Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0005754

Physical Location & Seq

Genomic Coordinates Reverse (-)

28192674 .. 28196507

Gene Structure 3834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g25950.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGAGATTTTTGAAATGTGGAGGCATCAGAAAACAGAAACACCGGCCGATGACGACGATGAATAATCCTCCAACCAAAAAGAAGAAAGGTCGTCCTTCTCTCCTGGATCTCCAGAAGCGCGCCCTCCTCCAACAACAGGAGCAGGACCAATGCCGAAACCCTCGCCGTCTATCCACACGCCGGAACCCTACTCCTCTCGATTCATCCCCGCCGTCCAATTCCCTTGCCGAAGCCGATGACGACGATGAGCGCGCAAAGAAGAAGCATAAGCCCCTCCTCGGTTTTAATCCCAATTCGACTCCGACATTGTCGCCCTTTAATTCGGGCGCCTACGGTTCCGATTCGAACGCGGGTGGTGAGGATCCGGAGGCCGCTCTCAAGATCAGCACCGTCCATCGCGGATCTAATCATATGAGCCGTGAAGAGATTTTGAAAGCGACAGACAGTAGCAGTTTATTACATGGGTCGCAGGTGGAGTCCGGTCCCACGACACCTTTGCCAGACAAAAAGTTGCTGGTGTTCATCCTTGATAGGCTTCAAAAAAGGGACACTCGCGGGGTGTTCTCTGAGCCCGTTGATCCAGAAGAGCTTCCTGATTATCAGGAAATCATTCAAAACCCAATGGATTTTGGAACTGTGAGGACGAAACTAGATCATGGAGCTTACTCCAACTTGGAACAGTTTGAGAAAGATGTGTTCTTGATATGTTCAAATGCAATGGAGTATAATGCACCAGACACTATTTACTTTCGACAGGCACGATCGATCCAAGAGCTCGCAAAAAAGGACTTTGAAAATTTGAGGCAAGTAAACGAAGACGGTGATCCAAAACCAAAAATTGCGAGGAGAGGCAGGCCACCTGGCAAGAGCATGAAAAAGTCAATTGAAGGCTCTCCACTTGATCGTGTAGGTCCTCAATTTGTATCAGAAACTACTCTTGCTTCTGGAGGAGAGAATCCTAGCTTGTCCGGCACATACAATCTAAGACGGCCTGCTCCCCATAAGTTCAGGTCTTCTGATGCATTAAATATGGGCCCCCATGGGTCTCTTAGTGGTGAAACTGGTGCTAGTTGGTTGCCTGGCTGGGAGAATGAATTTCCAGCTTCTGTATTGAGGAGTGATCTAAAATATGGAAAGAAACATTTTACAGTAGATGAGAACAGACGCGACACTTATACACAAGCTCTGGCTTTTGGCGATGAGCCATCAATGTTTTCTGGTTGTGAAGGAGAGTGGAAGCAACTTGTGGCGGTAGGTCTACAATTTGAGCATGGTTATGCAAGGAGTCTAGCTCGTTTTGCCGCAAATCTTGGACCTGTTGCTTGGAAGGTTGCTTCAAAGAAAATTGCAAGTGTTTTGCCTGTTGGAATCAAGTTTGGTCCAGGATGGATAGGAGAAAATGAGACATGGAGGATGCAACCGTTTTCAGTCCGTGAGAGGGAACAGAGGGTTCAAGGCAACCCTGCATCTGATGACCACACAGACAAACTTGTACCCCAGAGTACATTATGCTCAGACGAAGCCAGATTGTCAGAAATTTCAAGTGGACCGAGATCTAGCCACGTGCTTGGTGGGGAAGCATCGTGGAATGGTTCATCCTTGCACAATAAACATGTTGCTTACACATTCCCCTCGGACTTGAACGTCAAACTGGGTGCCGCAGGCTTACCTCAAATGGGTCTGCAACAACAACAGCAAATGCAGCCGGATTTAGCTTTGCAGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

576

Amino Acids

63.7

Weight (kDa)

8.83

Isoelectric Point (pI)

