Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0005754

Physical Location & Seq

Genomic Coordinates Reverse (-)

30997101 .. 31000922

Gene Structure 3822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G024880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGGGGAGGCATCAGAAACGACGATGACGATAATGAACAATCAAGCCCCTCCTAAAAAGAAGAAGGGCCGACCTTCGCTTCTCGATCTCCAGAAGCGCTTCCTCCAGCAGCAGCAAAACCCCCATTTTCTCAACCCTAGCGCCGCCCGCCCCGCCACTCGCCGCAGCACCAACCCTAACGCCCCTCCTCCGCCGGACGACGACGACGACGACGATGACGAGCGTGCCAAGAAGAAGCACAAGCTCCTCCTCGGAATCAACCACCAACACCACAATCGCAAACCGACATTGTCGCCGTTCAATTCCGGCCCCTACGGCTCCGATTCCAATGCCGACGACGACGATCCGGACAAGATCGGATCCAATCATACGAGCCAAAGCGTGTTGAAAGCGACTGACAGTAGCAGTATTCATGGGACGCAGGTGGAGTTTGGTCCCACTACGCCTTTGCCAGACAAAAAGTTGTTGGTGTTCATCCTTGATAGGCTTCAAAAAAAGGACACTCGTGGAGTGTTTTCGGAGCCTGTGGATCCAGAAGAGCTGCCTGATTATCATGAAATCATTGAAAACCCGATGGATTTTGGAACTGTCAGGGAGAAACTGGATCAGGGAGCCTATGCCAGCTTGGAACAGTTTGAGAAAGATGTCTTCTTGATATCTTCAAATGCAATGCAGTATAATGCACCAGACACGATTTATTTCCGACAGGCACGGTCTATCCAAGAACTTGCAAAAAAGGACTTTGAAAATTTGAGGCAAGACAACACCGGGGATGGTGGTGAGCCCAAACCAAAAGTTGCCAGGAGAGGCAGGCCACCTGGCAGCAAGACCATGAAAAAGTCGATTGACTTGGCTCCAGTTGAACGTCTTGGTCCTCAATATTTCTCAGAAACGACTCTTCCCCCTGGAGGAGAGACTTCGAGCTTGTCCAATAGTTACAATTTGAGAAAAGGACCCGCTTCATACAAGTTTAGGACTGCTGATGCATTAAATAGAGCTCCACATGGATCTCTTGGTGGTGATACTAATGCCAACTGGTTGTCTGAATTGGAGAATGAATTTCCGGCTTCAGTATTGAGGAGTGTGCTAAGGTACGGAAAGAAACAGTTTCCAGTAGACGAGAACAGACGTGAAACCTATAGGCAGTCTCTGGCTTCAGAACATGAACCATCTGAACTTACTGGTCTCGAAGGGGAGTGGAACCAACTTATGGCGGTAGGTGTAGCTGCGGAGGAGCATGGTTATGCAAGAAGTATGGCTCGATTTGCTGCAAATCTTGGACCTGTTGCTTGGAAGATTGCTTCTAAGCGGATAGGAAGTGTTTTACCTATTGGAGTTGAGTTTGGTCCTGGATGGGTAGGAGAAAATGAGTCATCAAGGTTGCAGCAGTTTTCATTCCGTCAGGGAGAGGATAAGGTTCAATGCAACCCTGCATCTGATGACCATAAAGACAGACTTCGATGTCAAAGTACATCAGGCCTAAATTCTGTTGCAGATAGATATTTGCTGCAAAACGGTGTTAACATGGAAAACTGTAGAGAATTCAATTCCCAAAATGGGTTGGCATCACTTAACAGTGGTGTTATTGGGATACGACCTGTGCCTCCTTTCCAGAATTCCATGATTCACTCTGGGATGTCAAGTTCGACCAACACTTCAGTACCTTCTCATCATCAAATGGTCGGCATGTTTTCAGAAAGGAATATGAACACACAGTTGATGCCTATAGGAGATATTGATTCAAATGAAGCCAGATCAGAAATTTCAAGTAGATCAAGGAATCCCTTAGCCCAAGCACAACCTCAATTGGCGTATGGTGGGGAAACTTCTTGGCAGGGTTTATCGATGAACAATAAACAGGTTTCTTATTCATTACCCCCGGACCTGAATGTTGAATTCGGTGCGCCAGGCTCTCCCAGTTCTCTTATTCAAATTGGCATGCCACAGCAACCAGATTTAGCTTTGCAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

