MD05G1195500.v1.1

Belongs to the SIS family. GutQ KpsF subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
32294015 .. 32295611
1597 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1195500.v1.1.491

Sequence Viewer

Length: 1089 bp
ATGGGTTCTCTGCCTCCTTTTTCCTCAGGCGTCATCCATCCGCATTCTCCTCCCAATACCAAAACCACCACCACCACAACAACCACCCAATTTTCCTCCGCCTCCTCCTGCATTGACGAAACTACCCTCCTAAATCTTTTCAAATCCCAACAGAGCCACCTCAACTTCTTCTTCCAGCACCTGGACCTGCCCCAGACACTGGCCTTCACCCGCACCCTCCTCCTCCAATCCTCCGCCGGCGCCACTATATTTTTCTCCGGCGTCGGCAAGTCCGGCTTCGTCGCCCACAAGATCTCCCAGACCCTCGTCTCCCTCGGCATCCGCTCCGGCTTTCTCTCCCCTCTCGACGCCCTCCACGGCGACATCGGCGCCCTCTCCAAAACCGACGTTTTGGTCCTCTTCAGCAAGTCCGGCACCACCGAGGAGCTCCTCCGCCTCGTCCCCTGCGCCAAGGCCAAAGGCGCCTTCCTCATCTCCGTCACCTCCGTTGACGGCAATGCCCTTGCCTCCCTCTGCGACATGAACGTGCATTTGCCAGTGGAGCGAGAACTCTGCCCCTTCGATTTGGCTCCGGTCACCTCCACCGCCATCCAAATGGTCTTCGGCGACACCGTCGCGATCGCGCTCATGGGCGCCAAAAGTCTCACCAAAGAACAATACGCCGCCAATCACCCCGCCGGCAGGATCGGCAAATCCCTTATCTTCAAGGTCAAAGATGTAATGAAGAAGGAAGACGAGCTTCCGGTGTGCAAGGAAGGGGACCTGATAATGGAGCAGCTGGTGGAGCTGACGAGCAAGGGATGCGGTTGCCTGCTTGTGATCGACGCCGAGCACCGCCTGATCGGCACGTTCACCGACGGAGATCTGCGGCGGACTCTCAAGGCCAGTGGGGAAGCAATCTTCAAGCTCACGGTTGGGGAAGTGTGCAACAGACACCCCAGAACAATTGGTCCCGACGCCATGGCGGTTGACGCCATGCAGAAGATGGAAGCACCACCGTCGCCGGTTCAGTTCTTGCCGGTCATCAATGATCAGAATCAAGTGATTGGGATCGTCACTTTACATGGATTGGTTTCAGCTGGCCTCTGA

Protein Analysis

363

Amino Acids

38.63

Weight (kDa)

6.41

Isoelectric Point (pI)

