Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0007808

Physical Location & Seq

Genomic Coordinates Forward (+)

2141878 .. 2144145

Gene Structure 2268 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG029600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGACTACCAAATCCATCCAAGAGCTTCTCAATCTTCTCAATCCTCCTCCCTCCTCCTCCGCCGTCAAGCCCGATATTCCGGCCACTCCGGCCACGACCGCCCGCCCTCCTCCACCGCCGCCGACGACCTCCGACGCCGACACCATCTTCATCCCCAGCTACTCCAGCTGGTTCTCCTTCGACCGCGTCTACCAAACCGAGCGCCGATCCCTCCCGGAATTCTTCAACTCCCGCTCGCCGGCCAAAAACCCTAACCTCTACAAGTACTACCGCAACCACATCATCAAGCACTACCGCTCCAACCCCGGCCGCCGCCTCACTTTCACCGACGTCCGCAAAACCCTAGTCGGCGACGTCGGCTCCATTCACAGGGTCTTCAATTTCCTCGAGGCTTGGGGTTTGATCAATTACGCTCCCTCGATCAAGTCGCTGAAATGGGAGGAGAAGGACGCGAAGTCCGCCGCCGCGCACGGCGGCGGCGGCGCTCAGTCACCGAAGCCCGGTCCGAAAGACGCTTCTGCCCCTAACAAGGACAAGAAGAGGACCTGCAATGGCTGCAAGTCTCTCTGCAGCATTGCCTGCTTTGTTTCCGAAAAGTATGATATGACTCTATGTGCAAGATGTTATGTTCGTGGGAACTATCAGATTGGTGTGAATTCTTCGGATTTTAGAAGGGTTGAGATTAATGAGGAGACTGGGGATGGTTGGGCAGATAGAGACACATTGCATTTGCTAGAAGCACTTATGCATTATGGTGATGATTGGGGGAAGGTCGCGCAACATGTTGGTAGAAGCGAGAAGGAATGTGTGGCTCACTTCTTGAAGCTTCCTTTTGCTGATAAGCCGATAGATGATTTGGATTCCGAGAAGTTGGGTAGTGGTGGTGTGAGTCTGTTGAAGGAGGGGAATGGGGATGATGAGGTTGGTTTGGAGAGTAAGAGGATGCGCCTCACGCCTCTTGCAGATGCCAGCAACCCGATTATGGCTCAGACAGCGTTTCTGTCTGCTTTGGCGGGTGTAAAGGCTGCAGAAGCTGCTGCTCGTGCTGCTGTGACAACCCTGTGTGAGGCGGATTATGAAACGAGTAGGATGAGTGTTGGACCTCGTGGGGTGAGTGGGGGTGATGCTGTGTCGAATGGAGACACTGAAGCTAGATTGAATGCAATGGGAGGCGCTTTTGTGGATGCGAATTCGGAGCTGGAGAAGGAAGGGCTGGGTGTGGAGAGAGCAATTTCTGGGATTACAGAGGTGCAGATGAAAGAAATTCAAGACAGGATTGTTCGTTTCGAGGAATTAGATTTGCAGTTGGAGAAAGAAAAGCAACAACTGGAGCAAATGAAATCAATGCTGTTTGTGGATCAGCTTACGCTTTTGTCTCATAAGAGATCTGCACCTAAAACCAAAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1

Protein Analysis

469

Amino Acids

51.51

Weight (kDa)

