Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007808

Physical Location & Seq

Genomic Coordinates Reverse (-)

93614260 .. 93616252

Gene Structure 1993 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00072600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGACTACCAAATCCATCCAAGAGCTTCTCAATCTTCTCAATCCTCCTCCCTCCTCCTCCTCCTCCTCCCCCGCCGTCAAGCCGGAGATTCCGGCCACTCCGGCCACCGGCGCACGCCCTCCTCCACCGCCGCCGACCTCCGACGCCGACACCATCTTCATCCCCAGCTACTCCAGCTGGTTCTCCTTCGACCGCATCTACCAAACCGAGCGCCGATCCCTCCCGGAATTCTTCAACTCCCGCTCGCCGGCCAAAAACCCTAACCTCTACAAGTACTACCGCAACCACATCATCAAGCACTACCGCTCCAACCCCGGCCGCCGCCTCACTTTCACCGACGTCCGCAAAACCCTAGTCGGCGACGTCGGCTCCATCCACAGGGTCTTCAATTTCCTCGAGGCTTGGGGTTTGATCAATTACGCCCCCTCGATCAAGTCGCTGAAATGGGAGGAGAAGGACGCGAAGTCCGCCGCGGCGCACGGCGGCGGCGCTCAGTCACCGAAGCCCGGTCCAAAAGACGCTTCTGCCCCTAACAAGGACAAGAAGAGGACCTGCAATGGCTGCAAGTCTCTCTGCAGCATTGCCTGCTTTGTTTCCGAAAAGTATGATATGACTCTATGTGCTAGATGTTATGTTCGTGGGAACTATCAGATTGGTGTGAATTCTTCGGATTTTAGAAGGGTTGAAATTAATGAAGAAACTGGGGATGGTTGGGCAGATAGAGACACATTGCATTTGCTAGAAGCACTCATGCATTATGGTGATGATTGGGGGAAGGTCGCACAACATGTTGGTAGAAGCGAGAAGGAATGTGTGGCTCACTTCTTGAAGCTTCCTTTTGCTGATAAACCGATAGATGATTTGGATTCCGAGAAGTTGGATGGTAGTGGTGGTGTGAGTCCGTTGAAGAAGGGGAATGGGGATGATGAGGTTGGTTTGGAGAGTAAGAGGATGCGTCTCACGCCTCTTGCGGATGCCAGCAACCCGATTATGGCTCAGACTGCGTTTCTGTCTGCTTTGGCAGGTGTAAAGGCTGCAGAAGCTGCTGCTCGTGCTGCTGTGACAACCCTGTGCGAGGCGGATTATGAAACAAGTAGGATGAGTGTTGGACCTCGAGGGGTGAGTGGGGGTGATGCTGTGTTGAATGGAGACACTGAAGCTAGACTGAATGCAATGGGAGGCGCTTTTGTGGATGCGAATTCGGAGCTGGAGAAGGAAGGGCTGGGTGTGGAGAGAGCAATTTCTGGGATTACAGAGGTTCAGATGAAAGAGATTCAAGATAGGATTGTTCGTTTCGAGGAATTAGATTTGCAGTTGGAGAAAGAAAAGCAACAACTGGAGCAAATGAAATCAATGCTGTTTGTGGATCAGCTTACGCTTTTGTCTCATAAGAGATCTGCACCTAAAACCAAAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1

Protein Analysis

472

Amino Acids

51.82

Weight (kDa)

