Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0007808

Physical Location & Seq

Genomic Coordinates Reverse (-)

46375447 .. 46377318

Gene Structure 1872 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1344100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGCTACCAAATCAGCGGCCCAAGACCTCTCCTCCTCCGACACCCCATCCAAACCCCCACCCACTCCTCTTCCGATCCCCGCCAATCCCGAGACTCCGACCACCGCCGCTCCCCGCCATCCTCAACCGCGTCCCACCTCCGACGCCGACGTCATCCACGTCCCCAGCTATTCCAGCTGGTTCTCGCCGGACCACATCCACCACTGCGAGGTCCGATTCCTCCCCGAGTTCTTCGATTCTCGGTCCCCTTCTAAAAACCCTAGCCTCTATAAGTATTACCGCAACACCATCGTCGCCCAATCCAGAGCCGTCAACCCTTCTCGGAAGCTCACCTTCACGGAGGCCCGCAAGTCTCTCGTCGGCGACGTCGGCTCCGTTCGGAGGGTTTTCGATTTCCTCGAGGCGTGGGGTTTGATCAATTACACTCCTTCCGCGCTCAACAAGCCCCTCAAGTGGGAGGACAAGGACAGCAGCAAGGCCGCCGGTGCTTCCTCTAATGGAGGCGCTGAATCCCCCGCCGGCGGTGCCAAGGAGAGCCCCAAGAAGAGGACCTGCAATGGCTGCAAGTCTGTTTGCAGCATTGCCTGCTTTGTTTCCGAAAAGAATGACATGACTCTATGTGCAAGGTGCTATGTTCGCGGAAACTATCAGATCGGCATAAGTTCTTCCGATTTCAGGCGGGTTGAGATCAATGAAGAGATGGGGAGTGGCTGGGCTGATAAAGATACTCTGCATCTTCTAGAGGCCCTTATGCATTATGGCGACGACTGGAGGAAGGTTGCGCAACATGTCGGTAGAAGCGAGAAGGAATGTGTTGCTCATTTCCTCAAGATTCCATTTGGTGAGGAATTTTCTGGCGAATTTTCTGACAATGCAGGTGATGCTGAATGTGGTTTGGAGGGTGATGGTGATGGTACAACACCGTCTCTAAGTAAAAGAATGCGTCTCACGCCTCTTGCGGATGCAAGCAACCCAATTATGGCTCAGGCGGCCTTTCTGTCAGCTCTGGCGGGCGTGCAGGTTGCAGAGGCTGCTGCTTCTGCTGCTGTAACAGCGCTATGTGAGGCGGATTATGAAACAAGTAAAATGAGCGTTACATCTCTGGCTTCGAATGCAAGACAGCATGAAACTGATGCTGAATTAAACGGAGACGACAAAACTGACCCGGATGCACTGGGGGCAGCTTTTGTAGATGCGAATTCACAGCTTGAGAAGGAAGGGCTGGATGTGGGAAGAGCAATCTCCGGGATTACAGAGGTACAGATGAGAGAGATCCGAAAGAAGATTATCCGTTTCGAGGCGTTAGATTTGCAGATGGAGAAAGAGTGGGAACAACTGGAGCAAATGAAAAGCATGCTCTTTGTCGATCAGATGACACTTTTGTTAAGCAAAAGTTCCGCACCAAAAACCGCGGCGGCGGAGGAGAAGAATGTAAAAACGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1

Protein Analysis

482

Amino Acids

52.35

Weight (kDa)

5.4

Isoelectric Point (pI)