6.78

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	59 - 137	1.5e-23	SWIRM domain
Myb_DNA-binding	PF00249	236 - 276	1.9e-07	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	405 - 466	5.2e-07	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33610
fragaria_vesca	FvH4_3g02280
malus_domestica	MD00G1206800.v1.1 MD05G1344100.v1.1 MD10G1320100.v1.1
prunus_persica	Prupe.4G022300_v2.0.a1 Prupe.5G005400_v2.0.a1
pyrus_communis	pycom05g31350 pycom17g04440
rosa_chinensis	RchiOBHm_Chr5g0003401
rosa_laevigata	RLG00000031136
rosa_multiflora	Rmu_co8020548.1_g000001 Rmu_sc0002963.1_g000013 Rmu_sc0009787.1_g000018 Rmu_sc0023940.1_g000003 Rmu_sc0030755.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072600 Rroxscaffold_1G00072620
rosa_rugosa	Rorug04G0403100
rosa_samantha	Rh5AG029700 Rh5BG029100 Rh5CG031900 Rh5DG029600
rosa_wichuraiana	Rw5G002780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	333, 357
AbsI	CCTCGAGG	1 cut(s)	386
Acc36I	ACCTGC	1 cut(s)	554
AccBSI	CCGCTC	2 cut(s)	234, 297
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	4 cut(s)	186, 452, 467, 776
AclWI	GGATC	2 cut(s)	201, 1365
AcoI	YGGCCR	4 cut(s)	81, 90, 240, 307
AcsI	RAATTY	4 cut(s)	218, 655, 1189, 1263
AcuI	CTGAAG	1 cut(s)	1167
AcyI	GRCGYC	3 cut(s)	135, 330, 354
AfaI	GTAC	1 cut(s)	266
AfiI	CCNNNNNNNGG	6 cut(s)	238, 369, 500, 529, 982, 1066
AflIII	ACRYGT	1 cut(s)	781
AgsI	TTSAA	6 cut(s)	226, 379, 823, 898, 1159, 1268
AhdI	GACNNNNNGTC	1 cut(s)	454
AluBI	AGCT	9 cut(s)	25, 159, 168, 826, 1034, 1151, 1198, 1363, 1407
AluI	AGCT	9 cut(s)	25, 159, 168, 826, 1034, 1151, 1198, 1363, 1407
Alw26I	GTCTC	5 cut(s)	567, 686, 711, 1134, 1380
AlwI	GGATC	2 cut(s)	201, 1365
AlwNI	CAGNNNCTG	1 cut(s)	1034
Ama87I	CYCGRG	1 cut(s)	386
AoxI	GGCC	4 cut(s)	81, 90, 240, 307
ApeKI	GCWGC	6 cut(s)	555, 570, 1025, 1034, 1037, 1046
ApoI	RAATTY	4 cut(s)	218, 655, 1189, 1263
ArsI	GACNNNNNNTTYG	2 cut(s)	330, 362
AseI	ATTAAT	1 cut(s)	684
AspLEI	GCGC	6 cut(s)	204, 469, 485, 778, 948, 1175
AspS9I	GGNCC	3 cut(s)	503, 543, 1100
AsuC2I	CCSGG	3 cut(s)	215, 306, 501
AsuHPI	GGTGA	5 cut(s)	316, 483, 767, 1123, 1133
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	3 cut(s)	503, 543, 1100
BauI	CACGAG	2 cut(s)	1041, 1104
BbsI	GAAGAC	1 cut(s)	367
BbvI	GCAGC	6 cut(s)	542, 582, 1012, 1021, 1024, 1033
BccI	CCATC	3 cut(s)	23, 152, 695
BceAI	ACGGC	2 cut(s)	47, 487
