MD05G1280900.v1.1

Endoplasmic reticulum oxidoreductin-1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
41477867 .. 41482682
4816 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1280900.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGGTCGGGGCAAAGGGAAAACCGAGGCGATGGCTTTGGGTCGTCGGTGCGTTGATCGCGGTCTTCGTTGCCGTTGCATTGACTTCCAGAAGTGCTCCGAAGATATCGTTCTTCGGCCGCTCTAACAAGGCTTGTAATTGTTCTCAGGAAACGCACAAGTATAGTGGGATAGTGGAGGATTGTTGTTGTGATTACGAAACCGTAGACCATCTTAACAAGGAAGTTCTGCATCCATCACTCCAAGAGCTCGTCAAAACTCCGTTCTTTCGATATTTCAAGGTTAAGTTATGGTGTGACTGCCCTTTCTGGCCTGATGATGGTATGTGCCGTCTGCGGGACTGCAGTGTATGTGAATGCCCAGATAGTGAGTTCCCCGAGTCGTTCAAGAAGCCCTATCATGGCCTTCCTGTGGATGATCTTATTTGCCAAGAGGGAAAGCCTGAAGCAGCTGTTGACCGTACACTAGATAATAAAGCTTTCAGAGGATGGACAGAAATAGATAATCCCTGGACAAATGACGATGAGACAGACAATGCTGAGATGACATATGTAAATCTTCAACTGAATCCTGAACGATATACCGGCTACACTGGTCCATCTGCTAGAAGGATATGGGATGCTGTCTACGCAGAGAACTGTCCTAAATATCCATCTGAAGAGTTATGCACTGAAGAAAGAATTCTGTACAAGTTGATATCTGGCCTTCATTCCTCCATTTCAGTCCACATAGCTTCTGATTATCTCCTTGATGAAACTACACAGACGTGGGGTCAAAATCTCTCATTGTTGTATGATCGGGTGTTAAGATACCCAGACCGTGTCAGAAACTTGTACTTCACGTATCTCTTCGTTCTCCGAGCAGTGACAAAGGCTGCAGATTACTTGGAACATGCAGAATATGACACTGGAAATCCTACTGAGGACCTGAAGACACAATCCTTGGTGAGACAGCTACTCTATAATCCCAATCTACAAGCTGCATGCCCTGTCCCATTTGACGAAGCTAAGCTGTGGAAAGGCCAACGTGGACCTGAACTAAAGCAGAAAATACAAAAAGAGTTCAGAAACATTAGTGCATTGATGGATTGTGTTGGATGTGAAAAATGTCGACTTTGGGGGAAGCTTCAGGTCCTTGGTTTAGGCACCGCACTTAAAATCCTCTTCTCTGTTGACGGTCAACAAAATACTGTTCAGATTCTGCACTTGCAAAGAAATGAAGTGATTGCCCTGATGAACCTACTCAATCGGCTCTCAGAATCTGTCAAGTTTGTTAATGAAATGGCATCGTCAACTGAAATGCTCGCAGAAGGGCAGATTTCTTCACCCACTGCCCCAAATTGCCCCTTGCAAAGGATGTGGGCGTCAATGTTTACTACACCAGCCCCAAGTTGCCCATTGCAAAGGATGTGGGCATCGTTAAAACCTAGGTAA

Protein Analysis

477

Amino Acids

54.34

Weight (kDa)

6.0

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ERO1 PF04137 76 - 423 5.3e-122 Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1142
AccBSI CCGCTC 1 cut(s) 120
AccI GTMKAC 3 cut(s) 204, 624, 1108
AccII CGCG 1 cut(s) 59
AciI CCGC 4 cut(s) 59, 118, 334, 1146
AcoI YGGCCR 1 cut(s) 115
AcsI RAATTY 1 cut(s) 678
AcuI CTGAAG 5 cut(s) 462, 675, 690, 947, 1109
AcyI GRCGYC 1 cut(s) 1361
AfaI GTAC 3 cut(s) 460, 686, 833
AfiI CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
AgsI TTSAA 3 cut(s) 277, 385, 560
AhdI GACNNNNNGTC 1 cut(s) 768
AjiI CACGTC 1 cut(s) 765
AjnI CCWGG 1 cut(s) 506
AleI CACNNNNGTG 1 cut(s) 763
AluBI AGCT 9 cut(s) 247, 449, 476, 731, 952, 977, 1004, 1009, 1123
AluI AGCT 9 cut(s) 247, 449, 476, 731, 952, 977, 1004, 1009, 1123
Alw21I GWGCWC 2 cut(s) 97, 249
