Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005754

Physical Location & Seq

Genomic Coordinates Reverse (-)

12342884 .. 12348860

Gene Structure 5977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0155700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGATTCGGTTGAATTGACTTATCACATGAAAGGATTTCTCAGAGCTGGAGTTACAGTCAAGGAGCTGGAGCCGTGTGACGTCGGCCGGCTTGTAAGCCCGGAGCTGTGCAGCTCATCTCGAAGTTATAAAGATGTAACAATTGGTTCTTCAAAGTCTGAATCATCTAAGCTTGATGGTCAGCATCGCAGCTATCAGGGTGAAGACTTGTCCAGGCACCTTCATGCCAGGGGCAGAAATGGGTTTTTGTTAAATCATGGCATTGAAAGTGTACAATTACAACGGAAATCAGTGAAGGTGTCGAAAACAGGTAGTTTTCCTTTTAAGAGACCACGACTCAGTCAACTAGAAGATTCAGATAGCTTAACTGGAGTTGATGGGATAAAGGACATGCCAGATAAGCTCGGCTCATATCTTGCAAAGTGCAATTCTGCAGATAAGACTCAATTGGCGAAACAAAAGACCAAATTTACAAGCAAGCGAGGTGATAAGAGAAATCACAAACTTCCTGTAAAGACTAAAAACGATTCCTTCTCTGTGAAGGCAGGTTTGGCAAGCTTCAGTTCGGCTGCAGGAGGGAACAATTTCTTTGGAGTACATGGCCTTAAGTCAGATAATCATGATGTCACAAAGCATGTAGATGATCTGCCACTGAATGAGCTTCTTGATGGCACATACAAACATCTCAGTTTGGGTAAGGACAAAGGAAAGAAACCAGTGAATGTTAACGGTAGTTTTTTGCATTCAATTAGAAAGGCTTGTTCTATCCTTCAGCGCCCGAGGTCTGTTCAGCCCCAACATAATGCTGAAGTAGATAGCCATTCCGAAATGAAAATGTCATCTTTGCCGTTAGGCACAGCTGCTGTTGTAGCTAATGGTGATAAAGGAGAATCATCCATAACAGATCTGTCTTCATCTAAAAAGGTACATGATTCTTGTAGCAGGCCTGATAGTCCTGCTAATCCCCTTGATATGCCATTAAGTCATCCTAATGATATTTTGGAACGCTTGGATCTTCCTCCTCACAAGGATTTGGAATCTTTGCTTCTGGATGCCATGAAGCCTGGTTTATTTTCAAAAAGTACTCCTGATCCATGCTCAGGCAAGCAAATGTCTCGGCAAGCAAGTTTGCCACCTTTCCCGTGGTCAAATACTTCTAGTTGGCATTGTAGAAGCAGTTCGGATACAGCAAAATTGTCTACAAGTAGGGGCTCATGTCAAGGTCGATGGCTAAAAATAGAGAGGAATACTGTTACTTCATTGGGAATTACCACTAGTAATTTTACTGACTTGGAGTCAATGACTTATGATCAGAGTCTAGTTCCTTCCGCAAGACTGAAAATGGCTTCCTCAACAGATAAAATTTCCCCAACCATATCTGTTCTACCTCAGTGTGAGTTGGATTCATCAGCTCCTGCAACATGTTTGAATGAAACATATGCTGTTTTAGACTCGGGAGGGAAGGTGAATCACTCAGGAAATAGTAATGATGAGCATAGTTCAAATATATTAGATGCTGCTCAAACACTTTGTGGCATGGCAACAAATCCCTTCATTCGAAATCCAGATGGAATCCTACGATGGTCAAAGAAGCCTTCACAAAAGGCCATGAAAGCTCGCAAGTTGAAAGCAGTTGAGAAACCTGATGATGTATATGGATCATCAATTGCAGTATCTGGGTCTGACAATCTCACAAGAAGAAGCATGGACCGGATGCTGATGCTGCCCCCAAAGAAGCCCAAGCTCTCTTTGAGTGATGATAGAAAGGATTACAATAACTTCAGTAGCGTTAGGAAAGAACCAATAAGTTGGTCTACACCAAGATCAAGTAGGTCATTACCTAGCAAATCAGGTAAAGAATCAATTGGGAGTATTAGACATTCGACTTCTGATGTGGCGAAGCATTCATATATGATGCCCCCTCCTTCAAAGGTTCCGGAGAAGGCTTCCCATAAGCGAGACAAGTTGAGGAATTTATTGACAATGGAATGGAGCAGGGGAAGAGACCGGCCAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