7.11

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	62 - 140	8e-24	SWIRM domain
Myb_DNA-binding	PF00249	238 - 278	1.9e-07	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	408 - 469	5.2e-07	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33610
fragaria_vesca	FvH4_3g02280
malus_domestica	MD00G1206800.v1.1 MD05G1344100.v1.1 MD10G1320100.v1.1
prunus_persica	Prupe.4G022300_v2.0.a1 Prupe.5G005400_v2.0.a1
pyrus_communis	pycom05g31350 pycom17g04440
rosa_chinensis	RchiOBHm_Chr5g0003401
rosa_laevigata	RLG00000031136
rosa_multiflora	Rmu_co8020548.1_g000001 Rmu_sc0002963.1_g000013 Rmu_sc0009787.1_g000018 Rmu_sc0023940.1_g000003 Rmu_sc0030755.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072600 Rroxscaffold_1G00072620
rosa_rugosa	Rorug04G0403100
rosa_samantha	Rh5AG029700 Rh5BG029100 Rh5CG031900 Rh5DG029600
rosa_wichuraiana	Rw5G002780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1013
AatII	GACGTC	2 cut(s)	342, 366
AbsI	CCTCGAGG	2 cut(s)	395, 1113
Acc36I	ACCTGC	2 cut(s)	560, 1013
AccBSI	CCGCTC	2 cut(s)	243, 306
AccII	CGCG	2 cut(s)	461, 473
AclWI	GGATC	2 cut(s)	210, 1374
AcoI	YGGCCR	4 cut(s)	93, 102, 249, 316
AcsI	RAATTY	3 cut(s)	227, 661, 1198
AcuI	CTGAAG	1 cut(s)	1176
AcyI	GRCGYC	3 cut(s)	144, 339, 363
AfaI	GTAC	1 cut(s)	275
AfiI	CCNNNNNNNGG	7 cut(s)	107, 247, 378, 506, 535, 991, 1075
AflIII	ACRYGT	1 cut(s)	787
AgsI	TTSAA	7 cut(s)	235, 388, 686, 829, 907, 1144, 1277
AhdI	GACNNNNNGTC	1 cut(s)	463
AjuI	GAANNNNNNNTTGG	2 cut(s)	505, 537
AluBI	AGCT	9 cut(s)	25, 168, 177, 832, 1043, 1160, 1207, 1372, 1416
AluI	AGCT	9 cut(s)	25, 168, 177, 832, 1043, 1160, 1207, 1372, 1416
Alw26I	GTCTC	5 cut(s)	573, 717, 962, 1143, 1389
AlwI	GGATC	2 cut(s)	210, 1374
AlwNI	CAGNNNCTG	1 cut(s)	1043
Ama87I	CYCGRG	2 cut(s)	395, 1113
AoxI	GGCC	4 cut(s)	93, 102, 249, 316
ApeKI	GCWGC	6 cut(s)	561, 576, 1034, 1043, 1046, 1055
ApoI	RAATTY	3 cut(s)	227, 661, 1198
ArsI	GACNNNNNNTTYG	2 cut(s)	339, 371
AseI	ATTAAT	1 cut(s)	690
AspLEI	GCGC	5 cut(s)	113, 213, 478, 491, 1184
AspS9I	GGNCC	3 cut(s)	509, 549, 1109
AsuC2I	CCSGG	3 cut(s)	224, 315, 507
AsuHPI	GGTGA	5 cut(s)	325, 489, 773, 1132, 1142
AvaI	CYCGRG	2 cut(s)	395, 1113
AvaII	GGWCC	3 cut(s)	509, 549, 1109
BauI	CACGAG	1 cut(s)	1050
BbsI	GAAGAC	1 cut(s)	376
BbvI	GCAGC	6 cut(s)	548, 588, 1021, 1030, 1033, 1042
BccI	CCATC	5 cut(s)	23, 161, 380, 701, 875
BceAI	ACGGC	2 cut(s)	59, 496
