Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0008284

Physical Location & Seq

Genomic Coordinates Forward (+)

10825714 .. 10836069

Gene Structure 10356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G009930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGTGAGGGAGAAGAGTAAAGGAAAGCGATGGGGTTGGGTGGTGGGAGCTGTGATCGCTCTGTTGGTTGCTGTGGCTTTGAGCTCTGCACCCAAAATTGCTCTCTTTGGTTCCTCCAACAAGCCCTGTAATTGTACTCAGGGTGCCAATAAGTATAGTGGGATAGTGGAGGATTGTTGTTGTGATTATGAGACTGTGGACCGGCTTAACAAGGAAGTTCTGCACCCCTCGCTACAAGAGCTTGTTAAAACTCCGTTTTTTCGGTATTTCAAGGTTAAGTTATGGTGTGACTGCCCTTTCTGGCCTGATGATGGTATGTGCCGGCTGAGAGATTGCAGTGTATGCGAATGTCCAGATAGTGAATTCCCTGAATCGTTTAAGAAACCCAACCATGGCCTTCCTGGGGATAATCCTATCTGTCAAGAAGGAAAGCCTGAGGCTGCTGTTGACCGTACACTAGATAGAAAAGCTTTCAGAGGCTGGACAGAAATAGACAATCCCTGGACAAATGACGATGAGACTGACAACGCTGAGATGACGTATGTGAATCTTCAACTAAATCCTGAGCGATACACTGGCTACACTGGTCCATCTGCTAGAAGGATATGGGATTCTGTCTATGCAGAGAACTGCCCCAAGTATCCATCTGAAGAGTTATGCTATGAGGAAAGAATTCTGTACAAGTTGATATCTGGTCTTCATTCATCAATTTCAGTCCACATAGCGTCAGATTATCTACTTGATGAAACTACACAGACGTGGGGCCAAAATCTCTCATTGATGTATGATCGGGTCCTAAGATACCCTGATCGTGTCAGAAACTTGTACTTCACATATCTCTTCGTTCTTCGAGCTGTGACAAAGGCAGCAGATTACTTGGAACATGCTGAATATGACACCGGTAATCATACTGAAGATCTGAAGACACAATCCCTGACAAAACAGCTACTCTATAATCCCAAATTACAAGCTGCATGCCCAATCCCATTTGATGAAGCTAAATTGTGGAAAGGCCAGAGTGGTCCTGAACTGAAGCAGAAAATACAGAAACAGTTCAGAAACATTAGTGCATTGATGGATTGTGTAGGATGTGAGAAATGTCGGCTGTGGGGGAAGCTTCAGGTCCTTGGTCTTGGCACTGCACTTAAAATCCTCTTCTCTGTTGATGGTCAACCAAACTCCCATCAGAATCTGCAGTTGCAGCGGAATGAAGTGATTGCCTTGATAAACCTGCTCAATCGACTCTCAGAATCCGTCAAGTTTGTTCATGAAATGGGACTTTCAGCTGAAATAGAAGCAAACACAGCAGCAACCAAACCTAATCTCCCCGCCACCACCACCACCACCACCATGAGTCTAATCGCCGGCTCCTACGAGAAATTCTTATGGGGCTTCAAGCTCAAACCCCAAAACACCGACCCTAATTCCAAAACCCTAACCCTAATCCCCCTCTTCTCCTACCCCTCCCACCTCTCCGCCATCACCTCCGTCGCCACCGCCGGCCCCGCCGCCGCCTCCGGAGGCTCGGACGACACCATCCAGCTCTACGACCTCTCCCACGCCACCTCCGTCGGCTCCCTCAACGACCACGCCGCCACCGTCACCTCCCTCTCCTTCTTCGCCCCTCCCAACCTCTCCGTCCCCCTCAACCTCGTCTCCGGCGACGCCGACGGCACCTTCTGCATCTACGAGGCCGACCCCTTCGTCCTCCTCAAGAGCCTCAAGCCGCACCGCAAGGCCATAAACGACTTGTCGTTGCACCCCTCCGGGAAGCTGGCTTTGACCGTGGGGAAAGATGAGTGCTTGGCGATGATTAACTTGGTGAGGGGGAGGAGGAGCTTTTATTGCAGGTTGGGGAAGGAGGCTAGCTTGGTGGACTTCAATGGGTCCGGGGATAAGTTCTACTTGGCTACTGAGGAGAAAGTGACCGTTCATGAGGCTGAGGATGCCAAATTGGTTTGCGAAATGGAGAATCCGAAAAGGGTTCTTTGTGCTGAGCCCGGTGAGAATGGACTTCTGTTCACTGGTGGTGAGGATCGGGGTATTACAGCTTGGGACACAAACACTGGGAAGGTTGCATATCGCATTGAGGATGCACATTCAACCCGCGTTAAAGGGATTGTGGTGTTGAAAAGCAGTTCTGGTGATGTAGACAATGAGGATCCTTATCTTGTTGCATCTGGGTCGTCAGATGGGGTTATACGACTTTGGGATGTTCGTATGGCTGTTAAGGATAATAAGCCAAATCCCTTAGCTGAGGCTAATACAAAATCAAGGCTTACTTGTCTGGCCGGATCGTCTCTTAAATCTTTCAAACAACCACAGGTTGGAAAAAGAGTTCAGAAAGAAAAGCATGATGCAGCAAAAGATGGCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015035 GO:0015036 GO:0016020 GO:0016491 GO:0016667 GO:0016853 GO:0016860 GO:0016864 GO:0019538 GO:0031984 GO:0034975 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04141 ko05110 map04141 map05110