672

Amino Acids

73.71

Weight (kDa)

9.51

Isoelectric Point (pI)

50.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20670 AT1G76380 AT1G76380 AT1G76380
fragaria_vesca	FvH4_5g24560 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400
malus_domestica	MD06G1010000.v1.1 MD16G1284400.v1.1
prunus_persica	Prupe.5G010200_v2.0.a1
pyrus_communis	pycom06g00820 pycom16g25950
rosa_chinensis	RchiOBHm_Chr7g0215631
rosa_laevigata	RLG00000002637
rosa_multiflora	Rmu_sc0000898.1_g000040 Rmu_sc0007602.1_g000008
rosa_roxburghii	Rroxscaffold_3G00243980
rosa_rugosa	Rorug07G0155700 Rorug07G0155700
rosa_samantha	Rh7AG292100 Rh7BG284700 Rh7CG312100 Rh7DG295500
rosa_wichuraiana	Rw7G024880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	129
AatII	GACGTC	1 cut(s)	84
Acc36I	ACCTGC	1 cut(s)	536
AccB1I	GGYRCC	1 cut(s)	216
AccI	GTMKAC	2 cut(s)	1199, 1814
AccIII	TCCGGA	1 cut(s)	1936
AciI	CCGC	1 cut(s)	1329
AclWI	GGATC	3 cut(s)	1020, 1085, 1666
AcoI	YGGCCR	2 cut(s)	85, 2009
AcsI	RAATTY	3 cut(s)	467, 1362, 1972
AcuI	CTGAAG	4 cut(s)	544, 755, 828, 1765
AcyI	GRCGYC	1 cut(s)	81
AdeI	CACNNNGTG	1 cut(s)	1532
AfaI	GTAC	4 cut(s)	273, 597, 927, 1084
AfiI	CCNNNNNNNGG	1 cut(s)	1100
AflII	CTTAAG	1 cut(s)	605
AflIII	ACRYGT	1 cut(s)	1421
AgsI	TTSAA	9 cut(s)	14, 153, 266, 747, 1077, 1429, 1503, 1627, 1929
AhdI	GACNNNNNGTC	1 cut(s)	1294
AhlI	ACTAGT	1 cut(s)	1274
AjnI	CCWGG	3 cut(s)	212, 227, 1063
AjuI	GAANNNNNNNTTGG	2 cut(s)	533, 565
Alw26I	GTCTC	4 cut(s)	322, 1119, 1953, 1998
AlwI	GGATC	3 cut(s)	1020, 1085, 1666
AlwNI	CAGNNNCTG	3 cut(s)	863, 1415, 1676
Ama87I	CYCGRG	2 cut(s)	778, 1453
Aor13HI	TCCGGA	1 cut(s)	1936
AoxI	GGCC	5 cut(s)	85, 601, 944, 1605, 2009
ApeKI	GCWGC	6 cut(s)	111, 189, 569, 860, 1517, 1723
ApoI	RAATTY	3 cut(s)	467, 1362, 1972
Asp700I	GAANNNNTTC	2 cut(s)	584, 1177
AspLEI	GCGC	1 cut(s)	777
AspS9I	GGNCC	1 cut(s)	1708
AsuC2I	CCSGG	1 cut(s)	101
AsuHPI	GGTGA	4 cut(s)	212, 497, 890, 1477
AsuII	TTCGAA	1 cut(s)	1558
AvaI	CYCGRG	2 cut(s)	778, 1453
AvaII	GGWCC	1 cut(s)	1708
BanI	GGYRCC	1 cut(s)	216