BclI	TGATCA	1 cut(s)	411
BcnI	CCSGG	3 cut(s)	224, 315, 507
BcoDI	GTCTC	5 cut(s)	573, 717, 962, 1143, 1389
BfaI	CTAG	5 cut(s)	353, 624, 740, 1161, 1417
BfmI	CTRYAG	2 cut(s)	574, 1035
BfoI	RGCGCY	3 cut(s)	214, 492, 1185
BfuAI	ACCTGC	2 cut(s)	560, 1013
BglI	GCCNNNNNGGC	1 cut(s)	101
BglII	AGATCT	1 cut(s)	1394
BmcAI	AGTACT	1 cut(s)	275
Bme1390I	CCNGG	3 cut(s)	224, 315, 507
Bme18I	GGWCC	3 cut(s)	509, 549, 1109
BmeRI	GACNNNNNGTC	1 cut(s)	463
BmeT110I	CYCGRG	2 cut(s)	395, 1113
BmgT120I	GGNCC	3 cut(s)	509, 549, 1109
BmiI	GGNNCC	1 cut(s)	370
BmrFI	CCNGG	3 cut(s)	224, 315, 507
BmrI	ACTGGG	1 cut(s)	711
BmsI	GCATC	5 cut(s)	204, 942, 964, 1123, 1183
BmuI	ACTGGG	1 cut(s)	711
BpiI	GAAGAC	1 cut(s)	376
BpmI	CTGGAG	3 cut(s)	157, 1229, 1358
BpuMI	CCSGG	3 cut(s)	224, 315, 507
BsaHI	GRCGYC	3 cut(s)	144, 339, 363
BsaJI	CCNNGG	2 cut(s)	313, 471
BsaXI	ACNNNNNCTCC	4 cut(s)	290, 320, 353, 383
Bsc4I	CCNNNNNNNGG	7 cut(s)	107, 247, 378, 506, 535, 991, 1075
Bse118I	RCCGGY	2 cut(s)	107, 247
Bse1I	ACTGG	2 cut(s)	706, 1341
Bse3DI	GCAATG	4 cut(s)	562, 579, 728, 1179
BseDI	CCNNGG	2 cut(s)	313, 471
BseLI	CCNNNNNNNGG	7 cut(s)	107, 247, 378, 506, 535, 991, 1075
BseMI	GCAATG	4 cut(s)	562, 579, 728, 1179
BseMII	CTCAG	2 cut(s)	506, 1010
BseNI	ACTGG	2 cut(s)	706, 1341
BseRI	GAGGAG	8 cut(s)	36, 43, 46, 49, 52, 55, 111, 464
BseX3I	CGGCCG	1 cut(s)	316
BseXI	GCAGC	6 cut(s)	548, 588, 1021, 1030, 1033, 1042
BseYI	CCCAGC	2 cut(s)	164, 1222
BsgI	GTGCAG	1 cut(s)	1383
Bsh1236I	CGCG	2 cut(s)	461, 473
Bsh1285I	CGRYCG	2 cut(s)	193, 319
BshFI	GGCC	4 cut(s)	95, 104, 251, 318
BsiEI	CGRYCG	2 cut(s)	193, 319
BsiHKCI	CYCGRG	2 cut(s)	395, 1113
BsiSI	CCGG	8 cut(s)	83, 92, 101, 108, 224, 248, 315, 507
BslI	CCNNNNNNNGG	7 cut(s)	107, 247, 378, 506, 535, 991, 1075
BsmAI	GTCTC	5 cut(s)	573, 717, 962, 1143, 1389
BsmBI	CGTCTC	1 cut(s)	962
BsmI	GAATGC	1 cut(s)	1174
BsnI	GGCC	4 cut(s)	95, 104, 251, 318
BsoBI	CYCGRG	2 cut(s)	395, 1113
Bsp143I	GATC	5 cut(s)	215, 411, 429, 1366, 1394
BspANI	GGCC	4 cut(s)	95, 104, 251, 318
BspCNI	CTCAG	2 cut(s)	505, 1009
BspFNI	CGCG	2 cut(s)	461, 473
BspLI	GGNNCC	1 cut(s)	370
BspMAI	CTGCAG	2 cut(s)	578, 1039
BspMI	ACCTGC	2 cut(s)	560, 1013
BspPI	GGATC	2 cut(s)	210, 1374
BsrBI	CCGCTC	2 cut(s)	243, 306
BsrDI	GCAATG	4 cut(s)	562, 579, 728, 1179
BsrFI	RCCGGY	2 cut(s)	107, 247
BsrI	ACTGG	2 cut(s)	706, 1341
BssAI	RCCGGY	2 cut(s)	107, 247
