cut(s) 319, 364, 1248, 1301
BseXI GCAGC 7 cut(s) 601, 711, 832, 939, 1128, 1131, 1234
BseYI CCCAGC 2 cut(s) 56, 293
BsgI GTGCAG 1 cut(s) 1241
Bsh1285I CGRYCG 6 cut(s) 322, 367, 774, 1014, 1251, 1304
BshFI GGCC 9 cut(s) 321, 342, 366, 503, 894, 971, 1093, 1250, 1303
BshNI GGYRCC 2 cut(s) 329, 662
BsiEI CGRYCG 6 cut(s) 322, 367, 774, 1014, 1251, 1304
BsiHKAI GWGCWC 1 cut(s) 393
BsiHKCI CYCGRG 4 cut(s) 514, 545, 899, 1094
BsiWI CGTACG 1 cut(s) 19
BslFI GGGAC 3 cut(s) 140, 362, 391
BslI CCNNNNNNNGG 7 cut(s) 465, 574, 692, 849, 872, 1100, 1101
BsmAI GTCTC 5 cut(s) 30, 67, 631, 856, 896
BsmBI CGTCTC 3 cut(s) 67, 631, 896
BsmFI GGGAC 3 cut(s) 140, 362, 391
BsnI GGCC 9 cut(s) 321, 342, 366, 503, 894, 971, 1093, 1250, 1303
Bso31I GGTCTC 1 cut(s) 856
BsoBI CYCGRG 4 cut(s) 514, 545, 899, 1094
Bsp1286I GDGCHC 2 cut(s) 14, 393
Bsp13I TCCGGA 1 cut(s) 1320
Bsp143I GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
Bsp1720I GCTNAGC 1 cut(s) 956
BspANI GGCC 9 cut(s) 321, 342, 366, 503, 894, 971, 1093, 1250, 1303
BspCNI CTCAG 7 cut(s) 202, 487, 852, 969, 1150, 1275, 1323
BspEI TCCGGA 1 cut(s) 1320
BspMAI CTGCAG 1 cut(s) 1149
BspMI ACCTGC 1 cut(s) 344
BspPI GGATC 5 cut(s) 19, 32, 742, 1190, 1287
BspT107I GGYRCC 2 cut(s) 329, 662
BspTNI GGTCTC 1 cut(s) 856
BsrBI CCGCTC 2 cut(s) 225, 382
BsrFI RCCGGY 6 cut(s) 317, 592, 769, 831, 1036, 1299
BsrI ACTGG 1 cut(s) 142
BssAI RCCGGY 6 cut(s) 317, 592, 769, 831, 1036, 1299
BssECI CCNNGG 9 cut(s) 325, 361, 558, 574, 668, 811, 841, 887, 1094
BssMI GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
BssNI GRCGYC 4 cut(s) 330, 782, 1022, 1034
BssT1I CCWWGG 1 cut(s) 668
Bst2UI CCWGG 3 cut(s) 560, 569, 575
Bst4CI ACNGT 8 cut(s) 85, 154, 376, 645, 934, 982, 1055, 1174
BstACI GRCGYC 4 cut(s) 330, 782, 1022, 1034
BstBAI YACGTR 3 cut(s) 879, 1228, 1258
BstC8I GCNNGC 9 cut(s) 223, 244, 384, 767, 818, 1049, 1199, 1297, 1301
BstDEI CTNAG 7 cut(s) 189, 474, 860, 956, 1137, 1283, 1331
BstDSI CCRYGG 2 cut(s) 325, 887
BstF5I GGATG 2 cut(s) 162, 1297
BstH2I RGCGCY 2 cut(s) 292, 333
BstHHI GCGC 7 cut(s) 291, 332, 719, 825, 848, 918, 989
BstKTI GATC 6 cut(s) 27, 312, 750, 1014, 1185, 1282
BstMAI GTCTC 5 cut(s) 30, 67, 631, 856, 896
BstMBI GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
BstMCI CGRYCG 6 cut(s) 322, 367, 774, 1014, 1251, 1304
BstMWI GCNNNNNNNGC 6 cut(s) 327, 336, 388, 822, 1259, 1268
BstNI CCWGG 3 cut(s) 560, 569, 575
BstNSI RCATGY 1 cut(s) 1236
BstSFI CTRYAG 1 cut(s) 1145
BstSLI GKGCMC 1 cut(s) 14