BanII	GRGCYC	1 cut(s)	1214
BbsI	GAAGAC	2 cut(s)	210, 903
BbvI	GCAGC	6 cut(s)	123, 201, 556, 847, 1504, 1710
BccI	CCATC	6 cut(s)	170, 371, 662, 1221, 1562, 1575
BceAI	ACGGC	2 cut(s)	58, 832
BcgI	CGANNNNNNTGC	2 cut(s)	1097, 1131
BciT130I	CCWGG	3 cut(s)	214, 229, 1065
BciVI	GTATCC	1 cut(s)	1177
BclI	TGATCA	1 cut(s)	1309
BcnI	CCSGG	1 cut(s)	101
BcoDI	GTCTC	4 cut(s)	322, 1119, 1953, 1998
BcuI	ACTAGT	1 cut(s)	1274
BfaI	CTAG	5 cut(s)	347, 1158, 1275, 1319, 1842
BfmI	CTRYAG	2 cut(s)	432, 570
BfoI	RGCGCY	1 cut(s)	778
BfrI	CTTAAG	1 cut(s)	605
BfuAI	ACCTGC	1 cut(s)	536
BfuI	GTATCC	1 cut(s)	1177
BglII	AGATCT	1 cut(s)	904
BisI	GCNGC	6 cut(s)	112, 190, 570, 861, 1518, 1724
BlsI	GCNGC	6 cut(s)	113, 191, 571, 862, 1519, 1725
BmcAI	AGTACT	1 cut(s)	1084
Bme1390I	CCNGG	4 cut(s)	101, 214, 229, 1065
Bme18I	GGWCC	1 cut(s)	1708
BmeRI	GACNNNNNGTC	1 cut(s)	1294
BmeT110I	CYCGRG	2 cut(s)	778, 1453
BmgT120I	GGNCC	1 cut(s)	1708
BmiI	GGNNCC	3 cut(s)	72, 218, 1935
BmrFI	CCNGG	4 cut(s)	101, 214, 229, 1065
BmsI	GCATC	6 cut(s)	193, 1042, 1504, 1704, 1710, 1905
BpiI	GAAGAC	2 cut(s)	210, 903
BpmI	CTGGAG	3 cut(s)	69, 89, 390
Bpu10I	CCTNAGC	1 cut(s)	1099
Bpu14I	TTCGAA	1 cut(s)	1558
BpuMI	CCSGG	1 cut(s)	101
BsaHI	GRCGYC	1 cut(s)	81
BsaI	GGTCTC	2 cut(s)	322, 1998
BsaJI	CCNNGG	3 cut(s)	228, 779, 1142
BsaWI	WCCGGW	2 cut(s)	1710, 1936
BsaXI	ACNNNNNCTCC	4 cut(s)	42, 72, 1449, 1479
Bsc4I	CCNNNNNNNGG	1 cut(s)	1100
Bse118I	RCCGGY	2 cut(s)	87, 2007
Bse1I	ACTGG	2 cut(s)	373, 716
BseAI	TCCGGA	1 cut(s)	1936
BseBI	CCWGG	3 cut(s)	214, 229, 1065
BseDI	CCNNGG	3 cut(s)	228, 779, 1142
BseGI	GGATG	4 cut(s)	893, 985, 1057, 1719
BseLI	CCNNNNNNNGG	1 cut(s)	1100
BseMII	CTCAG	6 cut(s)	55, 352, 700, 1113, 1403, 1488
BseNI	ACTGG	2 cut(s)	373, 716
BseRI	GAGGAG	1 cut(s)	1011
BseX3I	CGGCCG	1 cut(s)	85
BseXI	GCAGC	6 cut(s)	123, 201, 556, 847, 1504, 1710
BsgI	GTGCAG	1 cut(s)	130
Bsh1285I	CGRYCG	1 cut(s)	88
BshFI	GGCC	5 cut(s)	87, 603, 946, 1607, 2011
BshNI	GGYRCC	1 cut(s)	216
BsiEI	CGRYCG	1 cut(s)	88
BsiHKCI	CYCGRG	2 cut(s)	778, 1453
BsiSI	CCGG	5 cut(s)	88, 101, 1711, 1937, 2008
BslI	CCNNNNNNNGG	1 cut(s)	1100
BsmAI	GTCTC	4 cut(s)	322, 1119, 1953, 1998
BsmI	GAATGC	2 cut(s)	742, 1903
