Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0005754

Physical Location & Seq

Genomic Coordinates Reverse (-)

1170406 .. 1174932

Gene Structure 4527 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1010000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGACGACGATGGATAATCCACCAACCAAAAAGAAGAAAGGTCGTCCTTCTCTCTTGGATCTCCAGAAACGCGCCCTCCTCCAACAACAGCAGCACGACCAATCCCCAAACCCTCGCCGTCCATCCACTCGCCGGAACCCTACTCCTCTCGGTTCATCCCCGCCGTCCAATTCCCTCTCCGATGCCGACGCCGACGATGAGCGGGCAAAGAAGAAGCATAAGCCCCTCCTCGCTTTTAATCCCAATTCGGCTCCGACATTGTCGCCCTTTAATTCGGGCCCCTTCGGCTGCGATTCGAACGCGGGTGGTGAGGATCCGGGGGCCGCTCTCAAGATCAGCACCATCCATCACGGATCTAATCATATGAGCCAAGAAGAGATTTTGAAAGCGACAGACAGTAGTAGTATATTACATGGGTCGCAGGTTGAGTCCGGTCCCACGACACCTTTGCCAGACAAAAAGTTGTTGGTGTTCATCCTTGATAGGCTTCAAAAAAAGGACACTCGCGGGGTGTTCTCCGAGCCTGTTGATCCAGAGGAGCTTCCTGATTATCACGAAATCATTCAAAACCCAATGGATTTTGGAACTGTGCGGACAAAACTAGATCAGGGAGCTTACTCCAGTTTGGAACAGTTTGAGAAAGATGTGTTCTTGATATGTTCAAATGCAATGGAGTATAATGCACCAGACACTATTTACTTTCGACAGGCACGATCTATACAAGAGCTCGCAAAAAAGGACTTCGAAAATTTGAGGCAAGTGAACGAAGATGGTGATCCGAAACCAAAAATTGCAAGGAGAGGCAGGCCACCTGGCAAGAGCATGAAAAAGTCAATTGAAGGATCTCCTGTTGATCGTGTAGGTCCTCAAATTGTATCTGAAACTACTCTTGCTTCTGGAGGAGAAAATTCTAACTTATCCGGCACATATAATCTAAGACGGCCTGCTCCCCATAAGTTCAGGTCTTCTGATGCCTTAAATATGGCCCCCCATGGGTATCTTAGTGGTGAAACTGGTGCTAGTTGGTTGCCTGGTTGGGAGAATGAGTTTCCAGCTTCGGTATTGAGGAGTGATCTGAAGTATGGAAAGAAACATTTTACTGTAGATGAGAATAGACGTGACACTTATACACAAGCTCTGGCTTCGGGTGATGAACCATCTATCTTTTCTGGTTGTGAAGGAGAATGGAAGCAACTAGTGGCGGTAGGTCTTCAATTTGAGCATGGATATGCAAGGAGTCTAGCTCGATTTGCTGCAAATCTTGGACCCATTGCTTGGAAGGTTGCTTCAAAGAAAATTGGAAGTGCTTTGCCTAGTGGAATCAAGTTTGGTCCGGGATGGATTGGAGAAAATGAGACATCAAGGTTGCCACAGTTTTCAATCTGTGAGAGGGAACAGAGGGTTCAAAGCAATCCTGCATCTGATGACCATTCAGACAGACTTCTACCTCAAAGTACATTATGCTCAAACTCTGTTGTTCCAAATAGATTTTCGCTACAAAGTGGTGTTAACGTAGAAAGTAGGAGACAATTGAGTTCCCACAATGAAGCGGCGTCAGTTGACAACGGTGCGTGTGGGATAAGAGCTGTGCCTCCTTTCCCAGTTCAGCAGAATTTCACAAATCACTCTGGGATGTCATCTTCAACTGACAAATCAGTGCCTTCTCAAATACTCAGCATGGCCTCCGAGAGCAACGCCATCATCCATCAAATGCCTATCAAGCATATTGCTTCAGAGGAAGCCAAATTGCCAGAAATTTCAAGTGGATCGAGATCTAGCCATCTGCTTGGTGGGGAAGCATCCTGGCACGGTTCATCCTTACGCAATAAACAGGTTTCTTATTCATTCCCCTCTGACTTGAACGTCAAACTGGGTGCACCCGGCTCACCTCAAATCGGTCTGCAACAGCAGCCGGATTTAGCTTTGCAGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

