Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005754

Physical Location & Seq

Genomic Coordinates Reverse (-)

33236261 .. 33240121

Gene Structure 3861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG312100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGGGGGAGGCATCAGAAACGACGATGACGATAATGAACAATCAAGCCCCTCCTAAAAAGAAGAAGGGCCGACCTTCGCTTCTCGATCTCCAGAAGCGCTTCCTCCAGCAGCAGCAAAACCCCCATTTCCTCAACCCTAGCGCCGCCGCCGCCCGCCCCGCCACTCGCCGCAGCACCAACCCTAACGCTCCTCCTCCGCCGGACGACGACGACGACGACGACGACGAGCGCGCCAAGAAGAAGCACAAGCTCCTCCTCGGAATCAACCACCAACACCACAATCGCAAACCGACATTGTCGCCGTTCAATTCCGGCCCCTACGGCTCCGATTCCAATGCCGACGACGACGATCCGGACAAGATCGGATCCAATCATACGAGCCAAAGCGTGTTGAAAGCGACTGACAGTAGCAGTATTCATGGGACGCAGGTGGAGTTTGGTCCCACTACGCCTTTGCCAGACAAAAAGTTGTTGGTGTTCATCCTTGATAGGCTTCAAAAAAAGGACACTCGTGGAGTGTTTTCGGAGCCTGTGGATCCAGAAGAGCTGCCTGATTATCATGAAATCATTGAAAACCCGATGGATTTTGGAACTGTCAGGGAGAAACTGGATCAGGGAGCCTATGCCAACTTGGAACGGTTTGAGAAAGATGTCTTCTTGATATCTTCAAATGCAATGCAGTATAATGCACCAGACACGATTTATTTCCGACAGGCACGGTCTATCCAAGAACTTGCGAAAAAGGACTTTGAAAATTTGAGGCAAGACAACACCGGTGATGGTGGCGAGCCCAAACCAAAAGTTGCCAGGAGAGGCAGGCCACCTGGCAGCAAGACCATGAAAAAGTCGATTGACTTGGCTCCAGTTGAACGTCTTGGTCCTCAATATTTCTCAGAAACGACTCTTCCCCCTGGAGGAGAGACTTCGAGCTTGTCCAATAGTTACAATCTGAGAAAAGGACCCGCTTCATACAAGTTTAGGACTGCTGATGCATTGAACAGAGCTCCACATGGATCTCTTGGTGGTGATACTAATGCTAACTGGTTGTCTGAATTGGAGAATGAATTTCCGGCTTCAGTATTGAGGAGCGTGCTAAGGTATGGAAAGAAACAGTTTCCAGTAGACGAGAACAGACGTGAAACCTATAGGCAGTCTCTGGCTTCAGAACATGAACCATCTGAACTTACTGGTCTCGAAGGGGAGTGGAACCAACTTATGGCGGTAGGTGTAGCTGCGGAGGAGCATGGTTATGCAAGAAGTATGGCTCGATTTGCTGCAAATCTTGGACCTGTTGCTTGGAAGATTGCTTCTAAGCGGATAGGAAGTGTTTTGCCTATTGGAGTTGAGTTTGGTCCTGGATGGGTAGGAGAAAATGAGTCATCAAGGTTGCAGCAGTTCTCATTCCGTCAGGGAGAGGATAAGGTTCAATGCAACCCTGCATCTGATGACCATAAAGACAGACTTCGATGTCAAAGTACATCAGGCCTAAATTCTGTTGCAGATAGATATTTGCTGCAAAACGGTGTTAACATGGAAAACTGTAGAGAATTCAATTCCCAAAATGGGTTGGCATCACTTAACAGTGGTGTTAGTGGGATACGACCTGTGCCTCCTTCCCAGAATTCCATGATTCACTCTGGTAATCCTGGTTTGAATAGTAGGTTTATGTCTAGTGTTTTACCTCAACCTGAGAATGTTAATATGCGTGCCACATTAACAGGGATCTCAAGTTCGACCAACACTTCAGTACCTTCTCATCATCAAATGGTCGGCATGTTTTCAGAGAGGAATATGAACACACAGTCGATGCCTACAGGCGATATTGATTCAAATGAAGCCAGATCAGAAATTTCAAGTAGATCAAGGAATCCCTTAGCCCAAGCACAACCTCAATTGGCGTATGGTGGGGAAACTTCTTGGCAGGGTTTATCGATGAACAATAAACAGGTTTCTTATTCATTACCCCCGGACCTGAATGTTGAATTCGGTGCACCAGGCTCTCCCAGTTCTCTTATTCAAATTGGCATGCCACAGCAACCAGATTTAGCTTTGCAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

