Prupe.4G084000_v2.0.a1

Endoplasmic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
4109923 .. 4114527
4605 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G084000.2

Sequence Viewer

Length: 1365 bp
ATGGCTGGGGAAAAGGGTAAAACAAAGCGATGGGGTTGGGCCGTCGGAGCGCTGATCGCTGTCTTTGTTGCCGTGGCCATGACATCGAGAACTGCTCCTAAAATCTCATTCTTCGGACGCTCTAATAAGCCTTGTAACTGTACTCAGGAAACACATAAGTATAGTGGGATAGTGGAGGATTGTTGTTGTGATTATGAGACCGTGGACCATATTAACAAGGAAGTTTTGCATCCATCACTCCAAGAGCTCGTTAAAACTCCGTTCTTTCGGTATTTCAAGGTTAAGTTATGGTGCGACTGCCCTTTCTGGCCTGACGATGGTATGTGCCGTCTGCGAGATTGTAGTGTATGTGAATGCCCAGATAGTGAGTTCCCAGAATCATTCAAGAAGCCCCATCATGGCCTTCCATTAGATGATCTTGTTTGTCAAGAGGGAAAGCCTGAAGCAGCTGTTGACCGTACACTAGATAAAAAGGCATTCAGAGGCTGGACAGAAATAGACAATCCCTGGACGAATGACGATGAGACAGACAATGCTGAGATGACATATGTGAATCTTCAACTGAATCCTGAACGGTATACCGGCTACACTGGTCCATCAGCTAGAAGGATATGGGATGCTGTCTACGCAGAGAACTGTCCCAAATATCCATCTGAAGAGTTATGCGCTGAAGAAAGAATTCTGTACAAGTTGATATCTGGTCTTCATTCCTCTATTTCAGTCCACATAGCTTCTGATTATCTCCTTGATGAAACTACACAAATGTGGGGTTCAAATCTCCCATTGATGTATGATCGGGTCCTAAGATACCCAGATCGTGTCAGAAACTTGTACTTCACGTTTCTCTTTGTTCTCCGAGCCGTGACAAAGGCTGCAGATTACTTGGAACATGCTGAATATGACACTGGTAATCTTAATGAGGATCTGAAGACGCAATCCTTGGTCCGACAGCTACTCTATAATCCCAATCTACAAGCTGCATGCCCAGTCCCATTTGACGAAGCTAAGTTGTGGAAAGGACAACGTGGACCTGAACTGAAGCAGAAAATACAAAATCACGCACTGATGGATTGTGTCGGATGTGAGAAATGTCGACTTTGGGGGAAGCTTCAGGTCCTTGGTCTTGGCACAGCACTTAAGATCCTCTTCTCTGTTGATGGTCAACAAAACACTGATCAGACTCTGCACTTGCAACGGAATGAAGTGATTGCCTTGATGAACCTACTCAATCGACTCTCAGAATCTCTCAAGTTTGTTAATGAAATGGGACCCTCAACTGAAAGGCTAGTAGAAGGGCAGATTTCTCCACCCACCGCCCCTAGTTGCCCCATACAAAGGATGTGGGCATCTTTAAAATCTAGGTAA

Protein Analysis

455

Amino Acids

51.83

Weight (kDa)