645

Amino Acids

70.25

Weight (kDa)

7.7

Isoelectric Point (pI)

58.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	159 - 238	7.4e-24	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20670 AT1G76380 AT1G76380 AT1G76380
fragaria_vesca	FvH4_5g24560 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400
malus_domestica	MD06G1010000.v1.1 MD16G1284400.v1.1
prunus_persica	Prupe.5G010200_v2.0.a1
pyrus_communis	pycom06g00820 pycom16g25950
rosa_chinensis	RchiOBHm_Chr7g0215631
rosa_laevigata	RLG00000002637
rosa_multiflora	Rmu_sc0000898.1_g000040 Rmu_sc0007602.1_g000008
rosa_roxburghii	Rroxscaffold_3G00243980
rosa_rugosa	Rorug07G0155700 Rorug07G0155700
rosa_samantha	Rh7AG292100 Rh7BG284700 Rh7CG312100 Rh7DG295500
rosa_wichuraiana	Rw7G024880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1862
Acc36I	ACCTGC	1 cut(s)	412
AccB7I	CCANNNNNTGG	1 cut(s)	1275
AccBSI	CCGCTC	2 cut(s)	202, 326
AccII	CGCG	3 cut(s)	72, 302, 507
AciI	CCGC	8 cut(s)	161, 202, 302, 324, 507, 592, 1202, 1550
AclWI	GGATC	8 cut(s)	66, 308, 321, 361, 524, 770, 850, 1774
AcsI	RAATTY	4 cut(s)	748, 907, 1612, 1755
AcuI	CTGAAG	2 cut(s)	1097, 1716
AcyI	GRCGYC	2 cut(s)	189, 1553
AfaI	GTAC	1 cut(s)	1456
AfiI	CCNNNNNNNGG	4 cut(s)	132, 993, 1275, 1895
AhlI	ACTAGT	1 cut(s)	1195
AjiI	CACGTC	1 cut(s)	1118
AjnI	CCWGG	3 cut(s)	811, 1030, 1802
AjuI	GAANNNNNNNTTGG	2 cut(s)	1474, 1506
AluBI	AGCT	9 cut(s)	541, 614, 727, 1055, 1136, 1244, 1586, 1922, 1930
AluI	AGCT	9 cut(s)	541, 614, 727, 1055, 1136, 1244, 1586, 1922, 1930
Alw21I	GWGCWC	2 cut(s)	729, 1879
Alw26I	GTCTC	2 cut(s)	1349, 1519
Alw44I	GTGCAC	1 cut(s)	1875
AlwI	GGATC	8 cut(s)	66, 308, 321, 361, 524, 770, 850, 1774
AoxI	GGCC	6 cut(s)	277, 321, 806, 941, 984, 1680
ApaI	GGGCCC	1 cut(s)	281
ApaLI	GTGCAC	1 cut(s)	1875
ApeKI	GCWGC	5 cut(s)	91, 288, 1253, 1909, 1927
ApoI	RAATTY	4 cut(s)	748, 907, 1612, 1755
Asp700I	GAANNNNTTC	1 cut(s)	561
AspLEI	GCGC	1 cut(s)	74
AspS9I	GGNCC	8 cut(s)	277, 278, 321, 434, 863, 985, 1265, 1331