41.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	62 - 141	4.5e-22	SWIRM domain
Myb_DNA-binding	PF00249	238 - 277	4e-08	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	391 - 466	2.5e-06	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33610
fragaria_vesca	FvH4_3g02280
malus_domestica	MD00G1206800.v1.1 MD05G1344100.v1.1 MD10G1320100.v1.1
prunus_persica	Prupe.4G022300_v2.0.a1 Prupe.5G005400_v2.0.a1
pyrus_communis	pycom05g31350 pycom17g04440
rosa_chinensis	RchiOBHm_Chr5g0003401
rosa_laevigata	RLG00000031136
rosa_multiflora	Rmu_co8020548.1_g000001 Rmu_sc0002963.1_g000013 Rmu_sc0009787.1_g000018 Rmu_sc0023940.1_g000003 Rmu_sc0030755.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072600 Rroxscaffold_1G00072620
rosa_rugosa	Rorug04G0403100
rosa_samantha	Rh5AG029700 Rh5BG029100 Rh5CG031900 Rh5DG029600
rosa_wichuraiana	Rw5G002780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	866
AasI	GACNNNNNNGTC	1 cut(s)	149
AatII	GACGTC	2 cut(s)	153, 369
AbsI	CCTCGAGG	1 cut(s)	398
Acc16I	TGCGCA	1 cut(s)	783
Acc36I	ACCTGC	3 cut(s)	560, 866, 1009
AccB1I	GGYRCC	1 cut(s)	524
AccBSI	CCGCTC	1 cut(s)	110
AccII	CGCG	4 cut(s)	130, 434, 639, 1412
AclWI	GGATC	2 cut(s)	70, 1267
AcsI	RAATTY	3 cut(s)	848, 860, 1198
AcyI	GRCGYC	3 cut(s)	144, 150, 366
AfaI	GTAC	2 cut(s)	916, 1260
AfeI	AGCGCT	1 cut(s)	1056
AfiI	CCNNNNNNNGG	9 cut(s)	208, 381, 453, 454, 521, 546, 675, 979, 1297
AflIII	ACRYGT	1 cut(s)	787
AjiI	CACGTC	1 cut(s)	160
AluBI	AGCT	6 cut(s)	168, 177, 328, 1004, 1184, 1207
AluI	AGCT	6 cut(s)	168, 177, 328, 1004, 1184, 1207
Alw26I	GTCTC	5 cut(s)	86, 357, 930, 950, 1143
AlwI	GGATC	2 cut(s)	70, 1267
AlwNI	CAGNNNCTG	1 cut(s)	1031
Ama87I	CYCGRG	3 cut(s)	89, 224, 398
Aor51HI	AGCGCT	1 cut(s)	1056
AoxI	GGCC	5 cut(s)	18, 342, 477, 744, 990
ApeKI	GCWGC	7 cut(s)	471, 561, 576, 1031, 1034, 1043, 1181
ApoI	RAATTY	3 cut(s)	848, 860, 1198
AspLEI	GCGC	4 cut(s)	436, 506, 784, 1057
AspS9I	GGNCC	7 cut(s)	19, 190, 211, 243, 343, 549, 745
AsuC2I	CCSGG	2 cut(s)	1166, 1246
AsuHPI	GGTGA	5 cut(s)	322, 854, 890, 914, 920
AsuII	TTCGAA	1 cut(s)	1109
AvaI	CYCGRG	3 cut(s)	89, 224, 398
AvaII	GGWCC	4 cut(s)	190, 211, 243, 549
BanI	GGYRCC	1 cut(s)	524
BanII	GRGCYC	1 cut(s)	539
BbvI	GCAGC	7 cut(s)	483, 548, 588, 1018, 1021, 1030, 1193
BccI	CCATC	7 cut(s)	55, 126, 296, 694, 899, 905, 1309
BceAI	ACGGC	1 cut(s)	293
BcgI	CGANNNNNNTGC	4 cut(s)	271, 305, 337, 371
BclI	TGATCA	1 cut(s)	414
BcnI	CCSGG	2 cut(s)	1166, 1246
BcoDI	GTCTC	5 cut(s)	86, 357, 930, 950, 1143
BfaI	CTAG	2 cut(s)	261, 740