686

Amino Acids

75.53

Weight (kDa)

6.16

Isoelectric Point (pI)

48.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	161 - 240	3.4e-22	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20670 AT1G76380 AT1G76380 AT1G76380
fragaria_vesca	FvH4_5g24560 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400
malus_domestica	MD06G1010000.v1.1 MD16G1284400.v1.1
prunus_persica	Prupe.5G010200_v2.0.a1
pyrus_communis	pycom06g00820 pycom16g25950
rosa_chinensis	RchiOBHm_Chr7g0215631
rosa_laevigata	RLG00000002637
rosa_multiflora	Rmu_sc0000898.1_g000040 Rmu_sc0007602.1_g000008
rosa_roxburghii	Rroxscaffold_3G00243980
rosa_rugosa	Rorug07G0155700 Rorug07G0155700
rosa_samantha	Rh7AG292100 Rh7BG284700 Rh7CG312100 Rh7DG295500
rosa_wichuraiana	Rw7G024880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	418
AasI	GACNNNNNNGTC	1 cut(s)	1467
Acc36I	ACCTGC	1 cut(s)	418
AccB7I	CCANNNNNTGG	1 cut(s)	1216
AccI	GTMKAC	1 cut(s)	1122
AccII	CGCG	1 cut(s)	231
AccIII	TCCGGA	1 cut(s)	352
AclWI	GGATC	8 cut(s)	344, 360, 373, 530, 543, 618, 1021, 1730
AcsI	RAATTY	7 cut(s)	754, 1064, 1489, 1547, 1621, 1848, 1982
AcuI	CTGAAG	3 cut(s)	1059, 1146, 1728
AfaI	GTAC	2 cut(s)	1477, 1749
AfeI	AGCGCT	1 cut(s)	98
AfiI	CCNNNNNNNGG	3 cut(s)	914, 1216, 1563
AgeI	ACCGGT	1 cut(s)	773
AjiI	CACGTC	1 cut(s)	1136
AjnI	CCWGG	6 cut(s)	806, 823, 910, 1354, 1645, 1993
AloI	GAACNNNNNNTCC	2 cut(s)	1714, 1746
AluBI	AGCT	6 cut(s)	250, 547, 930, 1004, 1232, 2048
AluI	AGCT	6 cut(s)	250, 547, 930, 1004, 1232, 2048
Alw21I	GWGCWC	2 cut(s)	1006, 1993
Alw26I	GTCTC	3 cut(s)	914, 1158, 1196
Alw44I	GTGCAC	1 cut(s)	1989
AlwI	GGATC	8 cut(s)	344, 360, 373, 530, 543, 618, 1021, 1730
AlwNI	CAGNNNCTG	1 cut(s)	1156
Aor13HI	TCCGGA	1 cut(s)	352
Aor51HI	AGCGCT	1 cut(s)	98
AoxI	GGCC	4 cut(s)	67, 313, 818, 1483
ApaLI	GTGCAC	1 cut(s)	1989
ApeKI	GCWGC	9 cut(s)	109, 112, 171, 547, 828, 1232, 1274, 1390, 1513