Alw26I GTCTC 2 cut(s) 518, 940
AlwNI CAGNNNCTG 2 cut(s) 1198, 1259
Ama87I CYCGRG 1 cut(s) 374
AoxI GGCC 5 cut(s) 115, 308, 400, 700, 1018
ApeKI GCWGC 3 cut(s) 446, 872, 977
ApoI RAATTY 1 cut(s) 678
Asp700I GAANNNNTTC 1 cut(s) 678
AspA2I CCTAGG 1 cut(s) 1424
AspS9I GGNCC 4 cut(s) 593, 922, 1028, 1129
AsuHPI GGTGA 2 cut(s) 955, 1314
AvaI CYCGRG 1 cut(s) 374
AvaII GGWCC 4 cut(s) 593, 922, 1028, 1129
AvrII CCTAGG 1 cut(s) 1424
BanI GGYRCC 1 cut(s) 1142
BanII GRGCYC 1 cut(s) 249
BbsI GAAGAC 2 cut(s) 55, 935
Bbv12I GWGCWC 2 cut(s) 97, 249
BbvI GCAGC 3 cut(s) 458, 859, 964
BccI CCATC 8 cut(s) 24, 216, 241, 311, 480, 604, 658, 1075
BceAI ACGGC 2 cut(s) 56, 312
BciT130I CCWGG 1 cut(s) 508
BcoDI GTCTC 2 cut(s) 518, 940
BfaI CTAG 3 cut(s) 464, 603, 1425
BfmI CTRYAG 2 cut(s) 340, 873
BisI GCNGC 4 cut(s) 118, 447, 873, 978
BlnI CCTAGG 1 cut(s) 1424
BlpI GCTNAGC 1 cut(s) 1005
BlsI GCNGC 4 cut(s) 119, 448, 874, 979
Bme1390I CCNGG 1 cut(s) 508
Bme18I GGWCC 4 cut(s) 593, 922, 1028, 1129
BmeRI GACNNNNNGTC 1 cut(s) 768
BmeT110I CYCGRG 1 cut(s) 374
BmgBI CACGTC 1 cut(s) 765
BmgT120I GGNCC 4 cut(s) 593, 922, 1028, 1129
BmiI GGNNCC 1 cut(s) 1144
BmrFI CCNGG 1 cut(s) 508
BmsI GCATC 4 cut(s) 238, 607, 1292, 1421
BpiI GAAGAC 2 cut(s) 55, 935
Bpu1102I GCTNAGC 1 cut(s) 1005
BsaAI YACGTR 1 cut(s) 840
BsaHI GRCGYC 1 cut(s) 1361
BsaJI CCNNGG 5 cut(s) 23, 506, 939, 1132, 1424
Bsc4I CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
Bse118I RCCGGY 1 cut(s) 581
Bse1I ACTGG 2 cut(s) 595, 910
Bse3DI GCAATG 1 cut(s) 1394
BseBI CCWGG 1 cut(s) 508
BseDI CCNNGG 5 cut(s) 23, 506, 939, 1132, 1424
BseGI GGATG 7 cut(s) 229, 418, 491, 622, 1100, 1359, 1410
BseLI CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
BseMI GCAATG 1 cut(s) 1394
BseMII CTCAG 4 cut(s) 158, 528, 909, 1266
BseNI ACTGG 2 cut(s) 595, 910
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 3 cut(s) 458, 859, 964
BsgI GTGCAG 1 cut(s) 1184
Bsh1236I CGCG 1 cut(s) 59
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 5 cut(s) 117, 310, 402, 702, 1020
BshNI GGYRCC 1 cut(s) 1142
BsiEI CGRYCG 1 cut(s) 118
BsiHKAI GWGCWC 2 cut(s) 97, 249
BsiHKCI CYCGRG 1 cut(s) 374
BsiSI CCGG 1 cut(s) 582
BslFI GGGAC 2 cut(s) 350, 974
BslI CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
BsmAI GTCTC 2 cut(s) 518, 940
BsmFI GGGAC 2 cut(s) 350, 974
BsmI GAATGC 1 cut(s) 359
BsnI GGCC 5 cut(s) 117, 310, 402, 702, 1020
BsoBI CYCGRG 1 cut(s) 374
Bsp1286I GDGCHC 2 cut(s) 97, 249
Bsp1407I TGTACA 1 cut(s) 684
Bsp143I GATC 3 cut(s) 54, 415, 793