Pfam Domains

Protein Families

ERO1

Protein Analysis

792

Amino Acids

87.8

Weight (kDa)

6.29

Isoelectric Point (pI)

31.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERO1	PF04137	74 - 421	1.1e-121	Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
Beta-prop_WDR3_1st	PF25173	492 - 607	4.6e-10	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	499 - 611	1.1e-08	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	499 - 697	1.3e-13	THOC3 beta-propeller domain
WD40_Prp19	PF24814	500 - 654	1.8e-14	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	574 - 741	2.9e-10	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	577 - 744	1.1e-06	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	595 - 742	6.9e-07	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	644 - 741	5.1e-07	WDR3 first beta-propeller domain
Beta-prop_EML	PF23409	652 - 742	3.4e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19	PF24814	665 - 741	4.2e-06	Prp19 WD40 domain
WDR55	PF24796	672 - 742	7.8e-07	WDR55

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008284)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38960 AT2G38960 AT2G38960
fragaria_vesca	FvH4_3g05200 FvH4_3g05200
malus_domestica	MD05G1280900.v1.1 MD10G1259300.v1.1
prunus_persica	Prupe.4G084000_v2.0.a1 Prupe.4G084000_v2.0.a1 Prupe.4G084000_v2.0.a1
pyrus_communis	pycom05g26110 pycom10g21580
rosa_chinensis	RchiOBHm_Chr5g0014551
rosa_laevigata	RLG00000032127
rosa_multiflora	Rmu_sc0000120.1_g000002 Rmu_sc0001283.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061930
rosa_rugosa	Rorug05G0019300
rosa_samantha	Rh5AG114500 Rh5BG111400 Rh5CG122900 Rh5DG110800
rosa_wichuraiana	Rw5G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1703
Acc36I	ACCTGC	2 cut(s)	1239, 1839
AccB1I	GGYRCC	2 cut(s)	143, 1673
AccB7I	CCANNNNNTGG	1 cut(s)	2327
AccI	GTMKAC	1 cut(s)	2151
AccII	CGCG	1 cut(s)	2109
AccIII	TCCGGA	1 cut(s)	1517
AclWI	GGATC	4 cut(s)	2043, 2156, 2169, 2302
AcoI	YGGCCR	1 cut(s)	2289
AcsI	RAATTY	3 cut(s)	362, 672, 1379