657

Amino Acids

72.56

Weight (kDa)

5.98

Isoelectric Point (pI)

48.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	159 - 238	6.4e-23	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20670 AT1G76380 AT1G76380 AT1G76380
fragaria_vesca	FvH4_5g24560 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400
malus_domestica	MD06G1010000.v1.1 MD16G1284400.v1.1
prunus_persica	Prupe.5G010200_v2.0.a1
pyrus_communis	pycom06g00820 pycom16g25950
rosa_chinensis	RchiOBHm_Chr7g0215631
rosa_laevigata	RLG00000002637
rosa_multiflora	Rmu_sc0000898.1_g000040 Rmu_sc0007602.1_g000008
rosa_roxburghii	Rroxscaffold_3G00243980
rosa_rugosa	Rorug07G0155700 Rorug07G0155700
rosa_samantha	Rh7AG292100 Rh7BG284700 Rh7CG312100 Rh7DG295500
rosa_wichuraiana	Rw7G024880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	412
AasI	GACNNNNNNGTC	1 cut(s)	1461
Acc36I	ACCTGC	1 cut(s)	412
AccB7I	CCANNNNNTGG	1 cut(s)	1210
AccI	GTMKAC	1 cut(s)	1116
AccIII	TCCGGA	1 cut(s)	346
AciI	CCGC	9 cut(s)	144, 148, 153, 163, 191, 957, 1214, 1229, 1309
AclWI	GGATC	7 cut(s)	338, 354, 367, 524, 537, 612, 1015
AcsI	RAATTY	7 cut(s)	748, 1058, 1483, 1541, 1615, 1761, 1895
AcuI	CTGAAG	3 cut(s)	1053, 1140, 1641
AfaI	GTAC	3 cut(s)	1094, 1471, 1662
AfeI	AGCGCT	1 cut(s)	98
AfiI	CCNNNNNNNGG	3 cut(s)	908, 1210, 1557
AjiI	CACGTC	1 cut(s)	1130
AjnI	CCWGG	5 cut(s)	800, 817, 904, 1348, 1906
AloI	GAACNNNNNNTCC	2 cut(s)	1627, 1659
AluBI	AGCT	7 cut(s)	244, 541, 624, 924, 998, 1226, 1961
AluI	AGCT	7 cut(s)	244, 541, 624, 924, 998, 1226, 1961
Alw21I	GWGCWC	1 cut(s)	1000
Alw26I	GTCTC	3 cut(s)	908, 1152, 1190
AlwI	GGATC	7 cut(s)	338, 354, 367, 524, 537, 612, 1015
AlwNI	CAGNNNCTG	1 cut(s)	1150
Aor13HI	TCCGGA	1 cut(s)	346
Aor51HI	AGCGCT	1 cut(s)	98
AoxI	GGCC	4 cut(s)	67, 307, 812, 1477
ApeKI	GCWGC	9 cut(s)	109, 112, 165, 541, 822, 1226, 1268, 1384, 1507
ApoI	RAATTY	7 cut(s)	748, 1058, 1483, 1541, 1615, 1761, 1895
Asp700I	GAANNNNTTC	1 cut(s)	98
