Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0007808

Physical Location & Seq

Genomic Coordinates Forward (+)

2672161 .. 2674018

Gene Structure 1858 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G002780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGACTACCAAATCCATCCAAGAGCTTCTCAATCTTCTCAATCCTCCTCCCTCCTCCACATCCTCCTCCGCCGCCGTCAAGCCCGAGATTCCGGCCACGACCGCCCGCCCTCCTCCACCGCCGCCGCCGACCTCCGACGCCGACACCATCTTCATCCCCAGCTACTCCAGCTGGTTCTCCTTCGACCGCATCTACCAAACCGAGCGCCGATCCCTCCCGGAATTCTTCAACTCCCGCTCGCCGGCCAAAAACCCTAACCTCTACAAGTACTACCGCAACCACATCATCAAGCACTACCGCTCCAACCCCGGCCGCCGCCTCACTTTCACCGACGTCCGCAAAACCCTAGTCGGCGACGTCGGCTCGATCCACAGGGTCTTCAATTTCCTCGAGGCTTGGGGTTTGATCAATTACGCTCCCTCGATCAAGTCGCTGAAATGGGAGGAGAAGGACGCGAAATCCGCCGCCGCGCACGGCGGGGCTCAGTCGCCGAAGCCCGGTCCAAAAGACGCTTCTGCCCCTAACAAGGACAAGAAGAGGACCTGCAATGGCTGCAAGTCTCTCTGCAGCATTGCCTGCTTTGTTTCCGAAAAGTATGATATGACTCTATGTGCAAGATGTTATGTTCGTGGGAACTATCAGATTGGTGTGAATTCTTCGGATTTTAGAAGGGTTGAGATTAATGAGGAGACTGGGGATGGTTGGGCAGATAGAGACACATTGCATTTGCTAGAAGCACTCATGCATTATGGCGATGATTGGGGGAAGGTTGCGCAACATGTTGGTAGAAGCGAGAAGGAATGTGTGGCTCACTTCCTCAAGCTTCCTTTTGCTGATAAACCGATAGATGATTTGGATTCCGAGAAGTTGGATGGTAGTGGTGTGAGTCCGTTGAAGGAGGGGAATGGGGATGATGAGGTTGGTTTGGAGAGTAAGAGGATGCGTCTCACGCCTCTTGCGGATGCCAGCAACCCGATCATGGCTCAGACTGCGTTTCTGTCTGCTTTGGCGGGTGTAAAGGCTGCAGAAGCTGCTGCTCGTGCTGCTGTGACAACCCTGTGCGAGGCGGATTATGAAACAAGTAGGATGAGTGTTGGACCTTGGGGGGTGAGCGGGGGTGATGCTGTGTCGAATGGAGACACTGAAGCTAGACTGAATGCAATGGGAGGCGCTTTTGTGGATGCGAATTCGGAGCTGGAGAAGGAAGGGCTGGGTGTGGAGAGAGCAATTTCTGGGATTACAGAGGTGCAAATGAAAGAGATTCAGGATAGGATTGTTCGTTTCGAGGAATTAGATTTGCAGTTGGAGAAAGAAAAGCAACAACTGGAGCAAATGAAATCAATGCTGTTTGTGGATCAGCTTACGCTTTTATCTCATAAAAGATCTGCACCTAAAACCAAAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1

Protein Analysis

468

Amino Acids

51.54

Weight (kDa)

6.36

Isoelectric Point (pI)

