Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0007808

Physical Location & Seq

Genomic Coordinates Reverse (-)

40189290 .. 40193258

Gene Structure 3969 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1320100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCTACCAAATCAGCGGCCGTCGACCTCTCCTCCTCCGACACCCCATCCAAACCCCCACCCACTCCACTTCCGATCCCCGTCAATCCGGAGACTCCGACCACCGCCACCCCACGCCAAACTGAACCGCGTCCCACCTCTGACGCCTACGTCATCCACGTCCCCAGCTATTCCAGCTGGTTCTCGCCGGACCACATCCACCACTGCGAGGTCCGATTCCTCCCCGAGTTCTTCGACTCTCGATCCCCTTCCAAAAGCCCTAGCCTCTACAAGTACTATCGCAACACCATCGTCAGCCAATCCAGGGCCGTCAACCCTTCTCGGAAGCTCACCTTCACGGAGGCCCGCAAGGCTCTCGTCGGCGACGTCGGCTCCGTTAGGAGGGTTTTTGATTTCCTGGAGGCGTGGGGTTTGATCAATTACACTCCTTCCGCACCCAACAAGCCCCTCAGGTGGGAGGACAAGGACAGCAGCAAGGCCGCCGCTGCGTCCTCTAATGGCGGCGCTGAATCCCCCGCTGGCGGTCCCCAAGGACGGGTCTTCCGGGACCAACAAGGAGAGCCCAAAGAAGAGGACCTGCAATGGCTGCAAAATGACATGACCCTATGTGCAAGGTGCTATGTTCGCAGCAACTATCAGATCGGCATAAGTTCTTCCGATTTCAGGCGGGTTGAAATCAATGAAGAGATGGGGAGTGGCTGGGCTGATAAAGATACTCTGCATCTTCTAGAAGCCCTTATGCATTATGGCGACGATTGGAGGAAGGTTGCGCAGCATGTCGGGAGAAGTGAGAAGGAATGTGTTGCTCATTTTCTCATGATTCCTTTTGGCGAGGAGTTTACTGGGGATCTGGATTACAAGCAGACTAGTGGAATGAAGGAAGATGCAGCTGATGCTGAATCTGGATTGGAGGGTGATGGTGATGGTGACGGTACAACACCGTCCTTAAGTAAAAGAATGCGTCTCACGCCTCTTGCGGATGCAAGCAACCCAATTATGGCTCAGGCCGCCTTTCTGTCAGCACTGGCGGGCGTACAGGTTGCAGAGGCTGCTGCTTCTGCTGCCGTAACAACCCTGTGTGCGGCGGATTATGAAACAAGTAAAATGAGTGTTCCATCTCTGGCTTCGAGCGCAAGACAGCATGAAGCCGATGCTGAATTAAATGGAGACAATAAAACTGACCTGGATGCACTGGGGGCAGCTTTTGTAGATTCAAATTCACAGCTTGAGAAGGAATGGCTGGATGTGGGAAGATCAATATCAGGGATTACAGAAGTACAGCTGAGAGAGATCCAGAAGAAGATTATTCGCTTCGAGGCGTTGGATTTGCAGATGGAGAAAGAATGGGAACAACTGGAGCAAATGAGAAGCATGCTGGAACAACTGGAGCAAATGAGAAGCATGCTCTTCGTCGATCAGATGACGCTTTTGTTCAACAAAAGTTCTGCTCCAAAAACTACAGAAGGGGCGGAGGAGAAGAATGTAAAAGCGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1

Protein Analysis

499

Amino Acids

54.93

Weight (kDa)

4.98

Isoelectric Point (pI)