AspLEI	GCGC	3 cut(s)	99, 143, 1906
AspS9I	GGNCC	8 cut(s)	67, 308, 434, 872, 953, 1280, 1346, 1882
AsuC2I	CCSGG	2 cut(s)	769, 1880
AsuHPI	GGTGA	2 cut(s)	791, 1031
AvaII	GGWCC	6 cut(s)	434, 872, 953, 1280, 1346, 1882
BaeI	ACNNNNGTAYC	2 cut(s)	1644, 1677
BamHI	GGATCC	2 cut(s)	359, 529
BanII	GRGCYC	2 cut(s)	786, 1000
BauI	CACGAG	1 cut(s)	504
BbsI	GAAGAC	1 cut(s)	640
Bbv12I	GWGCWC	1 cut(s)	1000
BbvI	GCAGC	9 cut(s)	121, 124, 177, 528, 834, 1213, 1255, 1396, 1494
BccI	CCATC	4 cut(s)	568, 767, 1177, 1347
BceAI	ACGGC	2 cut(s)	280, 331
BcgI	CGANNNNNNTGC	2 cut(s)	311, 345
BciT130I	CCWGG	5 cut(s)	802, 819, 906, 1350, 1908
BciVI	GTATCC	1 cut(s)	1584
BcnI	CCSGG	2 cut(s)	769, 1880
BcoDI	GTCTC	3 cut(s)	908, 1152, 1190
BfaI	CTAG	1 cut(s)	138
BfmI	CTRYAG	3 cut(s)	1138, 1534, 1725
BfoI	RGCGCY	2 cut(s)	100, 144
BfuAI	ACCTGC	1 cut(s)	412
BfuI	GTATCC	1 cut(s)	1584
BglI	GCCNNNNNGGC	1 cut(s)	315
Bme1390I	CCNGG	7 cut(s)	769, 802, 819, 906, 1350, 1880, 1908
Bme18I	GGWCC	6 cut(s)	434, 872, 953, 1280, 1346, 1882
BmgBI	CACGTC	1 cut(s)	1130
BmgT120I	GGNCC	8 cut(s)	67, 308, 434, 872, 953, 1280, 1346, 1882
BmrFI	CCNGG	7 cut(s)	769, 802, 819, 906, 1350, 1880, 1908
BmrI	ACTGGG	1 cut(s)	1911
BmsI	GCATC	5 cut(s)	20, 973, 1442, 1574, 1710
BmuI	ACTGGG	1 cut(s)	1911
BpiI	GAAGAC	1 cut(s)	640
BpmI	CTGGAG	4 cut(s)	74, 89, 840, 927
Bpu10I	CCTNAGC	2 cut(s)	1088, 1786
BpuMI	CCSGG	2 cut(s)	769, 1880
Bsa29I	ATCGAT	1 cut(s)	1844
BsaI	GGTCTC	1 cut(s)	1190
BsaJI	CCNNGG	4 cut(s)	250, 768, 904, 1878
BsaWI	WCCGGW	1 cut(s)	346
Bsc4I	CCNNNNNNNGG	3 cut(s)	908, 1210, 1557
Bse1I	ACTGG	6 cut(s)	606, 857, 1040, 1112, 1186, 1917
Bse3DI	GCAATG	1 cut(s)	675
BseAI	TCCGGA	1 cut(s)	346
BseBI	CCWGG	5 cut(s)	802, 819, 906, 1350, 1908
BseCI	ATCGAT	1 cut(s)	1844
BseDI	CCNNGG	4 cut(s)	250, 768, 904, 1878
BseGI	GGATG	4 cut(s)	474, 778, 1358, 1641
BseLI	CCNNNNNNNGG	3 cut(s)	908, 1210, 1557
BseMI	GCAATG	1 cut(s)	675
BseMII	CTCAG	1 cut(s)	900
BseNI	ACTGG	6 cut(s)	606, 857, 1040, 1112, 1186, 1917
BseRI	GAGGAG	6 cut(s)	177, 236, 239, 924, 1093, 1247
BseXI	GCAGC	9 cut(s)	121, 124, 177, 528, 834, 1213, 1255, 1396, 1494