AcuI	CTGAAG	5 cut(s)	669, 933, 941, 1052, 1103
AcyI	GRCGYC	1 cut(s)	1665
AfaI	GTAC	4 cut(s)	136, 454, 680, 827
AfiI	CCNNNNNNNGG	4 cut(s)	311, 392, 403, 2327
AgeI	ACCGGT	1 cut(s)	899
AgsI	TTSAA	7 cut(s)	271, 554, 1396, 1882, 2103, 2131, 2314
AjiI	CACGTC	1 cut(s)	759
AjnI	CCWGG	2 cut(s)	400, 500
AleI	CACNNNNGTG	1 cut(s)	757
AloI	GAACNNNNNNTCC	2 cut(s)	2322, 2354
Alw21I	GWGCWC	1 cut(s)	86
Alw26I	GTCTC	4 cut(s)	185, 512, 1660, 2304
AlwI	GGATC	4 cut(s)	2043, 2156, 2169, 2302
AlwNI	CAGNNNCTG	2 cut(s)	480, 1192
Aor13HI	TCCGGA	1 cut(s)	1517
AoxI	GGCC	8 cut(s)	302, 394, 763, 1012, 1501, 1692, 1737, 2289
ApeKI	GCWGC	6 cut(s)	440, 866, 971, 1201, 1307, 2360
ApoI	RAATTY	3 cut(s)	362, 672, 1379
AsiGI	ACCGGT	1 cut(s)	899
Asp700I	GAANNNNTTC	2 cut(s)	672, 1052
AspS9I	GGNCC	8 cut(s)	199, 587, 763, 793, 1022, 1123, 1502, 1887
AsuC2I	CCSGG	3 cut(s)	1768, 1891, 2001
AsuHPI	GGTGA	7 cut(s)	16, 1474, 1594, 1834, 2015, 2042, 2156
AsuNHI	GCTAGC	1 cut(s)	1865
AvaII	GGWCC	6 cut(s)	199, 587, 793, 1022, 1123, 1887
AxyI	CCTNAGG	1 cut(s)	435
BamHI	GGATCC	1 cut(s)	2161
BanI	GGYRCC	2 cut(s)	143, 1673
BanII	GRGCYC	2 cut(s)	86, 2001
BbsI	GAAGAC	2 cut(s)	689, 929
Bbv12I	GWGCWC	1 cut(s)	86
BbvCI	CCTCAGC	2 cut(s)	1941, 2256
BbvI	GCAGC	6 cut(s)	427, 878, 958, 1213, 1319, 2372
BceAI	ACGGC	1 cut(s)	1687
BcgI	CGANNNNNNTGC	2 cut(s)	2166, 2200
BciT130I	CCWGG	2 cut(s)	402, 502
BciVI	GTATCC	1 cut(s)	651
BcnI	CCSGG	3 cut(s)	1768, 1891, 2001
BcoDI	GTCTC	4 cut(s)	185, 512, 1660, 2304
BfaI	CTAG	3 cut(s)	458, 597, 1866
BfmI	CTRYAG	1 cut(s)	1193
BfuAI	ACCTGC	2 cut(s)	1239, 1839
BfuI	GTATCC	1 cut(s)	651
BglII	AGATCT	1 cut(s)	916
BlpI	GCTNAGC	1 cut(s)	1995
Bme1390I	CCNGG	5 cut(s)	402, 502, 1768, 1891, 2001
Bme18I	GGWCC	6 cut(s)	199, 587, 793, 1022, 1123, 1887
BmgBI	CACGTC	1 cut(s)	759
BmgT120I	GGNCC	8 cut(s)	199, 587, 763, 793, 1022, 1123, 1502, 1887
BmrFI	CCNGG	5 cut(s)	402, 502, 1768, 1891, 2001
BmrI	ACTGGG	1 cut(s)	2076
BmsI	GCATC	5 cut(s)	1692, 1936, 2083, 2186, 2347
BmtI	GCTAGC	1 cut(s)	1869
BmuI	ACTGGG	1 cut(s)	2076
BpiI	GAAGAC	2 cut(s)	689, 929