BssECI	CCNNGG	2 cut(s)	313, 471
BssMI	GATC	5 cut(s)	215, 411, 429, 1366, 1394
BssNI	GRCGYC	3 cut(s)	144, 339, 363
BssSI	CACGAG	1 cut(s)	1050
Bst2BI	CACGAG	1 cut(s)	1050
Bst6I	CTCTTC	1 cut(s)	539
BstACI	GRCGYC	3 cut(s)	144, 339, 363
BstAPI	GCANNNNNTGC	3 cut(s)	561, 585, 1043
BstC8I	GCNNGC	5 cut(s)	115, 245, 249, 586, 979
BstDEI	CTNAG	2 cut(s)	492, 996
BstDSI	CCRYGG	1 cut(s)	471
BstENI	CCTNNNNNAGG	1 cut(s)	1073
BstFNI	CGCG	2 cut(s)	461, 473
BstH2I	RGCGCY	3 cut(s)	214, 492, 1185
BstHHI	GCGC	5 cut(s)	113, 213, 478, 491, 1184
BstKTI	GATC	5 cut(s)	218, 414, 432, 1369, 1397
BstMAI	GTCTC	5 cut(s)	573, 717, 962, 1143, 1389
BstMBI	GATC	5 cut(s)	215, 411, 429, 1366, 1394
BstMCI	CGRYCG	2 cut(s)	193, 319
BstNSI	RCATGY	1 cut(s)	791
BstSCI	CCNGG	3 cut(s)	222, 313, 505
BstSFI	CTRYAG	2 cut(s)	574, 1035
BstUI	CGCG	2 cut(s)	461, 473
BstV1I	GCAGC	6 cut(s)	548, 588, 1021, 1030, 1033, 1042
BstV2I	GAAGAC	1 cut(s)	376
BstX2I	RGATCY	1 cut(s)	1394
BstYI	RGATCY	1 cut(s)	1394
BstZI	CGGCCG	1 cut(s)	316
BsuRI	GGCC	4 cut(s)	95, 104, 251, 318
BtgI	CCRYGG	1 cut(s)	471
BtsIMutI	CAGTG	1 cut(s)	1152
BveI	ACCTGC	2 cut(s)	560, 1013
Cac8I	GCNNGC	5 cut(s)	115, 245, 249, 586, 979
CaiI	CAGNNNCTG	1 cut(s)	1043
CfoI	GCGC	5 cut(s)	113, 213, 478, 491, 1184
Cfr10I	RCCGGY	2 cut(s)	107, 247
Cfr13I	GGNCC	3 cut(s)	509, 549, 1109
Cfr42I	CCGCGG	1 cut(s)	474
CseI	GACGC	4 cut(s)	152, 467, 527, 944
Csp6I	GTAC	1 cut(s)	274
CviAII	CATG	2 cut(s)	751, 788
CviQI	GTAC	1 cut(s)	274
DdeI	CTNAG	2 cut(s)	492, 996
DpnI	GATC	5 cut(s)	217, 413, 431, 1368, 1396
DpnII	GATC	5 cut(s)	215, 411, 429, 1366, 1394
DriI	GACNNNNNGTC	1 cut(s)	463
EaeI	YGGCCR	4 cut(s)	93, 102, 249, 316
EagI	CGGCCG	1 cut(s)	316
Eam1104I	CTCTTC	1 cut(s)	539
Eam1105I	GACNNNNNGTC	1 cut(s)	463
EarI	CTCTTC	1 cut(s)	539
EciI	GGCGGA	2 cut(s)	457, 1094
EclXI	CGGCCG	1 cut(s)	316
Eco47I	GGWCC	3 cut(s)	509, 549, 1109
Eco52I	CGGCCG	1 cut(s)	316
Eco57I	CTGAAG	1 cut(s)	1176
Eco88I	CYCGRG	2 cut(s)	395, 1113
EcoNI	CCTNNNNNAGG	1 cut(s)	1073
EcoO109I	RGGNCCY	1 cut(s)	549
EcoRI	GAATTC	3 cut(s)	227, 661, 1198
EcoT22I	ATGCAT	1 cut(s)	756
Esp3I	CGTCTC	1 cut(s)	962
FaeI	CATG	2 cut(s)	754, 791
FatI	CATG	2 cut(s)	750, 787
FauI	CCCGC	2 cut(s)	79, 248
FbaI	TGATCA	1 cut(s)	411
FspBI	CTAG	5 cut(s)	353, 624, 740, 1161, 1417
GlaI	GCGC	5 cut(s)	112, 212, 477, 490, 1183
GsaI	CCCAGC	2 cut(s)	168, 1226
GsuI	CTGGAG	3 cut(s)	157, 1229, 1358