BsnI	GGCC	5 cut(s)	87, 603, 946, 1607, 2011
Bso31I	GGTCTC	2 cut(s)	322, 1998
BsoBI	CYCGRG	2 cut(s)	778, 1453
Bsp119I	TTCGAA	1 cut(s)	1558
Bsp1286I	GDGCHC	1 cut(s)	1214
Bsp13I	TCCGGA	1 cut(s)	1936
Bsp1407I	TGTACA	1 cut(s)	271
Bsp143I	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
BspACI	CCGC	1 cut(s)	1329
BspANI	GGCC	5 cut(s)	87, 603, 946, 1607, 2011
BspCNI	CTCAG	6 cut(s)	54, 351, 699, 1112, 1402, 1487
BspEI	TCCGGA	1 cut(s)	1936
BspHI	TCATGA	1 cut(s)	619
BspLI	GGNNCC	3 cut(s)	72, 218, 1935
BspMAI	CTGCAG	2 cut(s)	436, 574
BspMI	ACCTGC	1 cut(s)	536
BspPI	GGATC	3 cut(s)	1020, 1085, 1666
BspT104I	TTCGAA	1 cut(s)	1558
BspT107I	GGYRCC	1 cut(s)	216
BspTI	CTTAAG	1 cut(s)	605
BspTNI	GGTCTC	2 cut(s)	322, 1998
BsrFI	RCCGGY	2 cut(s)	87, 2007
BsrGI	TGTACA	1 cut(s)	271
BsrI	ACTGG	2 cut(s)	373, 716
BssAI	RCCGGY	2 cut(s)	87, 2007
BssECI	CCNNGG	3 cut(s)	228, 779, 1142
BssMI	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
BssNI	GRCGYC	1 cut(s)	81
Bst2UI	CCWGG	3 cut(s)	214, 229, 1065
Bst4CI	ACNGT	3 cut(s)	58, 731, 1252
Bst6I	CTCTTC	1 cut(s)	1996
BstACI	GRCGYC	1 cut(s)	81
BstAFI	CTTAAG	1 cut(s)	605
BstAUI	TGTACA	1 cut(s)	271
BstBI	TTCGAA	1 cut(s)	1558
BstC8I	GCNNGC	7 cut(s)	89, 479, 556, 944, 1106, 1122, 1618
BstDEI	CTNAG	7 cut(s)	41, 168, 338, 686, 1099, 1389, 1474
BstDSI	CCRYGG	1 cut(s)	1142
BstF5I	GGATG	4 cut(s)	893, 985, 1057, 1719
BstH2I	RGCGCY	1 cut(s)	778
BstHHI	GCGC	1 cut(s)	777
BstKTI	GATC	7 cut(s)	646, 907, 1015, 1093, 1312, 1661, 1826
BstMAI	GTCTC	4 cut(s)	322, 1119, 1953, 1998
BstMBI	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
BstMCI	CGRYCG	1 cut(s)	88
BstMWI	GCNNNNNNNGC	5 cut(s)	400, 551, 869, 1613, 1723
BstNI	CCWGG	3 cut(s)	214, 229, 1065
BstNSI	RCATGY	3 cut(s)	394, 638, 1425
BstSCI	CCNGG	4 cut(s)	99, 212, 227, 1063
BstSFI	CTRYAG	2 cut(s)	432, 570
BstV1I	GCAGC	6 cut(s)	123, 201, 556, 847, 1504, 1710
BstV2I	GAAGAC	2 cut(s)	210, 903
BstX2I	RGATCY	2 cut(s)	904, 1012
BstXI	CCANNNNNNTGG	1 cut(s)	1809
BstYI	RGATCY	2 cut(s)	904, 1012
BstZI	CGGCCG	1 cut(s)	85
BsuI	GTATCC	1 cut(s)	1177
BsuRI	GGCC	5 cut(s)	87, 603, 946, 1607, 2011
BtgI	CCRYGG	1 cut(s)	1142
BtgZI	GCGATG	1 cut(s)	170
BtsCI	GGATG	4 cut(s)	893, 985, 1057, 1719
BtsIMutI	CAGTG	4 cut(s)	297, 650, 723, 1397
