pycom05g18280

Belongs to the SIS family. GutQ KpsF subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
21257698 .. 21258878
1181 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g18280.1

Sequence Viewer

Length: 1095 bp
ATGGGTTCTCTGCCACCTTTTTTCTCAGATTTCATCAATCCGCATTCTCCTCCCAATACCAAAACCACCACCACCACCACCACAACAACCACCCAATTCTCCTCCGCCTCCTCCTGCATTGACGAAACTACCCTCCTAAACCTTTTCAAATCCCAACAGAGCCACCTCAACTTCTTCTTCCAGCACCTGGACCTGCCCCAGACACTGGCCTTCACCCGCACCCTCCTCCTCCAATCATCCGCCGGCGCCACTATATTTTTCTCCGGCGTAGGCAAGTCCGGCTTCGTCGCCCACAAGATCTCCCAGACCCTCGTCTCCCTCGGCATCCGCTCCGGCTTTCTCTCCCCTCTCGACGCCCTCCACGGCGACATCGGCGCCCTCTCCAAAACCGACGTTTTGGTCCTCTTCAGCAAGTCCGGCACCACCGAGGAGCTCCTCCGCCTCGTCCCCTGCGCCAAGGCCAAAGGCGCCTTCCTCATCTCCGTCACCTCCGTTGACGGCAATGCCCTTGCCTCCCTCTGCGACATGAACGTGCATTTGCCAGTGGAGCGAGAGCTCTGCCCCTTCGATTTGGCTCCGGTCACCTCCACCGCCATCCAAATGGTCTTCGGCGACACCGTGGCGATCGCGCTCATGGGCGCCAAAAGTCTCACCAAAGAACAATACGCCGCCAATCACCCCGCCGGCAGGATCGGCAAATCCCTTATCTTCAAGGTCAAAGATGTAATGAAGAAGGAAGACGAGCTTCCGGTGTGCAAGGAAGGGGACCTGATAATGGAGCAGCTGGTGGAGCTGACGAGCAAGGGGTGCGGTTGCCTGCTTGTGATCGACGCCGAGCACCGCCTGATCGGCACGTTCACCGATGGAGATCTGCGGCGGACTCTCAAGGCCAGTGGGGAAGCTATCTTCAAGCTCACGGTTGGGGAAGTGTGCAACAGACACCCCAGAACAATTGGTCCCGACGCCATGGCAGTTGACGCCATGCAGAAGATGGAAGCGCCACCGTCGCCGGTTCAGTTCTTGCCGGTCATCAATGATCAGAATCAAGTGATTGGGATCGTCACTTTACATGGATTGGTTTCAGCTGGCCTCTGA

Protein Analysis

365

Amino Acids

38.98

Weight (kDa)

6.2

Isoelectric Point (pI)