HaeII	RGCGCY	3 cut(s)	214, 492, 1185
HaeIII	GGCC	4 cut(s)	95, 104, 251, 318
HapII	CCGG	8 cut(s)	83, 92, 101, 108, 224, 248, 315, 507
HgaI	GACGC	4 cut(s)	152, 467, 527, 944
HhaI	GCGC	5 cut(s)	113, 213, 478, 491, 1184
Hin1I	GRCGYC	3 cut(s)	144, 339, 363
Hin1II	CATG	2 cut(s)	754, 791
Hin6I	GCGC	5 cut(s)	111, 211, 476, 489, 1182
HinP1I	GCGC	5 cut(s)	111, 211, 476, 489, 1182
HindIII	AAGCTT	1 cut(s)	830
HinfI	GANTC	5 cut(s)	88, 613, 866, 898, 1273
HpaII	CCGG	8 cut(s)	83, 92, 101, 108, 224, 248, 315, 507
HphI	GGTGA	5 cut(s)	325, 489, 773, 1132, 1142
Hpy188I	TCNGA	8 cut(s)	142, 598, 651, 670, 871, 999, 1204, 1263
Hpy188III	TCNNGA	2 cut(s)	826, 1277
Hpy99I	CGWCG	4 cut(s)	146, 341, 365, 368
HpyAV	CCTTC	8 cut(s)	196, 448, 672, 769, 799, 904, 1207, 1211
HpyCH4IV	ACGT	2 cut(s)	339, 363
HpyCH4V	TGCA	9 cut(s)	555, 564, 576, 733, 754, 1037, 1172, 1312, 1400
HpyF3I	CTNAG	2 cut(s)	492, 996
HpySE526I	ACGT	2 cut(s)	339, 363
Hsp92I	GRCGYC	3 cut(s)	144, 339, 363
Hsp92II	CATG	2 cut(s)	754, 791
HspAI	GCGC	5 cut(s)	111, 211, 476, 489, 1182
KroI	GCCGGC	1 cut(s)	247
KroNI	GCCGGC	1 cut(s)	249
Ksp22I	TGATCA	1 cut(s)	411
KspI	CCGCGG	1 cut(s)	474
Kzo9I	GATC	5 cut(s)	215, 411, 429, 1366, 1394
LmnI	GCTCC	4 cut(s)	311, 374, 1204, 1339
Lsp1109I	GCAGC	6 cut(s)	548, 588, 1021, 1030, 1033, 1042
LweI	GCATC	5 cut(s)	204, 942, 964, 1123, 1183
MaeI	CTAG	5 cut(s)	353, 624, 740, 1161, 1417
MaeII	ACGT	2 cut(s)	339, 363
MaeIII	GTNAC	2 cut(s)	495, 1060
MalI	GATC	5 cut(s)	217, 413, 431, 1368, 1396
MbiI	CCGCTC	2 cut(s)	243, 306
MboI	GATC	5 cut(s)	215, 411, 429, 1366, 1394
MboII	GAAGA	8 cut(s)	26, 148, 223, 376, 556, 657, 707, 919
MflI	RGATCY	1 cut(s)	1394
MluCI	AATT	8 cut(s)	227, 388, 415, 661, 687, 1198, 1239, 1301
MlyI	GAGTC	2 cut(s)	607, 907
MmeI	TCCRAC	5 cut(s)	165, 333, 858, 1087, 1296
Mph1103I	ATGCAT	1 cut(s)	756
MroNI	GCCGGC	1 cut(s)	247
MseI	TTAA	1 cut(s)	690
MslI	CAYNNNNRTG	1 cut(s)	759
MspA1I	CMGCKG	2 cut(s)	177, 473
MspI	CCGG	8 cut(s)	83, 92, 101, 108, 224, 248, 315, 507
MspR9I	CCNGG	3 cut(s)	224, 315, 507
Mva1269I	GAATGC	1 cut(s)	1174
MvnI	CGCG	2 cut(s)	461, 473
NaeI	GCCGGC	1 cut(s)	249
NciI	CCSGG	3 cut(s)	224, 315, 507
NdeII	GATC	5 cut(s)	215, 411, 429, 1366, 1394
NgoMIV	GCCGGC	1 cut(s)	247
NlaIII	CATG	2 cut(s)	754, 791
NlaIV	GGNNCC	1 cut(s)	370
NmuCI	GTSAC	2 cut(s)	495, 1060
NsiI	ATGCAT	1 cut(s)	756
NspI	RCATGY	1 cut(s)	791
PaeR7I	CTCGAG	2 cut(s)	395, 1113