43.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	60 - 138	7.9e-24	SWIRM domain
Myb_DNA-binding	PF00249	235 - 275	1.9e-07	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	404 - 464	6.8e-07	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33610
fragaria_vesca	FvH4_3g02280
malus_domestica	MD00G1206800.v1.1 MD05G1344100.v1.1 MD10G1320100.v1.1
prunus_persica	Prupe.4G022300_v2.0.a1 Prupe.5G005400_v2.0.a1
pyrus_communis	pycom05g31350 pycom17g04440
rosa_chinensis	RchiOBHm_Chr5g0003401
rosa_laevigata	RLG00000031136
rosa_multiflora	Rmu_co8020548.1_g000001 Rmu_sc0002963.1_g000013 Rmu_sc0009787.1_g000018 Rmu_sc0023940.1_g000003 Rmu_sc0030755.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072600 Rroxscaffold_1G00072620
rosa_rugosa	Rorug04G0403100
rosa_samantha	Rh5AG029700 Rh5BG029100 Rh5CG031900 Rh5DG029600
rosa_wichuraiana	Rw5G002780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	336, 360
AbsI	CCTCGAGG	1 cut(s)	389
Acc16I	TGCGCA	1 cut(s)	774
Acc36I	ACCTGC	1 cut(s)	551
AccBSI	CCGCTC	3 cut(s)	237, 300, 1113
AccII	CGCG	2 cut(s)	455, 470
AclWI	GGATC	3 cut(s)	204, 361, 1362
AcoI	YGGCCR	3 cut(s)	93, 243, 310
AcsI	RAATTY	3 cut(s)	221, 652, 1186
AcuI	CTGAAG	1 cut(s)	1164
AcyI	GRCGYC	3 cut(s)	138, 333, 357
AfaI	GTAC	1 cut(s)	269
AfiI	CCNNNNNNNGG	5 cut(s)	241, 497, 526, 979, 1063
AflIII	ACRYGT	1 cut(s)	778
AgsI	TTSAA	3 cut(s)	229, 382, 895
AjuI	GAANNNNNNNTTGG	2 cut(s)	496, 528
AluBI	AGCT	8 cut(s)	25, 162, 171, 823, 1031, 1148, 1195, 1360
AluI	AGCT	8 cut(s)	25, 162, 171, 823, 1031, 1148, 1195, 1360
Alw26I	GTCTC	5 cut(s)	564, 683, 708, 950, 1131
AlwI	GGATC	3 cut(s)	204, 361, 1362
AlwNI	CAGNNNCTG	1 cut(s)	1031
Ama87I	CYCGRG	2 cut(s)	83, 389
AoxI	GGCC	3 cut(s)	93, 243, 310
ApeKI	GCWGC	6 cut(s)	552, 567, 1022, 1031, 1034, 1043
ApoI	RAATTY	3 cut(s)	221, 652, 1186
ArsI	GACNNNNNNTTYG	2 cut(s)	333, 365
AseI	ATTAAT	1 cut(s)	681
AspLEI	GCGC	4 cut(s)	207, 472, 775, 1172
AspS9I	GGNCC	3 cut(s)	500, 540, 1097
AsuC2I	CCSGG	3 cut(s)	218, 309, 498
AsuHPI	GGTGA	3 cut(s)	319, 1120, 1130
AvaI	CYCGRG	2 cut(s)	83, 389
AvaII	GGWCC	3 cut(s)	500, 540, 1097
BanII	GRGCYC	1 cut(s)	484
BauI	CACGAG	1 cut(s)	1038
BbsI	GAAGAC	1 cut(s)	370
BbvI	GCAGC	6 cut(s)	539, 579, 1009, 1018, 1021, 1030
BccI	CCATC	4 cut(s)	23, 155, 692, 866