31.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SIS PF01380 84 - 209 9.8e-18 SIS domain
CBS PF00571 307 - 362 2.7e-08 CBS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012365)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 398
Acc36I ACCTGC 1 cut(s) 201
AccB1I GGYRCC 5 cut(s) 245, 374, 419, 467, 638
AccB7I CCANNNNNTGG 2 cut(s) 187, 205
AccBSI CCGCTC 1 cut(s) 330
AccII CGCG 1 cut(s) 629
AclWI GGATC 2 cut(s) 698, 1064
AcuI CTGAAG 1 cut(s) 391
AcyI GRCGYC 8 cut(s) 246, 354, 375, 468, 639, 831, 963, 978
AfiI CCNNNNNNNGG 4 cut(s) 187, 205, 687, 775
AgsI TTSAA 3 cut(s) 148, 712, 910
AjnI CCWGG 1 cut(s) 186
AjuI GAANNNNNNNTTGG 2 cut(s) 455, 487
AloI GAACNNNNNNTCC 2 cut(s) 940, 972
AluBI AGCT 8 cut(s) 433, 556, 745, 784, 793, 902, 913, 1085
AluI AGCT 8 cut(s) 433, 556, 745, 784, 793, 902, 913, 1085
Alw21I GWGCWC 3 cut(s) 435, 558, 840
Alw26I GTCTC 2 cut(s) 319, 653
AlwI GGATC 2 cut(s) 698, 1064
AlwNI CAGNNNCTG 2 cut(s) 187, 205
AoxI GGCC 4 cut(s) 207, 459, 888, 1087
ApeKI GCWGC 1 cut(s) 781
AsiSI GCGATCGC 1 cut(s) 627
AspLEI GCGC 7 cut(s) 248, 377, 455, 470, 631, 641, 1000
AspS9I GGNCC 4 cut(s) 190, 400, 766, 956
AsuHPI GGTGA 6 cut(s) 205, 478, 574, 643, 668, 850
AvaII GGWCC 4 cut(s) 190, 400, 766, 956
BanI GGYRCC 5 cut(s) 245, 374, 419, 467, 638
BanII GRGCYC 2 cut(s) 435, 558
BbsI GAAGAC 2 cut(s) 598, 744
Bbv12I GWGCWC 3 cut(s) 435, 558, 840
BbvI GCAGC 1 cut(s) 793
BccI CCATC 3 cut(s) 602, 857, 985
BceAI ACGGC 2 cut(s) 379, 514
BcgI CGANNNNNNTGC 2 cut(s) 540, 574
BciT130I CCWGG 1 cut(s) 188
BclI TGATCA 1 cut(s) 1036
BcoDI GTCTC 2 cut(s) 319, 653
BfoI RGCGCY 5 cut(s) 249, 378, 471, 642, 1001
BfuAI ACCTGC 1 cut(s) 201
BglI GCCNNNNNGGC 1 cut(s) 849
BglII AGATCT 2 cut(s) 297, 868
BisI GCNGC 3 cut(s) 669, 782, 875
BlsI GCNGC 3 cut(s) 670, 783, 876
Bme1390I CCNGG 1 cut(s) 188
Bme18I GGWCC 4 cut(s) 190, 400, 766, 956
BmgT120I GGNCC 4 cut(s) 190, 400, 766, 956
BmiI GGNNCC 8 cut(s) 247, 376, 421, 469, 576, 640, 767, 958
BmrFI CCNGG 1 cut(s) 188
BmsI GCATC 1 cut(s) 333
BoxI GACNNNNGTC 1 cut(s) 311
BpiI GAAGAC 2 cut(s) 598, 744
BpuEI CTTGAG 1 cut(s) 869
BsaBI GATNNNNATC 3 cut(s) 867, 1041, 1055
BsaHI GRCGYC 8 cut(s) 246, 354, 375, 468, 639, 831, 963, 978
BsaJI CCNNGG 6 cut(s) 319, 361, 426, 456, 618, 966
BsaWI WCCGGW 2 cut(s) 577, 748
BsaXI ACNNNNNCTCC 2 cut(s) 284, 314