BshFI	GGCC	4 cut(s)	69, 309, 814, 1479
BshVI	ATCGAT	1 cut(s)	1844
BsiHKAI	GWGCWC	1 cut(s)	1000
BsiSI	CCGG	6 cut(s)	194, 306, 347, 768, 1064, 1880
BslFI	GGGAC	2 cut(s)	420, 430
BslI	CCNNNNNNNGG	3 cut(s)	908, 1210, 1557
BsmAI	GTCTC	3 cut(s)	908, 1152, 1190
BsmFI	GGGAC	2 cut(s)	420, 430
BsnI	GGCC	4 cut(s)	69, 309, 814, 1479
Bso31I	GGTCTC	1 cut(s)	1190
Bsp1286I	GDGCHC	2 cut(s)	786, 1000
Bsp13I	TCCGGA	1 cut(s)	346
Bsp143I	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
BspACI	CCGC	9 cut(s)	144, 148, 153, 163, 191, 957, 1214, 1229, 1309
BspANI	GGCC	4 cut(s)	69, 309, 814, 1479
BspCNI	CTCAG	1 cut(s)	899
BspDI	ATCGAT	1 cut(s)	1844
BspEI	TCCGGA	1 cut(s)	346
BspHI	TCATGA	1 cut(s)	553
BspMI	ACCTGC	1 cut(s)	412
BspPI	GGATC	7 cut(s)	338, 354, 367, 524, 537, 612, 1015
BspQI	GCTCTTC	1 cut(s)	531
BspTNI	GGTCTC	1 cut(s)	1190
BsrDI	GCAATG	1 cut(s)	675
BsrI	ACTGG	6 cut(s)	606, 857, 1040, 1112, 1186, 1917
BssECI	CCNNGG	4 cut(s)	250, 768, 904, 1878
BssMI	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
BssSI	CACGAG	1 cut(s)	504
Bst2BI	CACGAG	1 cut(s)	504
Bst2UI	CCWGG	5 cut(s)	802, 819, 906, 1350, 1908
Bst4CI	ACNGT	9 cut(s)	401, 589, 633, 714, 1107, 1517, 1535, 1577, 1716
Bst6I	CTCTTC	2 cut(s)	531, 903
BstC8I	GCNNGC	5 cut(s)	148, 225, 622, 812, 1940
BstDEI	CTNAG	4 cut(s)	886, 1088, 1305, 1786
BstF5I	GGATG	4 cut(s)	474, 778, 1358, 1641
BstH2I	RGCGCY	2 cut(s)	100, 144
BstHHI	GCGC	3 cut(s)	99, 143, 1906
BstKTI	GATC	9 cut(s)	88, 346, 357, 362, 532, 607, 1010, 1757, 1775
BstMAI	GTCTC	3 cut(s)	908, 1152, 1190
BstMBI	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
BstMWI	GCNNNNNNNGC	4 cut(s)	147, 152, 315, 1265
BstNI	CCWGG	5 cut(s)	802, 819, 906, 1350, 1908
BstNSI	RCATGY	2 cut(s)	1690, 1942
BstSCI	CCNGG	7 cut(s)	767, 800, 817, 904, 1348, 1878, 1906
BstSFI	CTRYAG	3 cut(s)	1138, 1534, 1725
BstV1I	GCAGC	9 cut(s)	121, 124, 177, 528, 834, 1213, 1255, 1396, 1494
BstV2I	GAAGAC	1 cut(s)	640
BstX2I	RGATCY	3 cut(s)	359, 529, 1007
BstYI	RGATCY	3 cut(s)	359, 529, 1007
Bsu15I	ATCGAT	1 cut(s)	1844
BsuI	GTATCC	1 cut(s)	1584
BsuRI	GGCC	4 cut(s)	69, 309, 814, 1479
BsuTUI	ATCGAT	1 cut(s)	1844