PaqCI	CACCTGC	1 cut(s)	1013
PciI	ACATGT	1 cut(s)	787
PctI	GAATGC	1 cut(s)	1174
PdiI	GCCGGC	1 cut(s)	249
PfeI	GAWTC	3 cut(s)	88, 866, 1273
PfoI	TCCNGGA	1 cut(s)	222
PleI	GAGTC	2 cut(s)	607, 906
PpsI	GAGTC	2 cut(s)	607, 906
PpuMI	RGGWCCY	1 cut(s)	549
PscI	ACATGT	1 cut(s)	787
PshBI	ATTAAT	1 cut(s)	690
Psp5II	RGGWCCY	1 cut(s)	549
PspFI	CCCAGC	2 cut(s)	164, 1222
PspN4I	GGNNCC	1 cut(s)	370
PspPI	GGNCC	3 cut(s)	509, 549, 1109
PspPPI	RGGWCCY	1 cut(s)	549
PspXI	VCTCGAGB	2 cut(s)	395, 1113
PstI	CTGCAG	2 cut(s)	578, 1039
PstNI	CAGNNNCTG	1 cut(s)	1043
PsuI	RGATCY	1 cut(s)	1394
PvuII	CAGCTG	1 cut(s)	177
RsaI	GTAC	1 cut(s)	275
RsaNI	GTAC	1 cut(s)	274
RseI	CAYNNNNRTG	1 cut(s)	759
SacII	CCGCGG	1 cut(s)	474
SaqAI	TTAA	1 cut(s)	690
Sau3AI	GATC	5 cut(s)	215, 411, 429, 1366, 1394
Sau96I	GGNCC	3 cut(s)	509, 549, 1109
ScaI	AGTACT	1 cut(s)	275
SchI	GAGTC	2 cut(s)	607, 907
ScrFI	CCNGG	3 cut(s)	224, 315, 507
SfaNI	GCATC	5 cut(s)	204, 942, 964, 1123, 1183
SfcI	CTRYAG	2 cut(s)	574, 1035
SfiI	GGCCNNNNNGGCC	1 cut(s)	101
Sfr274I	CTCGAG	2 cut(s)	395, 1113
Sfr303I	CCGCGG	1 cut(s)	474
SgrAI	CRCCGGYG	1 cut(s)	107
SgrBI	CCGCGG	1 cut(s)	474
SinI	GGWCC	3 cut(s)	509, 549, 1109
SlaI	CTCGAG	2 cut(s)	395, 1113
SmiMI	CAYNNNNRTG	1 cut(s)	759
SmlI	CTYRAG	2 cut(s)	395, 1113
SmoI	CTYRAG	2 cut(s)	395, 1113
Sse9I	AATT	8 cut(s)	227, 388, 415, 661, 687, 1198, 1239, 1301
SspMI	CTAG	5 cut(s)	353, 624, 740, 1161, 1417
StyD4I	CCNGG	3 cut(s)	222, 313, 505
TaiI	ACGT	2 cut(s)	342, 366
TaqI	TCGA	5 cut(s)	189, 396, 428, 1114, 1296
TasI	AATT	8 cut(s)	227, 388, 415, 661, 687, 1198, 1239, 1301
TatI	WGTACW	1 cut(s)	273
TauI	GCSGC	7 cut(s)	133, 321, 324, 473, 476, 486, 489
TfiI	GAWTC	3 cut(s)	88, 866, 1273
Tru1I	TTAA	1 cut(s)	690
Tru9I	TTAA	1 cut(s)	690
TscAI	CASTG	1 cut(s)	1159
TseFI	GTSAC	2 cut(s)	495, 1060
TseI	GCWGC	6 cut(s)	561, 576, 1034, 1043, 1046, 1055
Tsp45I	GTSAC	2 cut(s)	495, 1060
TspDTI	ATGAA	5 cut(s)	148, 708, 1101, 1280, 1361
TspGWI	ACGGA	1 cut(s)	891
TspRI	CASTG	1 cut(s)	1159
VpaK11BI	GGWCC	3 cut(s)	509, 549, 1109
VspI	ATTAAT	1 cut(s)	690
XagI	CCTNNNNNAGG	1 cut(s)	1073
XapI	RAATTY	3 cut(s)	227, 661, 1198
XceI	RCATGY	1 cut(s)	791
XhoI	CTCGAG	2 cut(s)	395, 1113
XspI	CTAG	5 cut(s)	353, 624, 740, 1161, 1417
ZraI	GACGTC	2 cut(s)	340, 364
ZrmI	AGTACT	1 cut(s)	275
Zsp2I	ATGCAT	1 cut(s)	756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.