Bsc4I CCNNNNNNNGG 4 cut(s) 187, 205, 687, 775
Bse118I RCCGGY 4 cut(s) 242, 683, 1009, 1024
Bse1I ACTGG 3 cut(s) 210, 542, 891
Bse3DI GCAATG 1 cut(s) 508
Bse8I GATNNNNATC 3 cut(s) 867, 1041, 1055
BseBI CCWGG 1 cut(s) 188
BseDI CCNNGG 6 cut(s) 319, 361, 426, 456, 618, 966
BseGI GGATG 3 cut(s) 236, 324, 594
BseJI GATNNNNATC 3 cut(s) 867, 1041, 1055
BseLI CCNNNNNNNGG 4 cut(s) 187, 205, 687, 775
BseMI GCAATG 1 cut(s) 508
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 3 cut(s) 210, 542, 891
BseRI GAGGAG 7 cut(s) 39, 91, 100, 215, 218, 425, 443
BseXI GCAGC 1 cut(s) 793
Bsh1236I CGCG 1 cut(s) 629
Bsh1285I CGRYCG 1 cut(s) 627
BshFI GGCC 4 cut(s) 209, 461, 890, 1089
BshNI GGYRCC 5 cut(s) 245, 374, 419, 467, 638
BsiEI CGRYCG 1 cut(s) 627
BsiHKAI GWGCWC 3 cut(s) 435, 558, 840
BslFI GGGAC 3 cut(s) 431, 779, 942
BslI CCNNNNNNNGG 4 cut(s) 187, 205, 687, 775
BsmAI GTCTC 2 cut(s) 319, 653
BsmBI CGTCTC 1 cut(s) 319
BsmFI GGGAC 3 cut(s) 431, 779, 942
BsmI GAATGC 1 cut(s) 43
BsnI GGCC 4 cut(s) 209, 461, 890, 1089
Bsp1286I GDGCHC 3 cut(s) 435, 558, 840
Bsp143I GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
Bsp19I CCATGG 1 cut(s) 966
BspANI GGCC 4 cut(s) 209, 461, 890, 1089
BspCNI CTCAG 1 cut(s) 38
BspFNI CGCG 1 cut(s) 629
BspLI GGNNCC 8 cut(s) 247, 376, 421, 469, 576, 640, 767, 958
BspMI ACCTGC 1 cut(s) 201
BspPI GGATC 2 cut(s) 698, 1064
BspT107I GGYRCC 5 cut(s) 245, 374, 419, 467, 638
BsrBI CCGCTC 1 cut(s) 330
BsrDI GCAATG 1 cut(s) 508
BsrFI RCCGGY 4 cut(s) 242, 683, 1009, 1024
BsrI ACTGG 3 cut(s) 210, 542, 891
BssAI RCCGGY 4 cut(s) 242, 683, 1009, 1024
BssECI CCNNGG 6 cut(s) 319, 361, 426, 456, 618, 966
BssMI GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
BssNI GRCGYC 8 cut(s) 246, 354, 375, 468, 639, 831, 963, 978
BssT1I CCWWGG 2 cut(s) 456, 966
Bst2UI CCWGG 1 cut(s) 188
Bst4CI ACNGT 3 cut(s) 619, 919, 1005
Bst6I CTCTTC 1 cut(s) 410
BstACI GRCGYC 8 cut(s) 246, 354, 375, 468, 639, 831, 963, 978
BstAPI GCANNNNNTGC 1 cut(s) 807
BstC8I GCNNGC 4 cut(s) 244, 685, 818, 1087
BstDEI CTNAG 1 cut(s) 25
BstDSI CCRYGG 3 cut(s) 361, 618, 966
BstEII GGTNACC 1 cut(s) 580
BstF5I GGATG 3 cut(s) 236, 324, 594
BstFNI CGCG 1 cut(s) 629
BstH2I RGCGCY 5 cut(s) 249, 378, 471, 642, 1001
BstHHI GCGC 7 cut(s) 248, 377, 455, 470, 631, 641, 1000