BclI	TGATCA	1 cut(s)	402
BcnI	CCSGG	3 cut(s)	215, 306, 501
BcoDI	GTCTC	5 cut(s)	567, 686, 711, 1134, 1380
BfaI	CTAG	4 cut(s)	344, 734, 1152, 1408
BfmI	CTRYAG	2 cut(s)	568, 1026
BfoI	RGCGCY	3 cut(s)	205, 486, 1176
BfuAI	ACCTGC	1 cut(s)	554
BglI	GCCNNNNNGGC	1 cut(s)	89
BglII	AGATCT	1 cut(s)	1385
BmcAI	AGTACT	1 cut(s)	266
Bme1390I	CCNGG	3 cut(s)	215, 306, 501
Bme18I	GGWCC	3 cut(s)	503, 543, 1100
BmeRI	GACNNNNNGTC	1 cut(s)	454
BmeT110I	CYCGRG	1 cut(s)	386
BmgT120I	GGNCC	3 cut(s)	503, 543, 1100
BmiI	GGNNCC	1 cut(s)	361
BmrFI	CCNGG	3 cut(s)	215, 306, 501
BmrI	ACTGGG	1 cut(s)	705
BmsI	GCATC	4 cut(s)	933, 955, 1114, 1174
BmuI	ACTGGG	1 cut(s)	705
BpiI	GAAGAC	1 cut(s)	367
BpmI	CTGGAG	3 cut(s)	148, 1220, 1349
BpuMI	CCSGG	3 cut(s)	215, 306, 501
BsaHI	GRCGYC	3 cut(s)	135, 330, 354
BsaJI	CCNNGG	1 cut(s)	304
BsaXI	ACNNNNNCTCC	4 cut(s)	281, 311, 344, 374
Bsc4I	CCNNNNNNNGG	6 cut(s)	238, 369, 500, 529, 982, 1066
Bse118I	RCCGGY	1 cut(s)	238
Bse1I	ACTGG	2 cut(s)	700, 1332
Bse3DI	GCAATG	4 cut(s)	556, 573, 722, 1170
BseDI	CCNNGG	1 cut(s)	304
BseGI	GGATG	7 cut(s)	15, 150, 706, 919, 948, 1095, 1189
BseLI	CCNNNNNNNGG	6 cut(s)	238, 369, 500, 529, 982, 1066
BseMI	GCAATG	4 cut(s)	556, 573, 722, 1170
BseMII	CTCAG	2 cut(s)	500, 1001
BseNI	ACTGG	2 cut(s)	700, 1332
BseRI	GAGGAG	6 cut(s)	36, 43, 46, 99, 455, 704
BseX3I	CGGCCG	1 cut(s)	307
BseXI	GCAGC	6 cut(s)	542, 582, 1012, 1021, 1024, 1033
BseYI	CCCAGC	2 cut(s)	155, 1213
BsgI	GTGCAG	2 cut(s)	1271, 1374
Bsh1236I	CGCG	4 cut(s)	186, 452, 467, 776
Bsh1285I	CGRYCG	3 cut(s)	99, 184, 310
BshFI	GGCC	4 cut(s)	83, 92, 242, 309
BsiEI	CGRYCG	3 cut(s)	99, 184, 310
BsiHKCI	CYCGRG	1 cut(s)	386
BsiSI	CCGG	6 cut(s)	80, 89, 215, 239, 306, 501
BslI	CCNNNNNNNGG	6 cut(s)	238, 369, 500, 529, 982, 1066
BsmAI	GTCTC	5 cut(s)	567, 686, 711, 1134, 1380
BsmI	GAATGC	1 cut(s)	1165
BsnI	GGCC	4 cut(s)	83, 92, 242, 309
BsoBI	CYCGRG	1 cut(s)	386
Bsp143I	GATC	5 cut(s)	206, 402, 420, 1357, 1385
BspANI	GGCC	4 cut(s)	83, 92, 242, 309
BspCNI	CTCAG	2 cut(s)	499, 1000
BspFNI	CGCG	4 cut(s)	186, 452, 467, 776
BspLI	GGNNCC	1 cut(s)	361
BspMAI	CTGCAG	2 cut(s)	572, 1030
BspMI	ACCTGC	1 cut(s)	554
BspPI	GGATC	2 cut(s)	201, 1365
BsrBI	CCGCTC	2 cut(s)	234, 297
BsrDI	GCAATG	4 cut(s)	556, 573, 722, 1170
BsrFI	RCCGGY	1 cut(s)	238
BsrI	ACTGG	2 cut(s)	700, 1332
BssAI	RCCGGY	1 cut(s)	238
BssECI	CCNNGG	1 cut(s)	304