BfoI	RGCGCY	2 cut(s)	507, 1058
BfuAI	ACCTGC	3 cut(s)	560, 866, 1009
Bme1390I	CCNGG	2 cut(s)	1166, 1246
Bme18I	GGWCC	4 cut(s)	190, 211, 243, 549
BmeT110I	CYCGRG	3 cut(s)	89, 224, 398
BmgBI	CACGTC	1 cut(s)	160
BmgT120I	GGNCC	7 cut(s)	19, 190, 211, 243, 343, 549, 745
BmiI	GGNNCC	3 cut(s)	245, 373, 526
BmrFI	CCNGG	2 cut(s)	1166, 1246
BmrI	ACTGGG	1 cut(s)	1184
BmsI	GCATC	6 cut(s)	742, 871, 952, 1123, 1159, 1183
BmuI	ACTGGG	1 cut(s)	1184
BpmI	CTGGAG	2 cut(s)	790, 1358
Bpu10I	CCTNAGC	1 cut(s)	984
Bpu14I	TTCGAA	1 cut(s)	1109
BpuEI	CTTGAG	3 cut(s)	434, 812, 1229
BpuMI	CCSGG	2 cut(s)	1166, 1246
BsaHI	GRCGYC	3 cut(s)	144, 150, 366
BsaJI	CCNNGG	2 cut(s)	528, 1410
BsaXI	ACNNNNNCTCC	8 cut(s)	17, 47, 94, 124, 356, 386, 1310, 1340
Bsc4I	CCNNNNNNNGG	9 cut(s)	208, 381, 453, 454, 521, 546, 675, 979, 1297
Bse118I	RCCGGY	2 cut(s)	482, 518
Bse1I	ACTGG	3 cut(s)	773, 1179, 1341
Bse3DI	GCAATG	2 cut(s)	562, 579
BseDI	CCNNGG	2 cut(s)	528, 1410
BseGI	GGATG	7 cut(s)	47, 118, 153, 195, 967, 1174, 1231
BseLI	CCNNNNNNNGG	9 cut(s)	208, 381, 453, 454, 521, 546, 675, 979, 1297
BseMI	GCAATG	2 cut(s)	562, 579
BseMII	CTCAG	1 cut(s)	998
BseNI	ACTGG	3 cut(s)	773, 1179, 1341
BseRI	GAGGAG	4 cut(s)	22, 25, 57, 1436
BseXI	GCAGC	7 cut(s)	483, 548, 588, 1018, 1021, 1030, 1193
BseYI	CCCAGC	2 cut(s)	164, 711
BsgI	GTGCAG	1 cut(s)	1037
Bsh1236I	CGCG	4 cut(s)	130, 434, 639, 1412
BshFI	GGCC	5 cut(s)	20, 344, 479, 746, 992
BshNI	GGYRCC	1 cut(s)	524
BsiHKCI	CYCGRG	3 cut(s)	89, 224, 398
BsiSI	CCGG	5 cut(s)	188, 483, 519, 1166, 1245
BslFI	GGGAC	3 cut(s)	117, 146, 229
BslI	CCNNNNNNNGG	9 cut(s)	208, 381, 453, 454, 521, 546, 675, 979, 1297
BsmAI	GTCTC	5 cut(s)	86, 357, 930, 950, 1143
BsmBI	CGTCTC	3 cut(s)	930, 950, 1143
BsmFI	GGGAC	3 cut(s)	117, 146, 229
BsmI	GAATGC	2 cut(s)	945, 1117
BsnI	GGCC	5 cut(s)	20, 344, 479, 746, 992
BsoBI	CYCGRG	3 cut(s)	89, 224, 398
Bsp119I	TTCGAA	1 cut(s)	1109
Bsp1286I	GDGCHC	1 cut(s)	539
Bsp143I	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
BspANI	GGCC	5 cut(s)	20, 344, 479, 746, 992
BspCNI	CTCAG	1 cut(s)	997
BspFNI	CGCG	4 cut(s)	130, 434, 639, 1412
BspLI	GGNNCC	3 cut(s)	245, 373, 526
BspMI	ACCTGC	3 cut(s)	560, 866, 1009
BspPI	GGATC	2 cut(s)	70, 1267
BspQI	GCTCTTC	1 cut(s)	1228
BspT104I	TTCGAA	1 cut(s)	1109
BspT107I	GGYRCC	1 cut(s)	524
BsrBI	CCGCTC	1 cut(s)	110
BsrDI	GCAATG	2 cut(s)	562, 579
BsrFI	RCCGGY	2 cut(s)	482, 518
BsrI	ACTGG	3 cut(s)	773, 1179, 1341
BssAI	RCCGGY	2 cut(s)	482, 518
BssECI	CCNNGG	2 cut(s)	528, 1410
BssMI	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
