MD10G1259300.v1.1

Endoplasmic reticulum oxidoreductin-1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
35330530 .. 35334675
4146 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1259300.v1.1.491

Sequence Viewer

Length: 1533 bp
ATGGTTGGGGCGAAGGGAAAACCGAGGCGATGGGTTTGGGTCGTCGGGGCGGTGATCGCCGTCTTCGTTGCCGTCGCCATGACATCCGTGCGTGCTCCGAAGATATCGTTCTTTGGACGGTCTAACAAGGTTTGCAATTGTACTCAGGAAACGCATAAGTATAGTGGGATAGTGGAGGATTGTTGTTGTGATTACGAGACCGCAGACCATCTTAACAAGGAAGTTCTGCATCCATCACTACAAGAACTTGTCAAAACACCGTTCTTCCGGTATTTCAAGGTTAAGTTATGGTGCGACTGCCCTTTCTGGCCTGATGATGGTATGTGCCGTCTGCGGGATTGCAGTGTATGCGAATGCCCAGATAGTGAGTTCCCCGAGTCATTCAAGAAACCCTATCATGGCCTTCCAGTGGATGATCTTGTTTGTCAGGAGGGAAAGCCTGAAGCAGCTGTTGATCGTACACTAGATAATAAAGCTTTCAGAGGATGGACAGAAATAGATAATCCCTGGACAAATGACGATGAGACAGACAATGCTGAGATGACATATGTGAATCTTCAACTGAATCCTGAACGATATACCGGCTACACTGGTCCATCTGCTAGAAGGATATGGGATGCTGTCTACGCAGAGAACTGTCCTAAATATCCATCTGAAGAGTTATGCGCTGAAGAAAGAATTCTGTACAAGTTGATATCTGGTCTTCATTCCTCTATTTCAGTCCACATAGCTTCCGATTATCTCCTTGATGAAACTACACAGACGTGGGGTCCAAATCTCTCATTGTTGTATGATCGGGTCCTAAGATACCCAGACCGTGTCAGAAACTTGTACTTCACGTATCTCTTCGTTCTCCGAGCAGTGACAAAGGCTGCAGATTACTTGGAACATGCTGAATATGACACTGGTAATCCTACTGAGGATCTGAAGACACAATCCTTGGTGAGACAGCTACTCTATAATCCCAATCTACAAGCTGCTTGCCCTGTCCCATTTGATGAAGCTAAGCTGTGGAAAGGCCAGCGTGGACCTGAACTAAAGCAGAAAATACAGAAACAGTTCAGAAACATTAGTGCATTGATGGATTGTGTCGGATGCGAAAAATGTCGACTTTGGGGGAAGCTTCAGGTCCTTGGTCTTGGCACCGCACTTAAAATCCTCTTCTCCGTTGACGGTCAACAAAACGCTGTTCAAACTCTGCACCTGCAAAGGAATGAGGTGATTGCCTTGATGAACCTACTAAATCGGCTCTCAGAATCCGTCAAGTTTGTTAATGAAAAGGGATCATCAACCGAAATGCTCGCAGAAGGGCAGGTTTCTTCACCCACCACCCCAAATTGCCCCTTGCAAAGGATGTGGGCGTCAATGTTTAATACACCAGCCCCAAGTTGCCCATTGCGAAGGATGTGGGCGTCAATGCTTAATACACCAGCCCCAAGTTGCCCGTTGCAAAGGATGTGGGGGTCAATATTTAAAACACCAGCCCCAAGTTGCCCATTGCAAAGGATTTGGGCATCGTTAAAACCTAGGTAG

Protein Analysis

511

Amino Acids

58.04

Weight (kDa)

7.39

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ERO1 PF04137 76 - 423 2.5e-122 Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1212
Acc36I ACCTGC 2 cut(s) 1212, 1303
AccB1I GGYRCC 1 cut(s) 1142
AccI GTMKAC 2 cut(s) 624, 1108
AciI CCGC 4 cut(s) 50, 201, 334, 1146
AclWI GGATC 2 cut(s) 930, 1291
AcsI RAATTY 1 cut(s) 678