BssMI	GATC	5 cut(s)	206, 402, 420, 1357, 1385
BssNI	GRCGYC	3 cut(s)	135, 330, 354
BssSI	CACGAG	2 cut(s)	1041, 1104
Bst2BI	CACGAG	2 cut(s)	1041, 1104
Bst6I	CTCTTC	1 cut(s)	533
BstACI	GRCGYC	3 cut(s)	135, 330, 354
BstAPI	GCANNNNNTGC	3 cut(s)	555, 579, 1034
BstC8I	GCNNGC	5 cut(s)	103, 236, 240, 580, 970
BstDEI	CTNAG	2 cut(s)	486, 987
BstENI	CCTNNNNNAGG	1 cut(s)	1064
BstF5I	GGATG	7 cut(s)	15, 150, 706, 919, 948, 1095, 1189
BstFNI	CGCG	4 cut(s)	186, 452, 467, 776
BstH2I	RGCGCY	3 cut(s)	205, 486, 1176
BstHHI	GCGC	6 cut(s)	204, 469, 485, 778, 948, 1175
BstKTI	GATC	5 cut(s)	209, 405, 423, 1360, 1388
BstMAI	GTCTC	5 cut(s)	567, 686, 711, 1134, 1380
BstMBI	GATC	5 cut(s)	206, 402, 420, 1357, 1385
BstMCI	CGRYCG	3 cut(s)	99, 184, 310
BstNSI	RCATGY	1 cut(s)	785
BstSCI	CCNGG	3 cut(s)	213, 304, 499
BstSFI	CTRYAG	2 cut(s)	568, 1026
BstUI	CGCG	4 cut(s)	186, 452, 467, 776
BstV1I	GCAGC	6 cut(s)	542, 582, 1012, 1021, 1024, 1033
BstV2I	GAAGAC	1 cut(s)	367
BstX2I	RGATCY	1 cut(s)	1385
BstYI	RGATCY	1 cut(s)	1385
BstZI	CGGCCG	1 cut(s)	307
BsuRI	GGCC	4 cut(s)	83, 92, 242, 309
BtsCI	GGATG	7 cut(s)	15, 150, 706, 919, 948, 1095, 1189
BtsIMutI	CAGTG	1 cut(s)	1143
BveI	ACCTGC	1 cut(s)	554
Cac8I	GCNNGC	5 cut(s)	103, 236, 240, 580, 970
CaiI	CAGNNNCTG	1 cut(s)	1034
CfoI	GCGC	6 cut(s)	204, 469, 485, 778, 948, 1175
Cfr10I	RCCGGY	1 cut(s)	238
Cfr13I	GGNCC	3 cut(s)	503, 543, 1100
CpoI	CGGWCCG	1 cut(s)	503
CseI	GACGC	4 cut(s)	143, 175, 458, 521
Csp6I	GTAC	1 cut(s)	265
CspI	CGGWCCG	1 cut(s)	503
CviAII	CATG	1 cut(s)	782
CviQI	GTAC	1 cut(s)	265
DdeI	CTNAG	2 cut(s)	486, 987
DpnI	GATC	5 cut(s)	208, 404, 422, 1359, 1387
DpnII	GATC	5 cut(s)	206, 402, 420, 1357, 1385
DriI	GACNNNNNGTC	1 cut(s)	454
EaeI	YGGCCR	4 cut(s)	81, 90, 240, 307
EagI	CGGCCG	1 cut(s)	307
Eam1104I	CTCTTC	1 cut(s)	533
Eam1105I	GACNNNNNGTC	1 cut(s)	454
EarI	CTCTTC	1 cut(s)	533
EciI	GGCGGA	3 cut(s)	49, 448, 1085
EclXI	CGGCCG	1 cut(s)	307
Eco47I	GGWCC	3 cut(s)	503, 543, 1100
Eco52I	CGGCCG	1 cut(s)	307
Eco57I	CTGAAG	1 cut(s)	1167
Eco88I	CYCGRG	1 cut(s)	386
EcoNI	CCTNNNNNAGG	1 cut(s)	1064
EcoO109I	RGGNCCY	1 cut(s)	543
EcoRI	GAATTC	3 cut(s)	218, 655, 1189
EcoT22I	ATGCAT	1 cut(s)	750
FaeI	CATG	1 cut(s)	785
FatI	CATG	1 cut(s)	781
FauI	CCCGC	3 cut(s)	110, 239, 1006
FbaI	TGATCA	1 cut(s)	402
FblI	GTMKAC	1 cut(s)	189
FokI	GGATG	7 cut(s)	2, 137, 713, 926, 955, 1102, 1196
FspBI	CTAG	4 cut(s)	344, 734, 1152, 1408