BtrI	CACGTC	1 cut(s)	1130
BtsCI	GGATG	4 cut(s)	474, 778, 1358, 1641
BtsIMutI	CAGTG	1 cut(s)	1582
BveI	ACCTGC	1 cut(s)	412
Cac8I	GCNNGC	5 cut(s)	148, 225, 622, 812, 1940
CaiI	CAGNNNCTG	1 cut(s)	1150
CciI	TCATGA	1 cut(s)	553
CfoI	GCGC	3 cut(s)	99, 143, 1906
Cfr13I	GGNCC	8 cut(s)	67, 308, 434, 872, 953, 1280, 1346, 1882
ClaI	ATCGAT	1 cut(s)	1844
CseI	GACGC	1 cut(s)	427
Csp6I	GTAC	3 cut(s)	1093, 1470, 1661
CviQI	GTAC	3 cut(s)	1093, 1470, 1661
DdeI	CTNAG	4 cut(s)	886, 1088, 1305, 1786
DpnI	GATC	9 cut(s)	87, 345, 356, 361, 531, 606, 1009, 1756, 1774
DpnII	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
DrdI	GACNNNNNNGTC	1 cut(s)	1461
DseDI	GACNNNNNNGTC	1 cut(s)	1461
Eam1104I	CTCTTC	2 cut(s)	531, 903
EarI	CTCTTC	2 cut(s)	531, 903
EciI	GGCGGA	1 cut(s)	180
Ecl136II	GAGCTC	1 cut(s)	998
Eco147I	AGGCCT	1 cut(s)	1479
Eco24I	GRGCYC	2 cut(s)	786, 1000
Eco31I	GGTCTC	1 cut(s)	1190
Eco32I	GATATC	1 cut(s)	657
Eco47I	GGWCC	6 cut(s)	434, 872, 953, 1280, 1346, 1882
Eco47III	AGCGCT	1 cut(s)	98
Eco53kI	GAGCTC	1 cut(s)	998
Eco57I	CTGAAG	3 cut(s)	1053, 1140, 1641
EcoICRI	GAGCTC	1 cut(s)	998
EcoO109I	RGGNCCY	1 cut(s)	953
EcoRI	GAATTC	3 cut(s)	1541, 1615, 1895
EcoRII	CCWGG	5 cut(s)	800, 817, 904, 1348, 1906
EcoRV	GATATC	1 cut(s)	657
EcoT22I	ATGCAT	1 cut(s)	988
EcoT38I	GRGCYC	2 cut(s)	786, 1000
FalI	AAGNNNNNCTT	2 cut(s)	1440, 1472
FaqI	GGGAC	2 cut(s)	420, 430
FauI	CCCGC	3 cut(s)	155, 160, 964
FblI	GTMKAC	1 cut(s)	1116
FokI	GGATG	4 cut(s)	461, 785, 1365, 1648
FriOI	GRGCYC	2 cut(s)	786, 1000
FspBI	CTAG	1 cut(s)	138
GlaI	GCGC	3 cut(s)	98, 142, 1905
GsuI	CTGGAG	4 cut(s)	74, 89, 840, 927
HaeII	RGCGCY	2 cut(s)	100, 144
HaeIII	GGCC	4 cut(s)	69, 309, 814, 1479
HapII	CCGG	6 cut(s)	194, 306, 347, 768, 1064, 1880
HgaI	GACGC	1 cut(s)	427
HhaI	GCGC	3 cut(s)	99, 143, 1906
Hin6I	GCGC	3 cut(s)	97, 141, 1904
HinP1I	GCGC	3 cut(s)	97, 141, 1904
HincII	GTYRAC	1 cut(s)	1522
HindII	GTYRAC	1 cut(s)	1522
HinfI	GANTC	7 cut(s)	255, 323, 895, 1370, 1624, 1739, 1780
HpaI	GTTAAC	1 cut(s)	1522
HpaII	CCGG	6 cut(s)	194, 306, 347, 768, 1064, 1880
HphI	GGTGA	2 cut(s)	791, 1031
Hpy166II	GTNNAC	2 cut(s)	1117, 1522