AcuI CTGAAG 5 cut(s) 462, 675, 690, 947, 1109
AcyI GRCGYC 2 cut(s) 1361, 1412
AfaI GTAC 4 cut(s) 142, 460, 686, 833
AfiI CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
AgsI TTSAA 4 cut(s) 277, 385, 560, 1193
AhdI GACNNNNNGTC 1 cut(s) 768
AjiI CACGTC 1 cut(s) 765
AjnI CCWGG 1 cut(s) 506
AleI CACNNNNGTG 1 cut(s) 763
AluBI AGCT 8 cut(s) 449, 476, 731, 952, 977, 1004, 1009, 1123
AluI AGCT 8 cut(s) 449, 476, 731, 952, 977, 1004, 1009, 1123
Alw21I GWGCWC 1 cut(s) 97
Alw26I GTCTC 3 cut(s) 191, 518, 940
AlwI GGATC 2 cut(s) 930, 1291
Ama87I CYCGRG 1 cut(s) 374
AoxI GGCC 3 cut(s) 308, 400, 1018
ApeKI GCWGC 3 cut(s) 446, 872, 977
ApoI RAATTY 1 cut(s) 678
Asp700I GAANNNNTTC 2 cut(s) 678, 1058
AspA2I CCTAGG 1 cut(s) 1526
AspLEI GCGC 1 cut(s) 668
AspS9I GGNCC 5 cut(s) 593, 770, 799, 1028, 1129
AsuHPI GGTGA 4 cut(s) 64, 955, 1231, 1314
AvaI CYCGRG 1 cut(s) 374
AvaII GGWCC 5 cut(s) 593, 770, 799, 1028, 1129
AvrII CCTAGG 1 cut(s) 1526
BanI GGYRCC 1 cut(s) 1142
BbsI GAAGAC 3 cut(s) 55, 695, 935
Bbv12I GWGCWC 1 cut(s) 97
BbvI GCAGC 3 cut(s) 458, 859, 964
BccI CCATC 8 cut(s) 24, 216, 241, 311, 480, 604, 658, 1075
BceAI ACGGC 3 cut(s) 44, 56, 312
BciT130I CCWGG 1 cut(s) 508
BcoDI GTCTC 3 cut(s) 191, 518, 940
BfaI CTAG 3 cut(s) 464, 603, 1527
BfmI CTRYAG 1 cut(s) 873
BfuAI ACCTGC 2 cut(s) 1212, 1303
BisI GCNGC 3 cut(s) 447, 873, 978
BlnI CCTAGG 1 cut(s) 1526
BlpI GCTNAGC 1 cut(s) 1005
BlsI GCNGC 3 cut(s) 448, 874, 979
Bme1390I CCNGG 1 cut(s) 508
Bme18I GGWCC 5 cut(s) 593, 770, 799, 1028, 1129
BmeRI GACNNNNNGTC 1 cut(s) 768
BmeT110I CYCGRG 1 cut(s) 374
BmgBI CACGTC 1 cut(s) 765
BmgT120I GGNCC 5 cut(s) 593, 770, 799, 1028, 1129
BmiI GGNNCC 3 cut(s) 771, 800, 1144
BmrFI CCNGG 1 cut(s) 508
BmsI GCATC 4 cut(s) 238, 607, 1085, 1523
BpiI GAAGAC 3 cut(s) 55, 695, 935
Bpu1102I GCTNAGC 1 cut(s) 1005
BsaAI YACGTR 1 cut(s) 840
BsaHI GRCGYC 2 cut(s) 1361, 1412
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 5 cut(s) 23, 506, 939, 1132, 1526
BsaWI WCCGGW 1 cut(s) 267
Bsc4I CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
Bse118I RCCGGY 1 cut(s) 581
Bse1I ACTGG 3 cut(s) 407, 595, 910
Bse3DI GCAATG 2 cut(s) 1394, 1496
BseBI CCWGG 1 cut(s) 508