Bsp1720I GCTNAGC 1 cut(s) 1005
BspACI CCGC 4 cut(s) 59, 118, 334, 1146
BspANI GGCC 5 cut(s) 117, 310, 402, 702, 1020
BspCNI CTCAG 4 cut(s) 157, 529, 910, 1265
BspFNI CGCG 1 cut(s) 59
BspLI GGNNCC 1 cut(s) 1144
BspMAI CTGCAG 2 cut(s) 344, 877
BspT107I GGYRCC 1 cut(s) 1142
BsrBI CCGCTC 1 cut(s) 120
BsrDI GCAATG 1 cut(s) 1394
BsrFI RCCGGY 1 cut(s) 581
BsrGI TGTACA 1 cut(s) 684
BsrI ACTGG 2 cut(s) 595, 910
BssAI RCCGGY 1 cut(s) 581
BssECI CCNNGG 5 cut(s) 23, 506, 939, 1132, 1424
BssMI GATC 3 cut(s) 54, 415, 793
BssNI GRCGYC 1 cut(s) 1361
BssT1I CCWWGG 3 cut(s) 939, 1132, 1424
Bst2UI CCWGG 1 cut(s) 508
Bst4CI ACNGT 6 cut(s) 202, 458, 638, 818, 1175, 1189
Bst6I CTCTTC 3 cut(s) 651, 851, 1166
BstACI GRCGYC 1 cut(s) 1361
BstAUI TGTACA 1 cut(s) 684
BstBAI YACGTR 1 cut(s) 840
BstC8I GCNNGC 2 cut(s) 982, 1302
BstDEI CTNAG 5 cut(s) 144, 537, 918, 1005, 1252
BstENI CCTNNNNNAGG 1 cut(s) 1348
BstF5I GGATG 7 cut(s) 229, 418, 491, 622, 1100, 1359, 1410
BstFNI CGCG 1 cut(s) 59
BstKTI GATC 3 cut(s) 57, 418, 796
BstMAI GTCTC 2 cut(s) 518, 940
BstMBI GATC 3 cut(s) 54, 415, 793
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 2 cut(s) 56, 626
BstNI CCWGG 1 cut(s) 508
BstNSI RCATGY 2 cut(s) 893, 984
BstSCI CCNGG 1 cut(s) 506
BstSFI CTRYAG 2 cut(s) 340, 873
BstUI CGCG 1 cut(s) 59
BstV1I GCAGC 3 cut(s) 458, 859, 964
BstV2I GAAGAC 2 cut(s) 55, 935
BstZI CGGCCG 1 cut(s) 115
BsuRI GGCC 5 cut(s) 117, 310, 402, 702, 1020
BtgZI GCGATG 1 cut(s) 43
BtrI CACGTC 1 cut(s) 765
BtsCI GGATG 7 cut(s) 229, 418, 491, 622, 1100, 1359, 1410
BtsI GCAGTG 3 cut(s) 349, 867, 1326
BtsIMutI CAGTG 6 cut(s) 349, 588, 666, 867, 903, 1326
Cac8I GCNNGC 2 cut(s) 982, 1302
CaiI CAGNNNCTG 2 cut(s) 1198, 1259
Cfr10I RCCGGY 1 cut(s) 581
Cfr13I GGNCC 4 cut(s) 593, 922, 1028, 1129
CseI GACGC 1 cut(s) 1350
Csp6I GTAC 3 cut(s) 459, 685, 832
CspCI CAANNNNNGTGG 6 cut(s) 145, 180, 1337, 1372, 1388, 1423
CviAII CATG 3 cut(s) 398, 890, 981
CviQI GTAC 3 cut(s) 459, 685, 832
DdeI CTNAG 5 cut(s) 144, 537, 918, 1005, 1252
DpnI GATC 3 cut(s) 56, 417, 795
DpnII GATC 3 cut(s) 54, 415, 793
DriI GACNNNNNGTC 1 cut(s) 768
EaeI YGGCCR 1 cut(s) 115
EagI CGGCCG 1 cut(s) 115
Eam1104I CTCTTC 3 cut(s) 651, 851, 1166
Eam1105I GACNNNNNGTC 1 cut(s) 768
EarI CTCTTC 3 cut(s) 651, 851, 1166
Ecl136II GAGCTC 1 cut(s) 247
EclXI CGGCCG 1 cut(s) 115
Eco130I CCWWGG 3 cut(s) 939, 1132, 1424
Eco24I GRGCYC 1 cut(s) 249
Eco32I GATATC 2 cut(s) 105, 696
Eco47I GGWCC 4 cut(s) 593, 922, 1028, 1129
Eco52I CGGCCG 1 cut(s) 115
Eco53kI GAGCTC 1 cut(s) 247