47.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20670 AT1G76380 AT1G76380 AT1G76380
fragaria_vesca	FvH4_5g24560 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400
malus_domestica	MD06G1010000.v1.1 MD16G1284400.v1.1
prunus_persica	Prupe.5G010200_v2.0.a1
pyrus_communis	pycom06g00820 pycom16g25950
rosa_chinensis	RchiOBHm_Chr7g0215631
rosa_laevigata	RLG00000002637
rosa_multiflora	Rmu_sc0000898.1_g000040 Rmu_sc0007602.1_g000008
rosa_roxburghii	Rroxscaffold_3G00243980
rosa_rugosa	Rorug07G0155700 Rorug07G0155700
rosa_samantha	Rh7AG292100 Rh7BG284700 Rh7CG312100 Rh7DG295500
rosa_wichuraiana	Rw7G024880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	460
AasI	GACNNNNNNGTC	1 cut(s)	1643
Acc36I	ACCTGC	1 cut(s)	460
AccB1I	GGYRCC	2 cut(s)	326, 1655
AccBSI	CCGCTC	1 cut(s)	374
AccI	GTMKAC	1 cut(s)	1258
AccII	CGCG	6 cut(s)	120, 252, 350, 399, 555, 1167
AccIII	TCCGGA	1 cut(s)	364
AciI	CCGC	8 cut(s)	209, 350, 372, 399, 555, 1250, 1302, 1659
AclWI	GGATC	7 cut(s)	114, 356, 369, 409, 572, 760, 818
AcoI	YGGCCR	1 cut(s)	44
AcsI	RAATTY	3 cut(s)	796, 1094, 1536
AcvI	CACGTG	1 cut(s)	1564
AcyI	GRCGYC	1 cut(s)	327
AfaI	GTAC	2 cut(s)	1494, 1504
AfiI	CCNNNNNNNGG	5 cut(s)	136, 180, 278, 1438, 1676
AflIII	ACRYGT	1 cut(s)	1612
AjnI	CCWGG	4 cut(s)	102, 859, 1078, 1381
AluBI	AGCT	9 cut(s)	589, 662, 775, 963, 1103, 1184, 1292, 1715, 1723
AluI	AGCT	9 cut(s)	589, 662, 775, 963, 1103, 1184, 1292, 1715, 1723
Alw21I	GWGCWC	1 cut(s)	777
Alw26I	GTCTC	2 cut(s)	1050, 1397
AlwI	GGATC	7 cut(s)	114, 356, 369, 409, 572, 760, 818
AlwNI	CAGNNNCTG	1 cut(s)	1106
Aor13HI	TCCGGA	1 cut(s)	364
AoxI	GGCC	5 cut(s)	44, 369, 854, 989, 1033
ApaI	GGGCCC	1 cut(s)	1037
ApeKI	GCWGC	2 cut(s)	1702, 1720
ApoI	RAATTY	3 cut(s)	796, 1094, 1536
Asp700I	GAANNNNTTC	2 cut(s)	588, 609
AspLEI	GCGC	5 cut(s)	120, 122, 252, 254, 329
AspS9I	GGNCC	8 cut(s)	145, 482, 911, 1033, 1034, 1313, 1379, 1547
AsuHPI	GGTGA	3 cut(s)	368, 833, 1067
AsuII	TTCGAA	1 cut(s)	344
AvaII	GGWCC	6 cut(s)	145, 482, 911, 1313, 1379, 1547
BaeGI	GKGCMC	1 cut(s)	1037
BamHI	GGATCC	1 cut(s)	361
BanI	GGYRCC	2 cut(s)	326, 1655
BanII	GRGCYC	3 cut(s)	573, 777, 1037
BbrPI	CACGTG	1 cut(s)	1564
BbsI	GAAGAC	2 cut(s)	822, 1005
Bbv12I	GWGCWC	1 cut(s)	777
BbvI	GCAGC	1 cut(s)	1714
BccI	CCATC	3 cut(s)	402, 1213, 1380
BceAI	ACGGC	4 cut(s)	150, 196, 402, 1004
BcgI	CGANNNNNNTGC	2 cut(s)	478, 512
BciT130I	CCWGG	4 cut(s)	104, 861, 1080, 1383
BcoDI	GTCTC	2 cut(s)	1050, 1397
BfaI	CTAG	5 cut(s)	650, 960, 1068, 1289, 1557
BfoI	RGCGCY	1 cut(s)	330
BfuAI	ACCTGC	1 cut(s)	460
BglII	AGATCT	1 cut(s)	1553
BisI	GCNGC	5 cut(s)	372, 1302, 1659, 1703, 1721
BlsI	GCNGC	5 cut(s)	373, 1303, 1660, 1704, 1722
Bme1390I	CCNGG	4 cut(s)	104, 861, 1080, 1383
Bme18I	GGWCC	6 cut(s)	145, 482, 911, 1313, 1379, 1547
BmgT120I	GGNCC	8 cut(s)	145, 482, 911, 1033, 1034, 1313, 1379, 1547
BmiI	GGNNCC	8 cut(s)	185, 328, 337, 363, 484, 1035, 1036, 1657