BseDI CCNNGG 5 cut(s) 23, 506, 939, 1132, 1526
BseGI GGATG 9 cut(s) 83, 229, 418, 491, 622, 1100, 1359, 1410, 1461
BseLI CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
BseMI GCAATG 2 cut(s) 1394, 1496
BseMII CTCAG 4 cut(s) 158, 528, 909, 1266
BseNI ACTGG 3 cut(s) 407, 595, 910
BseXI GCAGC 3 cut(s) 458, 859, 964
BsgI GTGCAG 1 cut(s) 1184
BshFI GGCC 3 cut(s) 310, 402, 1020
BshNI GGYRCC 1 cut(s) 1142
BsiHKAI GWGCWC 1 cut(s) 97
BsiHKCI CYCGRG 1 cut(s) 374
BsiSI CCGG 2 cut(s) 268, 582
BslFI GGGAC 1 cut(s) 974
BslI CCNNNNNNNGG 5 cut(s) 317, 334, 398, 409, 1350
BsmAI GTCTC 3 cut(s) 191, 518, 940
BsmFI GGGAC 1 cut(s) 974
BsmI GAATGC 1 cut(s) 359
BsnI GGCC 3 cut(s) 310, 402, 1020
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 1 cut(s) 374
Bsp1286I GDGCHC 1 cut(s) 97
Bsp1407I TGTACA 1 cut(s) 684
Bsp143I GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
Bsp1720I GCTNAGC 1 cut(s) 1005
BspACI CCGC 4 cut(s) 50, 201, 334, 1146
BspANI GGCC 3 cut(s) 310, 402, 1020
BspCNI CTCAG 4 cut(s) 157, 529, 910, 1265
BspLI GGNNCC 3 cut(s) 771, 800, 1144
BspMAI CTGCAG 1 cut(s) 877
BspMI ACCTGC 2 cut(s) 1212, 1303
BspPI GGATC 2 cut(s) 930, 1291
BspT107I GGYRCC 1 cut(s) 1142
BspTNI GGTCTC 1 cut(s) 191
BsrDI GCAATG 2 cut(s) 1394, 1496
BsrFI RCCGGY 1 cut(s) 581
BsrGI TGTACA 1 cut(s) 684
BsrI ACTGG 3 cut(s) 407, 595, 910
BssAI RCCGGY 1 cut(s) 581
BssECI CCNNGG 5 cut(s) 23, 506, 939, 1132, 1526
BssMI GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
BssNI GRCGYC 2 cut(s) 1361, 1412
BssT1I CCWWGG 3 cut(s) 939, 1132, 1526
Bst2UI CCWGG 1 cut(s) 508
Bst4CI ACNGT 6 cut(s) 120, 261, 638, 818, 1059, 1175
Bst6I CTCTTC 3 cut(s) 651, 851, 1166
BstACI GRCGYC 2 cut(s) 1361, 1412
BstAPI GCANNNNNTGC 1 cut(s) 348
BstAUI TGTACA 1 cut(s) 684
BstBAI YACGTR 1 cut(s) 840
BstC8I GCNNGC 4 cut(s) 93, 982, 1022, 1302
BstDEI CTNAG 6 cut(s) 144, 537, 803, 918, 1005, 1252
BstENI CCTNNNNNAGG 1 cut(s) 1348
BstF5I GGATG 9 cut(s) 83, 229, 418, 491, 622, 1100, 1359, 1410, 1461
BstHHI GCGC 1 cut(s) 668
BstKTI GATC 6 cut(s) 57, 418, 457, 796, 925, 1286
BstMAI GTCTC 3 cut(s) 191, 518, 940
BstMBI GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
BstMWI GCNNNNNNNGC 3 cut(s) 56, 348, 626