52.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	62 - 141	6.3e-22	SWIRM domain
Myb_DNA-binding	PF00249	234 - 273	6.4e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33610
fragaria_vesca	FvH4_3g02280
malus_domestica	MD00G1206800.v1.1 MD05G1344100.v1.1 MD10G1320100.v1.1
prunus_persica	Prupe.4G022300_v2.0.a1 Prupe.5G005400_v2.0.a1
pyrus_communis	pycom05g31350 pycom17g04440
rosa_chinensis	RchiOBHm_Chr5g0003401
rosa_laevigata	RLG00000031136
rosa_multiflora	Rmu_co8020548.1_g000001 Rmu_sc0002963.1_g000013 Rmu_sc0009787.1_g000018 Rmu_sc0023940.1_g000003 Rmu_sc0030755.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072600 Rroxscaffold_1G00072620
rosa_rugosa	Rorug04G0403100
rosa_samantha	Rh5AG029700 Rh5BG029100 Rh5CG031900 Rh5DG029600
rosa_wichuraiana	Rw5G002780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	149
AatII	GACGTC	1 cut(s)	369
Acc16I	TGCGCA	1 cut(s)	771
Acc36I	ACCTGC	1 cut(s)	585
AccI	GTMKAC	1 cut(s)	24
AccII	CGCG	1 cut(s)	130
AccIII	TCCGGA	1 cut(s)	88
AclWI	GGATC	4 cut(s)	70, 237, 855, 1285
AcoI	YGGCCR	1 cut(s)	18
AcsI	RAATTY	1 cut(s)	1216
AcyI	GRCGYC	2 cut(s)	144, 366
AfaI	GTAC	4 cut(s)	275, 934, 1035, 1278
AflII	CTTAAG	1 cut(s)	946
AgsI	TTSAA	3 cut(s)	674, 1215, 1435
AhlI	ACTAGT	1 cut(s)	866
AjiI	CACGTC	1 cut(s)	160
AjnI	CCWGG	3 cut(s)	302, 396, 1182
AluBI	AGCT	7 cut(s)	168, 177, 328, 890, 1202, 1225, 1282
AluI	AGCT	7 cut(s)	168, 177, 328, 890, 1202, 1225, 1282
Alw26I	GTCTC	3 cut(s)	86, 968, 1161
AlwI	GGATC	4 cut(s)	70, 237, 855, 1285
AlwNI	CAGNNNCTG	1 cut(s)	1049
Ama87I	CYCGRG	1 cut(s)	224
Aor13HI	TCCGGA	1 cut(s)	88
AoxI	GGCC	5 cut(s)	18, 306, 342, 477, 1005
ApoI	RAATTY	1 cut(s)	1216
AspLEI	GCGC	3 cut(s)	506, 772, 1133
AspS9I	GGNCC	7 cut(s)	190, 211, 306, 343, 524, 547, 574
AsuC2I	CCSGG	1 cut(s)	545
AsuHPI	GGTGA	4 cut(s)	322, 926, 932, 938
AvaI	CYCGRG	1 cut(s)	224
AvaII	GGWCC	5 cut(s)	190, 211, 524, 547, 574
AxyI	CCTNAGG	1 cut(s)	449
BanII	GRGCYC	1 cut(s)	564
BbsI	GAAGAC	1 cut(s)	532
BccI	CCATC	7 cut(s)	55, 296, 682, 911, 917, 1123, 1327
BceAI	ACGGC	3 cut(s)	5, 293, 1049
BcgI	CGANNNNNNTGC	6 cut(s)	271, 305, 337, 371, 1390, 1424
BciT130I	CCWGG	3 cut(s)	304, 398, 1184
BclI	TGATCA	1 cut(s)	414
BcnI	CCSGG	1 cut(s)	545
BcoDI	GTCTC	3 cut(s)	86, 968, 1161
BcuI	ACTAGT	1 cut(s)	866
BfaI	CTAG	3 cut(s)	261, 728, 867
BfmI	CTRYAG	1 cut(s)	1458
BfoI	RGCGCY	1 cut(s)	507
BfrI	CTTAAG	1 cut(s)	946
BfuAI	ACCTGC	1 cut(s)	585
BglI	GCCNNNNNGGC	1 cut(s)	350
BmcAI	AGTACT	1 cut(s)	275