ApoI	RAATTY	7 cut(s)	754, 1064, 1489, 1547, 1621, 1848, 1982
AsiGI	ACCGGT	1 cut(s)	773
Asp700I	GAANNNNTTC	1 cut(s)	98
AspLEI	GCGC	4 cut(s)	99, 143, 231, 233
AspS9I	GGNCC	8 cut(s)	67, 314, 440, 878, 959, 1286, 1352, 1969
AsuC2I	CCSGG	1 cut(s)	1967
AsuHPI	GGTGA	2 cut(s)	788, 1037
AvaII	GGWCC	6 cut(s)	440, 878, 959, 1286, 1352, 1969
BaeGI	GKGCMC	1 cut(s)	1993
BaeI	ACNNNNGTAYC	2 cut(s)	1731, 1764
BamHI	GGATCC	2 cut(s)	365, 535
BanII	GRGCYC	2 cut(s)	792, 1006
BauI	CACGAG	1 cut(s)	510
BbsI	GAAGAC	1 cut(s)	646
Bbv12I	GWGCWC	2 cut(s)	1006, 1993
BbvI	GCAGC	9 cut(s)	121, 124, 183, 534, 840, 1219, 1261, 1402, 1500
BccI	CCATC	4 cut(s)	574, 773, 1183, 1353
BceAI	ACGGC	2 cut(s)	286, 337
BcgI	CGANNNNNNTGC	2 cut(s)	317, 351
BciT130I	CCWGG	6 cut(s)	808, 825, 912, 1356, 1647, 1995
BciVI	GTATCC	1 cut(s)	1590
BcnI	CCSGG	1 cut(s)	1967
BcoDI	GTCTC	3 cut(s)	914, 1158, 1196
BfaI	CTAG	2 cut(s)	138, 1671
BfmI	CTRYAG	3 cut(s)	1144, 1540, 1812
BfoI	RGCGCY	2 cut(s)	100, 144
BfuAI	ACCTGC	1 cut(s)	418
BfuI	GTATCC	1 cut(s)	1590
BglI	GCCNNNNNGGC	1 cut(s)	321
Bme1390I	CCNGG	7 cut(s)	808, 825, 912, 1356, 1647, 1967, 1995
Bme18I	GGWCC	6 cut(s)	440, 878, 959, 1286, 1352, 1969
BmgBI	CACGTC	1 cut(s)	1136
BmgT120I	GGNCC	8 cut(s)	67, 314, 440, 878, 959, 1286, 1352, 1969
BmrFI	CCNGG	7 cut(s)	808, 825, 912, 1356, 1647, 1967, 1995
BmrI	ACTGGG	1 cut(s)	1998
BmsI	GCATC	5 cut(s)	20, 979, 1448, 1580, 1797
BmuI	ACTGGG	1 cut(s)	1998
BpiI	GAAGAC	1 cut(s)	646
BpmI	CTGGAG	4 cut(s)	74, 89, 846, 933
Bpu10I	CCTNAGC	2 cut(s)	1094, 1873
BpuEI	CTTGAG	1 cut(s)	1711
BpuMI	CCSGG	1 cut(s)	1967
Bsa29I	ATCGAT	1 cut(s)	1931
BsaI	GGTCTC	1 cut(s)	1196
BsaJI	CCNNGG	3 cut(s)	256, 910, 1965
BsaWI	WCCGGW	2 cut(s)	352, 773
Bsc4I	CCNNNNNNNGG	3 cut(s)	914, 1216, 1563
Bse118I	RCCGGY	1 cut(s)	773
Bse1I	ACTGG	6 cut(s)	612, 863, 1046, 1118, 1192, 2004
Bse3DI	GCAATG	1 cut(s)	681
BseAI	TCCGGA	1 cut(s)	352
BseBI	CCWGG	6 cut(s)	808, 825, 912, 1356, 1647, 1995
BseCI	ATCGAT	1 cut(s)	1931
BseDI	CCNNGG	3 cut(s)	256, 910, 1965
BseGI	GGATG	2 cut(s)	480, 1364
BseLI	CCNNNNNNNGG	3 cut(s)	914, 1216, 1563
BseMI	GCAATG	1 cut(s)	681
BseMII	CTCAG	3 cut(s)	906, 941, 1680