AsuC2I	CCSGG	3 cut(s)	318, 1335, 1881
AsuHPI	GGTGA	5 cut(s)	320, 785, 1019, 1160, 1878
AsuII	TTCGAA	2 cut(s)	296, 744
AvaII	GGWCC	4 cut(s)	434, 863, 1265, 1331
BaeGI	GKGCMC	2 cut(s)	281, 1879
BamHI	GGATCC	1 cut(s)	313
BanII	GRGCYC	2 cut(s)	281, 729
BbsI	GAAGAC	2 cut(s)	957, 1202
Bbv12I	GWGCWC	2 cut(s)	729, 1879
BbvI	GCAGC	4 cut(s)	103, 275, 1240, 1921
BceAI	ACGGC	3 cut(s)	102, 148, 956
BcgI	CGANNNNNNTGC	2 cut(s)	430, 464
BciT130I	CCWGG	3 cut(s)	813, 1032, 1804
BcnI	CCSGG	3 cut(s)	318, 1335, 1881
BcoDI	GTCTC	2 cut(s)	1349, 1519
BcuI	ACTAGT	1 cut(s)	1195
BfaI	CTAG	6 cut(s)	602, 1020, 1196, 1241, 1314, 1776
BfmI	CTRYAG	1 cut(s)	1101
BfuAI	ACCTGC	1 cut(s)	412
BglI	GCCNNNNNGGC	1 cut(s)	285
BglII	AGATCT	1 cut(s)	1772
BisI	GCNGC	7 cut(s)	92, 289, 324, 1254, 1551, 1910, 1928
BlsI	GCNGC	7 cut(s)	93, 290, 325, 1255, 1552, 1911, 1929
Bme1390I	CCNGG	6 cut(s)	318, 813, 1032, 1335, 1804, 1881
Bme18I	GGWCC	4 cut(s)	434, 863, 1265, 1331
BmgBI	CACGTC	1 cut(s)	1118
BmgT120I	GGNCC	8 cut(s)	277, 278, 321, 434, 863, 985, 1265, 1331
BmiI	GGNNCC	9 cut(s)	137, 252, 279, 280, 315, 322, 436, 987, 1267
BmrFI	CCNGG	6 cut(s)	318, 813, 1032, 1335, 1804, 1881
BmrI	ACTGGG	2 cut(s)	1595, 1880
BmsI	GCATC	4 cut(s)	172, 961, 1427, 1808
BmuI	ACTGGG	2 cut(s)	1595, 1880
BpiI	GAAGAC	2 cut(s)	957, 1202
BplI	GAGNNNNNCTC	2 cut(s)	1228, 1260
BpmI	CTGGAG	3 cut(s)	47, 604, 918
Bpu14I	TTCGAA	2 cut(s)	296, 744
BpuEI	CTTGAG	1 cut(s)	314
BpuMI	CCSGG	3 cut(s)	318, 1335, 1881
BsaBI	GATNNNNATC	2 cut(s)	774, 1771
BsaHI	GRCGYC	2 cut(s)	189, 1553
BsaJI	CCNNGG	2 cut(s)	317, 991
BsaWI	WCCGGW	1 cut(s)	431
BsaXI	ACNNNNNCTCC	4 cut(s)	60, 90, 1031, 1061
Bsc4I	CCNNNNNNNGG	4 cut(s)	132, 993, 1275, 1895
Bse1I	ACTGG	4 cut(s)	621, 1018, 1601, 1875
Bse3DI	GCAATG	2 cut(s)	675, 1269
Bse8I	GATNNNNATC	2 cut(s)	774, 1771
BseBI	CCWGG	3 cut(s)	813, 1032, 1804
BseDI	CCNNGG	2 cut(s)	317, 991
BseGI	GGATG	9 cut(s)	122, 155, 342, 474, 1343, 1638, 1701, 1799, 1814
BseJI	GATNNNNATC	2 cut(s)	774, 1771
BseLI	CCNNNNNNNGG	4 cut(s)	132, 993, 1275, 1895
BseMI	GCAATG	2 cut(s)	675, 1269
BseMII	CTCAG	1 cut(s)	1687
BseNI	ACTGG	4 cut(s)	621, 1018, 1601, 1875