Bpu10I	CCTNAGC	4 cut(s)	564, 1941, 2251, 2256
Bpu1102I	GCTNAGC	1 cut(s)	1995
BpuEI	CTTGAG	2 cut(s)	1697, 1706
BpuMI	CCSGG	3 cut(s)	1768, 1891, 2001
BsaBI	GATNNNNATC	1 cut(s)	2166
BsaHI	GRCGYC	1 cut(s)	1665
BsaJI	CCNNGG	6 cut(s)	391, 401, 500, 1126, 1785, 1890
BsaWI	WCCGGW	2 cut(s)	899, 1517
BsaXI	ACNNNNNCTCC	8 cut(s)	1308, 1338, 1538, 1550, 1568, 1580, 1640, 1670
Bsc4I	CCNNNNNNNGG	4 cut(s)	311, 392, 403, 2327
Bse118I	RCCGGY	5 cut(s)	201, 321, 899, 1364, 1499
Bse1I	ACTGG	4 cut(s)	580, 589, 2029, 2071
Bse21I	CCTNAGG	1 cut(s)	435
Bse8I	GATNNNNATC	1 cut(s)	2166
BseAI	TCCGGA	1 cut(s)	1517
BseBI	CCWGG	2 cut(s)	402, 502
BseDI	CCNNGG	6 cut(s)	391, 401, 500, 1126, 1785, 1890
BseGI	GGATG	5 cut(s)	1094, 1536, 1951, 2098, 2218
BseJI	GATNNNNATC	1 cut(s)	2166
BseLI	CCNNNNNNNGG	4 cut(s)	311, 392, 403, 2327
BseNI	ACTGG	4 cut(s)	580, 589, 2029, 2071
BseRI	GAGGAG	4 cut(s)	1700, 1846, 1849, 1931
BseXI	GCAGC	6 cut(s)	427, 878, 958, 1213, 1319, 2372
BsgI	GTGCAG	3 cut(s)	72, 206, 1125
Bsh1236I	CGCG	1 cut(s)	2109
BshFI	GGCC	8 cut(s)	304, 396, 765, 1014, 1503, 1694, 1739, 2291
BshNI	GGYRCC	2 cut(s)	143, 1673
BshTI	ACCGGT	1 cut(s)	899
BsiHKAI	GWGCWC	1 cut(s)	86
BslFI	GGGAC	3 cut(s)	1290, 1625, 2069
BslI	CCNNNNNNNGG	4 cut(s)	311, 392, 403, 2327
BsmAI	GTCTC	4 cut(s)	185, 512, 1660, 2304
BsmBI	CGTCTC	2 cut(s)	1660, 2304
BsmFI	GGGAC	3 cut(s)	1290, 1625, 2069
BsnI	GGCC	8 cut(s)	304, 396, 765, 1014, 1503, 1694, 1739, 2291
Bsp1286I	GDGCHC	2 cut(s)	86, 2001
Bsp13I	TCCGGA	1 cut(s)	1517
Bsp1407I	TGTACA	1 cut(s)	678
Bsp143I	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
Bsp1720I	GCTNAGC	1 cut(s)	1995
Bsp19I	CCATGG	1 cut(s)	391
BspANI	GGCC	8 cut(s)	304, 396, 765, 1014, 1503, 1694, 1739, 2291
BspEI	TCCGGA	1 cut(s)	1517
BspFNI	CGCG	1 cut(s)	2109
BspHI	TCATGA	2 cut(s)	1267, 1933
BspMAI	CTGCAG	1 cut(s)	1197
BspMI	ACCTGC	2 cut(s)	1239, 1839
BspOI	GCTAGC	1 cut(s)	1869
BspPI	GGATC	4 cut(s)	2043, 2156, 2169, 2302
BspT107I	GGYRCC	2 cut(s)	143, 1673
BsrFI	RCCGGY	5 cut(s)	201, 321, 899, 1364, 1499
BsrGI	TGTACA	1 cut(s)	678
BsrI	ACTGG	4 cut(s)	580, 589, 2029, 2071