BseNI	ACTGG	6 cut(s)	612, 863, 1046, 1118, 1192, 2004
BsePI	GCGCGC	1 cut(s)	229
BseRI	GAGGAG	7 cut(s)	180, 183, 242, 245, 930, 1099, 1253
BseSI	GKGCMC	1 cut(s)	1993
BseXI	GCAGC	9 cut(s)	121, 124, 183, 534, 840, 1219, 1261, 1402, 1500
Bsh1236I	CGCG	1 cut(s)	231
BshFI	GGCC	4 cut(s)	69, 315, 820, 1485
BshTI	ACCGGT	1 cut(s)	773
BshVI	ATCGAT	1 cut(s)	1931
BsiHKAI	GWGCWC	2 cut(s)	1006, 1993
BsiSI	CCGG	6 cut(s)	200, 312, 353, 774, 1070, 1967
BslFI	GGGAC	2 cut(s)	426, 436
BslI	CCNNNNNNNGG	3 cut(s)	914, 1216, 1563
BsmAI	GTCTC	3 cut(s)	914, 1158, 1196
BsmFI	GGGAC	2 cut(s)	426, 436
BsnI	GGCC	4 cut(s)	69, 315, 820, 1485
Bso31I	GGTCTC	1 cut(s)	1196
Bsp1286I	GDGCHC	3 cut(s)	792, 1006, 1993
Bsp13I	TCCGGA	1 cut(s)	352
BspANI	GGCC	4 cut(s)	69, 315, 820, 1485
BspCNI	CTCAG	3 cut(s)	905, 942, 1681
BspDI	ATCGAT	1 cut(s)	1931
BspEI	TCCGGA	1 cut(s)	352
BspFNI	CGCG	1 cut(s)	231
BspHI	TCATGA	1 cut(s)	559
BspMI	ACCTGC	1 cut(s)	418
BspPI	GGATC	8 cut(s)	344, 360, 373, 530, 543, 618, 1021, 1730
BspQI	GCTCTTC	1 cut(s)	537
BspTNI	GGTCTC	1 cut(s)	1196
BsrDI	GCAATG	1 cut(s)	681
BsrFI	RCCGGY	1 cut(s)	773
BsrI	ACTGG	6 cut(s)	612, 863, 1046, 1118, 1192, 2004
BssAI	RCCGGY	1 cut(s)	773
BssECI	CCNNGG	3 cut(s)	256, 910, 1965
BssHII	GCGCGC	1 cut(s)	229
BssSI	CACGAG	1 cut(s)	510
Bst2BI	CACGAG	1 cut(s)	510
Bst2UI	CCWGG	6 cut(s)	808, 825, 912, 1356, 1647, 1995
Bst4CI	ACNGT	9 cut(s)	407, 595, 639, 720, 1113, 1523, 1541, 1583, 1803
Bst6I	CTCTTC	2 cut(s)	537, 909
BstC8I	GCNNGC	7 cut(s)	154, 231, 788, 818, 1091, 1707, 2027
BstDEI	CTNAG	6 cut(s)	892, 950, 1094, 1311, 1689, 1873
BstF5I	GGATG	2 cut(s)	480, 1364
BstFNI	CGCG	1 cut(s)	231
BstH2I	RGCGCY	2 cut(s)	100, 144
BstHHI	GCGC	4 cut(s)	99, 143, 231, 233
BstMAI	GTCTC	3 cut(s)	914, 1158, 1196
BstMWI	GCNNNNNNNGC	4 cut(s)	149, 158, 321, 1271
BstNI	CCWGG	6 cut(s)	808, 825, 912, 1356, 1647, 1995
BstNSI	RCATGY	2 cut(s)	1777, 2029
BstSCI	CCNGG	7 cut(s)	806, 823, 910, 1354, 1645, 1965, 1993
BstSFI	CTRYAG	3 cut(s)	1144, 1540, 1812
BstSLI	GKGCMC	1 cut(s)	1993
BstUI	CGCG	1 cut(s)	231
BstV1I	GCAGC	9 cut(s)	121, 124, 183, 534, 840, 1219, 1261, 1402, 1500
BstV2I	GAAGAC	1 cut(s)	646