Bme1390I	CCNGG	4 cut(s)	304, 398, 545, 1184
Bme18I	GGWCC	5 cut(s)	190, 211, 524, 547, 574
BmeT110I	CYCGRG	1 cut(s)	224
BmgBI	CACGTC	1 cut(s)	160
BmgT120I	GGNCC	7 cut(s)	190, 211, 306, 343, 524, 547, 574
BmiI	GGNNCC	3 cut(s)	373, 526, 548
BmrFI	CCNGG	4 cut(s)	304, 398, 545, 1184
BmrI	ACTGGG	2 cut(s)	852, 1202
BmsI	GCATC	6 cut(s)	730, 874, 883, 970, 1141, 1177
BmuI	ACTGGG	2 cut(s)	852, 1202
BpiI	GAAGAC	1 cut(s)	532
BpmI	CTGGAG	3 cut(s)	419, 1376, 1406
Bpu10I	CCTNAGC	1 cut(s)	1002
BpuEI	CTTGAG	1 cut(s)	1247
BpuMI	CCSGG	1 cut(s)	545
BsaBI	GATNNNNATC	1 cut(s)	1258
BsaHI	GRCGYC	2 cut(s)	144, 366
BsaJI	CCNNGG	2 cut(s)	303, 529
BsaWI	WCCGGW	1 cut(s)	88
BsaXI	ACNNNNNCTCC	4 cut(s)	17, 47, 356, 386
Bse1I	ACTGG	5 cut(s)	847, 1029, 1197, 1359, 1389
Bse21I	CCTNAGG	1 cut(s)	449
Bse3DI	GCAATG	1 cut(s)	587
Bse8I	GATNNNNATC	1 cut(s)	1258
BseAI	TCCGGA	1 cut(s)	88
BseBI	CCWGG	3 cut(s)	304, 398, 1184
BseDI	CCNNGG	2 cut(s)	303, 529
BseGI	GGATG	6 cut(s)	47, 153, 195, 985, 1192, 1249
BseJI	GATNNNNATC	1 cut(s)	1258
BseMI	GCAATG	1 cut(s)	587
BseMII	CTCAG	3 cut(s)	463, 1016, 1274
BseNI	ACTGG	5 cut(s)	847, 1029, 1197, 1359, 1389
BseRI	GAGGAG	4 cut(s)	22, 25, 848, 1487
BseX3I	CGGCCG	1 cut(s)	18
BseYI	CCCAGC	2 cut(s)	164, 699
Bsh1236I	CGCG	1 cut(s)	130
Bsh1285I	CGRYCG	1 cut(s)	21
BshFI	GGCC	5 cut(s)	20, 308, 344, 479, 1007
BsiEI	CGRYCG	1 cut(s)	21
BsiHKCI	CYCGRG	1 cut(s)	224
BsiSI	CCGG	3 cut(s)	89, 188, 544
BslFI	GGGAC	4 cut(s)	117, 146, 510, 560
BsmAI	GTCTC	3 cut(s)	86, 968, 1161
BsmBI	CGTCTC	1 cut(s)	968
BsmFI	GGGAC	4 cut(s)	117, 146, 510, 560
BsmI	GAATGC	1 cut(s)	963
BsnI	GGCC	5 cut(s)	20, 308, 344, 479, 1007
BsoBI	CYCGRG	1 cut(s)	224
Bsp1286I	GDGCHC	1 cut(s)	564
Bsp13I	TCCGGA	1 cut(s)	88
Bsp143I	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
BspANI	GGCC	5 cut(s)	20, 308, 344, 479, 1007
BspCNI	CTCAG	3 cut(s)	462, 1015, 1275
BspEI	TCCGGA	1 cut(s)	88
BspFNI	CGCG	1 cut(s)	130
BspHI	TCATGA	1 cut(s)	816
BspLI	GGNNCC	3 cut(s)	373, 526, 548
BspMI	ACCTGC	1 cut(s)	585
BspPI	GGATC	4 cut(s)	70, 237, 855, 1285
BspQI	GCTCTTC	1 cut(s)	1412
BspTI	CTTAAG	1 cut(s)	946
BsrDI	GCAATG	1 cut(s)	587
BsrI	ACTGG	5 cut(s)	847, 1029, 1197, 1359, 1389
BssECI	CCNNGG	2 cut(s)	303, 529
BssMI	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
BssNI	GRCGYC	2 cut(s)	144, 366
BssT1I	CCWWGG	1 cut(s)	529
Bst2UI	CCWGG	3 cut(s)	304, 398, 1184
Bst4CI	ACNGT	2 cut(s)	932, 942
Bst6I	CTCTTC	3 cut(s)	564, 678, 1412
BstACI	GRCGYC	2 cut(s)	144, 366