BssAI	RCCGGY	5 cut(s)	201, 321, 899, 1364, 1499
BssECI	CCNNGG	6 cut(s)	391, 401, 500, 1126, 1785, 1890
BssMI	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
BssNI	GRCGYC	1 cut(s)	1665
BssT1I	CCWWGG	2 cut(s)	391, 1126
Bst2UI	CCWGG	2 cut(s)	402, 502
Bst4CI	ACNGT	6 cut(s)	196, 452, 1053, 1600, 1786, 1930
Bst6I	CTCTTC	5 cut(s)	8, 645, 845, 1160, 1457
BstACI	GRCGYC	1 cut(s)	1665
BstAPI	GCANNNNNTGC	2 cut(s)	342, 1680
BstAUI	TGTACA	1 cut(s)	678
BstC8I	GCNNGC	6 cut(s)	323, 976, 1366, 1501, 1776, 1867
BstDSI	CCRYGG	2 cut(s)	391, 1785
BstF5I	GGATG	5 cut(s)	1094, 1536, 1951, 2098, 2218
BstFNI	CGCG	1 cut(s)	2109
BstKTI	GATC	7 cut(s)	57, 790, 811, 919, 2038, 2164, 2297
BstMAI	GTCTC	4 cut(s)	185, 512, 1660, 2304
BstMBI	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
BstNI	CCWGG	2 cut(s)	402, 502
BstNSI	RCATGY	2 cut(s)	887, 978
BstSCI	CCNGG	5 cut(s)	400, 500, 1766, 1889, 1999
BstSFI	CTRYAG	1 cut(s)	1193
BstUI	CGCG	1 cut(s)	2109
BstV1I	GCAGC	6 cut(s)	427, 878, 958, 1213, 1319, 2372
BstV2I	GAAGAC	2 cut(s)	689, 929
BstX2I	RGATCY	2 cut(s)	916, 2161
BstYI	RGATCY	2 cut(s)	916, 2161
Bsu36I	CCTNAGG	1 cut(s)	435
BsuI	GTATCC	1 cut(s)	651
BsuRI	GGCC	8 cut(s)	304, 396, 765, 1014, 1503, 1694, 1739, 2291
BtgI	CCRYGG	2 cut(s)	391, 1785
BtgZI	GCGATG	2 cut(s)	43, 1823
BtrI	CACGTC	1 cut(s)	759
BtsCI	GGATG	5 cut(s)	1094, 1536, 1951, 2098, 2218
BtsI	GCAGTG	2 cut(s)	343, 1137
BtsIMutI	CAGTG	6 cut(s)	343, 573, 582, 1137, 2022, 2064
BveI	ACCTGC	2 cut(s)	1239, 1839
Cac8I	GCNNGC	6 cut(s)	323, 976, 1366, 1501, 1776, 1867
CaiI	CAGNNNCTG	2 cut(s)	480, 1192
CciI	TCATGA	2 cut(s)	1267, 1933
Cfr10I	RCCGGY	5 cut(s)	201, 321, 899, 1364, 1499
Cfr13I	GGNCC	8 cut(s)	199, 587, 763, 793, 1022, 1123, 1502, 1887
CseI	GACGC	2 cut(s)	714, 1673
Csp6I	GTAC	4 cut(s)	135, 453, 679, 826
CspAI	ACCGGT	1 cut(s)	899
CviAII	CATG	7 cut(s)	392, 884, 975, 1268, 1351, 1934, 2354
CviQI	GTAC	4 cut(s)	135, 453, 679, 826
DpnI	GATC	7 cut(s)	56, 789, 810, 918, 2037, 2163, 2296
DpnII	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