BstX2I	RGATCY	4 cut(s)	365, 535, 1013, 1722
BstYI	RGATCY	4 cut(s)	365, 535, 1013, 1722
Bsu15I	ATCGAT	1 cut(s)	1931
BsuI	GTATCC	1 cut(s)	1590
BsuRI	GGCC	4 cut(s)	69, 315, 820, 1485
BsuTUI	ATCGAT	1 cut(s)	1931
BtrI	CACGTC	1 cut(s)	1136
BtsCI	GGATG	2 cut(s)	480, 1364
BtsIMutI	CAGTG	1 cut(s)	1588
BveI	ACCTGC	1 cut(s)	418
Cac8I	GCNNGC	7 cut(s)	154, 231, 788, 818, 1091, 1707, 2027
CaiI	CAGNNNCTG	1 cut(s)	1156
CciI	TCATGA	1 cut(s)	559
CfoI	GCGC	4 cut(s)	99, 143, 231, 233
Cfr10I	RCCGGY	1 cut(s)	773
Cfr13I	GGNCC	8 cut(s)	67, 314, 440, 878, 959, 1286, 1352, 1969
ClaI	ATCGAT	1 cut(s)	1931
CseI	GACGC	1 cut(s)	433
Csp6I	GTAC	2 cut(s)	1476, 1748
CspAI	ACCGGT	1 cut(s)	773
CviQI	GTAC	2 cut(s)	1476, 1748
DdeI	CTNAG	6 cut(s)	892, 950, 1094, 1311, 1689, 1873
DrdI	GACNNNNNNGTC	1 cut(s)	1467
DseDI	GACNNNNNNGTC	1 cut(s)	1467
Eam1104I	CTCTTC	2 cut(s)	537, 909
EarI	CTCTTC	2 cut(s)	537, 909
EciI	GGCGGA	1 cut(s)	186
Ecl136II	GAGCTC	1 cut(s)	1004
Eco147I	AGGCCT	1 cut(s)	1485
Eco24I	GRGCYC	2 cut(s)	792, 1006
Eco31I	GGTCTC	1 cut(s)	1196
Eco32I	GATATC	1 cut(s)	663
Eco47I	GGWCC	6 cut(s)	440, 878, 959, 1286, 1352, 1969
Eco47III	AGCGCT	1 cut(s)	98
Eco53kI	GAGCTC	1 cut(s)	1004
Eco57I	CTGAAG	3 cut(s)	1059, 1146, 1728
EcoICRI	GAGCTC	1 cut(s)	1004
EcoO109I	RGGNCCY	1 cut(s)	959
EcoRI	GAATTC	3 cut(s)	1547, 1621, 1982
EcoRII	CCWGG	6 cut(s)	806, 823, 910, 1354, 1645, 1993
EcoRV	GATATC	1 cut(s)	663
EcoT22I	ATGCAT	1 cut(s)	994
EcoT38I	GRGCYC	2 cut(s)	792, 1006
FalI	AAGNNNNNCTT	2 cut(s)	1446, 1478
FaqI	GGGAC	2 cut(s)	426, 436
FauI	CCCGC	3 cut(s)	161, 166, 970
FblI	GTMKAC	1 cut(s)	1122
FokI	GGATG	2 cut(s)	467, 1371
FriOI	GRGCYC	2 cut(s)	792, 1006
FspBI	CTAG	2 cut(s)	138, 1671
GlaI	GCGC	4 cut(s)	98, 142, 230, 232
GsuI	CTGGAG	4 cut(s)	74, 89, 846, 933
HaeII	RGCGCY	2 cut(s)	100, 144
HaeIII	GGCC	4 cut(s)	69, 315, 820, 1485
HapII	CCGG	6 cut(s)	200, 312, 353, 774, 1070, 1967
HgaI	GACGC	1 cut(s)	433
HhaI	GCGC	4 cut(s)	99, 143, 231, 233
Hin6I	GCGC	4 cut(s)	97, 141, 229, 231
HinP1I	GCGC	4 cut(s)	97, 141, 229, 231
HincII	GTYRAC	1 cut(s)	1528
HindII	GTYRAC	1 cut(s)	1528
HinfI	GANTC	7 cut(s)	261, 329, 901, 1376, 1630, 1826, 1867
HpaI	GTTAAC	1 cut(s)	1528