Eco57I CTGAAG 5 cut(s) 462, 675, 690, 947, 1109
Eco88I CYCGRG 1 cut(s) 374
EcoICRI GAGCTC 1 cut(s) 247
EcoNI CCTNNNNNAGG 1 cut(s) 1348
EcoO109I RGGNCCY 2 cut(s) 922, 1129
EcoRI GAATTC 1 cut(s) 678
EcoRII CCWGG 1 cut(s) 506
EcoRV GATATC 2 cut(s) 105, 696
EcoT14I CCWWGG 3 cut(s) 939, 1132, 1424
EcoT38I GRGCYC 1 cut(s) 249
ErhI CCWWGG 3 cut(s) 939, 1132, 1424
FaeI CATG 3 cut(s) 401, 893, 984
FaqI GGGAC 2 cut(s) 350, 974
FatI CATG 3 cut(s) 397, 889, 980
FauI CCCGC 1 cut(s) 327
FauNDI CATATG 1 cut(s) 547
FblI GTMKAC 3 cut(s) 204, 624, 1108
Fnu4HI GCNGC 4 cut(s) 118, 447, 873, 978
FokI GGATG 7 cut(s) 216, 425, 498, 629, 1107, 1366, 1417
FriOI GRGCYC 1 cut(s) 249
Fsp4HI GCNGC 4 cut(s) 118, 447, 873, 978
FspBI CTAG 3 cut(s) 464, 603, 1425
GluI GCNGC 4 cut(s) 118, 447, 873, 978
HaeIII GGCC 5 cut(s) 117, 310, 402, 702, 1020
HapII CCGG 1 cut(s) 582
HgaI GACGC 1 cut(s) 1350
Hin1I GRCGYC 1 cut(s) 1361
Hin1II CATG 3 cut(s) 401, 893, 984
HincII GTYRAC 5 cut(s) 454, 1109, 1171, 1178, 1290
HindII GTYRAC 5 cut(s) 454, 1109, 1171, 1178, 1290
HindIII AAGCTT 2 cut(s) 474, 1121
HinfI GANTC 4 cut(s) 377, 565, 1195, 1256
HpaII CCGG 1 cut(s) 582
HphI GGTGA 2 cut(s) 955, 1314
Hpy188I TCNGA 9 cut(s) 99, 482, 655, 736, 824, 857, 1064, 1194, 1255
Hpy188III TCNNGA 4 cut(s) 87, 146, 385, 569
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 4 cut(s) 413, 600, 713, 1301
HpyCH4III ACNGT 6 cut(s) 202, 458, 638, 818, 1175, 1189
HpyCH4IV ACGT 3 cut(s) 764, 839, 1024
HpyF10VI GCNNNNNNNGC 2 cut(s) 56, 626
HpyF3I CTNAG 5 cut(s) 144, 537, 918, 1005, 1252
HpySE526I ACGT 3 cut(s) 764, 839, 1024
Hsp92I GRCGYC 1 cut(s) 1361
Hsp92II CATG 3 cut(s) 401, 893, 984
Kzo9I GATC 3 cut(s) 54, 415, 793
LmnI GCTCC 1 cut(s) 100
Lsp1109I GCAGC 3 cut(s) 458, 859, 964
LweI GCATC 4 cut(s) 238, 607, 1292, 1421
MaeI CTAG 3 cut(s) 464, 603, 1425
MaeII ACGT 3 cut(s) 764, 839, 1024
MaeIII GTNAC 2 cut(s) 293, 862
MalI GATC 3 cut(s) 56, 417, 795
MbiI CCGCTC 1 cut(s) 120
MboI GATC 3 cut(s) 54, 415, 793
MhlI GDGCHC 2 cut(s) 97, 249
MluCI AATT 3 cut(s) 136, 678, 1336
MlyI GAGTC 1 cut(s) 386
MmeI TCCRAC 1 cut(s) 1072
MnlI CCTC 7 cut(s) 18, 169, 424, 476, 721, 913, 1169
MroXI GAANNNNTTC 1 cut(s) 678
MseI TTAA 6 cut(s) 213, 282, 803, 1152, 1272, 1418
MslI CAYNNNNRTG 1 cut(s) 763
MspA1I CMGCKG 1 cut(s) 449
MspI CCGG 1 cut(s) 582
MspR9I CCNGG 1 cut(s) 508
Mva1269I GAATGC 1 cut(s) 359
MvaI CCWGG 1 cut(s) 508
MvnI CGCG 1 cut(s) 59
MwoI GCNNNNNNNGC 2 cut(s) 56, 626
NdeI CATATG 1 cut(s) 547
NdeII GATC 3 cut(s) 54, 415, 793
NlaIII CATG 3 cut(s) 401, 893, 984