BstAFI	CTTAAG	1 cut(s)	946
BstAPI	GCANNNNNTGC	3 cut(s)	586, 893, 1049
BstC8I	GCNNGC	6 cut(s)	346, 520, 985, 1030, 1373, 1403
BstDEI	CTNAG	3 cut(s)	449, 1002, 1283
BstF5I	GGATG	6 cut(s)	47, 153, 195, 985, 1192, 1249
BstFNI	CGCG	1 cut(s)	130
BstH2I	RGCGCY	1 cut(s)	507
BstHHI	GCGC	3 cut(s)	506, 772, 1133
BstKTI	GATC	8 cut(s)	78, 245, 417, 642, 850, 1256, 1293, 1417
BstMAI	GTCTC	3 cut(s)	86, 968, 1161
BstMBI	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
BstMCI	CGRYCG	1 cut(s)	21
BstNI	CCWGG	3 cut(s)	304, 398, 1184
BstNSI	RCATGY	3 cut(s)	779, 1375, 1405
BstSCI	CCNGG	4 cut(s)	302, 396, 543, 1182
BstSFI	CTRYAG	1 cut(s)	1458
BstUI	CGCG	1 cut(s)	130
BstV2I	GAAGAC	1 cut(s)	532
BstX2I	RGATCY	2 cut(s)	847, 1290
BstYI	RGATCY	2 cut(s)	847, 1290
BstZI	CGGCCG	1 cut(s)	18
Bsu36I	CCTNAGG	1 cut(s)	449
BsuRI	GGCC	5 cut(s)	20, 308, 344, 479, 1007
BtrI	CACGTC	1 cut(s)	160
BtsCI	GGATG	6 cut(s)	47, 153, 195, 985, 1192, 1249
BtsI	GCAGTG	1 cut(s)	202
BtsIMutI	CAGTG	3 cut(s)	202, 1022, 1190
BveI	ACCTGC	1 cut(s)	585
Cac8I	GCNNGC	6 cut(s)	346, 520, 985, 1030, 1373, 1403
CaiI	CAGNNNCTG	1 cut(s)	1049
CciI	TCATGA	1 cut(s)	816
CfoI	GCGC	3 cut(s)	506, 772, 1133
Cfr13I	GGNCC	7 cut(s)	190, 211, 306, 343, 524, 547, 574
CseI	GACGC	5 cut(s)	119, 152, 477, 950, 1432
Csp6I	GTAC	4 cut(s)	274, 933, 1034, 1277
CviAII	CATG	6 cut(s)	598, 776, 817, 1142, 1372, 1402
CviQI	GTAC	4 cut(s)	274, 933, 1034, 1277
DdeI	CTNAG	3 cut(s)	449, 1002, 1283
DpnI	GATC	8 cut(s)	77, 244, 416, 641, 849, 1255, 1292, 1416
DpnII	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
EaeI	YGGCCR	1 cut(s)	18
EagI	CGGCCG	1 cut(s)	18
Eam1104I	CTCTTC	3 cut(s)	564, 678, 1412
EarI	CTCTTC	3 cut(s)	564, 678, 1412
EciI	GGCGGA	2 cut(s)	1100, 1484
EclXI	CGGCCG	1 cut(s)	18
Eco130I	CCWWGG	1 cut(s)	529
Eco24I	GRGCYC	1 cut(s)	564
Eco47I	GGWCC	5 cut(s)	190, 211, 524, 547, 574
Eco52I	CGGCCG	1 cut(s)	18
Eco81I	CCTNAGG	1 cut(s)	449
Eco88I	CYCGRG	1 cut(s)	224
EcoO109I	RGGNCCY	1 cut(s)	574
EcoRII	CCWGG	3 cut(s)	302, 396, 1182
EcoT14I	CCWWGG	1 cut(s)	529
EcoT22I	ATGCAT	1 cut(s)	744
EcoT38I	GRGCYC	1 cut(s)	564
ErhI	CCWWGG	1 cut(s)	529
Esp3I	CGTCTC	1 cut(s)	968
FaeI	CATG	6 cut(s)	601, 779, 820, 1145, 1375, 1405
FalI	AAGNNNNNCTT	2 cut(s)	317, 349
FaqI	GGGAC	4 cut(s)	117, 146, 510, 560
FatI	CATG	6 cut(s)	597, 775, 816, 1141, 1371, 1401
FauI	CCCGC	4 cut(s)	353, 523, 660, 1021
FbaI	TGATCA	1 cut(s)	414
FblI	GTMKAC	1 cut(s)	24
FokI	GGATG	6 cut(s)	34, 140, 182, 992, 1199, 1256