HpaII	CCGG	6 cut(s)	200, 312, 353, 774, 1070, 1967
HphI	GGTGA	2 cut(s)	788, 1037
Hpy166II	GTNNAC	3 cut(s)	1123, 1528, 1991
Hpy188III	TCNNGA	7 cut(s)	83, 91, 353, 539, 560, 658, 1193
Hpy8I	GTNNAC	3 cut(s)	1123, 1528, 1991
HpyAV	CCTTC	5 cut(s)	58, 84, 1190, 1623, 1761
HpyCH4III	ACNGT	9 cut(s)	407, 595, 639, 720, 1113, 1523, 1541, 1583, 1803
HpyCH4IV	ACGT	2 cut(s)	871, 1135
HpyF10VI	GCNNNNNNNGC	4 cut(s)	149, 158, 321, 1271
HpyF3I	CTNAG	6 cut(s)	892, 950, 1094, 1311, 1689, 1873
HpySE526I	ACGT	2 cut(s)	871, 1135
HspAI	GCGC	4 cut(s)	97, 141, 229, 231
Kpn2I	TCCGGA	1 cut(s)	352
KspAI	GTTAAC	1 cut(s)	1528
LguI	GCTCTTC	1 cut(s)	537
LmnI	GCTCC	9 cut(s)	193, 255, 329, 526, 617, 865, 1009, 1086, 1240
Lsp1109I	GCAGC	9 cut(s)	121, 124, 183, 534, 840, 1219, 1261, 1402, 1500
LweI	GCATC	5 cut(s)	20, 979, 1448, 1580, 1797
MaeI	CTAG	2 cut(s)	138, 1671
MaeII	ACGT	2 cut(s)	871, 1135
MaeIII	GTNAC	1 cut(s)	941
MboII	GAAGA	7 cut(s)	73, 250, 554, 646, 657, 896, 1312
MfeI	CAATTG	1 cut(s)	1892
MflI	RGATCY	4 cut(s)	365, 535, 1013, 1722
MhlI	GDGCHC	3 cut(s)	792, 1006, 1993
MlyI	GAGTC	2 cut(s)	895, 1385
MmeI	TCCRAC	1 cut(s)	733
Mph1103I	ATGCAT	1 cut(s)	994
MroI	TCCGGA	1 cut(s)	352
MroXI	GAANNNNTTC	1 cut(s)	98
MseI	TTAA	4 cut(s)	1527, 1578, 1698, 1715
MslI	CAYNNNNRTG	1 cut(s)	1248
MspI	CCGG	6 cut(s)	200, 312, 353, 774, 1070, 1967
MspR9I	CCNGG	7 cut(s)	808, 825, 912, 1356, 1647, 1967, 1995
MunI	CAATTG	1 cut(s)	1892
MvaI	CCWGG	6 cut(s)	808, 825, 912, 1356, 1647, 1995
MvnI	CGCG	1 cut(s)	231
MwoI	GCNNNNNNNGC	4 cut(s)	149, 158, 321, 1271
NciI	CCSGG	1 cut(s)	1967
NsiI	ATGCAT	1 cut(s)	994
NspI	RCATGY	2 cut(s)	1777, 2029
PaeI	GCATGC	1 cut(s)	2029
PagI	TCATGA	1 cut(s)	559
PaqCI	CACCTGC	1 cut(s)	418
PauI	GCGCGC	1 cut(s)	229
PceI	AGGCCT	1 cut(s)	1485
PciSI	GCTCTTC	1 cut(s)	537
PcsI	WCGNNNNNNNCGW	6 cut(s)	26, 210, 213, 216, 219, 222
PdmI	GAANNNNTTC	1 cut(s)	98
PfeI	GAWTC	5 cut(s)	261, 329, 1630, 1826, 1867
PflFI	GACNNNGTC	1 cut(s)	295
PflMI	CCANNNNNTGG	1 cut(s)	1216
PfoI	TCCNGGA	1 cut(s)	1354
PinAI	ACCGGT	1 cut(s)	773
PleI	GAGTC	2 cut(s)	895, 1384
PpsI	GAGTC	2 cut(s)	895, 1384
PpuMI	RGGWCCY	1 cut(s)	959
Psp124BI	GAGCTC	1 cut(s)	1006