DrdI	GACNNNNNNGTC	1 cut(s)	1703
DseDI	GACNNNNNNGTC	1 cut(s)	1703
EaeI	YGGCCR	1 cut(s)	2289
Eam1104I	CTCTTC	5 cut(s)	8, 645, 845, 1160, 1457
EarI	CTCTTC	5 cut(s)	8, 645, 845, 1160, 1457
EciI	GGCGGA	1 cut(s)	1465
Ecl136II	GAGCTC	1 cut(s)	84
Eco130I	CCWWGG	2 cut(s)	391, 1126
Eco24I	GRGCYC	2 cut(s)	86, 2001
Eco32I	GATATC	1 cut(s)	690
Eco47I	GGWCC	6 cut(s)	199, 587, 793, 1022, 1123, 1887
Eco53kI	GAGCTC	1 cut(s)	84
Eco57I	CTGAAG	5 cut(s)	669, 933, 941, 1052, 1103
Eco81I	CCTNAGG	1 cut(s)	435
EcoICRI	GAGCTC	1 cut(s)	84
EcoO109I	RGGNCCY	2 cut(s)	793, 1123
EcoRI	GAATTC	2 cut(s)	362, 672
EcoRII	CCWGG	2 cut(s)	400, 500
EcoRV	GATATC	1 cut(s)	690
EcoT14I	CCWWGG	2 cut(s)	391, 1126
EcoT38I	GRGCYC	2 cut(s)	86, 2001
ErhI	CCWWGG	2 cut(s)	391, 1126
Esp3I	CGTCTC	2 cut(s)	1660, 2304
FaeI	CATG	7 cut(s)	395, 887, 978, 1271, 1354, 1937, 2357
FalI	AAGNNNNNCTT	4 cut(s)	1889, 1921, 2266, 2298
FaqI	GGGAC	3 cut(s)	1290, 1625, 2069
FatI	CATG	7 cut(s)	391, 883, 974, 1267, 1350, 1933, 2353
FauI	CCCGC	3 cut(s)	1336, 1513, 2114
FblI	GTMKAC	1 cut(s)	2151
FokI	GGATG	5 cut(s)	1101, 1523, 1958, 2105, 2225
FriOI	GRGCYC	2 cut(s)	86, 2001
FspBI	CTAG	3 cut(s)	458, 597, 1866
HaeIII	GGCC	8 cut(s)	304, 396, 765, 1014, 1503, 1694, 1739, 2291
HgaI	GACGC	2 cut(s)	714, 1673
Hin1I	GRCGYC	1 cut(s)	1665
Hin1II	CATG	7 cut(s)	395, 887, 978, 1271, 1354, 1937, 2357
HincII	GTYRAC	2 cut(s)	448, 1172
HindII	GTYRAC	2 cut(s)	448, 1172
HindIII	AAGCTT	2 cut(s)	468, 1115
HinfI	GANTC	8 cut(s)	371, 547, 611, 1189, 1242, 1250, 1354, 1972
HphI	GGTGA	7 cut(s)	16, 1474, 1594, 1834, 2015, 2042, 2156
Hpy166II	GTNNAC	8 cut(s)	199, 448, 455, 718, 1172, 1876, 2022, 2152
Hpy188III	TCNNGA	8 cut(s)	353, 422, 563, 1025, 1268, 1518, 1714, 1934
Hpy8I	GTNNAC	8 cut(s)	199, 448, 455, 718, 1172, 1876, 2022, 2152
Hpy99I	CGWCG	4 cut(s)	1493, 1574, 1667, 1673
HpyAV	CCTTC	8 cut(s)	407, 419, 594, 1624, 1687, 1711, 1852, 2065
HpyCH4III	ACNGT	6 cut(s)	196, 452, 1053, 1600, 1786, 1930
HpyCH4IV	ACGT	2 cut(s)	539, 758
HpySE526I	ACGT	2 cut(s)	539, 758
Hsp92I	GRCGYC	1 cut(s)	1665