32.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SIS PF01380 82 - 207 9.6e-18 SIS domain
CBS PF00571 305 - 360 2.7e-08 CBS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012365)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 392
Acc36I ACCTGC 1 cut(s) 195
AccB1I GGYRCC 5 cut(s) 239, 368, 413, 461, 632
AccB7I CCANNNNNTGG 2 cut(s) 181, 199
AccBSI CCGCTC 1 cut(s) 324
AccII CGCG 2 cut(s) 617, 623
AclWI GGATC 2 cut(s) 692, 1058
AcuI CTGAAG 1 cut(s) 385
AfiI CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
AgsI TTSAA 3 cut(s) 142, 706, 904
AjnI CCWGG 1 cut(s) 180
AjuI GAANNNNNNNTTGG 2 cut(s) 449, 481
AloI GAACNNNNNNTCC 2 cut(s) 934, 966
AluBI AGCT 6 cut(s) 427, 739, 778, 787, 907, 1079
AluI AGCT 6 cut(s) 427, 739, 778, 787, 907, 1079
Alw21I GWGCWC 2 cut(s) 429, 834
Alw26I GTCTC 2 cut(s) 313, 647
AlwI GGATC 2 cut(s) 692, 1058
AlwNI CAGNNNCTG 2 cut(s) 181, 199
AoxI GGCC 4 cut(s) 201, 453, 882, 1081
ApeKI GCWGC 1 cut(s) 775
AsiSI GCGATCGC 1 cut(s) 621
AspLEI GCGC 6 cut(s) 242, 371, 449, 464, 625, 635
AspS9I GGNCC 4 cut(s) 184, 394, 760, 950
AsuHPI GGTGA 6 cut(s) 199, 472, 568, 637, 662, 844
AvaII GGWCC 4 cut(s) 184, 394, 760, 950
AxyI CCTNAGG 1 cut(s) 25
BanI GGYRCC 5 cut(s) 239, 368, 413, 461, 632
BanII GRGCYC 1 cut(s) 429
BbsI GAAGAC 2 cut(s) 592, 738
Bbv12I GWGCWC 2 cut(s) 429, 834
BbvI GCAGC 1 cut(s) 787
BccI CCATC 3 cut(s) 45, 596, 979
BceAI ACGGC 2 cut(s) 373, 508
BcgI CGANNNNNNTGC 4 cut(s) 534, 568, 981, 1015
BciT130I CCWGG 1 cut(s) 182
BclI TGATCA 1 cut(s) 1030
BcoDI GTCTC 2 cut(s) 313, 647
BfoI RGCGCY 4 cut(s) 243, 372, 465, 636
BfuAI ACCTGC 1 cut(s) 195
BglI GCCNNNNNGGC 1 cut(s) 843
BglII AGATCT 2 cut(s) 291, 862
BisI GCNGC 3 cut(s) 663, 776, 869
BlsI GCNGC 3 cut(s) 664, 777, 870
Bme1390I CCNGG 1 cut(s) 182
Bme18I GGWCC 4 cut(s) 184, 394, 760, 950
BmgT120I GGNCC 4 cut(s) 184, 394, 760, 950
BmiI GGNNCC 8 cut(s) 241, 370, 415, 463, 570, 634, 761, 952
BmrFI CCNGG 1 cut(s) 182
BmsI GCATC 2 cut(s) 327, 791
BoxI GACNNNNGTC 1 cut(s) 305
BpiI GAAGAC 2 cut(s) 592, 738
BpuEI CTTGAG 1 cut(s) 863
BsaBI GATNNNNATC 2 cut(s) 1035, 1049
BsaJI CCNNGG 5 cut(s) 313, 355, 420, 450, 960
BsaWI WCCGGW 2 cut(s) 571, 742
BsaXI ACNNNNNCTCC 2 cut(s) 278, 308
Bsc4I CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
Bse118I RCCGGY 4 cut(s) 236, 677, 1003, 1018
Bse1I ACTGG 3 cut(s) 204, 536, 885
Bse21I CCTNAGG 1 cut(s) 25
Bse3DI GCAATG 1 cut(s) 502
Bse8I GATNNNNATC 2 cut(s) 1035, 1049
BseBI CCWGG 1 cut(s) 182
BseDI CCNNGG 5 cut(s) 313, 355, 420, 450, 960
BseGI GGATG 5 cut(s) 33, 37, 318, 588, 806
BseJI GATNNNNATC 2 cut(s) 1035, 1049
BseLI CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
BseMI GCAATG 1 cut(s) 502
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 3 cut(s) 204, 536, 885
BseRI GAGGAG 6 cut(s) 39, 94, 209, 212, 419, 437
BseXI GCAGC 1 cut(s) 787
Bsh1236I CGCG 2 cut(s) 617, 623