Psp5II	RGGWCCY	1 cut(s)	959
Psp6I	CCWGG	6 cut(s)	806, 823, 910, 1354, 1645, 1993
PspGI	CCWGG	6 cut(s)	806, 823, 910, 1354, 1645, 1993
PspPI	GGNCC	8 cut(s)	67, 314, 440, 878, 959, 1286, 1352, 1969
PspPPI	RGGWCCY	1 cut(s)	959
PstNI	CAGNNNCTG	1 cut(s)	1156
PsuI	RGATCY	4 cut(s)	365, 535, 1013, 1722
PsyI	GACNNNGTC	1 cut(s)	295
PteI	GCGCGC	1 cut(s)	229
RsaI	GTAC	2 cut(s)	1477, 1749
RsaNI	GTAC	2 cut(s)	1476, 1748
RseI	CAYNNNNRTG	1 cut(s)	1248
SacI	GAGCTC	1 cut(s)	1006
SapI	GCTCTTC	1 cut(s)	537
SaqAI	TTAA	4 cut(s)	1527, 1578, 1698, 1715
Sau96I	GGNCC	8 cut(s)	67, 314, 440, 878, 959, 1286, 1352, 1969
SchI	GAGTC	2 cut(s)	895, 1385
ScrFI	CCNGG	7 cut(s)	808, 825, 912, 1356, 1647, 1967, 1995
SduI	GDGCHC	3 cut(s)	792, 1006, 1993
SfaNI	GCATC	5 cut(s)	20, 979, 1448, 1580, 1797
SfcI	CTRYAG	3 cut(s)	1144, 1540, 1812
SgrAI	CRCCGGYG	1 cut(s)	773
SinI	GGWCC	6 cut(s)	440, 878, 959, 1286, 1352, 1969
SmiMI	CAYNNNNRTG	1 cut(s)	1248
SmlI	CTYRAG	1 cut(s)	1726
SmoI	CTYRAG	1 cut(s)	1726
SphI	GCATGC	1 cut(s)	2029
SseBI	AGGCCT	1 cut(s)	1485
SspI	AATATT	1 cut(s)	887
SspMI	CTAG	2 cut(s)	138, 1671
SstI	GAGCTC	1 cut(s)	1006
StuI	AGGCCT	1 cut(s)	1485
StyD4I	CCNGG	7 cut(s)	806, 823, 910, 1354, 1645, 1965, 1993
TaaI	ACNGT	9 cut(s)	407, 595, 639, 720, 1113, 1523, 1541, 1583, 1803
TaiI	ACGT	2 cut(s)	874, 1138
TaqI	TCGA	9 cut(s)	84, 848, 926, 1194, 1267, 1465, 1733, 1805, 1931
TatI	WGTACW	1 cut(s)	1475
TauI	GCSGC	4 cut(s)	146, 149, 152, 171
TfiI	GAWTC	5 cut(s)	261, 329, 1630, 1826, 1867
Tru1I	TTAA	4 cut(s)	1527, 1578, 1698, 1715
Tru9I	TTAA	4 cut(s)	1527, 1578, 1698, 1715
TscAI	CASTG	1 cut(s)	1588
TseI	GCWGC	9 cut(s)	109, 112, 171, 547, 828, 1232, 1274, 1390, 1513
TspGWI	ACGGA	1 cut(s)	1394
TspRI	CASTG	1 cut(s)	1588
Tth111I	GACNNNGTC	1 cut(s)	295
Van91I	CCANNNNNTGG	1 cut(s)	1216
VneI	GTGCAC	1 cut(s)	1989
VpaK11BI	GGWCC	6 cut(s)	440, 878, 959, 1286, 1352, 1969
XapI	RAATTY	7 cut(s)	754, 1064, 1489, 1547, 1621, 1848, 1982
XceI	RCATGY	2 cut(s)	1777, 2029
XmiI	GTMKAC	1 cut(s)	1122
XmnI	GAANNNNTTC	1 cut(s)	98
XspI	CTAG	2 cut(s)	138, 1671
Zsp2I	ATGCAT	1 cut(s)	994

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.