BseRI	GAGGAG	6 cut(s)	68, 135, 218, 551, 915, 1081
BseSI	GKGCMC	2 cut(s)	281, 1879
BseXI	GCAGC	4 cut(s)	103, 275, 1240, 1921
Bsh1236I	CGCG	3 cut(s)	72, 302, 507
BshFI	GGCC	6 cut(s)	279, 323, 808, 943, 986, 1682
BsiHKAI	GWGCWC	2 cut(s)	729, 1879
BsiSI	CCGG	7 cut(s)	133, 317, 432, 921, 1334, 1881, 1913
BslFI	GGGAC	1 cut(s)	420
BslI	CCNNNNNNNGG	4 cut(s)	132, 993, 1275, 1895
BsmAI	GTCTC	2 cut(s)	1349, 1519
BsmFI	GGGAC	1 cut(s)	420
BsnI	GGCC	6 cut(s)	279, 323, 808, 943, 986, 1682
Bsp119I	TTCGAA	2 cut(s)	296, 744
Bsp120I	GGGCCC	1 cut(s)	277
Bsp1286I	GDGCHC	3 cut(s)	281, 729, 1879
Bsp19I	CCATGG	1 cut(s)	991
BspACI	CCGC	8 cut(s)	161, 202, 302, 324, 507, 592, 1202, 1550
BspANI	GGCC	6 cut(s)	279, 323, 808, 943, 986, 1682
BspCNI	CTCAG	1 cut(s)	1686
BspFNI	CGCG	3 cut(s)	72, 302, 507
BspLI	GGNNCC	9 cut(s)	137, 252, 279, 280, 315, 322, 436, 987, 1267
BspMI	ACCTGC	1 cut(s)	412
BspPI	GGATC	8 cut(s)	66, 308, 321, 361, 524, 770, 850, 1774
BspT104I	TTCGAA	2 cut(s)	296, 744
BsrBI	CCGCTC	2 cut(s)	202, 326
BsrDI	GCAATG	2 cut(s)	675, 1269
BsrI	ACTGG	4 cut(s)	621, 1018, 1601, 1875
BssECI	CCNNGG	2 cut(s)	317, 991
BssNI	GRCGYC	2 cut(s)	189, 1553
BssT1I	CCWWGG	1 cut(s)	991
Bst2UI	CCWGG	3 cut(s)	813, 1032, 1804
Bst4CI	ACNGT	7 cut(s)	398, 589, 633, 1102, 1374, 1568, 1811
Bst6I	CTCTTC	1 cut(s)	369
BstACI	GRCGYC	2 cut(s)	189, 1553
BstBI	TTCGAA	2 cut(s)	296, 744
BstC8I	GCNNGC	4 cut(s)	204, 729, 806, 945
BstDEI	CTNAG	3 cut(s)	935, 1001, 1673
BstDSI	CCRYGG	1 cut(s)	991
BstF5I	GGATG	9 cut(s)	122, 155, 342, 474, 1343, 1638, 1701, 1799, 1814
BstFNI	CGCG	3 cut(s)	72, 302, 507
BstHHI	GCGC	1 cut(s)	74
BstMAI	GTCTC	2 cut(s)	1349, 1519
BstMWI	GCNNNNNNNGC	4 cut(s)	285, 1250, 1720, 1909
BstNI	CCWGG	3 cut(s)	813, 1032, 1804
BstSCI	CCNGG	6 cut(s)	316, 811, 1030, 1333, 1802, 1879
BstSFI	CTRYAG	1 cut(s)	1101
BstSLI	GKGCMC	2 cut(s)	281, 1879
BstUI	CGCG	3 cut(s)	72, 302, 507
BstV1I	GCAGC	4 cut(s)	103, 275, 1240, 1921
BstV2I	GAAGAC	2 cut(s)	957, 1202
BstX2I	RGATCY	5 cut(s)	58, 313, 353, 842, 1772
BstXI	CCANNNNNNTGG	1 cut(s)	1787
BstYI	RGATCY	5 cut(s)	58, 313, 353, 842, 1772
BsuRI	GGCC	6 cut(s)	279, 323, 808, 943, 986, 1682
BtgI	CCRYGG	1 cut(s)	991