BstV1I GCAGC 7 cut(s) 601, 711, 832, 939, 1128, 1131, 1234
BstV2I GAAGAC 1 cut(s) 589
BstX2I RGATCY 2 cut(s) 24, 1279
BstXI CCANNNNNNTGG 1 cut(s) 675
BstYI RGATCY 2 cut(s) 24, 1279
BstZI CGGCCG 4 cut(s) 319, 364, 1248, 1301
BsuRI GGCC 9 cut(s) 321, 342, 366, 503, 894, 971, 1093, 1250, 1303
BtgI CCRYGG 2 cut(s) 325, 887
BtgZI GCGATG 1 cut(s) 1289
BtrI CACGTC 1 cut(s) 906
BtsCI GGATG 2 cut(s) 162, 1297
BveI ACCTGC 1 cut(s) 344
Cac8I GCNNGC 9 cut(s) 223, 244, 384, 767, 818, 1049, 1199, 1297, 1301
CaiI CAGNNNCTG 1 cut(s) 1144
CciNI GCGGCCGC 1 cut(s) 1248
CfoI GCGC 7 cut(s) 291, 332, 719, 825, 848, 918, 989
Cfr10I RCCGGY 6 cut(s) 317, 592, 769, 831, 1036, 1299
Cfr42I CCGCGG 1 cut(s) 328
Cfr9I CCCGGG 1 cut(s) 1094
CseI GACGC 7 cut(s) 49, 358, 484, 771, 978, 1042, 1253
Csp6I GTAC 3 cut(s) 20, 663, 940
CviAII CATG 2 cut(s) 1233, 1288
CviQI GTAC 3 cut(s) 20, 663, 940
DdeI CTNAG 7 cut(s) 189, 474, 860, 956, 1137, 1283, 1331
DinI GGCGCC 1 cut(s) 331
DpnI GATC 6 cut(s) 26, 311, 749, 1013, 1184, 1281
DpnII GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
DriI GACNNNNNGTC 2 cut(s) 1021, 1069
EaeI YGGCCR 5 cut(s) 319, 364, 969, 1248, 1301
EagI CGGCCG 4 cut(s) 319, 364, 1248, 1301
Eam1105I GACNNNNNGTC 2 cut(s) 1021, 1069
EciI GGCGGA 4 cut(s) 166, 172, 205, 340
Ecl136II GAGCTC 1 cut(s) 391
EclXI CGGCCG 4 cut(s) 319, 364, 1248, 1301
Eco130I CCWWGG 1 cut(s) 668
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 1 cut(s) 856
Eco47I GGWCC 7 cut(s) 4, 462, 468, 571, 834, 1071, 1104
Eco52I CGGCCG 4 cut(s) 319, 364, 1248, 1301
Eco53kI GAGCTC 1 cut(s) 391
Eco72I CACGTG 2 cut(s) 879, 1228
Eco88I CYCGRG 4 cut(s) 514, 545, 899, 1094
EcoICRI GAGCTC 1 cut(s) 391
EcoO109I RGGNCCY 1 cut(s) 468
EcoRII CCWGG 3 cut(s) 558, 567, 573
EcoT14I CCWWGG 1 cut(s) 668
EcoT38I GRGCYC 1 cut(s) 393
EgeI GGCGCC 1 cut(s) 331
EheI GGCGCC 1 cut(s) 331
ErhI CCWWGG 1 cut(s) 668
Esp3I CGTCTC 3 cut(s) 67, 631, 896
FaeI CATG 2 cut(s) 1236, 1291
FaiI YATR 5 cut(s) 692, 788, 1234, 1289, 1314
FaqI GGGAC 3 cut(s) 140, 362, 391
FatI CATG 2 cut(s) 1232, 1287
FauI CCCGC 5 cut(s) 230, 387, 416, 992, 1056
FblI GTMKAC 2 cut(s) 420, 1169
FokI GGATG 2 cut(s) 149, 1304
FriOI GRGCYC 1 cut(s) 393
GlaI GCGC 7 cut(s) 290, 331, 718, 824, 847, 917, 988
GsaI CCCAGC 2 cut(s) 60, 297
GsuI CTGGAG 1 cut(s) 932
HaeII RGCGCY 2 cut(s) 292, 333
HaeIII GGCC 9 cut(s) 321, 342, 366, 503, 894, 971, 1093, 1250, 1303
HgaI GACGC 7 cut(s) 49, 358, 484, 771, 978, 1042, 1253
HhaI GCGC 7 cut(s) 291, 332, 719, 825, 848, 918, 989