Bsh1285I CGRYCG 1 cut(s) 621
BshFI GGCC 4 cut(s) 203, 455, 884, 1083
BshNI GGYRCC 5 cut(s) 239, 368, 413, 461, 632
BsiEI CGRYCG 1 cut(s) 621
BsiHKAI GWGCWC 2 cut(s) 429, 834
BslFI GGGAC 3 cut(s) 425, 773, 936
BslI CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
BsmAI GTCTC 2 cut(s) 313, 647
BsmBI CGTCTC 1 cut(s) 313
BsmFI GGGAC 3 cut(s) 425, 773, 936
BsmI GAATGC 1 cut(s) 43
BsnI GGCC 4 cut(s) 203, 455, 884, 1083
Bsp1286I GDGCHC 2 cut(s) 429, 834
Bsp143I GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
Bsp19I CCATGG 1 cut(s) 960
Bsp68I TCGCGA 1 cut(s) 617
BspANI GGCC 4 cut(s) 203, 455, 884, 1083
BspCNI CTCAG 1 cut(s) 38
BspFNI CGCG 2 cut(s) 617, 623
BspLI GGNNCC 8 cut(s) 241, 370, 415, 463, 570, 634, 761, 952
BspMI ACCTGC 1 cut(s) 195
BspPI GGATC 2 cut(s) 692, 1058
BspT107I GGYRCC 5 cut(s) 239, 368, 413, 461, 632
BsrBI CCGCTC 1 cut(s) 324
BsrDI GCAATG 1 cut(s) 502
BsrFI RCCGGY 4 cut(s) 236, 677, 1003, 1018
BsrI ACTGG 3 cut(s) 204, 536, 885
BssAI RCCGGY 4 cut(s) 236, 677, 1003, 1018
BssECI CCNNGG 5 cut(s) 313, 355, 420, 450, 960
BssMI GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
BssT1I CCWWGG 2 cut(s) 450, 960
Bst2UI CCWGG 1 cut(s) 182
Bst4CI ACNGT 3 cut(s) 613, 913, 999
Bst6I CTCTTC 1 cut(s) 404
BstAPI GCANNNNNTGC 1 cut(s) 801
BstC8I GCNNGC 4 cut(s) 238, 679, 812, 1081
BstDEI CTNAG 1 cut(s) 25
BstDSI CCRYGG 2 cut(s) 355, 960
BstEII GGTNACC 1 cut(s) 574
BstF5I GGATG 5 cut(s) 33, 37, 318, 588, 806
BstFNI CGCG 2 cut(s) 617, 623
BstH2I RGCGCY 4 cut(s) 243, 372, 465, 636
BstHHI GCGC 6 cut(s) 242, 371, 449, 464, 625, 635
BstKTI GATC 8 cut(s) 294, 621, 687, 822, 843, 865, 1033, 1053
BstMAI GTCTC 2 cut(s) 313, 647
BstMBI GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
BstMCI CGRYCG 1 cut(s) 621
BstNI CCWGG 1 cut(s) 182
BstPAI GACNNNNGTC 1 cut(s) 305
BstPI GGTNACC 1 cut(s) 574
BstSCI CCNGG 1 cut(s) 180
BstUI CGCG 2 cut(s) 617, 623
BstV1I GCAGC 1 cut(s) 787
BstV2I GAAGAC 2 cut(s) 592, 738
BstX2I RGATCY 2 cut(s) 291, 862
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 2 cut(s) 291, 862
Bsu36I CCTNAGG 1 cut(s) 25
BsuRI GGCC 4 cut(s) 203, 455, 884, 1083
BtgI CCRYGG 2 cut(s) 355, 960
BtsCI GGATG 5 cut(s) 33, 37, 318, 588, 806
BtsIMutI CAGTG 3 cut(s) 197, 543, 892
BtuMI TCGCGA 1 cut(s) 617
BveI ACCTGC 1 cut(s) 195
Cac8I GCNNGC 4 cut(s) 238, 679, 812, 1081
CaiI CAGNNNCTG 2 cut(s) 181, 199
CfoI GCGC 6 cut(s) 242, 371, 449, 464, 625, 635
Cfr10I RCCGGY 4 cut(s) 236, 677, 1003, 1018
Cfr13I GGNCC 4 cut(s) 184, 394, 760, 950
CseI GACGC 6 cut(s) 19, 250, 356, 833, 965, 980
CspCI CAANNNNNGTGG 2 cut(s) 868, 903
CviAII CATG 5 cut(s) 520, 628, 961, 976, 1064
DdeI CTNAG 1 cut(s) 25
DinI GGCGCC 4 cut(s) 241, 370, 463, 634
DpnI GATC 8 cut(s) 293, 620, 686, 821, 842, 864, 1032, 1052
DpnII GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
DrdI GACNNNNNNGTC 1 cut(s) 392
DseDI GACNNNNNNGTC 1 cut(s) 392