GlaI	GCGC	6 cut(s)	203, 468, 484, 777, 947, 1174
GsaI	CCCAGC	2 cut(s)	159, 1217
GsuI	CTGGAG	3 cut(s)	148, 1220, 1349
HaeII	RGCGCY	3 cut(s)	205, 486, 1176
HaeIII	GGCC	4 cut(s)	83, 92, 242, 309
HapII	CCGG	6 cut(s)	80, 89, 215, 239, 306, 501
HgaI	GACGC	4 cut(s)	143, 175, 458, 521
HhaI	GCGC	6 cut(s)	204, 469, 485, 778, 948, 1175
Hin1I	GRCGYC	3 cut(s)	135, 330, 354
Hin1II	CATG	1 cut(s)	785
Hin6I	GCGC	6 cut(s)	202, 467, 483, 776, 946, 1173
HinP1I	GCGC	6 cut(s)	202, 467, 483, 776, 946, 1173
HindIII	AAGCTT	1 cut(s)	824
HinfI	GANTC	3 cut(s)	607, 860, 889
HpaII	CCGG	6 cut(s)	80, 89, 215, 239, 306, 501
HphI	GGTGA	5 cut(s)	316, 483, 767, 1123, 1133
Hpy166II	GTNNAC	1 cut(s)	190
Hpy188I	TCNGA	8 cut(s)	133, 507, 592, 645, 664, 865, 990, 1195
Hpy188III	TCNNGA	2 cut(s)	820, 1268
Hpy8I	GTNNAC	1 cut(s)	190
Hpy99I	CGWCG	5 cut(s)	127, 137, 332, 356, 359
HpyAV	CCTTC	8 cut(s)	187, 439, 666, 763, 793, 892, 1198, 1202
HpyCH4IV	ACGT	2 cut(s)	330, 354
HpyF3I	CTNAG	2 cut(s)	486, 987
HpySE526I	ACGT	2 cut(s)	330, 354
Hsp92I	GRCGYC	3 cut(s)	135, 330, 354
Hsp92II	CATG	1 cut(s)	785
HspAI	GCGC	6 cut(s)	202, 467, 483, 776, 946, 1173
KroI	GCCGGC	1 cut(s)	238
KroNI	GCCGGC	1 cut(s)	240
Ksp22I	TGATCA	1 cut(s)	402
Kzo9I	GATC	5 cut(s)	206, 402, 420, 1357, 1385
LmnI	GCTCC	5 cut(s)	302, 365, 418, 1195, 1330
Lsp1109I	GCAGC	6 cut(s)	542, 582, 1012, 1021, 1024, 1033
LweI	GCATC	4 cut(s)	933, 955, 1114, 1174
MaeI	CTAG	4 cut(s)	344, 734, 1152, 1408
MaeII	ACGT	2 cut(s)	330, 354
MaeIII	GTNAC	2 cut(s)	489, 1051
MalI	GATC	5 cut(s)	208, 404, 422, 1359, 1387
MbiI	CCGCTC	2 cut(s)	234, 297
MboI	GATC	5 cut(s)	206, 402, 420, 1357, 1385
MboII	GAAGA	6 cut(s)	26, 139, 214, 367, 550, 651
MflI	RGATCY	1 cut(s)	1385
MluCI	AATT	8 cut(s)	218, 379, 406, 655, 1189, 1230, 1263, 1292
MlyI	GAGTC	2 cut(s)	601, 898
MmeI	TCCRAC	4 cut(s)	156, 324, 1078, 1287
Mph1103I	ATGCAT	1 cut(s)	750
MroNI	GCCGGC	1 cut(s)	238
MseI	TTAA	1 cut(s)	684
MslI	CAYNNNNRTG	1 cut(s)	753
MspA1I	CMGCKG	1 cut(s)	168
MspI	CCGG	6 cut(s)	80, 89, 215, 239, 306, 501
MspR9I	CCNGG	3 cut(s)	215, 306, 501
Mva1269I	GAATGC	1 cut(s)	1165
MvnI	CGCG	4 cut(s)	186, 452, 467, 776
NaeI	GCCGGC	1 cut(s)	240
NciI	CCSGG	3 cut(s)	215, 306, 501
NdeII	GATC	5 cut(s)	206, 402, 420, 1357, 1385
NgoMIV	GCCGGC	1 cut(s)	238
NlaIII	CATG	1 cut(s)	785
NlaIV	GGNNCC	1 cut(s)	361
NmuCI	GTSAC	2 cut(s)	489, 1051