BstKTI GATC 8 cut(s) 300, 627, 693, 828, 849, 871, 1039, 1059
BstMAI GTCTC 2 cut(s) 319, 653
BstMBI GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
BstMCI CGRYCG 1 cut(s) 627
BstNI CCWGG 1 cut(s) 188
BstPAI GACNNNNGTC 1 cut(s) 311
BstPI GGTNACC 1 cut(s) 580
BstSCI CCNGG 1 cut(s) 186
BstUI CGCG 1 cut(s) 629
BstV1I GCAGC 1 cut(s) 793
BstV2I GAAGAC 2 cut(s) 598, 744
BstX2I RGATCY 2 cut(s) 297, 868
BstXI CCANNNNNNTGG 1 cut(s) 601
BstYI RGATCY 2 cut(s) 297, 868
BsuRI GGCC 4 cut(s) 209, 461, 890, 1089
BtgI CCRYGG 3 cut(s) 361, 618, 966
BtsCI GGATG 3 cut(s) 236, 324, 594
BtsIMutI CAGTG 3 cut(s) 203, 549, 898
BveI ACCTGC 1 cut(s) 201
Cac8I GCNNGC 4 cut(s) 244, 685, 818, 1087
CaiI CAGNNNCTG 2 cut(s) 187, 205
CfoI GCGC 7 cut(s) 248, 377, 455, 470, 631, 641, 1000
Cfr10I RCCGGY 4 cut(s) 242, 683, 1009, 1024
Cfr13I GGNCC 4 cut(s) 190, 400, 766, 956
CseI GACGC 4 cut(s) 362, 839, 971, 986
CspCI CAANNNNNGTGG 2 cut(s) 874, 909
CviAII CATG 5 cut(s) 526, 634, 967, 982, 1070
DdeI CTNAG 1 cut(s) 25
DinI GGCGCC 4 cut(s) 247, 376, 469, 640
DpnI GATC 8 cut(s) 299, 626, 692, 827, 848, 870, 1038, 1058
DpnII GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
DrdI GACNNNNNNGTC 1 cut(s) 398
DseDI GACNNNNNNGTC 1 cut(s) 398
Eam1104I CTCTTC 1 cut(s) 410
EarI CTCTTC 1 cut(s) 410
EciI GGCGGA 4 cut(s) 94, 229, 428, 892
Ecl136II GAGCTC 2 cut(s) 433, 556
Eco130I CCWWGG 2 cut(s) 456, 966
Eco24I GRGCYC 2 cut(s) 435, 558
Eco47I GGWCC 4 cut(s) 190, 400, 766, 956
Eco53kI GAGCTC 2 cut(s) 433, 556
Eco57I CTGAAG 1 cut(s) 391
Eco91I GGTNACC 1 cut(s) 580
EcoICRI GAGCTC 2 cut(s) 433, 556
EcoO109I RGGNCCY 1 cut(s) 766
EcoO65I GGTNACC 1 cut(s) 580
EcoRII CCWGG 1 cut(s) 186
EcoT14I CCWWGG 2 cut(s) 456, 966
EcoT38I GRGCYC 2 cut(s) 435, 558
EgeI GGCGCC 4 cut(s) 247, 376, 469, 640
EheI GGCGCC 4 cut(s) 247, 376, 469, 640
ErhI CCWWGG 2 cut(s) 456, 966
Esp3I CGTCTC 1 cut(s) 319
FaeI CATG 5 cut(s) 529, 637, 970, 985, 1073
FaiI YATR 6 cut(s) 254, 527, 635, 968, 983, 1071
FalI AAGNNNNNCTT 4 cut(s) 266, 298, 729, 761
FaqI GGGAC 3 cut(s) 431, 779, 942
FatI CATG 5 cut(s) 525, 633, 966, 981, 1069
FauI CCCGC 2 cut(s) 224, 688
FbaI TGATCA 1 cut(s) 1036
Fnu4HI GCNGC 3 cut(s) 669, 782, 875
FokI GGATG 3 cut(s) 223, 311, 581
FriOI GRGCYC 2 cut(s) 435, 558
Fsp4HI GCNGC 3 cut(s) 669, 782, 875
GlaI GCGC 7 cut(s) 247, 376, 454, 469, 630, 640, 999