5.88

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 578, 624, 1093
AciI CCGC 1 cut(s) 1314
AclWI GGATC 2 cut(s) 930, 1135
AcoI YGGCCR 1 cut(s) 75
AcsI RAATTY 1 cut(s) 678
AcuI CTGAAG 6 cut(s) 462, 675, 690, 947, 1058, 1094
AfaI GTAC 4 cut(s) 142, 460, 686, 833
AfeI AGCGCT 1 cut(s) 51
AfiI CCNNNNNNNGG 3 cut(s) 317, 398, 1335
AflII CTTAAG 1 cut(s) 1136
AgsI TTSAA 4 cut(s) 277, 385, 560, 774
AjnI CCWGG 1 cut(s) 506
AleI CACNNNNGTG 1 cut(s) 763
AluBI AGCT 8 cut(s) 247, 449, 602, 731, 952, 977, 1004, 1108
AluI AGCT 8 cut(s) 247, 449, 602, 731, 952, 977, 1004, 1108
Alw21I GWGCWC 1 cut(s) 249
Alw26I GTCTC 2 cut(s) 191, 518
AlwI GGATC 2 cut(s) 930, 1135
AlwNI CAGNNNCTG 2 cut(s) 486, 1183
Aor51HI AGCGCT 1 cut(s) 51
AoxI GGCC 4 cut(s) 39, 75, 308, 400
ApeKI GCWGC 3 cut(s) 446, 872, 977
ApoI RAATTY 1 cut(s) 678
Asp700I GAANNNNTTC 1 cut(s) 678
AspLEI GCGC 2 cut(s) 52, 668
AspS9I GGNCC 8 cut(s) 39, 205, 593, 799, 943, 1028, 1114, 1268
AvaII GGWCC 7 cut(s) 205, 593, 799, 943, 1028, 1114, 1268
BalI TGGCCA 1 cut(s) 77
BanII GRGCYC 1 cut(s) 249
BbsI GAAGAC 2 cut(s) 695, 935
Bbv12I GWGCWC 1 cut(s) 249
BbvI GCAGC 3 cut(s) 458, 859, 964
BccI CCATC 8 cut(s) 24, 241, 311, 402, 604, 658, 1060, 1151
BceAI ACGGC 4 cut(s) 26, 56, 312, 845
BciT130I CCWGG 1 cut(s) 508
BclI TGATCA 1 cut(s) 1174
BcoDI GTCTC 2 cut(s) 191, 518
BfaI CTAG 5 cut(s) 464, 603, 1286, 1320, 1359
BfmI CTRYAG 1 cut(s) 873
BfoI RGCGCY 1 cut(s) 53
BfrI CTTAAG 1 cut(s) 1136
BisI GCNGC 3 cut(s) 447, 873, 978
BlsI GCNGC 3 cut(s) 448, 874, 979
Bme1390I CCNGG 1 cut(s) 508
Bme18I GGWCC 7 cut(s) 205, 593, 799, 943, 1028, 1114, 1268
BmgT120I GGNCC 8 cut(s) 39, 205, 593, 799, 943, 1028, 1114, 1268
BmiI GGNNCC 3 cut(s) 800, 1269, 1270
BmrFI CCNGG 1 cut(s) 508
BmrI ACTGGG 1 cut(s) 980
BmsI GCATC 3 cut(s) 238, 607, 1355
BmuI ACTGGG 1 cut(s) 980
BpiI GAAGAC 2 cut(s) 695, 935
BplI GAGNNNNNCTC 2 cut(s) 79, 111
BpuEI CTTGAG 1 cut(s) 1232
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 5 cut(s) 72, 201, 506, 939, 1117
Bsc4I CCNNNNNNNGG 3 cut(s) 317, 398, 1335
Bse118I RCCGGY 1 cut(s) 581
Bse1I ACTGG 3 cut(s) 595, 910, 986
BseBI CCWGG 1 cut(s) 508
BseDI CCNNGG 5 cut(s) 72, 201, 506, 939, 1117
BseGI GGATG 4 cut(s) 229, 622, 1085, 1344
BseLI CCNNNNNNNGG 3 cut(s) 317, 398, 1335
BseMII CTCAG 3 cut(s) 158, 528, 1251
BseNI ACTGG 3 cut(s) 595, 910, 986
BseXI GCAGC 3 cut(s) 458, 859, 964
BseYI CCCAGC 1 cut(s) 5
BsgI GTGCAG 1 cut(s) 1169
BshFI GGCC 4 cut(s) 41, 77, 310, 402
BsiHKAI GWGCWC 1 cut(s) 249
BsiSI CCGG 1 cut(s) 582
BslFI GGGAC 3 cut(s) 624, 974, 1281
BslI CCNNNNNNNGG 3 cut(s) 317, 398, 1335
BsmAI GTCTC 2 cut(s) 191, 518
BsmFI GGGAC 3 cut(s) 624, 974, 1281
BsmI GAATGC 2 cut(s) 359, 476
BsnI GGCC 4 cut(s) 41, 77, 310, 402
Bso31I GGTCTC 1 cut(s) 191