Hsp92II	CATG	7 cut(s)	395, 887, 978, 1271, 1354, 1937, 2357
Kpn2I	TCCGGA	1 cut(s)	1517
KroI	GCCGGC	3 cut(s)	321, 1364, 1499
KroNI	GCCGGC	3 cut(s)	323, 1366, 1501
Kzo9I	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
LmnI	GCTCC	4 cut(s)	47, 1373, 1580, 1836
Lsp1109I	GCAGC	6 cut(s)	427, 878, 958, 1213, 1319, 2372
LweI	GCATC	5 cut(s)	1692, 1936, 2083, 2186, 2347
MaeI	CTAG	3 cut(s)	458, 597, 1866
MaeII	ACGT	2 cut(s)	539, 758
MaeIII	GTNAC	4 cut(s)	287, 856, 1600, 1924
MalI	GATC	7 cut(s)	56, 789, 810, 918, 2037, 2163, 2296
MboI	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
MflI	RGATCY	2 cut(s)	916, 2161
MhlI	GDGCHC	2 cut(s)	86, 2001
MlyI	GAGTC	2 cut(s)	1236, 1363
MmeI	TCCRAC	2 cut(s)	141, 2308
MroI	TCCGGA	1 cut(s)	1517
MroNI	GCCGGC	3 cut(s)	321, 1364, 1499
MroXI	GAANNNNTTC	2 cut(s)	672, 1052
MseI	TTAA	9 cut(s)	207, 246, 276, 378, 1146, 1815, 2112, 2229, 2304
MslI	CAYNNNNRTG	2 cut(s)	757, 1349
MspA1I	CMGCKG	2 cut(s)	1204, 1286
MspR9I	CCNGG	5 cut(s)	402, 502, 1768, 1891, 2001
MvaI	CCWGG	2 cut(s)	402, 502
MvnI	CGCG	1 cut(s)	2109
NaeI	GCCGGC	3 cut(s)	323, 1366, 1501
NciI	CCSGG	3 cut(s)	1768, 1891, 2001
NcoI	CCATGG	1 cut(s)	391
NdeII	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
NgoMIV	GCCGGC	3 cut(s)	321, 1364, 1499
NheI	GCTAGC	1 cut(s)	1865
NlaIII	CATG	7 cut(s)	395, 887, 978, 1271, 1354, 1937, 2357
NmuCI	GTSAC	4 cut(s)	287, 856, 1600, 1924
NspI	RCATGY	2 cut(s)	887, 978
OliI	CACNNNNGTG	1 cut(s)	757
PaeI	GCATGC	1 cut(s)	978
PagI	TCATGA	2 cut(s)	1267, 1933
PcsI	WCGNNNNNNNCGW	3 cut(s)	1566, 1596, 1659
PdiI	GCCGGC	3 cut(s)	323, 1366, 1501
PdmI	GAANNNNTTC	2 cut(s)	672, 1052
PfeI	GAWTC	6 cut(s)	371, 547, 611, 1189, 1250, 1972
PflMI	CCANNNNNTGG	1 cut(s)	2327
PfoI	TCCNGGA	1 cut(s)	1766
PinAI	ACCGGT	1 cut(s)	899
PleI	GAGTC	2 cut(s)	1236, 1362
PpsI	GAGTC	2 cut(s)	1236, 1362
PpuMI	RGGWCCY	2 cut(s)	793, 1123
Psp124BI	GAGCTC	1 cut(s)	86
Psp5II	RGGWCCY	2 cut(s)	793, 1123
Psp6I	CCWGG	2 cut(s)	400, 500
PspGI	CCWGG	2 cut(s)	400, 500
PspPI	GGNCC	8 cut(s)	199, 587, 763, 793, 1022, 1123, 1502, 1887
PspPPI	RGGWCCY	2 cut(s)	793, 1123
