MD10G1182800.v1.1

Belongs to the SIS family. GutQ KpsF subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
27561508 .. 27564468
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1182800.v1.1.491

Sequence Viewer

Length: 1089 bp
ATGGGTTCTCTGCCACCTTCTTCCGCAGACTTCATCAATCCGCATTCCCCTCCCAAAACCAAAACCACCACCACAACCCAATTCTCCTCCTCCGCCGCCTCCCCCTTCTGCATGGACGAAACTACCCTCCTAAACCTGTTCAAATCCCAACAGAGCCACCTCAACTTCTTCTTCCAGCACCTGGACCTGCCCCGCACACTGGCTTTCACCCAAACCCTCCTTCTACAATCCTCCGTCGGCGCCACTATATTTTTCTCAGGTGTCGGCAAGTCCGGCTTCGTCGCCCACAAGATCTCCCAGACTCTTGTCTCCCTCGGCATCCGCTCAGGCTTCCTCTCCCCTCTCGACGCCCTCCACGGCGACATCGGCGCACTCTCCAAAACCGACATTTTGGTCCTCTTCAGCAAGTCCGGCACCACCGAGGAGCTCCTCCGCCTCGTCCCCTGCGCCAAGGCCAAAGGCGCCTTCCTCATCTCCGTCACCTCCGTTGACGGCAATGCCCTCGCCTCCGTCTGCGACATGAACGTGCATTTGCCCTTGCAGCGAGAGCTCTGCCCCTTTGATTTGGCTCCGGTCACCTCCACTGCCATCCAAATGGTTTTCGGCGACACCGTCGCGATCGCGCTCATGGGCGCCAAAAATCTCACCAAGGAACAATACGCCGCCAATCACCCCGCCGGCAGGATCGGCAAATCCCTCATCTTCAAGGTGAATGATGTGATGAAAAAGGAAGACGAGCTTCCGGTCTGCAAGGAAGGGGACCTGATAATGGAGCAGCTGGTGAAGCTGACGAGCAAAGGATGTGGTTGCCTGCTTGTGATCGACGCCGAGCACCGCCTGATCGGCACGTTCACCGACGGAGATCTGCGGCGGACTCTCAAGGCCAGTGGGGAAGCTATCTTCAAGCTCACGGTTGGTGAAATGTGCAACAGACATCCCAGAACAATAGGTCCCGACGCTATGGCGGTCGAGGCCATGCAGAAGATGGAAGCGCCGCCGTCGCCGGTTCAGTTCTTGCCGGTCATCAATGACCAGAATCAAGTGATTGGGATCGTCACTCTGCATGGATTAGTTTCAGCTGGCCTCTGA

Protein Analysis

363

Amino Acids

38.78

Weight (kDa)

6.79

Isoelectric Point (pI)