Hin1I GRCGYC 4 cut(s) 330, 782, 1022, 1034
Hin1II CATG 2 cut(s) 1236, 1291
Hin6I GCGC 7 cut(s) 289, 330, 717, 823, 846, 916, 987
HinP1I GCGC 7 cut(s) 289, 330, 717, 823, 846, 916, 987
HincII GTYRAC 1 cut(s) 1170
HindII GTYRAC 1 cut(s) 1170
HinfI GANTC 7 cut(s) 173, 441, 519, 793, 856, 897, 964
HphI GGTGA 5 cut(s) 118, 247, 364, 802, 1051
Hpy166II GTNNAC 5 cut(s) 88, 421, 1008, 1042, 1170
Hpy188III TCNNGA 5 cut(s) 307, 901, 1009, 1186, 1321
Hpy8I GTNNAC 5 cut(s) 88, 421, 1008, 1042, 1170
HpyAV CCTTC 4 cut(s) 85, 102, 808, 1318
HpyCH4III ACNGT 8 cut(s) 85, 154, 376, 645, 934, 982, 1055, 1174
HpyCH4IV ACGT 6 cut(s) 624, 878, 905, 1022, 1227, 1257
HpyCH4V TGCA 6 cut(s) 114, 606, 637, 1147, 1222, 1236
HpyF10VI GCNNNNNNNGC 6 cut(s) 327, 336, 388, 822, 1259, 1268
HpyF3I CTNAG 7 cut(s) 189, 474, 860, 956, 1137, 1283, 1331
HpySE526I ACGT 6 cut(s) 624, 878, 905, 1022, 1227, 1257
Hsp92I GRCGYC 4 cut(s) 330, 782, 1022, 1034
Hsp92II CATG 2 cut(s) 1236, 1291
HspAI GCGC 7 cut(s) 289, 330, 717, 823, 846, 916, 987
KasI GGCGCC 1 cut(s) 329
Kpn2I TCCGGA 1 cut(s) 1320
KpnI GGTACC 1 cut(s) 666
KroI GCCGGC 1 cut(s) 1299
KroNI GCCGGC 1 cut(s) 1301
KspI CCGCGG 1 cut(s) 328
Kzo9I GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
LmnI GCTCC 8 cut(s) 230, 363, 655, 709, 913, 929, 1323, 1327
Lsp1109I GCAGC 7 cut(s) 601, 711, 832, 939, 1128, 1131, 1234
LweI GCATC 1 cut(s) 1282
MaeII ACGT 6 cut(s) 624, 878, 905, 1022, 1227, 1257
MaeIII GTNAC 3 cut(s) 370, 790, 1228
MalI GATC 6 cut(s) 26, 311, 749, 1013, 1184, 1281
MbiI CCGCTC 2 cut(s) 225, 382
MboI GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
MboII GAAGA 1 cut(s) 589
MflI RGATCY 2 cut(s) 24, 1279
MhlI GDGCHC 2 cut(s) 14, 393
MlsI TGGCCA 1 cut(s) 971
MluCI AATT 2 cut(s) 608, 673
MluNI TGGCCA 1 cut(s) 971
Mly113I GGCGCC 1 cut(s) 330
MlyI GAGTC 3 cut(s) 167, 787, 891
MmeI TCCRAC 5 cut(s) 633, 861, 951, 1092, 1195
Mox20I TGGCCA 1 cut(s) 971
MroI TCCGGA 1 cut(s) 1320
MroNI GCCGGC 1 cut(s) 1299
MscI TGGCCA 1 cut(s) 971
MseI TTAA 1 cut(s) 491
MslI CAYNNNNRTG 1 cut(s) 401
Msp20I TGGCCA 1 cut(s) 971
MspA1I CMGCKG 2 cut(s) 327, 1141
MvaI CCWGG 3 cut(s) 560, 569, 575
MwoI GCNNNNNNNGC 6 cut(s) 327, 336, 388, 822, 1259, 1268
NaeI GCCGGC 1 cut(s) 1301
NarI GGCGCC 1 cut(s) 330
NdeII GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
NgoMIV GCCGGC 1 cut(s) 1299
NlaIII CATG 2 cut(s) 1236, 1291
NmeAIII GCCGAG 2 cut(s) 342, 412
NmuCI GTSAC 3 cut(s) 370, 790, 1228
NotI GCGGCCGC 1 cut(s) 1248