FriOI	GRGCYC	1 cut(s)	564
FspBI	CTAG	3 cut(s)	261, 728, 867
FspI	TGCGCA	1 cut(s)	771
GlaI	GCGC	3 cut(s)	505, 771, 1132
GsaI	CCCAGC	2 cut(s)	168, 703
GsuI	CTGGAG	3 cut(s)	419, 1376, 1406
HaeII	RGCGCY	1 cut(s)	507
HaeIII	GGCC	5 cut(s)	20, 308, 344, 479, 1007
HapII	CCGG	3 cut(s)	89, 188, 544
HgaI	GACGC	5 cut(s)	119, 152, 477, 950, 1432
HhaI	GCGC	3 cut(s)	506, 772, 1133
Hin1I	GRCGYC	2 cut(s)	144, 366
Hin1II	CATG	6 cut(s)	601, 779, 820, 1145, 1375, 1405
Hin6I	GCGC	3 cut(s)	504, 770, 1131
HinP1I	GCGC	3 cut(s)	504, 770, 1131
HincII	GTYRAC	2 cut(s)	25, 313
HindII	GTYRAC	2 cut(s)	25, 313
HinfI	GANTC	7 cut(s)	94, 216, 236, 509, 820, 899, 1211
HpaII	CCGG	3 cut(s)	89, 188, 544
HphI	GGTGA	4 cut(s)	322, 926, 932, 938
Hpy166II	GTNNAC	3 cut(s)	25, 313, 840
Hpy188I	TCNGA	9 cut(s)	40, 75, 99, 142, 215, 324, 639, 658, 1419
Hpy188III	TCNNGA	8 cut(s)	89, 240, 728, 781, 817, 851, 903, 1294
Hpy8I	GTNNAC	3 cut(s)	25, 313, 840
Hpy99I	CGWCG	6 cut(s)	26, 362, 368, 371, 755, 1415
HpyAV	CCTTC	9 cut(s)	258, 327, 343, 438, 757, 787, 871, 1225, 1457
HpyCH4III	ACNGT	2 cut(s)	932, 942
HpyCH4IV	ACGT	3 cut(s)	150, 159, 366
HpyF3I	CTNAG	3 cut(s)	449, 1002, 1283
HpySE526I	ACGT	3 cut(s)	150, 159, 366
Hsp92I	GRCGYC	2 cut(s)	144, 366
Hsp92II	CATG	6 cut(s)	601, 779, 820, 1145, 1375, 1405
HspAI	GCGC	3 cut(s)	504, 770, 1131
Kpn2I	TCCGGA	1 cut(s)	88
Ksp22I	TGATCA	1 cut(s)	414
Kzo9I	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
LguI	GCTCTTC	1 cut(s)	1412
LmnI	GCTCC	4 cut(s)	377, 1357, 1387, 1453
LweI	GCATC	6 cut(s)	730, 874, 883, 970, 1141, 1177
MaeI	CTAG	3 cut(s)	261, 728, 867
MaeII	ACGT	3 cut(s)	150, 159, 366
MaeIII	GTNAC	2 cut(s)	926, 1066
MalI	GATC	8 cut(s)	77, 244, 416, 641, 849, 1255, 1292, 1416
MboI	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
MflI	RGATCY	2 cut(s)	847, 1290
MhlI	GDGCHC	1 cut(s)	564
MluCI	AATT	5 cut(s)	418, 993, 1157, 1216, 1492
MlyI	GAGTC	2 cut(s)	88, 230
MmeI	TCCRAC	3 cut(s)	63, 122, 1302
Mph1103I	ATGCAT	1 cut(s)	744
MroI	TCCGGA	1 cut(s)	88
MseI	TTAA	2 cut(s)	947, 1160
MspA1I	CMGCKG	6 cut(s)	17, 177, 485, 518, 890, 1282
MspCI	CTTAAG	1 cut(s)	946
MspI	CCGG	3 cut(s)	89, 188, 544
MspR9I	CCNGG	4 cut(s)	304, 398, 545, 1184
Mva1269I	GAATGC	1 cut(s)	963
MvaI	CCWGG	3 cut(s)	304, 398, 1184
MvnI	CGCG	1 cut(s)	130
NciI	CCSGG	1 cut(s)	545
NdeII	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
NlaIII	CATG	6 cut(s)	601, 779, 820, 1145, 1375, 1405
NlaIV	GGNNCC	3 cut(s)	373, 526, 548
NmuCI	GTSAC	1 cut(s)	926