BstNI CCWGG 1 cut(s) 508
BstNSI RCATGY 1 cut(s) 893
BstSCI CCNGG 1 cut(s) 506
BstSFI CTRYAG 1 cut(s) 873
BstV1I GCAGC 3 cut(s) 458, 859, 964
BstV2I GAAGAC 3 cut(s) 55, 695, 935
BstX2I RGATCY 1 cut(s) 922
BstYI RGATCY 1 cut(s) 922
BsuRI GGCC 3 cut(s) 310, 402, 1020
BtgZI GCGATG 1 cut(s) 43
BtrI CACGTC 1 cut(s) 765
BtsCI GGATG 9 cut(s) 83, 229, 418, 491, 622, 1100, 1359, 1410, 1461
BtsI GCAGTG 2 cut(s) 349, 867
BtsIMutI CAGTG 5 cut(s) 349, 414, 588, 867, 903
BveI ACCTGC 2 cut(s) 1212, 1303
Cac8I GCNNGC 4 cut(s) 93, 982, 1022, 1302
CfoI GCGC 1 cut(s) 668
Cfr10I RCCGGY 1 cut(s) 581
Cfr13I GGNCC 5 cut(s) 593, 770, 799, 1028, 1129
CseI GACGC 2 cut(s) 1350, 1401
Csp6I GTAC 4 cut(s) 141, 459, 685, 832
CspCI CAANNNNNGTGG 4 cut(s) 1337, 1372, 1439, 1474
CviAII CATG 3 cut(s) 79, 398, 890
CviQI GTAC 4 cut(s) 141, 459, 685, 832
DdeI CTNAG 6 cut(s) 144, 537, 803, 918, 1005, 1252
DpnI GATC 6 cut(s) 56, 417, 456, 795, 924, 1285
DpnII GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
DraI TTTAAA 1 cut(s) 1474
DriI GACNNNNNGTC 1 cut(s) 768
Eam1104I CTCTTC 3 cut(s) 651, 851, 1166
Eam1105I GACNNNNNGTC 1 cut(s) 768
EarI CTCTTC 3 cut(s) 651, 851, 1166
Eco130I CCWWGG 3 cut(s) 939, 1132, 1526
Eco31I GGTCTC 1 cut(s) 191
Eco32I GATATC 2 cut(s) 105, 696
Eco47I GGWCC 5 cut(s) 593, 770, 799, 1028, 1129
Eco57I CTGAAG 5 cut(s) 462, 675, 690, 947, 1109
Eco88I CYCGRG 1 cut(s) 374
EcoNI CCTNNNNNAGG 1 cut(s) 1348
EcoO109I RGGNCCY 2 cut(s) 799, 1129
EcoRI GAATTC 1 cut(s) 678
EcoRII CCWGG 1 cut(s) 506
EcoRV GATATC 2 cut(s) 105, 696
EcoT14I CCWWGG 3 cut(s) 939, 1132, 1526
ErhI CCWWGG 3 cut(s) 939, 1132, 1526
FaeI CATG 3 cut(s) 82, 401, 893
FaqI GGGAC 1 cut(s) 974
FatI CATG 3 cut(s) 78, 397, 889
FauI CCCGC 1 cut(s) 327
FauNDI CATATG 1 cut(s) 547
FblI GTMKAC 2 cut(s) 624, 1108
Fnu4HI GCNGC 3 cut(s) 447, 873, 978
FokI GGATG 9 cut(s) 70, 216, 425, 498, 629, 1107, 1366, 1417, 1468
Fsp4HI GCNGC 3 cut(s) 447, 873, 978
FspBI CTAG 3 cut(s) 464, 603, 1527
GlaI GCGC 1 cut(s) 667
GluI GCNGC 3 cut(s) 447, 873, 978
HaeIII GGCC 3 cut(s) 310, 402, 1020
HapII CCGG 2 cut(s) 268, 582
HgaI GACGC 2 cut(s) 1350, 1401
HhaI GCGC 1 cut(s) 668
Hin1I GRCGYC 2 cut(s) 1361, 1412