34.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SIS PF01380 82 - 207 1.2e-15 SIS domain
CBS PF00571 305 - 360 6.6e-08 CBS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012365)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 392
Acc36I ACCTGC 1 cut(s) 195
AccB1I GGYRCC 4 cut(s) 239, 413, 461, 632
AccB7I CCANNNNNTGG 1 cut(s) 181
AccBSI CCGCTC 1 cut(s) 324
AccII CGCG 2 cut(s) 617, 623
AclWI GGATC 2 cut(s) 692, 1058
AcuI CTGAAG 1 cut(s) 385
AcyI GRCGYC 5 cut(s) 240, 348, 462, 633, 825
AfiI CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
AgsI TTSAA 3 cut(s) 142, 706, 904
AjnI CCWGG 1 cut(s) 180
AjuI GAANNNNNNNTTGG 4 cut(s) 204, 236, 449, 481
AloI GAACNNNNNNTCC 2 cut(s) 934, 966
AluBI AGCT 8 cut(s) 427, 550, 739, 778, 787, 896, 907, 1079
AluI AGCT 8 cut(s) 427, 550, 739, 778, 787, 896, 907, 1079
Alw21I GWGCWC 3 cut(s) 429, 552, 834
Alw26I GTCTC 1 cut(s) 313
AlwI GGATC 2 cut(s) 692, 1058
AlwNI CAGNNNCTG 1 cut(s) 181
AoxI GGCC 4 cut(s) 453, 882, 972, 1081
ApeKI GCWGC 2 cut(s) 541, 775
AsiSI GCGATCGC 1 cut(s) 621
AspLEI GCGC 7 cut(s) 242, 371, 449, 464, 625, 635, 994
AspS9I GGNCC 4 cut(s) 184, 394, 760, 950
AsuHPI GGTGA 9 cut(s) 199, 472, 568, 637, 662, 721, 793, 844, 929
AvaII GGWCC 4 cut(s) 184, 394, 760, 950
BanI GGYRCC 4 cut(s) 239, 413, 461, 632
BanII GRGCYC 2 cut(s) 429, 552
BbsI GAAGAC 1 cut(s) 738
Bbv12I GWGCWC 3 cut(s) 429, 552, 834
BbvI GCAGC 2 cut(s) 553, 787
BccI CCATC 2 cut(s) 596, 979
BceAI ACGGC 3 cut(s) 373, 508, 982
BcgI CGANNNNNNTGC 4 cut(s) 484, 518, 534, 568
BciT130I CCWGG 1 cut(s) 182
BcoDI GTCTC 1 cut(s) 313
BfoI RGCGCY 4 cut(s) 243, 465, 636, 995
BfuAI ACCTGC 1 cut(s) 195
BglI GCCNNNNNGGC 1 cut(s) 843
BglII AGATCT 2 cut(s) 291, 862
BisI GCNGC 6 cut(s) 96, 542, 663, 776, 869, 995
BlsI GCNGC 6 cut(s) 97, 543, 664, 777, 870, 996
Bme1390I CCNGG 1 cut(s) 182
Bme18I GGWCC 4 cut(s) 184, 394, 760, 950
BmgT120I GGNCC 4 cut(s) 184, 394, 760, 950
BmiI GGNNCC 7 cut(s) 241, 415, 463, 570, 634, 761, 952
BmrFI CCNGG 1 cut(s) 182
BmsI GCATC 1 cut(s) 327
BoxI GACNNNNGTC 1 cut(s) 305
BpiI GAAGAC 1 cut(s) 738
Bpu10I CCTNAGC 1 cut(s) 325
BpuEI CTTGAG 1 cut(s) 863
BsaBI GATNNNNATC 1 cut(s) 1049
BsaHI GRCGYC 5 cut(s) 240, 348, 462, 633, 825
BsaJI CCNNGG 5 cut(s) 313, 355, 420, 450, 648
BsaWI WCCGGW 2 cut(s) 571, 742
BsaXI ACNNNNNCTCC 2 cut(s) 278, 308
Bsc4I CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
Bse118I RCCGGY 3 cut(s) 677, 1003, 1018
Bse1I ACTGG 2 cut(s) 204, 885
Bse3DI GCAATG 1 cut(s) 502
Bse8I GATNNNNATC 1 cut(s) 1049
BseBI CCWGG 1 cut(s) 182
BseDI CCNNGG 5 cut(s) 313, 355, 420, 450, 648
BseGI GGATG 4 cut(s) 318, 588, 806, 934
BseJI GATNNNNATC 1 cut(s) 1049
BseLI CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
BseMI GCAATG 1 cut(s) 502
BseMII CTCAG 2 cut(s) 270, 339
BseNI ACTGG 2 cut(s) 204, 885
BseRI GAGGAG 4 cut(s) 76, 79, 419, 437
BseXI GCAGC 2 cut(s) 553, 787