BtrI	CACGTC	1 cut(s)	1118
BtsCI	GGATG	9 cut(s)	122, 155, 342, 474, 1343, 1638, 1701, 1799, 1814
BtsIMutI	CAGTG	1 cut(s)	1662
BveI	ACCTGC	1 cut(s)	412
Cac8I	GCNNGC	4 cut(s)	204, 729, 806, 945
CfoI	GCGC	1 cut(s)	74
Cfr13I	GGNCC	8 cut(s)	277, 278, 321, 434, 863, 985, 1265, 1331
CseI	GACGC	2 cut(s)	197, 1542
Csp6I	GTAC	1 cut(s)	1455
CviAII	CATG	5 cut(s)	413, 823, 992, 1223, 1678
CviQI	GTAC	1 cut(s)	1455
DdeI	CTNAG	3 cut(s)	935, 1001, 1673
DrdI	GACNNNNNNGTC	1 cut(s)	1862
DseDI	GACNNNNNNGTC	1 cut(s)	1862
Eam1104I	CTCTTC	1 cut(s)	369
EarI	CTCTTC	1 cut(s)	369
Ecl136II	GAGCTC	1 cut(s)	727
Eco130I	CCWWGG	1 cut(s)	991
Eco24I	GRGCYC	2 cut(s)	281, 729
Eco47I	GGWCC	4 cut(s)	434, 863, 1265, 1331
Eco53kI	GAGCTC	1 cut(s)	727
Eco57I	CTGAAG	2 cut(s)	1097, 1716
EcoICRI	GAGCTC	1 cut(s)	727
EcoO109I	RGGNCCY	2 cut(s)	278, 863
EcoRII	CCWGG	3 cut(s)	811, 1030, 1802
EcoT14I	CCWWGG	1 cut(s)	991
EcoT38I	GRGCYC	2 cut(s)	281, 729
ErhI	CCWWGG	1 cut(s)	991
FaeI	CATG	5 cut(s)	416, 826, 995, 1226, 1681
FaqI	GGGAC	1 cut(s)	420
FatI	CATG	5 cut(s)	412, 822, 991, 1222, 1677
FauI	CCCGC	4 cut(s)	168, 195, 295, 500
FauNDI	CATATG	1 cut(s)	363
Fnu4HI	GCNGC	7 cut(s)	92, 289, 324, 1254, 1551, 1910, 1928
FokI	GGATG	9 cut(s)	109, 142, 329, 461, 1350, 1645, 1688, 1786, 1801
FriOI	GRGCYC	2 cut(s)	281, 729
Fsp4HI	GCNGC	7 cut(s)	92, 289, 324, 1254, 1551, 1910, 1928
FspBI	CTAG	6 cut(s)	602, 1020, 1196, 1241, 1314, 1776
GlaI	GCGC	1 cut(s)	73
GluI	GCNGC	7 cut(s)	92, 289, 324, 1254, 1551, 1910, 1928
GsuI	CTGGAG	3 cut(s)	47, 604, 918
HaeIII	GGCC	6 cut(s)	279, 323, 808, 943, 986, 1682
HapII	CCGG	7 cut(s)	133, 317, 432, 921, 1334, 1881, 1913
HgaI	GACGC	2 cut(s)	197, 1542
HhaI	GCGC	1 cut(s)	74
Hin1I	GRCGYC	2 cut(s)	189, 1553
Hin1II	CATG	5 cut(s)	416, 826, 995, 1226, 1681
Hin6I	GCGC	1 cut(s)	72
HinP1I	GCGC	1 cut(s)	72
HincII	GTYRAC	2 cut(s)	1510, 1561
HindII	GTYRAC	2 cut(s)	1510, 1561
HinfI	GANTC	4 cut(s)	293, 428, 1237, 1320
HpaI	GTTAAC	1 cut(s)	1510
HpaII	CCGG	7 cut(s)	133, 317, 432, 921, 1334, 1881, 1913
HphI	GGTGA	5 cut(s)	320, 785, 1019, 1160, 1878
Hpy166II	GTNNAC	4 cut(s)	763, 1510, 1561, 1877