Hin1II CATG 3 cut(s) 82, 401, 893
Hin6I GCGC 1 cut(s) 666
HinP1I GCGC 1 cut(s) 666
HincII GTYRAC 3 cut(s) 1109, 1171, 1178
HindII GTYRAC 3 cut(s) 1109, 1171, 1178
HindIII AAGCTT 2 cut(s) 474, 1121
HinfI GANTC 4 cut(s) 377, 553, 565, 1256
HpaII CCGG 2 cut(s) 268, 582
HphI GGTGA 4 cut(s) 64, 955, 1231, 1314
Hpy166II GTNNAC 7 cut(s) 461, 625, 724, 1028, 1109, 1171, 1178
Hpy188III TCNNGA 4 cut(s) 146, 385, 428, 569
Hpy8I GTNNAC 7 cut(s) 461, 625, 724, 1028, 1109, 1171, 1178
Hpy99I CGWCG 2 cut(s) 47, 77
HpyAV CCTTC 5 cut(s) 7, 413, 600, 1301, 1395
HpyCH4III ACNGT 6 cut(s) 120, 261, 638, 818, 1059, 1175
HpyCH4IV ACGT 2 cut(s) 764, 839
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 348, 626
HpyF3I CTNAG 6 cut(s) 144, 537, 803, 918, 1005, 1252
HpySE526I ACGT 2 cut(s) 764, 839
Hsp92I GRCGYC 2 cut(s) 1361, 1412
Hsp92II CATG 3 cut(s) 82, 401, 893
HspAI GCGC 1 cut(s) 666
Kzo9I GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
LmnI GCTCC 1 cut(s) 100
Lsp1109I GCAGC 3 cut(s) 458, 859, 964
LweI GCATC 4 cut(s) 238, 607, 1085, 1523
MaeI CTAG 3 cut(s) 464, 603, 1527
MaeII ACGT 2 cut(s) 764, 839
MaeIII GTNAC 1 cut(s) 862
MalI GATC 6 cut(s) 56, 417, 456, 795, 924, 1285
MboI GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
MfeI CAATTG 1 cut(s) 136
MflI RGATCY 1 cut(s) 922
MhlI GDGCHC 1 cut(s) 97
MluCI AATT 3 cut(s) 136, 678, 1336
MlyI GAGTC 1 cut(s) 386
MmeI TCCRAC 1 cut(s) 1072
MnlI CCTC 8 cut(s) 18, 169, 424, 476, 721, 913, 1169, 1210
MroXI GAANNNNTTC 2 cut(s) 678, 1058
MseI TTAA 8 cut(s) 213, 282, 1152, 1272, 1371, 1422, 1473, 1520
MslI CAYNNNNRTG 1 cut(s) 763
MspA1I CMGCKG 1 cut(s) 449
MspI CCGG 2 cut(s) 268, 582
MspR9I CCNGG 1 cut(s) 508
MunI CAATTG 1 cut(s) 136
Mva1269I GAATGC 1 cut(s) 359
MvaI CCWGG 1 cut(s) 508
MwoI GCNNNNNNNGC 3 cut(s) 56, 348, 626
NdeI CATATG 1 cut(s) 547
NdeII GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
NlaIII CATG 3 cut(s) 82, 401, 893
NlaIV GGNNCC 3 cut(s) 771, 800, 1144
NmuCI GTSAC 1 cut(s) 862
NspI RCATGY 1 cut(s) 893
OliI CACNNNNGTG 1 cut(s) 763
PaqCI CACCTGC 1 cut(s) 1212
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 1 cut(s) 359
PdmI GAANNNNTTC 2 cut(s) 678, 1058
PfeI GAWTC 3 cut(s) 553, 565, 1256