BssNI	GRCGYC	3 cut(s)	144, 150, 366
BssT1I	CCWWGG	1 cut(s)	528
Bst4CI	ACNGT	1 cut(s)	924
Bst6I	CTCTTC	4 cut(s)	75, 539, 690, 1228
BstACI	GRCGYC	3 cut(s)	144, 150, 366
BstAPI	GCANNNNNTGC	4 cut(s)	561, 585, 881, 1031
BstBI	TTCGAA	1 cut(s)	1109
BstC8I	GCNNGC	7 cut(s)	346, 520, 586, 967, 1012, 1016, 1355
BstDEI	CTNAG	2 cut(s)	929, 984
BstDSI	CCRYGG	1 cut(s)	1410
BstF5I	GGATG	7 cut(s)	47, 118, 153, 195, 967, 1174, 1231
BstFNI	CGCG	4 cut(s)	130, 434, 639, 1412
BstH2I	RGCGCY	2 cut(s)	507, 1058
BstHHI	GCGC	4 cut(s)	436, 506, 784, 1057
BstKTI	GATC	6 cut(s)	78, 417, 654, 690, 1275, 1369
BstMAI	GTCTC	5 cut(s)	86, 357, 930, 950, 1143
BstMBI	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
BstNSI	RCATGY	2 cut(s)	791, 1357
BstSCI	CCNGG	2 cut(s)	1164, 1244
BstUI	CGCG	4 cut(s)	130, 434, 639, 1412
BstV1I	GCAGC	7 cut(s)	483, 548, 588, 1018, 1021, 1030, 1193
BstX2I	RGATCY	1 cut(s)	1272
BstYI	RGATCY	1 cut(s)	1272
BsuRI	GGCC	5 cut(s)	20, 344, 479, 746, 992
BtgI	CCRYGG	1 cut(s)	1410
BtrI	CACGTC	1 cut(s)	160
BtsCI	GGATG	7 cut(s)	47, 118, 153, 195, 967, 1174, 1231
BtsI	GCAGTG	1 cut(s)	202
BtsIMutI	CAGTG	2 cut(s)	202, 1172
BveI	ACCTGC	3 cut(s)	560, 866, 1009
Cac8I	GCNNGC	7 cut(s)	346, 520, 586, 967, 1012, 1016, 1355
CaiI	CAGNNNCTG	1 cut(s)	1031
CfoI	GCGC	4 cut(s)	436, 506, 784, 1057
Cfr10I	RCCGGY	2 cut(s)	482, 518
Cfr13I	GGNCC	7 cut(s)	19, 190, 211, 243, 343, 549, 745
Cfr42I	CCGCGG	1 cut(s)	1413
CseI	GACGC	3 cut(s)	119, 152, 932
Csp6I	GTAC	2 cut(s)	915, 1259
CviAII	CATG	4 cut(s)	610, 788, 1124, 1354
CviQI	GTAC	2 cut(s)	915, 1259
DdeI	CTNAG	2 cut(s)	929, 984
DpnI	GATC	6 cut(s)	77, 416, 653, 689, 1274, 1368
DpnII	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
Eam1104I	CTCTTC	4 cut(s)	75, 539, 690, 1228
EarI	CTCTTC	4 cut(s)	75, 539, 690, 1228
EciI	GGCGGA	2 cut(s)	1082, 1433
Eco130I	CCWWGG	1 cut(s)	528
Eco24I	GRGCYC	1 cut(s)	539
Eco47I	GGWCC	4 cut(s)	190, 211, 243, 549
Eco47III	AGCGCT	1 cut(s)	1056
Eco88I	CYCGRG	3 cut(s)	89, 224, 398
EcoO109I	RGGNCCY	2 cut(s)	549, 745
EcoRI	GAATTC	1 cut(s)	1198
EcoT14I	CCWWGG	1 cut(s)	528
EcoT22I	ATGCAT	1 cut(s)	756
EcoT38I	GRGCYC	1 cut(s)	539
ErhI	CCWWGG	1 cut(s)	528
Esp3I	CGTCTC	3 cut(s)	930, 950, 1143
FaeI	CATG	4 cut(s)	613, 791, 1127, 1357
FalI	AAGNNNNNCTT	2 cut(s)	317, 349
FaqI	GGGAC	3 cut(s)	117, 146, 229
FatI	CATG	4 cut(s)	609, 787, 1123, 1353
FauI	CCCGC	6 cut(s)	88, 122, 353, 523, 672, 1003
FbaI	TGATCA	1 cut(s)	414
FokI	GGATG	7 cut(s)	34, 105, 140, 182, 974, 1181, 1238
FriOI	GRGCYC	1 cut(s)	539