Hpy188III	TCNNGA	8 cut(s)	64, 331, 533, 545, 554, 652, 897, 1770
Hpy8I	GTNNAC	4 cut(s)	763, 1510, 1561, 1877
Hpy99I	CGWCG	3 cut(s)	10, 191, 197
HpyAV	CCTTC	6 cut(s)	57, 292, 833, 1172, 1273, 1671
HpyCH4III	ACNGT	7 cut(s)	398, 589, 633, 1102, 1374, 1568, 1811
HpyCH4IV	ACGT	3 cut(s)	1117, 1512, 1863
HpyCH4V	TGCA	9 cut(s)	668, 683, 794, 1232, 1256, 1418, 1877, 1903, 1927
HpyF10VI	GCNNNNNNNGC	4 cut(s)	285, 1250, 1720, 1909
HpyF3I	CTNAG	3 cut(s)	935, 1001, 1673
HpySE526I	ACGT	3 cut(s)	1117, 1512, 1863
Hsp92I	GRCGYC	2 cut(s)	189, 1553
Hsp92II	CATG	5 cut(s)	416, 826, 995, 1226, 1681
HspAI	GCGC	1 cut(s)	72
KspAI	GTTAAC	1 cut(s)	1510
LmnI	GCTCC	4 cut(s)	256, 538, 611, 952
Lsp1109I	GCAGC	4 cut(s)	103, 275, 1240, 1921
LweI	GCATC	4 cut(s)	172, 961, 1427, 1808
MaeI	CTAG	6 cut(s)	602, 1020, 1196, 1241, 1314, 1776
MaeII	ACGT	3 cut(s)	1117, 1512, 1863
MaeIII	GTNAC	1 cut(s)	1118
MbiI	CCGCTC	2 cut(s)	202, 326
MboII	GAAGA	7 cut(s)	46, 223, 386, 779, 957, 1202, 1632
MfeI	CAATTG	2 cut(s)	834, 1529
MflI	RGATCY	5 cut(s)	58, 313, 353, 842, 1772
MhlI	GDGCHC	3 cut(s)	281, 729, 1879
MlyI	GAGTC	2 cut(s)	437, 1246
MmeI	TCCRAC	2 cut(s)	106, 278
MroXI	GAANNNNTTC	1 cut(s)	561
MseI	TTAA	4 cut(s)	237, 270, 977, 1509
MslI	CAYNNNNRTG	1 cut(s)	1227
MspI	CCGG	7 cut(s)	133, 317, 432, 921, 1334, 1881, 1913
MspR9I	CCNGG	6 cut(s)	318, 813, 1032, 1335, 1804, 1881
MunI	CAATTG	2 cut(s)	834, 1529
MvaI	CCWGG	3 cut(s)	813, 1032, 1804
MvnI	CGCG	3 cut(s)	72, 302, 507
MwoI	GCNNNNNNNGC	4 cut(s)	285, 1250, 1720, 1909
NciI	CCSGG	3 cut(s)	318, 1335, 1881
NcoI	CCATGG	1 cut(s)	991
NdeI	CATATG	1 cut(s)	363
NlaIII	CATG	5 cut(s)	416, 826, 995, 1226, 1681
NlaIV	GGNNCC	9 cut(s)	137, 252, 279, 280, 315, 322, 436, 987, 1267
NmuCI	GTSAC	1 cut(s)	1118
NspV	TTCGAA	2 cut(s)	296, 744
PcsI	WCGNNNNNNNCGW	1 cut(s)	709
PdmI	GAANNNNTTC	1 cut(s)	561
PfeI	GAWTC	2 cut(s)	293, 1320
PflFI	GACNNNGTC	1 cut(s)	259
PflMI	CCANNNNNTGG	1 cut(s)	1275
PfoI	TCCNGGA	1 cut(s)	1333
PkrI	GCNGC	7 cut(s)	93, 290, 325, 1255, 1552, 1911, 1929
PleI	GAGTC	2 cut(s)	436, 1245
PpsI	GAGTC	2 cut(s)	436, 1245
PpuMI	RGGWCCY	1 cut(s)	863
Psp124BI	GAGCTC	1 cut(s)	729
Psp5II	RGGWCCY	1 cut(s)	863