Bsp1286I GDGCHC 1 cut(s) 249
Bsp1407I TGTACA 1 cut(s) 684
Bsp143I GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
BspACI CCGC 1 cut(s) 1314
BspANI GGCC 4 cut(s) 41, 77, 310, 402
BspCNI CTCAG 3 cut(s) 157, 529, 1250
BspLI GGNNCC 3 cut(s) 800, 1269, 1270
BspMAI CTGCAG 1 cut(s) 877
BspPI GGATC 2 cut(s) 930, 1135
BspTI CTTAAG 1 cut(s) 1136
BspTNI GGTCTC 1 cut(s) 191
BsrFI RCCGGY 1 cut(s) 581
BsrGI TGTACA 1 cut(s) 684
BsrI ACTGG 3 cut(s) 595, 910, 986
BssAI RCCGGY 1 cut(s) 581
BssECI CCNNGG 5 cut(s) 72, 201, 506, 939, 1117
BssMI GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
BssNAI GTATAC 1 cut(s) 579
BssT1I CCWWGG 2 cut(s) 939, 1117
Bst1107I GTATAC 1 cut(s) 579
Bst2UI CCWGG 1 cut(s) 508
Bst4CI ACNGT 5 cut(s) 140, 202, 458, 576, 638
Bst6I CTCTTC 2 cut(s) 651, 1151
BstAFI CTTAAG 1 cut(s) 1136
BstAUI TGTACA 1 cut(s) 684
BstC8I GCNNGC 1 cut(s) 982
BstDEI CTNAG 5 cut(s) 144, 537, 803, 1005, 1237
BstDSI CCRYGG 2 cut(s) 72, 201
BstF5I GGATG 4 cut(s) 229, 622, 1085, 1344
BstH2I RGCGCY 1 cut(s) 53
BstHHI GCGC 2 cut(s) 52, 668
BstKTI GATC 7 cut(s) 57, 418, 796, 817, 925, 1143, 1177
BstMAI GTCTC 2 cut(s) 191, 518
BstMBI GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
BstMWI GCNNNNNNNGC 3 cut(s) 47, 56, 626
BstNI CCWGG 1 cut(s) 508
BstNSI RCATGY 2 cut(s) 893, 984
BstSCI CCNGG 1 cut(s) 506
BstSFI CTRYAG 1 cut(s) 873
BstV1I GCAGC 3 cut(s) 458, 859, 964
BstV2I GAAGAC 2 cut(s) 695, 935
BstX2I RGATCY 2 cut(s) 922, 1140
BstYI RGATCY 2 cut(s) 922, 1140
BstZ17I GTATAC 1 cut(s) 579
BsuRI GGCC 4 cut(s) 41, 77, 310, 402
BtgI CCRYGG 2 cut(s) 72, 201
BtgZI GCGATG 1 cut(s) 43
BtsCI GGATG 4 cut(s) 229, 622, 1085, 1344
BtsIMutI CAGTG 4 cut(s) 588, 903, 1061, 1170
Cac8I GCNNGC 1 cut(s) 982
CaiI CAGNNNCTG 2 cut(s) 486, 1183
CfoI GCGC 2 cut(s) 52, 668
Cfr10I RCCGGY 1 cut(s) 581
Cfr13I GGNCC 8 cut(s) 39, 205, 593, 799, 943, 1028, 1114, 1268
CseI GACGC 2 cut(s) 126, 940
Csp6I GTAC 4 cut(s) 141, 459, 685, 832
CspCI CAANNNNNGTGG 2 cut(s) 1322, 1357
CviAII CATG 4 cut(s) 79, 398, 890, 981
CviQI GTAC 4 cut(s) 141, 459, 685, 832
DdeI CTNAG 5 cut(s) 144, 537, 803, 1005, 1237
DpnI GATC 7 cut(s) 56, 417, 795, 816, 924, 1142, 1176
DpnII GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
DraI TTTAAA 1 cut(s) 1353
EaeI YGGCCR 1 cut(s) 75
Eam1104I CTCTTC 2 cut(s) 651, 1151
EarI CTCTTC 2 cut(s) 651, 1151
Ecl136II GAGCTC 1 cut(s) 247
Eco130I CCWWGG 2 cut(s) 939, 1117
Eco24I GRGCYC 1 cut(s) 249
Eco31I GGTCTC 1 cut(s) 191
Eco32I GATATC 1 cut(s) 696
Eco47I GGWCC 7 cut(s) 205, 593, 799, 943, 1028, 1114, 1268
Eco47III AGCGCT 1 cut(s) 51
Eco53kI GAGCTC 1 cut(s) 247
Eco57I CTGAAG 6 cut(s) 462, 675, 690, 947, 1058, 1094
EcoICRI GAGCTC 1 cut(s) 247
EcoO109I RGGNCCY 3 cut(s) 799, 1114, 1268
EcoRI GAATTC 1 cut(s) 678