FspBI	CTAG	2 cut(s)	261, 740
FspI	TGCGCA	1 cut(s)	783
GlaI	GCGC	4 cut(s)	435, 505, 783, 1056
GsaI	CCCAGC	2 cut(s)	168, 715
GsuI	CTGGAG	2 cut(s)	790, 1358
HaeII	RGCGCY	2 cut(s)	507, 1058
HaeIII	GGCC	5 cut(s)	20, 344, 479, 746, 992
HapII	CCGG	5 cut(s)	188, 483, 519, 1166, 1245
HgaI	GACGC	3 cut(s)	119, 152, 932
HhaI	GCGC	4 cut(s)	436, 506, 784, 1057
Hin1I	GRCGYC	3 cut(s)	144, 150, 366
Hin1II	CATG	4 cut(s)	613, 791, 1127, 1357
Hin6I	GCGC	4 cut(s)	434, 504, 782, 1055
HinP1I	GCGC	4 cut(s)	434, 504, 782, 1055
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HinfI	GANTC	6 cut(s)	94, 216, 236, 509, 613, 832
HpaII	CCGG	5 cut(s)	188, 483, 519, 1166, 1245
HphI	GGTGA	5 cut(s)	322, 854, 890, 914, 920
Hpy166II	GTNNAC	1 cut(s)	313
Hpy188III	TCNNGA	4 cut(s)	89, 303, 740, 829
Hpy8I	GTNNAC	1 cut(s)	313
Hpy99I	CGWCG	7 cut(s)	146, 152, 296, 362, 368, 371, 767
HpyAV	CCTTC	8 cut(s)	258, 327, 343, 438, 769, 799, 1207, 1211
HpyCH4III	ACNGT	1 cut(s)	924
HpyCH4IV	ACGT	3 cut(s)	150, 159, 366
HpyF3I	CTNAG	2 cut(s)	929, 984
HpySE526I	ACGT	3 cut(s)	150, 159, 366
Hsp92I	GRCGYC	3 cut(s)	144, 150, 366
Hsp92II	CATG	4 cut(s)	613, 791, 1127, 1357
HspAI	GCGC	4 cut(s)	434, 504, 782, 1055
KroI	GCCGGC	1 cut(s)	518
KroNI	GCCGGC	1 cut(s)	520
Ksp22I	TGATCA	1 cut(s)	414
KspI	CCGCGG	1 cut(s)	1413
Kzo9I	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
LguI	GCTCTTC	1 cut(s)	1228
LmnI	GCTCC	3 cut(s)	115, 377, 1339
Lsp1109I	GCAGC	7 cut(s)	483, 548, 588, 1018, 1021, 1030, 1193
LweI	GCATC	6 cut(s)	742, 871, 952, 1123, 1159, 1183
MaeI	CTAG	2 cut(s)	261, 740
MaeII	ACGT	3 cut(s)	150, 159, 366
MaeIII	GTNAC	2 cut(s)	1048, 1093
MalI	GATC	6 cut(s)	77, 416, 653, 689, 1274, 1368
MbiI	CCGCTC	1 cut(s)	110
MboI	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
MboII	GAAGA	9 cut(s)	62, 223, 556, 657, 707, 728, 1245, 1294, 1438
MflI	RGATCY	1 cut(s)	1272
MhlI	GDGCHC	1 cut(s)	539
MluCI	AATT	6 cut(s)	418, 848, 860, 975, 1139, 1198
MlyI	GAGTC	2 cut(s)	88, 607
MmeI	TCCRAC	3 cut(s)	63, 122, 165
Mph1103I	ATGCAT	1 cut(s)	756
MreI	CGCCGGCG	1 cut(s)	518
MroNI	GCCGGC	1 cut(s)	518
MseI	TTAA	2 cut(s)	1142, 1385
MspA1I	CMGCKG	3 cut(s)	17, 177, 1412
MspI	CCGG	5 cut(s)	188, 483, 519, 1166, 1245
MspR9I	CCNGG	2 cut(s)	1166, 1246
Mva1269I	GAATGC	2 cut(s)	945, 1117
MvnI	CGCG	4 cut(s)	130, 434, 639, 1412
NaeI	GCCGGC	1 cut(s)	520
NciI	CCSGG	2 cut(s)	1166, 1246
NdeII	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
NgoMIV	GCCGGC	1 cut(s)	518
NlaIII	CATG	4 cut(s)	613, 791, 1127, 1357
NlaIV	GGNNCC	3 cut(s)	245, 373, 526