Psp6I	CCWGG	3 cut(s)	811, 1030, 1802
PspGI	CCWGG	3 cut(s)	811, 1030, 1802
PspN4I	GGNNCC	9 cut(s)	137, 252, 279, 280, 315, 322, 436, 987, 1267
PspOMI	GGGCCC	1 cut(s)	277
PspPI	GGNCC	8 cut(s)	277, 278, 321, 434, 863, 985, 1265, 1331
PspPPI	RGGWCCY	1 cut(s)	863
PsuI	RGATCY	5 cut(s)	58, 313, 353, 842, 1772
PsyI	GACNNNGTC	1 cut(s)	259
RsaI	GTAC	1 cut(s)	1456
RsaNI	GTAC	1 cut(s)	1455
RseI	CAYNNNNRTG	1 cut(s)	1227
SacI	GAGCTC	1 cut(s)	729
SaqAI	TTAA	4 cut(s)	237, 270, 977, 1509
SatI	GCNGC	7 cut(s)	92, 289, 324, 1254, 1551, 1910, 1928
Sau96I	GGNCC	8 cut(s)	277, 278, 321, 434, 863, 985, 1265, 1331
SchI	GAGTC	2 cut(s)	437, 1246
ScrFI	CCNGG	6 cut(s)	318, 813, 1032, 1335, 1804, 1881
SduI	GDGCHC	3 cut(s)	281, 729, 1879
SfaNI	GCATC	4 cut(s)	172, 961, 1427, 1808
SfcI	CTRYAG	1 cut(s)	1101
SfuI	TTCGAA	2 cut(s)	296, 744
SinI	GGWCC	4 cut(s)	434, 863, 1265, 1331
SmiMI	CAYNNNNRTG	1 cut(s)	1227
SmlI	CTYRAG	1 cut(s)	329
SmoI	CTYRAG	1 cut(s)	329
SpeI	ACTAGT	1 cut(s)	1195
SsiI	CCGC	8 cut(s)	161, 202, 302, 324, 507, 592, 1202, 1550
SspMI	CTAG	6 cut(s)	602, 1020, 1196, 1241, 1314, 1776
SstI	GAGCTC	1 cut(s)	729
StyD4I	CCNGG	6 cut(s)	316, 811, 1030, 1333, 1802, 1879
StyI	CCWWGG	1 cut(s)	991
TaaI	ACNGT	7 cut(s)	398, 589, 633, 1102, 1374, 1568, 1811
TaiI	ACGT	3 cut(s)	1120, 1515, 1866
TaqI	TCGA	5 cut(s)	296, 703, 744, 1246, 1769
TaqII	GACCGA	1 cut(s)	1886
TatI	WGTACW	1 cut(s)	1454
TauI	GCSGC	2 cut(s)	326, 1553
TfiI	GAWTC	2 cut(s)	293, 1320
Tru1I	TTAA	4 cut(s)	237, 270, 977, 1509
Tru9I	TTAA	4 cut(s)	237, 270, 977, 1509
TscAI	CASTG	1 cut(s)	1662
TseFI	GTSAC	1 cut(s)	1118
TseI	GCWGC	5 cut(s)	91, 288, 1253, 1909, 1927
Tsp45I	GTSAC	1 cut(s)	1118
TspDTI	ATGAA	7 cut(s)	144, 463, 839, 1167, 1560, 1803, 1833
TspGWI	ACGGA	1 cut(s)	366
TspRI	CASTG	1 cut(s)	1662
Tth111I	GACNNNGTC	1 cut(s)	259
Van91I	CCANNNNNTGG	1 cut(s)	1275
VneI	GTGCAC	1 cut(s)	1875
VpaK11BI	GGWCC	4 cut(s)	434, 863, 1265, 1331
XapI	RAATTY	4 cut(s)	748, 907, 1612, 1755
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1787
XmnI	GAANNNNTTC	1 cut(s)	561
XspI	CTAG	6 cut(s)	602, 1020, 1196, 1241, 1314, 1776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.