BceAI	ACGGC	2 cut(s)	59, 490
BclI	TGATCA	1 cut(s)	405
BcnI	CCSGG	3 cut(s)	218, 309, 498
BcoDI	GTCTC	5 cut(s)	564, 683, 708, 950, 1131
BfaI	CTAG	4 cut(s)	347, 731, 1149, 1405
BfmI	CTRYAG	2 cut(s)	565, 1023
BfoI	RGCGCY	2 cut(s)	208, 1173
BfuAI	ACCTGC	1 cut(s)	551
BglII	AGATCT	1 cut(s)	1382
BmcAI	AGTACT	1 cut(s)	269
Bme1390I	CCNGG	3 cut(s)	218, 309, 498
Bme18I	GGWCC	3 cut(s)	500, 540, 1097
BmeT110I	CYCGRG	2 cut(s)	83, 389
BmgT120I	GGNCC	3 cut(s)	500, 540, 1097
BmrFI	CCNGG	3 cut(s)	218, 309, 498
BmrI	ACTGGG	1 cut(s)	702
BmsI	GCATC	5 cut(s)	198, 930, 952, 1111, 1171
BmuI	ACTGGG	1 cut(s)	702
BpiI	GAAGAC	1 cut(s)	370
BpmI	CTGGAG	3 cut(s)	151, 1217, 1346
BpuEI	CTTGAG	1 cut(s)	803
BpuMI	CCSGG	3 cut(s)	218, 309, 498
BsaHI	GRCGYC	3 cut(s)	138, 333, 357
BsaJI	CCNNGG	2 cut(s)	307, 1100
BsaXI	ACNNNNNCTCC	2 cut(s)	284, 314
Bsc4I	CCNNNNNNNGG	5 cut(s)	241, 497, 526, 979, 1063
Bse118I	RCCGGY	1 cut(s)	241
Bse1I	ACTGG	2 cut(s)	697, 1329
Bse3DI	GCAATG	4 cut(s)	553, 570, 719, 1167
BseDI	CCNNGG	2 cut(s)	307, 1100
BseLI	CCNNNNNNNGG	5 cut(s)	241, 497, 526, 979, 1063
BseMI	GCAATG	4 cut(s)	553, 570, 719, 1167
BseMII	CTCAG	2 cut(s)	497, 998
BseNI	ACTGG	2 cut(s)	697, 1329
BseRI	GAGGAG	6 cut(s)	36, 43, 55, 102, 458, 701
BseX3I	CGGCCG	1 cut(s)	310
BseXI	GCAGC	6 cut(s)	539, 579, 1009, 1018, 1021, 1030
BseYI	CCCAGC	2 cut(s)	158, 1210
BsgI	GTGCAG	1 cut(s)	1371
Bsh1236I	CGCG	2 cut(s)	455, 470
Bsh1285I	CGRYCG	3 cut(s)	102, 187, 313
BshFI	GGCC	3 cut(s)	95, 245, 312
BsiEI	CGRYCG	3 cut(s)	102, 187, 313
BsiHKCI	CYCGRG	2 cut(s)	83, 389
BsiSI	CCGG	5 cut(s)	92, 218, 242, 309, 498
BslI	CCNNNNNNNGG	5 cut(s)	241, 497, 526, 979, 1063
BsmAI	GTCTC	5 cut(s)	564, 683, 708, 950, 1131
BsmBI	CGTCTC	1 cut(s)	950
BsmI	GAATGC	1 cut(s)	1162
BsnI	GGCC	3 cut(s)	95, 245, 312
BsoBI	CYCGRG	2 cut(s)	83, 389
Bsp1286I	GDGCHC	1 cut(s)	484
Bsp143I	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
BspANI	GGCC	3 cut(s)	95, 245, 312
BspCNI	CTCAG	2 cut(s)	496, 997
BspFNI	CGCG	2 cut(s)	455, 470
BspMAI	CTGCAG	2 cut(s)	569, 1027
BspMI	ACCTGC	1 cut(s)	551
BspPI	GGATC	3 cut(s)	204, 361, 1362
BsrBI	CCGCTC	3 cut(s)	237, 300, 1113
BsrDI	GCAATG	4 cut(s)	553, 570, 719, 1167
BsrFI	RCCGGY	1 cut(s)	241
BsrI	ACTGG	2 cut(s)	697, 1329
BssAI	RCCGGY	1 cut(s)	241
BssECI	CCNNGG	2 cut(s)	307, 1100