Bsh1236I CGCG 2 cut(s) 617, 623
Bsh1285I CGRYCG 2 cut(s) 621, 969
BshFI GGCC 4 cut(s) 455, 884, 974, 1083
BshNI GGYRCC 4 cut(s) 239, 413, 461, 632
BsiEI CGRYCG 2 cut(s) 621, 969
BsiHKAI GWGCWC 3 cut(s) 429, 552, 834
BsiSI CCGG 7 cut(s) 273, 411, 572, 678, 743, 1004, 1019
BslFI GGGAC 3 cut(s) 425, 773, 936
BslI CCNNNNNNNGG 4 cut(s) 181, 199, 681, 769
BsmAI GTCTC 1 cut(s) 313
BsmFI GGGAC 3 cut(s) 425, 773, 936
BsmI GAATGC 1 cut(s) 43
BsnI GGCC 4 cut(s) 455, 884, 974, 1083
Bsp1286I GDGCHC 3 cut(s) 429, 552, 834
Bsp143I GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
Bsp68I TCGCGA 1 cut(s) 617
BspANI GGCC 4 cut(s) 455, 884, 974, 1083
BspCNI CTCAG 2 cut(s) 269, 338
BspFNI CGCG 2 cut(s) 617, 623
BspLI GGNNCC 7 cut(s) 241, 415, 463, 570, 634, 761, 952
BspMI ACCTGC 1 cut(s) 195
BspPI GGATC 2 cut(s) 692, 1058
BspT107I GGYRCC 4 cut(s) 239, 413, 461, 632
BsrBI CCGCTC 1 cut(s) 324
BsrDI GCAATG 1 cut(s) 502
BsrFI RCCGGY 3 cut(s) 677, 1003, 1018
BsrI ACTGG 2 cut(s) 204, 885
BssAI RCCGGY 3 cut(s) 677, 1003, 1018
BssECI CCNNGG 5 cut(s) 313, 355, 420, 450, 648
BssMI GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
BssNI GRCGYC 5 cut(s) 240, 348, 462, 633, 825
BssT1I CCWWGG 2 cut(s) 450, 648
Bst2UI CCWGG 1 cut(s) 182
Bst4CI ACNGT 2 cut(s) 613, 913
Bst6I CTCTTC 1 cut(s) 404
BstACI GRCGYC 5 cut(s) 240, 348, 462, 633, 825
BstC8I GCNNGC 3 cut(s) 679, 812, 1081
BstDEI CTNAG 2 cut(s) 256, 325
BstDSI CCRYGG 1 cut(s) 355
BstEII GGTNACC 1 cut(s) 574
BstF5I GGATG 4 cut(s) 318, 588, 806, 934
BstFNI CGCG 2 cut(s) 617, 623
BstH2I RGCGCY 4 cut(s) 243, 465, 636, 995
BstHHI GCGC 7 cut(s) 242, 371, 449, 464, 625, 635, 994
BstKTI GATC 7 cut(s) 294, 621, 687, 822, 843, 865, 1053
BstMAI GTCTC 1 cut(s) 313
BstMBI GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
BstMCI CGRYCG 2 cut(s) 621, 969
BstNI CCWGG 1 cut(s) 182
BstPAI GACNNNNGTC 1 cut(s) 305
BstPI GGTNACC 1 cut(s) 574
BstSCI CCNGG 1 cut(s) 180
BstUI CGCG 2 cut(s) 617, 623
BstV1I GCAGC 2 cut(s) 553, 787
BstV2I GAAGAC 1 cut(s) 738
BstX2I RGATCY 2 cut(s) 291, 862
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 2 cut(s) 291, 862
BsuRI GGCC 4 cut(s) 455, 884, 974, 1083
BtgI CCRYGG 1 cut(s) 355
BtsCI GGATG 4 cut(s) 318, 588, 806, 934
BtsI GCAGTG 1 cut(s) 582
BtsIMutI CAGTG 3 cut(s) 197, 582, 892
BtuMI TCGCGA 1 cut(s) 617
BveI ACCTGC 1 cut(s) 195
Cac8I GCNNGC 3 cut(s) 679, 812, 1081
CaiI CAGNNNCTG 1 cut(s) 181
CfoI GCGC 7 cut(s) 242, 371, 449, 464, 625, 635, 994
Cfr10I RCCGGY 3 cut(s) 677, 1003, 1018
Cfr13I GGNCC 4 cut(s) 184, 394, 760, 950
CseI GACGC 3 cut(s) 356, 833, 965
CspCI CAANNNNNGTGG 4 cut(s) 784, 819, 868, 903
CviAII CATG 5 cut(s) 112, 520, 628, 976, 1064
DdeI CTNAG 2 cut(s) 256, 325
DinI GGCGCC 3 cut(s) 241, 463, 634
DpnI GATC 7 cut(s) 293, 620, 686, 821, 842, 864, 1052
DpnII GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
DrdI GACNNNNNNGTC 1 cut(s) 392
DseDI GACNNNNNNGTC 1 cut(s) 392