Hpy188III	TCNNGA	8 cut(s)	83, 91, 347, 533, 554, 652, 1187, 1612
Hpy8I	GTNNAC	2 cut(s)	1117, 1522
Hpy99I	CGWCG	9 cut(s)	25, 203, 206, 209, 212, 215, 338, 341, 344
HpyAV	CCTTC	4 cut(s)	58, 84, 1184, 1674
HpyCH4III	ACNGT	9 cut(s)	401, 589, 633, 714, 1107, 1517, 1535, 1577, 1716
HpyCH4IV	ACGT	2 cut(s)	865, 1129
HpyF10VI	GCNNNNNNNGC	4 cut(s)	147, 152, 315, 1265
HpyF3I	CTNAG	4 cut(s)	886, 1088, 1305, 1786
HpySE526I	ACGT	2 cut(s)	865, 1129
HspAI	GCGC	3 cut(s)	97, 141, 1904
Kpn2I	TCCGGA	1 cut(s)	346
KspAI	GTTAAC	1 cut(s)	1522
Kzo9I	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
LguI	GCTCTTC	1 cut(s)	531
LmnI	GCTCC	7 cut(s)	249, 323, 520, 611, 859, 1003, 1234
Lsp1109I	GCAGC	9 cut(s)	121, 124, 177, 528, 834, 1213, 1255, 1396, 1494
LweI	GCATC	5 cut(s)	20, 973, 1442, 1574, 1710
MaeI	CTAG	1 cut(s)	138
MaeII	ACGT	2 cut(s)	865, 1129
MaeIII	GTNAC	1 cut(s)	935
MalI	GATC	9 cut(s)	87, 345, 356, 361, 531, 606, 1009, 1756, 1774
MboI	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
MboII	GAAGA	7 cut(s)	73, 244, 548, 640, 651, 890, 1306
MfeI	CAATTG	1 cut(s)	1805
MflI	RGATCY	3 cut(s)	359, 529, 1007
MhlI	GDGCHC	2 cut(s)	786, 1000
MlyI	GAGTC	2 cut(s)	889, 1379
MmeI	TCCRAC	1 cut(s)	727
Mph1103I	ATGCAT	1 cut(s)	988
MroI	TCCGGA	1 cut(s)	346
MroXI	GAANNNNTTC	1 cut(s)	98
MseI	TTAA	3 cut(s)	989, 1521, 1572
MslI	CAYNNNNRTG	1 cut(s)	1242
MspI	CCGG	6 cut(s)	194, 306, 347, 768, 1064, 1880
MspR9I	CCNGG	7 cut(s)	769, 802, 819, 906, 1350, 1880, 1908
MunI	CAATTG	1 cut(s)	1805
MvaI	CCWGG	5 cut(s)	802, 819, 906, 1350, 1908
MwoI	GCNNNNNNNGC	4 cut(s)	147, 152, 315, 1265
NciI	CCSGG	2 cut(s)	769, 1880
NdeII	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
NsiI	ATGCAT	1 cut(s)	988
NspI	RCATGY	2 cut(s)	1690, 1942
PaeI	GCATGC	1 cut(s)	1942
PagI	TCATGA	1 cut(s)	553
PaqCI	CACCTGC	1 cut(s)	412
PceI	AGGCCT	1 cut(s)	1479
PciSI	GCTCTTC	1 cut(s)	531
PcsI	WCGNNNNNNNCGW	5 cut(s)	26, 204, 207, 210, 216
PdmI	GAANNNNTTC	1 cut(s)	98
PfeI	GAWTC	5 cut(s)	255, 323, 1624, 1739, 1780
PflFI	GACNNNGTC	1 cut(s)	289
PflMI	CCANNNNNTGG	1 cut(s)	1210
PfoI	TCCNGGA	1 cut(s)	1348
PleI	GAGTC	2 cut(s)	889, 1378
PpsI	GAGTC	2 cut(s)	889, 1378