BveI	ACCTGC	1 cut(s)	536
Cac8I	GCNNGC	7 cut(s)	89, 479, 556, 944, 1106, 1122, 1618
CaiI	CAGNNNCTG	3 cut(s)	863, 1415, 1676
CciI	TCATGA	1 cut(s)	619
CfoI	GCGC	1 cut(s)	777
Cfr10I	RCCGGY	2 cut(s)	87, 2007
Cfr13I	GGNCC	1 cut(s)	1708
Csp6I	GTAC	4 cut(s)	272, 596, 926, 1083
CviQI	GTAC	4 cut(s)	272, 596, 926, 1083
DdeI	CTNAG	7 cut(s)	41, 168, 338, 686, 1099, 1389, 1474
DpnI	GATC	7 cut(s)	645, 906, 1014, 1092, 1311, 1660, 1825
DpnII	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
DraIII	CACNNNGTG	1 cut(s)	1532
DriI	GACNNNNNGTC	1 cut(s)	1294
EaeI	YGGCCR	2 cut(s)	85, 2009
EagI	CGGCCG	1 cut(s)	85
Eam1104I	CTCTTC	1 cut(s)	1996
Eam1105I	GACNNNNNGTC	1 cut(s)	1294
EarI	CTCTTC	1 cut(s)	1996
EclXI	CGGCCG	1 cut(s)	85
Eco147I	AGGCCT	1 cut(s)	946
Eco24I	GRGCYC	1 cut(s)	1214
Eco31I	GGTCTC	2 cut(s)	322, 1998
Eco47I	GGWCC	1 cut(s)	1708
Eco52I	CGGCCG	1 cut(s)	85
Eco57I	CTGAAG	4 cut(s)	544, 755, 828, 1765
Eco88I	CYCGRG	2 cut(s)	778, 1453
EcoRII	CCWGG	3 cut(s)	212, 227, 1063
EcoT38I	GRGCYC	1 cut(s)	1214
FauNDI	CATATG	1 cut(s)	1438
FbaI	TGATCA	1 cut(s)	1309
FblI	GTMKAC	2 cut(s)	1199, 1814
Fnu4HI	GCNGC	6 cut(s)	112, 190, 570, 861, 1518, 1724
FokI	GGATG	4 cut(s)	880, 972, 1064, 1726
FriOI	GRGCYC	1 cut(s)	1214
Fsp4HI	GCNGC	6 cut(s)	112, 190, 570, 861, 1518, 1724
FspBI	CTAG	5 cut(s)	347, 1158, 1275, 1319, 1842
GlaI	GCGC	1 cut(s)	776
GluI	GCNGC	6 cut(s)	112, 190, 570, 861, 1518, 1724
GsuI	CTGGAG	3 cut(s)	69, 89, 390
HaeII	RGCGCY	1 cut(s)	778
HaeIII	GGCC	5 cut(s)	87, 603, 946, 1607, 2011
HapII	CCGG	5 cut(s)	88, 101, 1711, 1937, 2008
HhaI	GCGC	1 cut(s)	777
Hin1I	GRCGYC	1 cut(s)	81
Hin6I	GCGC	1 cut(s)	775
HinP1I	GCGC	1 cut(s)	775
HincII	GTYRAC	2 cut(s)	344, 727
HindII	GTYRAC	2 cut(s)	344, 727
HindIII	AAGCTT	2 cut(s)	170, 556
HpaI	GTTAAC	1 cut(s)	727
HpaII	CCGG	5 cut(s)	88, 101, 1711, 1937, 2008
HphI	GGTGA	4 cut(s)	212, 497, 890, 1477
Hpy166II	GTNNAC	5 cut(s)	272, 344, 727, 1200, 1815
Hpy188I	TCNGA	9 cut(s)	44, 160, 358, 613, 826, 1183, 1314, 1684, 1891
Hpy188III	TCNNGA	9 cut(s)	120, 620, 665, 1049, 1088, 1455, 1476, 1565, 1937
Hpy8I	GTNNAC	5 cut(s)	272, 344, 727, 1200, 1815
Hpy99I	CGWCG	1 cut(s)	86
HpyCH4III	ACNGT	3 cut(s)	58, 731, 1252