GluI GCNGC 3 cut(s) 669, 782, 875
HaeII RGCGCY 5 cut(s) 249, 378, 471, 642, 1001
HaeIII GGCC 4 cut(s) 209, 461, 890, 1089
HgaI GACGC 4 cut(s) 362, 839, 971, 986
HhaI GCGC 7 cut(s) 248, 377, 455, 470, 631, 641, 1000
Hin1I GRCGYC 8 cut(s) 246, 354, 375, 468, 639, 831, 963, 978
Hin1II CATG 5 cut(s) 529, 637, 970, 985, 1073
Hin6I GCGC 7 cut(s) 246, 375, 453, 468, 629, 639, 998
HinP1I GCGC 7 cut(s) 246, 375, 453, 468, 629, 639, 998
HincII GTYRAC 2 cut(s) 496, 976
HindII GTYRAC 2 cut(s) 496, 976
HinfI GANTC 2 cut(s) 880, 1042
HphI GGTGA 6 cut(s) 205, 478, 574, 643, 668, 850
Hpy166II GTNNAC 3 cut(s) 496, 858, 976
Hpy188I TCNGA 3 cut(s) 28, 1041, 1094
Hpy188III TCNNGA 2 cut(s) 350, 959
Hpy8I GTNNAC 3 cut(s) 496, 858, 976
Hpy99I CGWCG 6 cut(s) 290, 356, 395, 833, 965, 1009
HpyAV CCTTC 5 cut(s) 220, 481, 574, 727, 755
HpyCH4III ACNGT 3 cut(s) 619, 919, 1005
HpyCH4IV ACGT 3 cut(s) 393, 531, 854
HpyCH4V TGCA 5 cut(s) 117, 535, 756, 933, 985
HpyF3I CTNAG 1 cut(s) 25
HpySE526I ACGT 3 cut(s) 393, 531, 854
Hsp92I GRCGYC 8 cut(s) 246, 354, 375, 468, 639, 831, 963, 978
Hsp92II CATG 5 cut(s) 529, 637, 970, 985, 1073
HspAI GCGC 7 cut(s) 246, 375, 453, 468, 629, 639, 998
KasI GGCGCC 4 cut(s) 245, 374, 467, 638
KroI GCCGGC 2 cut(s) 242, 683
KroNI GCCGGC 2 cut(s) 244, 685
Ksp22I TGATCA 1 cut(s) 1036
Kzo9I GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
LmnI GCTCC 7 cut(s) 335, 430, 438, 547, 580, 778, 790
Lsp1109I GCAGC 1 cut(s) 793
LweI GCATC 1 cut(s) 333
MaeII ACGT 3 cut(s) 393, 531, 854
MaeIII GTNAC 3 cut(s) 484, 580, 1060
MalI GATC 8 cut(s) 299, 626, 692, 827, 848, 870, 1038, 1058
MbiI CCGCTC 1 cut(s) 330
MboI GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
MboII GAAGA 9 cut(s) 166, 169, 397, 598, 700, 742, 749, 898, 1000
MfeI CAATTG 1 cut(s) 951
MflI RGATCY 2 cut(s) 297, 868
MhlI GDGCHC 3 cut(s) 435, 558, 840
MluCI AATT 2 cut(s) 95, 951
Mly113I GGCGCC 4 cut(s) 246, 375, 468, 639
MlyI GAGTC 1 cut(s) 874
MreI CGCCGGCG 1 cut(s) 242
MroNI GCCGGC 2 cut(s) 242, 683
MslI CAYNNNNRTG 2 cut(s) 530, 599
MspA1I CMGCKG 2 cut(s) 784, 1085
MspR9I CCNGG 1 cut(s) 188
MunI CAATTG 1 cut(s) 951
Mva1269I GAATGC 1 cut(s) 43
MvaI CCWGG 1 cut(s) 188
MvnI CGCG 1 cut(s) 629
NaeI GCCGGC 2 cut(s) 244, 685
NarI GGCGCC 4 cut(s) 246, 375, 468, 639
NcoI CCATGG 1 cut(s) 966