Eam1104I CTCTTC 1 cut(s) 404
EarI CTCTTC 1 cut(s) 404
EciI GGCGGA 4 cut(s) 88, 223, 422, 886
Ecl136II GAGCTC 1 cut(s) 427
Eco130I CCWWGG 2 cut(s) 450, 960
Eco24I GRGCYC 1 cut(s) 429
Eco47I GGWCC 4 cut(s) 184, 394, 760, 950
Eco53kI GAGCTC 1 cut(s) 427
Eco57I CTGAAG 1 cut(s) 385
Eco81I CCTNAGG 1 cut(s) 25
Eco91I GGTNACC 1 cut(s) 574
EcoICRI GAGCTC 1 cut(s) 427
EcoO109I RGGNCCY 1 cut(s) 760
EcoO65I GGTNACC 1 cut(s) 574
EcoRII CCWGG 1 cut(s) 180
EcoT14I CCWWGG 2 cut(s) 450, 960
EcoT38I GRGCYC 1 cut(s) 429
EgeI GGCGCC 4 cut(s) 241, 370, 463, 634
EheI GGCGCC 4 cut(s) 241, 370, 463, 634
ErhI CCWWGG 2 cut(s) 450, 960
Esp3I CGTCTC 1 cut(s) 313
FaeI CATG 5 cut(s) 523, 631, 964, 979, 1067
FaiI YATR 6 cut(s) 248, 521, 629, 962, 977, 1065
FalI AAGNNNNNCTT 4 cut(s) 260, 292, 723, 755
FaqI GGGAC 3 cut(s) 425, 773, 936
FatI CATG 5 cut(s) 519, 627, 960, 975, 1063
FauI CCCGC 2 cut(s) 218, 682
FbaI TGATCA 1 cut(s) 1030
Fnu4HI GCNGC 3 cut(s) 663, 776, 869
FokI GGATG 5 cut(s) 20, 24, 305, 575, 813
FriOI GRGCYC 1 cut(s) 429
Fsp4HI GCNGC 3 cut(s) 663, 776, 869
GlaI GCGC 6 cut(s) 241, 370, 448, 463, 624, 634
GluI GCNGC 3 cut(s) 663, 776, 869
HaeII RGCGCY 4 cut(s) 243, 372, 465, 636
HaeIII GGCC 4 cut(s) 203, 455, 884, 1083
HgaI GACGC 6 cut(s) 19, 250, 356, 833, 965, 980
HhaI GCGC 6 cut(s) 242, 371, 449, 464, 625, 635
Hin1II CATG 5 cut(s) 523, 631, 964, 979, 1067
Hin6I GCGC 6 cut(s) 240, 369, 447, 462, 623, 633
HinP1I GCGC 6 cut(s) 240, 369, 447, 462, 623, 633
HincII GTYRAC 2 cut(s) 490, 970
HindII GTYRAC 2 cut(s) 490, 970
HinfI GANTC 2 cut(s) 874, 1036
HphI GGTGA 6 cut(s) 199, 472, 568, 637, 662, 844
Hpy166II GTNNAC 3 cut(s) 490, 852, 970
Hpy188I TCNGA 2 cut(s) 1035, 1088
Hpy188III TCNNGA 3 cut(s) 344, 616, 953
Hpy8I GTNNAC 3 cut(s) 490, 852, 970
Hpy99I CGWCG 9 cut(s) 266, 284, 350, 389, 617, 827, 860, 959, 1003
HpyAV CCTTC 5 cut(s) 214, 475, 568, 721, 749
HpyCH4III ACNGT 3 cut(s) 613, 913, 999
HpyCH4IV ACGT 3 cut(s) 387, 525, 848
HpyCH4V TGCA 5 cut(s) 111, 529, 750, 927, 979
HpyF3I CTNAG 1 cut(s) 25
HpySE526I ACGT 3 cut(s) 387, 525, 848
Hsp92II CATG 5 cut(s) 523, 631, 964, 979, 1067
HspAI GCGC 6 cut(s) 240, 369, 447, 462, 623, 633
KasI GGCGCC 4 cut(s) 239, 368, 461, 632
KroI GCCGGC 2 cut(s) 236, 677
KroNI GCCGGC 2 cut(s) 238, 679
Ksp22I TGATCA 1 cut(s) 1030
Kzo9I GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
LmnI GCTCC 7 cut(s) 329, 424, 432, 541, 574, 772, 784
Lsp1109I GCAGC 1 cut(s) 787
LweI GCATC 2 cut(s) 327, 791
MaeII ACGT 3 cut(s) 387, 525, 848
MaeIII GTNAC 3 cut(s) 478, 574, 1054
MalI GATC 8 cut(s) 293, 620, 686, 821, 842, 864, 1032, 1052
MbiI CCGCTC 1 cut(s) 324
MboI GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
MboII GAAGA 9 cut(s) 160, 163, 391, 592, 694, 736, 743, 892, 994
MfeI CAATTG 1 cut(s) 945
MflI RGATCY 2 cut(s) 291, 862
MhlI GDGCHC 2 cut(s) 429, 834
MluCI AATT 2 cut(s) 89, 945