PpuMI	RGGWCCY	1 cut(s)	953
Psp124BI	GAGCTC	1 cut(s)	1000
Psp5II	RGGWCCY	1 cut(s)	953
Psp6I	CCWGG	5 cut(s)	800, 817, 904, 1348, 1906
PspGI	CCWGG	5 cut(s)	800, 817, 904, 1348, 1906
PspPI	GGNCC	8 cut(s)	67, 308, 434, 872, 953, 1280, 1346, 1882
PspPPI	RGGWCCY	1 cut(s)	953
PstNI	CAGNNNCTG	1 cut(s)	1150
PsuI	RGATCY	3 cut(s)	359, 529, 1007
PsyI	GACNNNGTC	1 cut(s)	289
RsaI	GTAC	3 cut(s)	1094, 1471, 1662
RsaNI	GTAC	3 cut(s)	1093, 1470, 1661
RseI	CAYNNNNRTG	1 cut(s)	1242
SacI	GAGCTC	1 cut(s)	1000
SapI	GCTCTTC	1 cut(s)	531
SaqAI	TTAA	3 cut(s)	989, 1521, 1572
Sau3AI	GATC	9 cut(s)	85, 343, 354, 359, 529, 604, 1007, 1754, 1772
Sau96I	GGNCC	8 cut(s)	67, 308, 434, 872, 953, 1280, 1346, 1882
SchI	GAGTC	2 cut(s)	889, 1379
ScrFI	CCNGG	7 cut(s)	769, 802, 819, 906, 1350, 1880, 1908
SduI	GDGCHC	2 cut(s)	786, 1000
SfaNI	GCATC	5 cut(s)	20, 973, 1442, 1574, 1710
SfcI	CTRYAG	3 cut(s)	1138, 1534, 1725
SinI	GGWCC	6 cut(s)	434, 872, 953, 1280, 1346, 1882
SmiMI	CAYNNNNRTG	1 cut(s)	1242
SphI	GCATGC	1 cut(s)	1942
SseBI	AGGCCT	1 cut(s)	1479
SsiI	CCGC	9 cut(s)	144, 148, 153, 163, 191, 957, 1214, 1229, 1309
SspI	AATATT	1 cut(s)	881
SspMI	CTAG	1 cut(s)	138
SstI	GAGCTC	1 cut(s)	1000
StuI	AGGCCT	1 cut(s)	1479
StyD4I	CCNGG	7 cut(s)	767, 800, 817, 904, 1348, 1878, 1906
TaaI	ACNGT	9 cut(s)	401, 589, 633, 714, 1107, 1517, 1535, 1577, 1716
TaiI	ACGT	2 cut(s)	868, 1132
TaqI	TCGA	8 cut(s)	84, 842, 920, 1188, 1261, 1459, 1646, 1844
TatI	WGTACW	1 cut(s)	1469
TauI	GCSGC	2 cut(s)	146, 165
TfiI	GAWTC	5 cut(s)	255, 323, 1624, 1739, 1780
Tru1I	TTAA	3 cut(s)	989, 1521, 1572
Tru9I	TTAA	3 cut(s)	989, 1521, 1572
TscAI	CASTG	1 cut(s)	1582
TseI	GCWGC	9 cut(s)	109, 112, 165, 541, 822, 1226, 1268, 1384, 1507
TspGWI	ACGGA	2 cut(s)	1110, 1388
TspRI	CASTG	1 cut(s)	1582
Tth111I	GACNNNGTC	1 cut(s)	289
Van91I	CCANNNNNTGG	1 cut(s)	1210
VpaK11BI	GGWCC	6 cut(s)	434, 872, 953, 1280, 1346, 1882
XapI	RAATTY	7 cut(s)	748, 1058, 1483, 1541, 1615, 1761, 1895
XceI	RCATGY	2 cut(s)	1690, 1942
XmiI	GTMKAC	1 cut(s)	1116
XmnI	GAANNNNTTC	1 cut(s)	98
XspI	CTAG	1 cut(s)	138
Zsp2I	ATGCAT	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.