HpyCH4IV	ACGT	1 cut(s)	81
HpyCH4V	TGCA	8 cut(s)	111, 419, 426, 434, 572, 742, 1418, 1670
HpyF10VI	GCNNNNNNNGC	5 cut(s)	400, 551, 869, 1613, 1723
HpyF3I	CTNAG	7 cut(s)	41, 168, 338, 686, 1099, 1389, 1474
HpySE526I	ACGT	1 cut(s)	81
Hsp92I	GRCGYC	1 cut(s)	81
HspAI	GCGC	1 cut(s)	775
Kpn2I	TCCGGA	1 cut(s)	1936
KroI	GCCGGC	1 cut(s)	87
KroNI	GCCGGC	1 cut(s)	89
Ksp22I	TGATCA	1 cut(s)	1309
KspAI	GTTAAC	1 cut(s)	727
Kzo9I	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
LmnI	GCTCC	5 cut(s)	64, 70, 103, 1417, 1992
Lsp1109I	GCAGC	6 cut(s)	123, 201, 556, 847, 1504, 1710
LweI	GCATC	6 cut(s)	193, 1042, 1504, 1704, 1710, 1905
MaeI	CTAG	5 cut(s)	347, 1158, 1275, 1319, 1842
MaeII	ACGT	1 cut(s)	81
MaeIII	GTNAC	5 cut(s)	52, 77, 136, 625, 1252
MalI	GATC	7 cut(s)	645, 906, 1014, 1092, 1311, 1660, 1825
MboI	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
MboII	GAAGA	7 cut(s)	141, 215, 362, 903, 1007, 1710, 2013
MfeI	CAATTG	4 cut(s)	141, 446, 1665, 1863
MflI	RGATCY	2 cut(s)	904, 1012
MhlI	GDGCHC	1 cut(s)	1214
MlyI	GAGTC	5 cut(s)	330, 436, 1304, 1324, 1445
MmeI	TCCRAC	1 cut(s)	1380
MroI	TCCGGA	1 cut(s)	1936
MroNI	GCCGGC	1 cut(s)	87
MroXI	GAANNNNTTC	2 cut(s)	584, 1177
MseI	TTAA	6 cut(s)	251, 324, 365, 606, 726, 980
MslI	CAYNNNNRTG	3 cut(s)	222, 639, 990
MspA1I	CMGCKG	1 cut(s)	860
MspCI	CTTAAG	1 cut(s)	605
MspI	CCGG	5 cut(s)	88, 101, 1711, 1937, 2008
MspR9I	CCNGG	4 cut(s)	101, 214, 229, 1065
MunI	CAATTG	4 cut(s)	141, 446, 1665, 1863
Mva1269I	GAATGC	2 cut(s)	742, 1903
MvaI	CCWGG	3 cut(s)	214, 229, 1065
MwoI	GCNNNNNNNGC	5 cut(s)	400, 551, 869, 1613, 1723
NaeI	GCCGGC	1 cut(s)	89
NciI	CCSGG	1 cut(s)	101
NdeI	CATATG	1 cut(s)	1438
NdeII	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
NgoMIV	GCCGGC	1 cut(s)	87
NlaIV	GGNNCC	3 cut(s)	72, 218, 1935
NmeAIII	GCCGAG	2 cut(s)	384, 1096
NmuCI	GTSAC	2 cut(s)	77, 625
NspI	RCATGY	3 cut(s)	394, 638, 1425
NspV	TTCGAA	1 cut(s)	1558
PagI	TCATGA	1 cut(s)	619
PceI	AGGCCT	1 cut(s)	946
PciI	ACATGT	1 cut(s)	1421
PctI	GAATGC	2 cut(s)	742, 1903
PdiI	GCCGGC	1 cut(s)	89
PdmI	GAANNNNTTC	2 cut(s)	584, 1177
PflFI	GACNNNGTC	1 cut(s)	339
PkrI	GCNGC	6 cut(s)	113, 191, 571, 862, 1519, 1725
PleI	GAGTC	5 cut(s)	330, 436, 1303, 1323, 1445