PstI	CTGCAG	1 cut(s)	1197
PstNI	CAGNNNCTG	2 cut(s)	480, 1192
PsuI	RGATCY	2 cut(s)	916, 2161
PvuII	CAGCTG	1 cut(s)	1286
RsaI	GTAC	4 cut(s)	136, 454, 680, 827
RsaNI	GTAC	4 cut(s)	135, 453, 679, 826
RseI	CAYNNNNRTG	2 cut(s)	757, 1349
SacI	GAGCTC	1 cut(s)	86
SaqAI	TTAA	9 cut(s)	207, 246, 276, 378, 1146, 1815, 2112, 2229, 2304
Sau3AI	GATC	7 cut(s)	54, 787, 808, 916, 2035, 2161, 2294
Sau96I	GGNCC	8 cut(s)	199, 587, 763, 793, 1022, 1123, 1502, 1887
SchI	GAGTC	2 cut(s)	1236, 1363
ScrFI	CCNGG	5 cut(s)	402, 502, 1768, 1891, 2001
SduI	GDGCHC	2 cut(s)	86, 2001
SfaNI	GCATC	5 cut(s)	1692, 1936, 2083, 2186, 2347
SfcI	CTRYAG	1 cut(s)	1193
SinI	GGWCC	6 cut(s)	199, 587, 793, 1022, 1123, 1887
SmiMI	CAYNNNNRTG	2 cut(s)	757, 1349
SmlI	CTYRAG	2 cut(s)	1712, 1721
SmoI	CTYRAG	2 cut(s)	1712, 1721
SphI	GCATGC	1 cut(s)	978
SspMI	CTAG	3 cut(s)	458, 597, 1866
SstI	GAGCTC	1 cut(s)	86
StyD4I	CCNGG	5 cut(s)	400, 500, 1766, 1889, 1999
StyI	CCWWGG	2 cut(s)	391, 1126
TaaI	ACNGT	6 cut(s)	196, 452, 1053, 1600, 1786, 1930
TaiI	ACGT	2 cut(s)	542, 761
TaqI	TCGA	2 cut(s)	850, 1240
TatI	WGTACW	3 cut(s)	134, 678, 825
TauI	GCSGC	4 cut(s)	1511, 1514, 1595, 1729
TfiI	GAWTC	6 cut(s)	371, 547, 611, 1189, 1250, 1972
Tru1I	TTAA	9 cut(s)	207, 246, 276, 378, 1146, 1815, 2112, 2229, 2304
Tru9I	TTAA	9 cut(s)	207, 246, 276, 378, 1146, 1815, 2112, 2229, 2304
TscAI	CASTG	6 cut(s)	343, 580, 589, 1144, 2029, 2071
TseFI	GTSAC	4 cut(s)	287, 856, 1600, 1924
TseI	GCWGC	6 cut(s)	440, 866, 971, 1201, 1307, 2360
Tsp45I	GTSAC	4 cut(s)	287, 856, 1600, 1924
TspDTI	ATGAA	8 cut(s)	689, 693, 759, 1008, 1224, 1256, 1284, 1922
TspGWI	ACGGA	5 cut(s)	243, 1243, 1477, 1558, 1627
TspRI	CASTG	6 cut(s)	343, 580, 589, 1144, 2029, 2071
Van91I	CCANNNNNTGG	1 cut(s)	2327
VpaK11BI	GGWCC	6 cut(s)	199, 587, 793, 1022, 1123, 1887
XapI	RAATTY	3 cut(s)	362, 672, 1379
XceI	RCATGY	2 cut(s)	887, 978
XcmI	CCANNNNNNNNNTGG	1 cut(s)	398
XmiI	GTMKAC	1 cut(s)	2151
XmnI	GAANNNNTTC	2 cut(s)	672, 1052
XspI	CTAG	3 cut(s)	458, 597, 1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.