Eam1104I CTCTTC 1 cut(s) 404
EarI CTCTTC 1 cut(s) 404
EciI GGCGGA 3 cut(s) 82, 422, 886
Ecl136II GAGCTC 2 cut(s) 427, 550
Eco130I CCWWGG 2 cut(s) 450, 648
Eco24I GRGCYC 2 cut(s) 429, 552
Eco47I GGWCC 4 cut(s) 184, 394, 760, 950
Eco53kI GAGCTC 2 cut(s) 427, 550
Eco57I CTGAAG 1 cut(s) 385
Eco91I GGTNACC 1 cut(s) 574
EcoICRI GAGCTC 2 cut(s) 427, 550
EcoO109I RGGNCCY 2 cut(s) 760, 950
EcoO65I GGTNACC 1 cut(s) 574
EcoRII CCWGG 1 cut(s) 180
EcoT14I CCWWGG 2 cut(s) 450, 648
EcoT38I GRGCYC 2 cut(s) 429, 552
EgeI GGCGCC 3 cut(s) 241, 463, 634
EheI GGCGCC 3 cut(s) 241, 463, 634
ErhI CCWWGG 2 cut(s) 450, 648
FaeI CATG 5 cut(s) 115, 523, 631, 979, 1067
FaiI YATR 7 cut(s) 113, 248, 521, 629, 962, 977, 1065
FalI AAGNNNNNCTT 4 cut(s) 260, 292, 723, 755
FaqI GGGAC 3 cut(s) 425, 773, 936
FatI CATG 5 cut(s) 111, 519, 627, 975, 1063
FauI CCCGC 2 cut(s) 200, 682
Fnu4HI GCNGC 6 cut(s) 96, 542, 663, 776, 869, 995
FokI GGATG 4 cut(s) 305, 575, 813, 921
FriOI GRGCYC 2 cut(s) 429, 552
Fsp4HI GCNGC 6 cut(s) 96, 542, 663, 776, 869, 995
GlaI GCGC 7 cut(s) 241, 370, 448, 463, 624, 634, 993
GluI GCNGC 6 cut(s) 96, 542, 663, 776, 869, 995
HaeII RGCGCY 4 cut(s) 243, 465, 636, 995
HaeIII GGCC 4 cut(s) 455, 884, 974, 1083
HapII CCGG 7 cut(s) 273, 411, 572, 678, 743, 1004, 1019
HgaI GACGC 3 cut(s) 356, 833, 965
HhaI GCGC 7 cut(s) 242, 371, 449, 464, 625, 635, 994
Hin1I GRCGYC 5 cut(s) 240, 348, 462, 633, 825
Hin1II CATG 5 cut(s) 115, 523, 631, 979, 1067
Hin6I GCGC 7 cut(s) 240, 369, 447, 462, 623, 633, 992
HinP1I GCGC 7 cut(s) 240, 369, 447, 462, 623, 633, 992
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HinfI GANTC 3 cut(s) 301, 874, 1036
HpaII CCGG 7 cut(s) 273, 411, 572, 678, 743, 1004, 1019
HphI GGTGA 9 cut(s) 199, 472, 568, 637, 662, 721, 793, 844, 929
Hpy166II GTNNAC 2 cut(s) 490, 852
Hpy188I TCNGA 1 cut(s) 1088
Hpy188III TCNNGA 3 cut(s) 344, 616, 953
Hpy8I GTNNAC 2 cut(s) 490, 852
Hpy99I CGWCG 8 cut(s) 239, 284, 350, 617, 827, 860, 959, 1003
HpyAV CCTTC 5 cut(s) 27, 115, 230, 475, 749
HpyCH4III ACNGT 2 cut(s) 613, 913
HpyCH4IV ACGT 2 cut(s) 525, 848
HpyCH4V TGCA 7 cut(s) 111, 529, 541, 750, 927, 979, 1063
HpyF3I CTNAG 2 cut(s) 256, 325
HpySE526I ACGT 2 cut(s) 525, 848
Hsp92I GRCGYC 5 cut(s) 240, 348, 462, 633, 825
Hsp92II CATG 5 cut(s) 115, 523, 631, 979, 1067
HspAI GCGC 7 cut(s) 240, 369, 447, 462, 623, 633, 992
KasI GGCGCC 3 cut(s) 239, 461, 632
KroI GCCGGC 1 cut(s) 677
KroNI GCCGGC 1 cut(s) 679
Kzo9I GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
LmnI GCTCC 4 cut(s) 424, 432, 574, 772
Lsp1109I GCAGC 2 cut(s) 553, 787
LweI GCATC 1 cut(s) 327
MaeII ACGT 2 cut(s) 525, 848
MaeIII GTNAC 3 cut(s) 478, 574, 1054
MalI GATC 7 cut(s) 293, 620, 686, 821, 842, 864, 1052
MbiI CCGCTC 1 cut(s) 324
MboI GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
MboII GAAGA 8 cut(s) 12, 160, 163, 391, 694, 743, 892, 994
MflI RGATCY 2 cut(s) 291, 862