BssMI	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
BssNI	GRCGYC	3 cut(s)	138, 333, 357
BssSI	CACGAG	1 cut(s)	1038
BssT1I	CCWWGG	1 cut(s)	1100
Bst2BI	CACGAG	1 cut(s)	1038
Bst6I	CTCTTC	1 cut(s)	530
BstACI	GRCGYC	3 cut(s)	138, 333, 357
BstAPI	GCANNNNNTGC	3 cut(s)	552, 576, 1031
BstC8I	GCNNGC	5 cut(s)	106, 239, 243, 577, 967
BstDEI	CTNAG	2 cut(s)	483, 984
BstENI	CCTNNNNNAGG	1 cut(s)	1061
BstFNI	CGCG	2 cut(s)	455, 470
BstH2I	RGCGCY	2 cut(s)	208, 1173
BstHHI	GCGC	4 cut(s)	207, 472, 775, 1172
BstKTI	GATC	7 cut(s)	212, 369, 408, 426, 978, 1357, 1385
BstMAI	GTCTC	5 cut(s)	564, 683, 708, 950, 1131
BstMBI	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
BstMCI	CGRYCG	3 cut(s)	102, 187, 313
BstNSI	RCATGY	1 cut(s)	782
BstSCI	CCNGG	3 cut(s)	216, 307, 496
BstSFI	CTRYAG	2 cut(s)	565, 1023
BstUI	CGCG	2 cut(s)	455, 470
BstV1I	GCAGC	6 cut(s)	539, 579, 1009, 1018, 1021, 1030
BstV2I	GAAGAC	1 cut(s)	370
BstX2I	RGATCY	1 cut(s)	1382
BstYI	RGATCY	1 cut(s)	1382
BstZI	CGGCCG	1 cut(s)	310
BsuRI	GGCC	3 cut(s)	95, 245, 312
BtgZI	GCGATG	1 cut(s)	768
BtsIMutI	CAGTG	1 cut(s)	1140
BveI	ACCTGC	1 cut(s)	551
Cac8I	GCNNGC	5 cut(s)	106, 239, 243, 577, 967
CaiI	CAGNNNCTG	1 cut(s)	1031
CfoI	GCGC	4 cut(s)	207, 472, 775, 1172
Cfr10I	RCCGGY	1 cut(s)	241
Cfr13I	GGNCC	3 cut(s)	500, 540, 1097
CseI	GACGC	4 cut(s)	146, 461, 518, 932
Csp6I	GTAC	1 cut(s)	268
CviAII	CATG	3 cut(s)	742, 779, 979
CviQI	GTAC	1 cut(s)	268
DdeI	CTNAG	2 cut(s)	483, 984
DpnI	GATC	7 cut(s)	211, 368, 407, 425, 977, 1356, 1384
DpnII	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
EaeI	YGGCCR	3 cut(s)	93, 243, 310
EagI	CGGCCG	1 cut(s)	310
Eam1104I	CTCTTC	1 cut(s)	530
EarI	CTCTTC	1 cut(s)	530
EciI	GGCGGA	3 cut(s)	58, 451, 1082
EclXI	CGGCCG	1 cut(s)	310
Eco130I	CCWWGG	1 cut(s)	1100
Eco24I	GRGCYC	1 cut(s)	484
Eco47I	GGWCC	3 cut(s)	500, 540, 1097
Eco52I	CGGCCG	1 cut(s)	310
Eco57I	CTGAAG	1 cut(s)	1164
Eco88I	CYCGRG	2 cut(s)	83, 389
EcoNI	CCTNNNNNAGG	1 cut(s)	1061
EcoO109I	RGGNCCY	1 cut(s)	540
EcoRI	GAATTC	3 cut(s)	221, 652, 1186
EcoT14I	CCWWGG	1 cut(s)	1100
EcoT22I	ATGCAT	1 cut(s)	747
EcoT38I	GRGCYC	1 cut(s)	484
ErhI	CCWWGG	1 cut(s)	1100
Esp3I	CGTCTC	1 cut(s)	950
FaeI	CATG	3 cut(s)	745, 782, 982
FatI	CATG	3 cut(s)	741, 778, 978
FauI	CCCGC	5 cut(s)	113, 242, 470, 1003, 1106