NsbI	TGCGCA	1 cut(s)	783
NsiI	ATGCAT	1 cut(s)	756
NspI	RCATGY	2 cut(s)	791, 1357
NspV	TTCGAA	1 cut(s)	1109
PaeI	GCATGC	1 cut(s)	1357
PaeR7I	CTCGAG	1 cut(s)	398
PaqCI	CACCTGC	1 cut(s)	866
PciI	ACATGT	1 cut(s)	787
PciSI	GCTCTTC	1 cut(s)	1228
PcsI	WCGNNNNNNNCGW	5 cut(s)	156, 363, 372, 396, 798
PctI	GAATGC	2 cut(s)	945, 1117
PdiI	GCCGGC	1 cut(s)	520
PfeI	GAWTC	4 cut(s)	216, 236, 509, 832
PfoI	TCCNGGA	1 cut(s)	1244
PleI	GAGTC	2 cut(s)	88, 607
PpsI	GAGTC	2 cut(s)	88, 607
PpuMI	RGGWCCY	1 cut(s)	549
PscI	ACATGT	1 cut(s)	787
Psp5II	RGGWCCY	1 cut(s)	549
PspFI	CCCAGC	2 cut(s)	164, 711
PspN4I	GGNNCC	3 cut(s)	245, 373, 526
PspPI	GGNCC	7 cut(s)	19, 190, 211, 243, 343, 549, 745
PspPPI	RGGWCCY	1 cut(s)	549
PspXI	VCTCGAGB	1 cut(s)	398
PstNI	CAGNNNCTG	1 cut(s)	1031
PsuI	RGATCY	1 cut(s)	1272
PvuII	CAGCTG	1 cut(s)	177
RsaI	GTAC	2 cut(s)	916, 1260
RsaNI	GTAC	2 cut(s)	915, 1259
SacII	CCGCGG	1 cut(s)	1413
SapI	GCTCTTC	1 cut(s)	1228
SaqAI	TTAA	2 cut(s)	1142, 1385
Sau3AI	GATC	6 cut(s)	75, 414, 651, 687, 1272, 1366
Sau96I	GGNCC	7 cut(s)	19, 190, 211, 243, 343, 549, 745
SchI	GAGTC	2 cut(s)	88, 607
ScrFI	CCNGG	2 cut(s)	1166, 1246
SduI	GDGCHC	1 cut(s)	539
SfaNI	GCATC	6 cut(s)	742, 871, 952, 1123, 1159, 1183
Sfr274I	CTCGAG	1 cut(s)	398
Sfr303I	CCGCGG	1 cut(s)	1413
SfuI	TTCGAA	1 cut(s)	1109
SgrAI	CRCCGGYG	2 cut(s)	482, 518
SgrBI	CCGCGG	1 cut(s)	1413
SinI	GGWCC	4 cut(s)	190, 211, 243, 549
SlaI	CTCGAG	1 cut(s)	398
SmlI	CTYRAG	4 cut(s)	398, 449, 827, 1208
SmoI	CTYRAG	4 cut(s)	398, 449, 827, 1208
SphI	GCATGC	1 cut(s)	1357
Sse9I	AATT	6 cut(s)	418, 848, 860, 975, 1139, 1198
SspMI	CTAG	2 cut(s)	261, 740
StyD4I	CCNGG	2 cut(s)	1164, 1244
StyI	CCWWGG	1 cut(s)	528
TaaI	ACNGT	1 cut(s)	924
TaiI	ACGT	3 cut(s)	153, 162, 369
TaqI	TCGA	6 cut(s)	234, 390, 399, 1109, 1296, 1365
TaqII	GACCGA	1 cut(s)	231
TasI	AATT	6 cut(s)	418, 848, 860, 975, 1139, 1198
TauI	GCSGC	6 cut(s)	20, 110, 482, 992, 1415, 1418
TfiI	GAWTC	4 cut(s)	216, 236, 509, 832
Tru1I	TTAA	2 cut(s)	1142, 1385
Tru9I	TTAA	2 cut(s)	1142, 1385
TscAI	CASTG	2 cut(s)	209, 1179
TseI	GCWGC	7 cut(s)	471, 561, 576, 1031, 1034, 1043, 1181
TspDTI	ATGAA	4 cut(s)	708, 1089, 1140, 1361
TspGWI	ACGGA	4 cut(s)	353, 364, 1161, 1280
TspRI	CASTG	2 cut(s)	209, 1179
VpaK11BI	GGWCC	4 cut(s)	190, 211, 243, 549
XapI	RAATTY	3 cut(s)	848, 860, 1198
XbaI	TCTAGA	1 cut(s)	739
XceI	RCATGY	2 cut(s)	791, 1357
XhoI	CTCGAG	1 cut(s)	398
XspI	CTAG	2 cut(s)	261, 740
ZraI	GACGTC	2 cut(s)	151, 367
Zsp2I	ATGCAT	1 cut(s)	756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.