NsiI	ATGCAT	1 cut(s)	750
NspI	RCATGY	1 cut(s)	785
PaeR7I	CTCGAG	1 cut(s)	386
PciI	ACATGT	1 cut(s)	781
PctI	GAATGC	1 cut(s)	1165
PdiI	GCCGGC	1 cut(s)	240
PfeI	GAWTC	1 cut(s)	860
PflFI	GACNNNGTC	1 cut(s)	185
PfoI	TCCNGGA	1 cut(s)	213
PleI	GAGTC	2 cut(s)	601, 897
PpsI	GAGTC	2 cut(s)	601, 897
PpuMI	RGGWCCY	1 cut(s)	543
PscI	ACATGT	1 cut(s)	781
PshBI	ATTAAT	1 cut(s)	684
Psp5II	RGGWCCY	1 cut(s)	543
PspFI	CCCAGC	2 cut(s)	155, 1213
PspN4I	GGNNCC	1 cut(s)	361
PspPI	GGNCC	3 cut(s)	503, 543, 1100
PspPPI	RGGWCCY	1 cut(s)	543
PspXI	VCTCGAGB	1 cut(s)	386
PstI	CTGCAG	2 cut(s)	572, 1030
PstNI	CAGNNNCTG	1 cut(s)	1034
PsuI	RGATCY	1 cut(s)	1385
PsyI	GACNNNGTC	1 cut(s)	185
PvuII	CAGCTG	1 cut(s)	168
RsaI	GTAC	1 cut(s)	266
RsaNI	GTAC	1 cut(s)	265
RseI	CAYNNNNRTG	1 cut(s)	753
Rsr2I	CGGWCCG	1 cut(s)	503
RsrII	CGGWCCG	1 cut(s)	503
SaqAI	TTAA	1 cut(s)	684
Sau3AI	GATC	5 cut(s)	206, 402, 420, 1357, 1385
Sau96I	GGNCC	3 cut(s)	503, 543, 1100
ScaI	AGTACT	1 cut(s)	266
SchI	GAGTC	2 cut(s)	601, 898
ScrFI	CCNGG	3 cut(s)	215, 306, 501
SfaNI	GCATC	4 cut(s)	933, 955, 1114, 1174
SfcI	CTRYAG	2 cut(s)	568, 1026
SfiI	GGCCNNNNNGGCC	1 cut(s)	89
Sfr274I	CTCGAG	1 cut(s)	386
SinI	GGWCC	3 cut(s)	503, 543, 1100
SlaI	CTCGAG	1 cut(s)	386
SmiMI	CAYNNNNRTG	1 cut(s)	753
SmlI	CTYRAG	1 cut(s)	386
SmoI	CTYRAG	1 cut(s)	386
Sse9I	AATT	8 cut(s)	218, 379, 406, 655, 1189, 1230, 1263, 1292
SspMI	CTAG	4 cut(s)	344, 734, 1152, 1408
StyD4I	CCNGG	3 cut(s)	213, 304, 499
TaiI	ACGT	2 cut(s)	333, 357
TaqI	TCGA	5 cut(s)	180, 387, 419, 1133, 1287
TasI	AATT	8 cut(s)	218, 379, 406, 655, 1189, 1230, 1263, 1292
TatI	WGTACW	1 cut(s)	264
TauI	GCSGC	8 cut(s)	121, 312, 315, 464, 467, 477, 480, 483
TfiI	GAWTC	1 cut(s)	860
Tru1I	TTAA	1 cut(s)	684
Tru9I	TTAA	1 cut(s)	684
TscAI	CASTG	1 cut(s)	1150
TseFI	GTSAC	2 cut(s)	489, 1051
TseI	GCWGC	6 cut(s)	555, 570, 1025, 1034, 1037, 1046
Tsp45I	GTSAC	2 cut(s)	489, 1051
TspDTI	ATGAA	4 cut(s)	139, 1092, 1271, 1352
TspRI	CASTG	1 cut(s)	1150
Tth111I	GACNNNGTC	1 cut(s)	185
VpaK11BI	GGWCC	3 cut(s)	503, 543, 1100
VspI	ATTAAT	1 cut(s)	684
XagI	CCTNNNNNAGG	1 cut(s)	1064
XapI	RAATTY	4 cut(s)	218, 655, 1189, 1263
XceI	RCATGY	1 cut(s)	785
XhoI	CTCGAG	1 cut(s)	386
XmiI	GTMKAC	1 cut(s)	189
XspI	CTAG	4 cut(s)	344, 734, 1152, 1408
ZraI	GACGTC	2 cut(s)	331, 355
ZrmI	AGTACT	1 cut(s)	266
Zsp2I	ATGCAT	1 cut(s)	750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.