FbaI	TGATCA	1 cut(s)	405
FriOI	GRGCYC	1 cut(s)	484
FspBI	CTAG	4 cut(s)	347, 731, 1149, 1405
FspI	TGCGCA	1 cut(s)	774
GlaI	GCGC	4 cut(s)	206, 471, 774, 1171
GsaI	CCCAGC	2 cut(s)	162, 1214
GsuI	CTGGAG	3 cut(s)	151, 1217, 1346
HaeII	RGCGCY	2 cut(s)	208, 1173
HaeIII	GGCC	3 cut(s)	95, 245, 312
HapII	CCGG	5 cut(s)	92, 218, 242, 309, 498
HgaI	GACGC	4 cut(s)	146, 461, 518, 932
HhaI	GCGC	4 cut(s)	207, 472, 775, 1172
Hin1I	GRCGYC	3 cut(s)	138, 333, 357
Hin1II	CATG	3 cut(s)	745, 782, 982
Hin6I	GCGC	4 cut(s)	205, 470, 773, 1170
HinP1I	GCGC	4 cut(s)	205, 470, 773, 1170
HindIII	AAGCTT	1 cut(s)	821
HinfI	GANTC	5 cut(s)	88, 604, 857, 886, 1261
HpaII	CCGG	5 cut(s)	92, 218, 242, 309, 498
HphI	GGTGA	3 cut(s)	319, 1120, 1130
Hpy188I	TCNGA	7 cut(s)	136, 589, 642, 661, 862, 987, 1192
Hpy188III	TCNNGA	1 cut(s)	1265
Hpy99I	CGWCG	4 cut(s)	140, 335, 359, 362
HpyAV	CCTTC	8 cut(s)	190, 442, 663, 760, 790, 889, 1195, 1199
HpyCH4IV	ACGT	2 cut(s)	333, 357
HpyF3I	CTNAG	2 cut(s)	483, 984
HpySE526I	ACGT	2 cut(s)	333, 357
Hsp92I	GRCGYC	3 cut(s)	138, 333, 357
Hsp92II	CATG	3 cut(s)	745, 782, 982
HspAI	GCGC	4 cut(s)	205, 470, 773, 1170
KroI	GCCGGC	1 cut(s)	241
KroNI	GCCGGC	1 cut(s)	243
Ksp22I	TGATCA	1 cut(s)	405
Kzo9I	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
LmnI	GCTCC	4 cut(s)	305, 421, 1192, 1327
Lsp1109I	GCAGC	6 cut(s)	539, 579, 1009, 1018, 1021, 1030
LweI	GCATC	5 cut(s)	198, 930, 952, 1111, 1171
MaeI	CTAG	4 cut(s)	347, 731, 1149, 1405
MaeII	ACGT	2 cut(s)	333, 357
MaeIII	GTNAC	1 cut(s)	1048
MalI	GATC	7 cut(s)	211, 368, 407, 425, 977, 1356, 1384
MbiI	CCGCTC	3 cut(s)	237, 300, 1113
MboI	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
MboII	GAAGA	6 cut(s)	26, 142, 217, 370, 547, 648
MflI	RGATCY	1 cut(s)	1382
MhlI	GDGCHC	1 cut(s)	484
MluCI	AATT	7 cut(s)	221, 382, 409, 652, 1186, 1227, 1289
MlyI	GAGTC	2 cut(s)	598, 895
MmeI	TCCRAC	5 cut(s)	159, 327, 849, 1075, 1284
Mph1103I	ATGCAT	1 cut(s)	747
MroNI	GCCGGC	1 cut(s)	241
MseI	TTAA	1 cut(s)	681
MspA1I	CMGCKG	1 cut(s)	171
MspI	CCGG	5 cut(s)	92, 218, 242, 309, 498
MspR9I	CCNGG	3 cut(s)	218, 309, 498
Mva1269I	GAATGC	1 cut(s)	1162
MvnI	CGCG	2 cut(s)	455, 470
NaeI	GCCGGC	1 cut(s)	243
NciI	CCSGG	3 cut(s)	218, 309, 498
NdeII	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
NgoMIV	GCCGGC	1 cut(s)	241