EcoRII CCWGG 1 cut(s) 506
EcoRV GATATC 1 cut(s) 696
EcoT14I CCWWGG 2 cut(s) 939, 1117
EcoT38I GRGCYC 1 cut(s) 249
ErhI CCWWGG 2 cut(s) 939, 1117
FaeI CATG 4 cut(s) 82, 401, 893, 984
FalI AAGNNNNNCTT 2 cut(s) 1130, 1162
FaqI GGGAC 3 cut(s) 624, 974, 1281
FatI CATG 4 cut(s) 78, 397, 889, 980
FauNDI CATATG 1 cut(s) 547
FbaI TGATCA 1 cut(s) 1174
FblI GTMKAC 3 cut(s) 578, 624, 1093
Fnu4HI GCNGC 3 cut(s) 447, 873, 978
FokI GGATG 4 cut(s) 216, 629, 1092, 1351
FriOI GRGCYC 1 cut(s) 249
Fsp4HI GCNGC 3 cut(s) 447, 873, 978
FspBI CTAG 5 cut(s) 464, 603, 1286, 1320, 1359
GlaI GCGC 2 cut(s) 51, 667
GluI GCNGC 3 cut(s) 447, 873, 978
GsaI CCCAGC 1 cut(s) 9
HaeII RGCGCY 1 cut(s) 53
HaeIII GGCC 4 cut(s) 41, 77, 310, 402
HapII CCGG 1 cut(s) 582
HgaI GACGC 2 cut(s) 126, 940
HhaI GCGC 2 cut(s) 52, 668
Hin1II CATG 4 cut(s) 82, 401, 893, 984
Hin6I GCGC 2 cut(s) 50, 666
HinP1I GCGC 2 cut(s) 50, 666
HincII GTYRAC 3 cut(s) 454, 1094, 1163
HindII GTYRAC 3 cut(s) 454, 1094, 1163
HindIII AAGCTT 1 cut(s) 1106
HinfI GANTC 6 cut(s) 377, 553, 565, 1180, 1233, 1241
HpaII CCGG 1 cut(s) 582
Hpy166II GTNNAC 9 cut(s) 205, 454, 461, 579, 625, 724, 1028, 1094, 1163
Hpy188III TCNNGA 5 cut(s) 87, 146, 385, 428, 569
Hpy8I GTNNAC 9 cut(s) 205, 454, 461, 579, 625, 724, 1028, 1094, 1163
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 3 cut(s) 413, 600, 1286
HpyCH4III ACNGT 5 cut(s) 140, 202, 458, 576, 638
HpyCH4IV ACGT 2 cut(s) 839, 1024
HpyCH4V TGCA 5 cut(s) 229, 875, 980, 1186, 1192
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 56, 626
HpyF3I CTNAG 5 cut(s) 144, 537, 803, 1005, 1237
HpySE526I ACGT 2 cut(s) 839, 1024
Hsp92II CATG 4 cut(s) 82, 401, 893, 984
HspAI GCGC 2 cut(s) 50, 666
KflI GGGWCCC 1 cut(s) 1268
Ksp22I TGATCA 1 cut(s) 1174
Kzo9I GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
LmnI GCTCC 2 cut(s) 47, 100
Lsp1109I GCAGC 3 cut(s) 458, 859, 964
LweI GCATC 3 cut(s) 238, 607, 1355
MaeI CTAG 5 cut(s) 464, 603, 1286, 1320, 1359
MaeII ACGT 2 cut(s) 839, 1024
MaeIII GTNAC 2 cut(s) 134, 862
MalI GATC 7 cut(s) 56, 417, 795, 816, 924, 1142, 1176
MboI GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
MboII GAAGA 7 cut(s) 103, 548, 668, 683, 695, 940, 1138
MflI RGATCY 2 cut(s) 922, 1140
MhlI GDGCHC 1 cut(s) 249
MlsI TGGCCA 1 cut(s) 77
MluCI AATT 1 cut(s) 678
MluNI TGGCCA 1 cut(s) 77
MlyI GAGTC 2 cut(s) 1174, 1227
MmeI TCCRAC 3 cut(s) 25, 970, 1057
MnlI CCTC 7 cut(s) 169, 424, 476, 721, 913, 1154, 1282
Mox20I TGGCCA 1 cut(s) 77
MroXI GAANNNNTTC 1 cut(s) 678
MscI TGGCCA 1 cut(s) 77
MseI TTAA 7 cut(s) 213, 252, 282, 915, 1137, 1257, 1352
MslI CAYNNNNRTG 1 cut(s) 763
Msp20I TGGCCA 1 cut(s) 77
MspA1I CMGCKG 1 cut(s) 449
MspCI CTTAAG 1 cut(s) 1136
MspI CCGG 1 cut(s) 582
MspR9I CCNGG 1 cut(s) 508
Mva1269I GAATGC 2 cut(s) 359, 476