NspI RCATGY 1 cut(s) 1236
OliI CACNNNNGTG 1 cut(s) 401
PaeR7I CTCGAG 1 cut(s) 899
PaqCI CACCTGC 1 cut(s) 344
PcsI WCGNNNNNNNCGW 2 cut(s) 543, 884
PdiI GCCGGC 1 cut(s) 1301
PfeI GAWTC 4 cut(s) 441, 519, 856, 964
Pfl23II CGTACG 1 cut(s) 19
PflFI GACNNNGTC 1 cut(s) 932
Ple19I CGATCG 1 cut(s) 1014
PleI GAGTC 3 cut(s) 167, 787, 891
PluTI GGCGCC 1 cut(s) 333
PmaCI CACGTG 2 cut(s) 879, 1228
PmlI CACGTG 2 cut(s) 879, 1228
PpsI GAGTC 3 cut(s) 167, 787, 891
Ppu21I YACGTR 3 cut(s) 879, 1228, 1258
PpuMI RGGWCCY 1 cut(s) 468
Psp124BI GAGCTC 1 cut(s) 393
Psp5II RGGWCCY 1 cut(s) 468
Psp6I CCWGG 3 cut(s) 558, 567, 573
PspCI CACGTG 2 cut(s) 879, 1228
PspFI CCCAGC 2 cut(s) 56, 293
PspGI CCWGG 3 cut(s) 558, 567, 573
PspLI CGTACG 1 cut(s) 19
PspPPI RGGWCCY 1 cut(s) 468
PstI CTGCAG 1 cut(s) 1149
PstNI CAGNNNCTG 1 cut(s) 1144
PsuI RGATCY 2 cut(s) 24, 1279
PsyI GACNNNGTC 1 cut(s) 932
PvuI CGATCG 1 cut(s) 1014
PvuII CAGCTG 1 cut(s) 1141
RsaI GTAC 3 cut(s) 21, 664, 941
RsaNI GTAC 3 cut(s) 20, 663, 940
RseI CAYNNNNRTG 1 cut(s) 401
SacI GAGCTC 1 cut(s) 393
SacII CCGCGG 1 cut(s) 328
SalI GTCGAC 1 cut(s) 1168
SaqAI TTAA 1 cut(s) 491
Sau3AI GATC 6 cut(s) 24, 309, 747, 1011, 1182, 1279
SchI GAGTC 3 cut(s) 167, 787, 891
SduI GDGCHC 2 cut(s) 14, 393
SfaNI GCATC 1 cut(s) 1282
SfcI CTRYAG 1 cut(s) 1145
SfoI GGCGCC 1 cut(s) 331
Sfr274I CTCGAG 1 cut(s) 899
Sfr303I CCGCGG 1 cut(s) 328
SgrAI CRCCGGYG 1 cut(s) 1036
SgrBI CCGCGG 1 cut(s) 328
SgrDI CGTCGACG 1 cut(s) 1168
SinI GGWCC 7 cut(s) 4, 462, 468, 571, 834, 1071, 1104
SlaI CTCGAG 1 cut(s) 899
SmaI CCCGGG 1 cut(s) 1096
SmiMI CAYNNNNRTG 1 cut(s) 401
SmlI CTYRAG 2 cut(s) 47, 899
SmoI CTYRAG 2 cut(s) 47, 899
Sse9I AATT 2 cut(s) 608, 673
SspDI GGCGCC 1 cut(s) 329
SstI GAGCTC 1 cut(s) 393
StyI CCWWGG 1 cut(s) 668
TaaI ACNGT 8 cut(s) 85, 154, 376, 645, 934, 982, 1055, 1174
TaiI ACGT 6 cut(s) 627, 881, 908, 1025, 1230, 1260
TasI AATT 2 cut(s) 608, 673
TfiI GAWTC 4 cut(s) 441, 519, 856, 964
Tru1I TTAA 1 cut(s) 491
Tru9I TTAA 1 cut(s) 491
TseFI GTSAC 3 cut(s) 370, 790, 1228
TseI GCWGC 7 cut(s) 589, 699, 820, 952, 1141, 1144, 1222
Tsp45I GTSAC 3 cut(s) 370, 790, 1228
TspGWI ACGGA 3 cut(s) 37, 552, 1253
TspMI CCCGGG 1 cut(s) 1094
Tth111I GACNNNGTC 1 cut(s) 932
VpaK11BI GGWCC 7 cut(s) 4, 462, 468, 571, 834, 1071, 1104
XapI RAATTY 1 cut(s) 608
XceI RCATGY 1 cut(s) 1236
XhoI CTCGAG 1 cut(s) 899
XmaI CCCGGG 1 cut(s) 1094
XmiI GTMKAC 2 cut(s) 420, 1169
ZraI GACGTC 1 cut(s) 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.