PpsI	GAGTC	5 cut(s)	330, 436, 1303, 1323, 1445
PscI	ACATGT	1 cut(s)	1421
PsiI	TTATAA	1 cut(s)	129
Psp6I	CCWGG	3 cut(s)	212, 227, 1063
PspGI	CCWGG	3 cut(s)	212, 227, 1063
PspN4I	GGNNCC	3 cut(s)	72, 218, 1935
PspPI	GGNCC	1 cut(s)	1708
PsrI	GAACNNNNNNTAC	2 cut(s)	1162, 1194
PstI	CTGCAG	2 cut(s)	436, 574
PstNI	CAGNNNCTG	3 cut(s)	863, 1415, 1676
PsuI	RGATCY	2 cut(s)	904, 1012
PsyI	GACNNNGTC	1 cut(s)	339
PvuII	CAGCTG	1 cut(s)	860
RsaI	GTAC	4 cut(s)	273, 597, 927, 1084
RsaNI	GTAC	4 cut(s)	272, 596, 926, 1083
RseI	CAYNNNNRTG	3 cut(s)	222, 639, 990
SaqAI	TTAA	6 cut(s)	251, 324, 365, 606, 726, 980
SatI	GCNGC	6 cut(s)	112, 190, 570, 861, 1518, 1724
Sau3AI	GATC	7 cut(s)	643, 904, 1012, 1090, 1309, 1658, 1823
Sau96I	GGNCC	1 cut(s)	1708
ScaI	AGTACT	1 cut(s)	1084
SchI	GAGTC	5 cut(s)	330, 436, 1304, 1324, 1445
ScrFI	CCNGG	4 cut(s)	101, 214, 229, 1065
SduI	GDGCHC	1 cut(s)	1214
SfaNI	GCATC	6 cut(s)	193, 1042, 1504, 1704, 1710, 1905
SfcI	CTRYAG	2 cut(s)	432, 570
SfuI	TTCGAA	1 cut(s)	1558
SinI	GGWCC	1 cut(s)	1708
SmiMI	CAYNNNNRTG	3 cut(s)	222, 639, 990
SmlI	CTYRAG	1 cut(s)	605
SmoI	CTYRAG	1 cut(s)	605
SpeI	ACTAGT	1 cut(s)	1274
SseBI	AGGCCT	1 cut(s)	946
SsiI	CCGC	1 cut(s)	1329
SspMI	CTAG	5 cut(s)	347, 1158, 1275, 1319, 1842
StuI	AGGCCT	1 cut(s)	946
StyD4I	CCNGG	4 cut(s)	99, 212, 227, 1063
TaaI	ACNGT	3 cut(s)	58, 731, 1252
TaiI	ACGT	1 cut(s)	84
TaqI	TCGA	5 cut(s)	121, 302, 1225, 1558, 1883
TatI	WGTACW	3 cut(s)	271, 595, 1082
Tru1I	TTAA	6 cut(s)	251, 324, 365, 606, 726, 980
Tru9I	TTAA	6 cut(s)	251, 324, 365, 606, 726, 980
TscAI	CASTG	4 cut(s)	297, 657, 723, 1397
TseFI	GTSAC	2 cut(s)	77, 625
TseI	GCWGC	6 cut(s)	111, 189, 569, 860, 1517, 1723
Tsp45I	GTSAC	2 cut(s)	77, 625
TspGWI	ACGGA	1 cut(s)	298
TspRI	CASTG	4 cut(s)	297, 657, 723, 1397
Tth111I	GACNNNGTC	1 cut(s)	339
Vha464I	CTTAAG	1 cut(s)	605
VpaK11BI	GGWCC	1 cut(s)	1708
XapI	RAATTY	3 cut(s)	467, 1362, 1972
XceI	RCATGY	3 cut(s)	394, 638, 1425
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1140
XmiI	GTMKAC	2 cut(s)	1199, 1814
XmnI	GAANNNNTTC	2 cut(s)	584, 1177
XspI	CTAG	5 cut(s)	347, 1158, 1275, 1319, 1842
ZraI	GACGTC	1 cut(s)	82
ZrmI	AGTACT	1 cut(s)	1084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.