PflFI GACNNNGTC 1 cut(s) 818
PkrI GCNGC 3 cut(s) 448, 874, 979
PleI GAGTC 1 cut(s) 385
PpsI GAGTC 1 cut(s) 385
Ppu21I YACGTR 1 cut(s) 840
PpuMI RGGWCCY 2 cut(s) 799, 1129
Psp5II RGGWCCY 2 cut(s) 799, 1129
Psp6I CCWGG 1 cut(s) 506
PspGI CCWGG 1 cut(s) 506
PspN4I GGNNCC 3 cut(s) 771, 800, 1144
PspPI GGNCC 5 cut(s) 593, 770, 799, 1028, 1129
PspPPI RGGWCCY 2 cut(s) 799, 1129
PstI CTGCAG 1 cut(s) 877
PsuI RGATCY 1 cut(s) 922
PsyI GACNNNGTC 1 cut(s) 818
PvuII CAGCTG 1 cut(s) 449
RsaI GTAC 4 cut(s) 142, 460, 686, 833
RsaNI GTAC 4 cut(s) 141, 459, 685, 832
RseI CAYNNNNRTG 1 cut(s) 763
SalI GTCGAC 1 cut(s) 1107
SaqAI TTAA 8 cut(s) 213, 282, 1152, 1272, 1371, 1422, 1473, 1520
SatI GCNGC 3 cut(s) 447, 873, 978
Sau3AI GATC 6 cut(s) 54, 415, 454, 793, 922, 1283
Sau96I GGNCC 5 cut(s) 593, 770, 799, 1028, 1129
SchI GAGTC 1 cut(s) 386
ScrFI CCNGG 1 cut(s) 508
SduI GDGCHC 1 cut(s) 97
SfaNI GCATC 4 cut(s) 238, 607, 1085, 1523
SfcI CTRYAG 1 cut(s) 873
SinI GGWCC 5 cut(s) 593, 770, 799, 1028, 1129
SmiMI CAYNNNNRTG 1 cut(s) 763
Sse9I AATT 3 cut(s) 136, 678, 1336
SsiI CCGC 4 cut(s) 50, 201, 334, 1146
SspI AATATT 1 cut(s) 1470
SspMI CTAG 3 cut(s) 464, 603, 1527
StyD4I CCNGG 1 cut(s) 506
StyI CCWWGG 3 cut(s) 939, 1132, 1526
TaaI ACNGT 6 cut(s) 120, 261, 638, 818, 1059, 1175
TaiI ACGT 2 cut(s) 767, 842
TaqI TCGA 1 cut(s) 1108
TasI AATT 3 cut(s) 136, 678, 1336
TatI WGTACW 3 cut(s) 140, 684, 831
TfiI GAWTC 3 cut(s) 553, 565, 1256
Tru1I TTAA 8 cut(s) 213, 282, 1152, 1272, 1371, 1422, 1473, 1520
Tru9I TTAA 8 cut(s) 213, 282, 1152, 1272, 1371, 1422, 1473, 1520
TscAI CASTG 5 cut(s) 349, 414, 595, 867, 910
TseFI GTSAC 1 cut(s) 862
TseI GCWGC 3 cut(s) 446, 872, 977
Tsp45I GTSAC 1 cut(s) 862
TspDTI ATGAA 5 cut(s) 695, 765, 1014, 1247, 1290
TspGWI ACGGA 3 cut(s) 76, 1156, 1249
TspRI CASTG 5 cut(s) 349, 414, 595, 867, 910
Tth111I GACNNNGTC 1 cut(s) 818
VpaK11BI GGWCC 5 cut(s) 593, 770, 799, 1028, 1129
XagI CCTNNNNNAGG 1 cut(s) 1348
XapI RAATTY 1 cut(s) 678
XceI RCATGY 1 cut(s) 893
XmaJI CCTAGG 1 cut(s) 1526
XmiI GTMKAC 2 cut(s) 624, 1108
XmnI GAANNNNTTC 2 cut(s) 678, 1058
XspI CTAG 3 cut(s) 464, 603, 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.