MvaI CCWGG 1 cut(s) 508
MwoI GCNNNNNNNGC 3 cut(s) 47, 56, 626
NdeI CATATG 1 cut(s) 547
NdeII GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
NlaIII CATG 4 cut(s) 82, 401, 893, 984
NlaIV GGNNCC 3 cut(s) 800, 1269, 1270
NmuCI GTSAC 1 cut(s) 862
NspI RCATGY 2 cut(s) 893, 984
OliI CACNNNNGTG 1 cut(s) 763
PaeI GCATGC 1 cut(s) 984
PctI GAATGC 2 cut(s) 359, 476
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 4 cut(s) 377, 553, 565, 1241
PkrI GCNGC 3 cut(s) 448, 874, 979
PleI GAGTC 2 cut(s) 1174, 1227
PpsI GAGTC 2 cut(s) 1174, 1227
PpuMI RGGWCCY 3 cut(s) 799, 1114, 1268
Psp124BI GAGCTC 1 cut(s) 249
Psp5II RGGWCCY 3 cut(s) 799, 1114, 1268
Psp6I CCWGG 1 cut(s) 506
PspFI CCCAGC 1 cut(s) 5
PspGI CCWGG 1 cut(s) 506
PspN4I GGNNCC 3 cut(s) 800, 1269, 1270
PspPI GGNCC 8 cut(s) 39, 205, 593, 799, 943, 1028, 1114, 1268
PspPPI RGGWCCY 3 cut(s) 799, 1114, 1268
PstI CTGCAG 1 cut(s) 877
PstNI CAGNNNCTG 2 cut(s) 486, 1183
PsuI RGATCY 2 cut(s) 922, 1140
PvuII CAGCTG 1 cut(s) 449
RsaI GTAC 4 cut(s) 142, 460, 686, 833
RsaNI GTAC 4 cut(s) 141, 459, 685, 832
RseI CAYNNNNRTG 1 cut(s) 763
SacI GAGCTC 1 cut(s) 249
SalI GTCGAC 1 cut(s) 1092
SaqAI TTAA 7 cut(s) 213, 252, 282, 915, 1137, 1257, 1352
SatI GCNGC 3 cut(s) 447, 873, 978
Sau3AI GATC 7 cut(s) 54, 415, 793, 814, 922, 1140, 1174
Sau96I GGNCC 8 cut(s) 39, 205, 593, 799, 943, 1028, 1114, 1268
SchI GAGTC 2 cut(s) 1174, 1227
ScrFI CCNGG 1 cut(s) 508
SduI GDGCHC 1 cut(s) 249
SfaNI GCATC 3 cut(s) 238, 607, 1355
SfcI CTRYAG 1 cut(s) 873
SinI GGWCC 7 cut(s) 205, 593, 799, 943, 1028, 1114, 1268
SmiMI CAYNNNNRTG 1 cut(s) 763
SmlI CTYRAG 2 cut(s) 1136, 1247
SmoI CTYRAG 2 cut(s) 1136, 1247
SphI GCATGC 1 cut(s) 984
Sse9I AATT 1 cut(s) 678
SsiI CCGC 1 cut(s) 1314
SspMI CTAG 5 cut(s) 464, 603, 1286, 1320, 1359
SstI GAGCTC 1 cut(s) 249
StyD4I CCNGG 1 cut(s) 506
StyI CCWWGG 2 cut(s) 939, 1117
TaaI ACNGT 5 cut(s) 140, 202, 458, 576, 638
TaiI ACGT 2 cut(s) 842, 1027
TaqI TCGA 3 cut(s) 86, 1093, 1231
TasI AATT 1 cut(s) 678
TatI WGTACW 3 cut(s) 140, 684, 831
TfiI GAWTC 4 cut(s) 377, 553, 565, 1241
Tru1I TTAA 7 cut(s) 213, 252, 282, 915, 1137, 1257, 1352
Tru9I TTAA 7 cut(s) 213, 252, 282, 915, 1137, 1257, 1352
TscAI CASTG 4 cut(s) 595, 910, 1068, 1177
TseFI GTSAC 1 cut(s) 862
TseI GCWGC 3 cut(s) 446, 872, 977
Tsp45I GTSAC 1 cut(s) 862
TspDTI ATGAA 5 cut(s) 695, 765, 1215, 1232, 1275
TspGWI ACGGA 2 cut(s) 249, 1210
TspRI CASTG 4 cut(s) 595, 910, 1068, 1177
Vha464I CTTAAG 1 cut(s) 1136
VpaK11BI GGWCC 7 cut(s) 205, 593, 799, 943, 1028, 1114, 1268
XapI RAATTY 1 cut(s) 678
XceI RCATGY 2 cut(s) 893, 984
XmiI GTMKAC 3 cut(s) 578, 624, 1093
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 5 cut(s) 464, 603, 1286, 1320, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.