NsbI	TGCGCA	1 cut(s)	771
NsiI	ATGCAT	1 cut(s)	744
NspI	RCATGY	3 cut(s)	779, 1375, 1405
PaeI	GCATGC	2 cut(s)	1375, 1405
PagI	TCATGA	1 cut(s)	816
PciSI	GCTCTTC	1 cut(s)	1412
PcsI	WCGNNNNNNNCGW	3 cut(s)	156, 363, 372
PctI	GAATGC	1 cut(s)	963
PfeI	GAWTC	5 cut(s)	216, 509, 820, 899, 1211
PfoI	TCCNGGA	2 cut(s)	396, 543
PleI	GAGTC	2 cut(s)	88, 230
PpsI	GAGTC	2 cut(s)	88, 230
PpuMI	RGGWCCY	1 cut(s)	574
Psp5II	RGGWCCY	1 cut(s)	574
Psp6I	CCWGG	3 cut(s)	302, 396, 1182
PspFI	CCCAGC	2 cut(s)	164, 699
PspGI	CCWGG	3 cut(s)	302, 396, 1182
PspN4I	GGNNCC	3 cut(s)	373, 526, 548
PspPI	GGNCC	7 cut(s)	190, 211, 306, 343, 524, 547, 574
PspPPI	RGGWCCY	1 cut(s)	574
PstNI	CAGNNNCTG	1 cut(s)	1049
PsuI	RGATCY	2 cut(s)	847, 1290
PvuII	CAGCTG	3 cut(s)	177, 890, 1282
RsaI	GTAC	4 cut(s)	275, 934, 1035, 1278
RsaNI	GTAC	4 cut(s)	274, 933, 1034, 1277
SalI	GTCGAC	1 cut(s)	23
SapI	GCTCTTC	1 cut(s)	1412
SaqAI	TTAA	2 cut(s)	947, 1160
Sau3AI	GATC	8 cut(s)	75, 242, 414, 639, 847, 1253, 1290, 1414
Sau96I	GGNCC	7 cut(s)	190, 211, 306, 343, 524, 547, 574
ScaI	AGTACT	1 cut(s)	275
SchI	GAGTC	2 cut(s)	88, 230
ScrFI	CCNGG	4 cut(s)	304, 398, 545, 1184
SduI	GDGCHC	1 cut(s)	564
SfaNI	GCATC	6 cut(s)	730, 874, 883, 970, 1141, 1177
SfcI	CTRYAG	1 cut(s)	1458
SinI	GGWCC	5 cut(s)	190, 211, 524, 547, 574
SmlI	CTYRAG	2 cut(s)	946, 1226
SmoI	CTYRAG	2 cut(s)	946, 1226
SpeI	ACTAGT	1 cut(s)	866
SphI	GCATGC	2 cut(s)	1375, 1405
Sse9I	AATT	5 cut(s)	418, 993, 1157, 1216, 1492
SspMI	CTAG	3 cut(s)	261, 728, 867
StyD4I	CCNGG	4 cut(s)	302, 396, 543, 1182
StyI	CCWWGG	1 cut(s)	529
TaaI	ACNGT	2 cut(s)	932, 942
TaiI	ACGT	3 cut(s)	153, 162, 369
TaqI	TCGA	6 cut(s)	24, 234, 241, 1127, 1314, 1413
TasI	AATT	5 cut(s)	418, 993, 1157, 1216, 1492
TatI	WGTACW	2 cut(s)	273, 1276
TauI	GCSGC	6 cut(s)	20, 482, 485, 504, 1010, 1085
TfiI	GAWTC	5 cut(s)	216, 509, 820, 899, 1211
Tru1I	TTAA	2 cut(s)	947, 1160
Tru9I	TTAA	2 cut(s)	947, 1160
TscAI	CASTG	3 cut(s)	209, 1029, 1197
TseFI	GTSAC	1 cut(s)	926
Tsp45I	GTSAC	1 cut(s)	926
TspDTI	ATGAA	4 cut(s)	696, 890, 1107, 1158
TspGWI	ACGGA	2 cut(s)	353, 364
TspRI	CASTG	3 cut(s)	209, 1029, 1197
Vha464I	CTTAAG	1 cut(s)	946
VpaK11BI	GGWCC	5 cut(s)	190, 211, 524, 547, 574
XapI	RAATTY	1 cut(s)	1216
XbaI	TCTAGA	1 cut(s)	727
XceI	RCATGY	3 cut(s)	779, 1375, 1405
XmiI	GTMKAC	1 cut(s)	24
XspI	CTAG	3 cut(s)	261, 728, 867
ZraI	GACGTC	1 cut(s)	367
ZrmI	AGTACT	1 cut(s)	275
Zsp2I	ATGCAT	1 cut(s)	744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.