NdeII GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
NgoMIV GCCGGC 2 cut(s) 242, 683
NlaIII CATG 5 cut(s) 529, 637, 970, 985, 1073
NlaIV GGNNCC 8 cut(s) 247, 376, 421, 469, 576, 640, 767, 958
NmeAIII GCCGAG 2 cut(s) 300, 859
NmuCI GTSAC 3 cut(s) 484, 580, 1060
PcsI WCGNNNNNNNCGW 1 cut(s) 615
PctI GAATGC 1 cut(s) 43
PdiI GCCGGC 2 cut(s) 244, 685
PfeI GAWTC 1 cut(s) 1042
PflMI CCANNNNNTGG 2 cut(s) 187, 205
PkrI GCNGC 3 cut(s) 670, 783, 876
Ple19I CGATCG 1 cut(s) 627
PleI GAGTC 1 cut(s) 874
PluTI GGCGCC 4 cut(s) 249, 378, 471, 642
PpsI GAGTC 1 cut(s) 874
PpuMI RGGWCCY 1 cut(s) 766
PshAI GACNNNNGTC 1 cut(s) 311
Psp124BI GAGCTC 2 cut(s) 435, 558
Psp5II RGGWCCY 1 cut(s) 766
Psp6I CCWGG 1 cut(s) 186
PspEI GGTNACC 1 cut(s) 580
PspGI CCWGG 1 cut(s) 186
PspN4I GGNNCC 8 cut(s) 247, 376, 421, 469, 576, 640, 767, 958
PspPI GGNCC 4 cut(s) 190, 400, 766, 956
PspPPI RGGWCCY 1 cut(s) 766
PstNI CAGNNNCTG 2 cut(s) 187, 205
PsuI RGATCY 2 cut(s) 297, 868
PvuI CGATCG 1 cut(s) 627
PvuII CAGCTG 2 cut(s) 784, 1085
RgaI GCGATCGC 1 cut(s) 627
RseI CAYNNNNRTG 2 cut(s) 530, 599
SacI GAGCTC 2 cut(s) 435, 558
SatI GCNGC 3 cut(s) 669, 782, 875
Sau3AI GATC 8 cut(s) 297, 624, 690, 825, 846, 868, 1036, 1056
Sau96I GGNCC 4 cut(s) 190, 400, 766, 956
SchI GAGTC 1 cut(s) 874
ScrFI CCNGG 1 cut(s) 188
SduI GDGCHC 3 cut(s) 435, 558, 840
SfaAI GCGATCGC 1 cut(s) 627
SfaNI GCATC 1 cut(s) 333
SfoI GGCGCC 4 cut(s) 247, 376, 469, 640
SgfI GCGATCGC 1 cut(s) 627
SgrAI CRCCGGYG 1 cut(s) 242
SinI GGWCC 4 cut(s) 190, 400, 766, 956
SmiMI CAYNNNNRTG 2 cut(s) 530, 599
SmlI CTYRAG 1 cut(s) 884
SmoI CTYRAG 1 cut(s) 884
Sse9I AATT 2 cut(s) 95, 951
SspDI GGCGCC 4 cut(s) 245, 374, 467, 638
SstI GAGCTC 2 cut(s) 435, 558
StyD4I CCNGG 1 cut(s) 186
StyI CCWWGG 2 cut(s) 456, 966
TaaI ACNGT 3 cut(s) 619, 919, 1005
TaiI ACGT 3 cut(s) 396, 534, 857
TaqI TCGA 3 cut(s) 351, 567, 828
TasI AATT 2 cut(s) 95, 951
TauI GCSGC 2 cut(s) 671, 877
TfiI GAWTC 1 cut(s) 1042
TscAI CASTG 3 cut(s) 210, 549, 898
TseFI GTSAC 3 cut(s) 484, 580, 1060
TseI GCWGC 1 cut(s) 781
Tsp45I GTSAC 3 cut(s) 484, 580, 1060
TspDTI ATGAA 3 cut(s) 22, 542, 743
TspGWI ACGGA 2 cut(s) 472, 481
TspRI CASTG 3 cut(s) 210, 549, 898
Van91I CCANNNNNTGG 2 cut(s) 187, 205
VpaK11BI GGWCC 4 cut(s) 190, 400, 766, 956
XcmI CCANNNNNNNNNTGG 1 cut(s) 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.