MhlI GDGCHC 3 cut(s) 429, 552, 834
MluCI AATT 1 cut(s) 80
Mly113I GGCGCC 3 cut(s) 240, 462, 633
MlyI GAGTC 2 cut(s) 295, 868
MroNI GCCGGC 1 cut(s) 677
MslI CAYNNNNRTG 2 cut(s) 524, 593
MspA1I CMGCKG 2 cut(s) 778, 1079
MspI CCGG 7 cut(s) 273, 411, 572, 678, 743, 1004, 1019
MspR9I CCNGG 1 cut(s) 182
Mva1269I GAATGC 1 cut(s) 43
MvaI CCWGG 1 cut(s) 182
MvnI CGCG 2 cut(s) 617, 623
NaeI GCCGGC 1 cut(s) 679
NarI GGCGCC 3 cut(s) 240, 462, 633
NdeII GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
NgoMIV GCCGGC 1 cut(s) 677
NlaIII CATG 5 cut(s) 115, 523, 631, 979, 1067
NlaIV GGNNCC 7 cut(s) 241, 415, 463, 570, 634, 761, 952
NmeAIII GCCGAG 2 cut(s) 294, 853
NmuCI GTSAC 3 cut(s) 478, 574, 1054
NruI TCGCGA 1 cut(s) 617
PcsI WCGNNNNNNNCGW 1 cut(s) 609
PctI GAATGC 1 cut(s) 43
PdiI GCCGGC 1 cut(s) 679
PfeI GAWTC 1 cut(s) 1036
PflFI GACNNNGTC 1 cut(s) 611
PflMI CCANNNNNTGG 1 cut(s) 181
PkrI GCNGC 6 cut(s) 97, 543, 664, 777, 870, 996
Ple19I CGATCG 1 cut(s) 621
PleI GAGTC 2 cut(s) 295, 868
PluTI GGCGCC 3 cut(s) 243, 465, 636
PpsI GAGTC 2 cut(s) 295, 868
PpuMI RGGWCCY 2 cut(s) 760, 950
PshAI GACNNNNGTC 1 cut(s) 305
Psp124BI GAGCTC 2 cut(s) 429, 552
Psp5II RGGWCCY 2 cut(s) 760, 950
Psp6I CCWGG 1 cut(s) 180
PspEI GGTNACC 1 cut(s) 574
PspGI CCWGG 1 cut(s) 180
PspN4I GGNNCC 7 cut(s) 241, 415, 463, 570, 634, 761, 952
PspPI GGNCC 4 cut(s) 184, 394, 760, 950
PspPPI RGGWCCY 2 cut(s) 760, 950
PstNI CAGNNNCTG 1 cut(s) 181
PsuI RGATCY 2 cut(s) 291, 862
PsyI GACNNNGTC 1 cut(s) 611
PvuI CGATCG 1 cut(s) 621
PvuII CAGCTG 2 cut(s) 778, 1079
RgaI GCGATCGC 1 cut(s) 621
RruI TCGCGA 1 cut(s) 617
RseI CAYNNNNRTG 2 cut(s) 524, 593
SacI GAGCTC 2 cut(s) 429, 552
SatI GCNGC 6 cut(s) 96, 542, 663, 776, 869, 995
Sau3AI GATC 7 cut(s) 291, 618, 684, 819, 840, 862, 1050
Sau96I GGNCC 4 cut(s) 184, 394, 760, 950
SchI GAGTC 2 cut(s) 295, 868
ScrFI CCNGG 1 cut(s) 182
SduI GDGCHC 3 cut(s) 429, 552, 834
SfaAI GCGATCGC 1 cut(s) 621
SfaNI GCATC 1 cut(s) 327
SfoI GGCGCC 3 cut(s) 241, 463, 634
SgfI GCGATCGC 1 cut(s) 621
SinI GGWCC 4 cut(s) 184, 394, 760, 950
SmiMI CAYNNNNRTG 2 cut(s) 524, 593
SmlI CTYRAG 1 cut(s) 878
SmoI CTYRAG 1 cut(s) 878
Sse9I AATT 1 cut(s) 80
SspDI GGCGCC 3 cut(s) 239, 461, 632
SstI GAGCTC 2 cut(s) 429, 552
StyD4I CCNGG 1 cut(s) 180
StyI CCWWGG 2 cut(s) 450, 648
TaaI ACNGT 2 cut(s) 613, 913
TaiI ACGT 2 cut(s) 528, 851
TaqI TCGA 3 cut(s) 345, 822, 969
TasI AATT 1 cut(s) 80
TauI GCSGC 4 cut(s) 98, 665, 871, 997
TfiI GAWTC 1 cut(s) 1036
TscAI CASTG 3 cut(s) 204, 589, 892
TseFI GTSAC 3 cut(s) 478, 574, 1054
TseI GCWGC 2 cut(s) 541, 775
Tsp45I GTSAC 3 cut(s) 478, 574, 1054
TspDTI ATGAA 3 cut(s) 22, 536, 737
TspGWI ACGGA 5 cut(s) 223, 466, 475, 499, 873
TspRI CASTG 3 cut(s) 204, 589, 892
Tth111I GACNNNGTC 1 cut(s) 611
Van91I CCANNNNNTGG 1 cut(s) 181
VpaK11BI GGWCC 4 cut(s) 184, 394, 760, 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.