NlaIII	CATG	3 cut(s)	745, 782, 982
NmuCI	GTSAC	1 cut(s)	1048
NsbI	TGCGCA	1 cut(s)	774
NsiI	ATGCAT	1 cut(s)	747
NspI	RCATGY	1 cut(s)	782
PaeR7I	CTCGAG	1 cut(s)	389
PciI	ACATGT	1 cut(s)	778
PctI	GAATGC	1 cut(s)	1162
PdiI	GCCGGC	1 cut(s)	243
PfeI	GAWTC	3 cut(s)	88, 857, 1261
PfoI	TCCNGGA	1 cut(s)	216
PleI	GAGTC	2 cut(s)	598, 894
PpsI	GAGTC	2 cut(s)	598, 894
PpuMI	RGGWCCY	1 cut(s)	540
PscI	ACATGT	1 cut(s)	778
PshBI	ATTAAT	1 cut(s)	681
Psp5II	RGGWCCY	1 cut(s)	540
PspFI	CCCAGC	2 cut(s)	158, 1210
PspPI	GGNCC	3 cut(s)	500, 540, 1097
PspPPI	RGGWCCY	1 cut(s)	540
PspXI	VCTCGAGB	1 cut(s)	389
PstI	CTGCAG	2 cut(s)	569, 1027
PstNI	CAGNNNCTG	1 cut(s)	1031
PsuI	RGATCY	1 cut(s)	1382
PvuII	CAGCTG	1 cut(s)	171
RsaI	GTAC	1 cut(s)	269
RsaNI	GTAC	1 cut(s)	268
SaqAI	TTAA	1 cut(s)	681
Sau3AI	GATC	7 cut(s)	209, 366, 405, 423, 975, 1354, 1382
Sau96I	GGNCC	3 cut(s)	500, 540, 1097
ScaI	AGTACT	1 cut(s)	269
SchI	GAGTC	2 cut(s)	598, 895
ScrFI	CCNGG	3 cut(s)	218, 309, 498
SduI	GDGCHC	1 cut(s)	484
SfaNI	GCATC	5 cut(s)	198, 930, 952, 1111, 1171
SfcI	CTRYAG	2 cut(s)	565, 1023
Sfr274I	CTCGAG	1 cut(s)	389
SinI	GGWCC	3 cut(s)	500, 540, 1097
SlaI	CTCGAG	1 cut(s)	389
SmlI	CTYRAG	2 cut(s)	389, 818
SmoI	CTYRAG	2 cut(s)	389, 818
Sse9I	AATT	7 cut(s)	221, 382, 409, 652, 1186, 1227, 1289
SspMI	CTAG	4 cut(s)	347, 731, 1149, 1405
StyD4I	CCNGG	3 cut(s)	216, 307, 496
StyI	CCWWGG	1 cut(s)	1100
TaiI	ACGT	2 cut(s)	336, 360
TaqI	TCGA	6 cut(s)	183, 365, 390, 422, 1130, 1284
TasI	AATT	7 cut(s)	221, 382, 409, 652, 1186, 1227, 1289
TatI	WGTACW	1 cut(s)	267
TauI	GCSGC	7 cut(s)	74, 124, 127, 315, 318, 467, 470
TfiI	GAWTC	3 cut(s)	88, 857, 1261
Tru1I	TTAA	1 cut(s)	681
Tru9I	TTAA	1 cut(s)	681
TscAI	CASTG	1 cut(s)	1147
TseFI	GTSAC	1 cut(s)	1048
TseI	GCWGC	6 cut(s)	552, 567, 1022, 1031, 1034, 1043
Tsp45I	GTSAC	1 cut(s)	1048
TspDTI	ATGAA	4 cut(s)	142, 1089, 1268, 1349
TspGWI	ACGGA	1 cut(s)	879
TspRI	CASTG	1 cut(s)	1147
VpaK11BI	GGWCC	3 cut(s)	500, 540, 1097
VspI	ATTAAT	1 cut(s)	681
XagI	CCTNNNNNAGG	1 cut(s)	1061
XapI	RAATTY	3 cut(s)	221, 652, 1186
XceI	RCATGY	1 cut(s)	782
XhoI	CTCGAG	1 cut(s)	389
XspI	CTAG	4 cut(s)	347, 731, 1149, 1405
ZraI	GACGTC	2 cut(s)	334, 358
ZrmI	AGTACT	1 cut(s)	269
Zsp2I	ATGCAT	1 cut(s)	747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.