NlaIV GGNNCC 1 cut(s) 1144
NmuCI GTSAC 2 cut(s) 293, 862
NspI RCATGY 2 cut(s) 893, 984
OliI CACNNNNGTG 1 cut(s) 763
PaeI GCATGC 1 cut(s) 984
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 1 cut(s) 359
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 3 cut(s) 565, 1195, 1256
PflFI GACNNNGTC 1 cut(s) 818
PkrI GCNGC 4 cut(s) 119, 448, 874, 979
PleI GAGTC 1 cut(s) 385
PpsI GAGTC 1 cut(s) 385
Ppu21I YACGTR 1 cut(s) 840
PpuMI RGGWCCY 2 cut(s) 922, 1129
Psp124BI GAGCTC 1 cut(s) 249
Psp5II RGGWCCY 2 cut(s) 922, 1129
Psp6I CCWGG 1 cut(s) 506
PspGI CCWGG 1 cut(s) 506
PspN4I GGNNCC 1 cut(s) 1144
PspPI GGNCC 4 cut(s) 593, 922, 1028, 1129
PspPPI RGGWCCY 2 cut(s) 922, 1129
PstI CTGCAG 2 cut(s) 344, 877
PstNI CAGNNNCTG 2 cut(s) 1198, 1259
PsyI GACNNNGTC 1 cut(s) 818
PvuII CAGCTG 1 cut(s) 449
RsaI GTAC 3 cut(s) 460, 686, 833
RsaNI GTAC 3 cut(s) 459, 685, 832
RseI CAYNNNNRTG 1 cut(s) 763
SacI GAGCTC 1 cut(s) 249
SalI GTCGAC 1 cut(s) 1107
SaqAI TTAA 6 cut(s) 213, 282, 803, 1152, 1272, 1418
SatI GCNGC 4 cut(s) 118, 447, 873, 978
Sau3AI GATC 3 cut(s) 54, 415, 793
Sau96I GGNCC 4 cut(s) 593, 922, 1028, 1129
SchI GAGTC 1 cut(s) 386
ScrFI CCNGG 1 cut(s) 508
SduI GDGCHC 2 cut(s) 97, 249
SfaNI GCATC 4 cut(s) 238, 607, 1292, 1421
SfcI CTRYAG 2 cut(s) 340, 873
SinI GGWCC 4 cut(s) 593, 922, 1028, 1129
SmiMI CAYNNNNRTG 1 cut(s) 763
SphI GCATGC 1 cut(s) 984
Sse9I AATT 3 cut(s) 136, 678, 1336
SsiI CCGC 4 cut(s) 59, 118, 334, 1146
SspMI CTAG 3 cut(s) 464, 603, 1425
SstI GAGCTC 1 cut(s) 249
StyD4I CCNGG 1 cut(s) 506
StyI CCWWGG 3 cut(s) 939, 1132, 1424
TaaI ACNGT 6 cut(s) 202, 458, 638, 818, 1175, 1189
TaiI ACGT 3 cut(s) 767, 842, 1027
TaqI TCGA 2 cut(s) 268, 1108
TasI AATT 3 cut(s) 136, 678, 1336
TatI WGTACW 2 cut(s) 684, 831
TauI GCSGC 1 cut(s) 120
TfiI GAWTC 3 cut(s) 565, 1195, 1256
Tru1I TTAA 6 cut(s) 213, 282, 803, 1152, 1272, 1418
Tru9I TTAA 6 cut(s) 213, 282, 803, 1152, 1272, 1418
TscAI CASTG 6 cut(s) 349, 595, 673, 867, 910, 1333
TseFI GTSAC 2 cut(s) 293, 862
TseI GCWGC 3 cut(s) 446, 872, 977
Tsp45I GTSAC 2 cut(s) 293, 862
TspDTI ATGAA 5 cut(s) 695, 765, 1230, 1247, 1290
TspGWI ACGGA 1 cut(s) 249
TspRI CASTG 6 cut(s) 349, 595, 673, 867, 910, 1333
Tth111I GACNNNGTC 1 cut(s) 818
VpaK11BI GGWCC 4 cut(s) 593, 922, 1028, 1129
XagI CCTNNNNNAGG 1 cut(s) 1348
XapI RAATTY 1 cut(s) 678
XceI RCATGY 2 cut(s) 893, 984
XmaJI CCTAGG 1 cut(s) 1424
XmiI GTMKAC 3 cut(s) 204, 624, 1108
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 3 cut(s) 464, 603, 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.