Mly113I GGCGCC 4 cut(s) 240, 369, 462, 633
MlyI GAGTC 1 cut(s) 868
MreI CGCCGGCG 1 cut(s) 236
MroNI GCCGGC 2 cut(s) 236, 677
MslI CAYNNNNRTG 2 cut(s) 524, 593
MspA1I CMGCKG 2 cut(s) 778, 1079
MspR9I CCNGG 1 cut(s) 182
MunI CAATTG 1 cut(s) 945
Mva1269I GAATGC 1 cut(s) 43
MvaI CCWGG 1 cut(s) 182
MvnI CGCG 2 cut(s) 617, 623
NaeI GCCGGC 2 cut(s) 238, 679
NarI GGCGCC 4 cut(s) 240, 369, 462, 633
NcoI CCATGG 1 cut(s) 960
NdeII GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
NgoMIV GCCGGC 2 cut(s) 236, 677
NlaIII CATG 5 cut(s) 523, 631, 964, 979, 1067
NlaIV GGNNCC 8 cut(s) 241, 370, 415, 463, 570, 634, 761, 952
NmeAIII GCCGAG 2 cut(s) 294, 853
NmuCI GTSAC 3 cut(s) 478, 574, 1054
NruI TCGCGA 1 cut(s) 617
PcsI WCGNNNNNNNCGW 1 cut(s) 609
PctI GAATGC 1 cut(s) 43
PdiI GCCGGC 2 cut(s) 238, 679
PfeI GAWTC 1 cut(s) 1036
PflFI GACNNNGTC 1 cut(s) 611
PflMI CCANNNNNTGG 2 cut(s) 181, 199
PkrI GCNGC 3 cut(s) 664, 777, 870
Ple19I CGATCG 1 cut(s) 621
PleI GAGTC 1 cut(s) 868
PluTI GGCGCC 4 cut(s) 243, 372, 465, 636
PpsI GAGTC 1 cut(s) 868
PpuMI RGGWCCY 1 cut(s) 760
PshAI GACNNNNGTC 1 cut(s) 305
Psp124BI GAGCTC 1 cut(s) 429
Psp5II RGGWCCY 1 cut(s) 760
Psp6I CCWGG 1 cut(s) 180
PspEI GGTNACC 1 cut(s) 574
PspGI CCWGG 1 cut(s) 180
PspN4I GGNNCC 8 cut(s) 241, 370, 415, 463, 570, 634, 761, 952
PspPI GGNCC 4 cut(s) 184, 394, 760, 950
PspPPI RGGWCCY 1 cut(s) 760
PstNI CAGNNNCTG 2 cut(s) 181, 199
PsuI RGATCY 2 cut(s) 291, 862
PsyI GACNNNGTC 1 cut(s) 611
PvuI CGATCG 1 cut(s) 621
PvuII CAGCTG 2 cut(s) 778, 1079
RgaI GCGATCGC 1 cut(s) 621
RruI TCGCGA 1 cut(s) 617
RseI CAYNNNNRTG 2 cut(s) 524, 593
SacI GAGCTC 1 cut(s) 429
SatI GCNGC 3 cut(s) 663, 776, 869
Sau3AI GATC 8 cut(s) 291, 618, 684, 819, 840, 862, 1030, 1050
Sau96I GGNCC 4 cut(s) 184, 394, 760, 950
SchI GAGTC 1 cut(s) 868
ScrFI CCNGG 1 cut(s) 182
SduI GDGCHC 2 cut(s) 429, 834
SfaAI GCGATCGC 1 cut(s) 621
SfaNI GCATC 2 cut(s) 327, 791
SfoI GGCGCC 4 cut(s) 241, 370, 463, 634
SgfI GCGATCGC 1 cut(s) 621
SgrAI CRCCGGYG 1 cut(s) 236
SinI GGWCC 4 cut(s) 184, 394, 760, 950
SmiMI CAYNNNNRTG 2 cut(s) 524, 593
SmlI CTYRAG 1 cut(s) 878
SmoI CTYRAG 1 cut(s) 878
Sse9I AATT 2 cut(s) 89, 945
SspDI GGCGCC 4 cut(s) 239, 368, 461, 632
SstI GAGCTC 1 cut(s) 429
StyD4I CCNGG 1 cut(s) 180
StyI CCWWGG 2 cut(s) 450, 960
TaaI ACNGT 3 cut(s) 613, 913, 999
TaiI ACGT 3 cut(s) 390, 528, 851
TaqI TCGA 3 cut(s) 345, 561, 822
TasI AATT 2 cut(s) 89, 945
TauI GCSGC 2 cut(s) 665, 871
TfiI GAWTC 1 cut(s) 1036
TscAI CASTG 3 cut(s) 204, 543, 892
TseFI GTSAC 3 cut(s) 478, 574, 1054
TseI GCWGC 1 cut(s) 775
Tsp45I GTSAC 3 cut(s) 478, 574, 1054
TspDTI ATGAA 2 cut(s) 536, 737
TspGWI ACGGA 3 cut(s) 466, 475, 873
TspRI CASTG 3 cut(s) 204, 543, 892
Tth111I GACNNNGTC 1 cut(s) 611
Van91I CCANNNNNTGG 2 cut(s) 181, 199
VpaK11BI GGWCC 4 cut(s) 184, 394, 760, 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.