BmrFI	CCNGG	4 cut(s)	104, 861, 1080, 1383
BmrI	ACTGGG	1 cut(s)	1661
BmsI	GCATC	5 cut(s)	33, 1009, 1404, 1475, 1589
BmuI	ACTGGG	1 cut(s)	1661
BpiI	GAAGAC	2 cut(s)	822, 1005
BplI	GAGNNNNNCTC	2 cut(s)	1276, 1308
BpmI	CTGGAG	2 cut(s)	95, 966
Bpu14I	TTCGAA	1 cut(s)	344
BpuEI	CTTGAG	1 cut(s)	362
Bsa29I	ATCGAT	1 cut(s)	764
BsaAI	YACGTR	1 cut(s)	1564
BsaHI	GRCGYC	1 cut(s)	327
BsaI	GGTCTC	1 cut(s)	1050
BsaJI	CCNNGG	3 cut(s)	277, 1039, 1632
BsaWI	WCCGGW	2 cut(s)	364, 479
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 180, 278, 1438, 1676
Bse118I	RCCGGY	1 cut(s)	42
Bse1I	ACTGG	2 cut(s)	1066, 1656
Bse3DI	GCAATG	1 cut(s)	723
BseAI	TCCGGA	1 cut(s)	364
BseBI	CCWGG	4 cut(s)	104, 861, 1080, 1383
BseCI	ATCGAT	1 cut(s)	764
BseDI	CCNNGG	3 cut(s)	277, 1039, 1632
BseGI	GGATG	5 cut(s)	203, 522, 1391, 1419, 1595
BseLI	CCNNNNNNNGG	5 cut(s)	136, 180, 278, 1438, 1676
BseMI	GCAATG	1 cut(s)	723
BseMII	CTCAG	2 cut(s)	558, 1527
BseNI	ACTGG	2 cut(s)	1066, 1656
BsePI	GCGCGC	2 cut(s)	118, 250
BseRI	GAGGAG	6 cut(s)	116, 183, 266, 859, 963, 1129
BseSI	GKGCMC	1 cut(s)	1037
BseX3I	CGGCCG	1 cut(s)	44
BseXI	GCAGC	1 cut(s)	1714
BseYI	CCCAGC	1 cut(s)	1083
Bsh1236I	CGCG	6 cut(s)	120, 252, 350, 399, 555, 1167
Bsh1285I	CGRYCG	2 cut(s)	47, 764
BshFI	GGCC	5 cut(s)	46, 371, 856, 991, 1035
BshNI	GGYRCC	2 cut(s)	326, 1655
BshVI	ATCGAT	1 cut(s)	764
BsiEI	CGRYCG	2 cut(s)	47, 764
BsiHKAI	GWGCWC	1 cut(s)	777
BsiSI	CCGG	6 cut(s)	43, 181, 365, 480, 969, 1706
BslFI	GGGAC	2 cut(s)	468, 560
BslI	CCNNNNNNNGG	5 cut(s)	136, 180, 278, 1438, 1676
BsmAI	GTCTC	2 cut(s)	1050, 1397
BsmFI	GGGAC	2 cut(s)	468, 560
BsnI	GGCC	5 cut(s)	46, 371, 856, 991, 1035
Bso31I	GGTCTC	1 cut(s)	1050
Bsp119I	TTCGAA	1 cut(s)	344
Bsp120I	GGGCCC	1 cut(s)	1033
Bsp1286I	GDGCHC	3 cut(s)	573, 777, 1037
Bsp13I	TCCGGA	1 cut(s)	364
Bsp19I	CCATGG	1 cut(s)	1039
BspACI	CCGC	8 cut(s)	209, 350, 372, 399, 555, 1250, 1302, 1659
BspANI	GGCC	5 cut(s)	46, 371, 856, 991, 1035
BspCNI	CTCAG	2 cut(s)	559, 1526
BspDI	ATCGAT	1 cut(s)	764
BspEI	TCCGGA	1 cut(s)	364
BspFNI	CGCG	6 cut(s)	120, 252, 350, 399, 555, 1167
BspLI	GGNNCC	8 cut(s)	185, 328, 337, 363, 484, 1035, 1036, 1657
BspMI	ACCTGC	1 cut(s)	460
BspPI	GGATC	7 cut(s)	114, 356, 369, 409, 572, 760, 818
BspQI	GCTCTTC	1 cut(s)	579
BspT104I	TTCGAA	1 cut(s)	344
BspT107I	GGYRCC	2 cut(s)	326, 1655
BspTNI	GGTCTC	1 cut(s)	1050
BsrBI	CCGCTC	1 cut(s)	374
BsrDI	GCAATG	1 cut(s)	723
BsrFI	RCCGGY	1 cut(s)	42
BsrI	ACTGG	2 cut(s)	1066, 1656
BssAI	RCCGGY	1 cut(s)	42
BssECI	CCNNGG	3 cut(s)	277, 1039, 1632
BssHII	GCGCGC	2 cut(s)	118, 250
BssNI	GRCGYC	1 cut(s)	327
BssT1I	CCWWGG	1 cut(s)	1039
Bst2UI	CCWGG	4 cut(s)	104, 861, 1080, 1383
Bst4CI	ACNGT	8 cut(s)	335, 391, 446, 637, 681, 821, 1150, 1422
Bst6I	CTCTTC	2 cut(s)	417, 579
BstACI	GRCGYC	1 cut(s)	327
BstBAI	YACGTR	1 cut(s)	1564
BstBI	TTCGAA	1 cut(s)	344
BstC8I	GCNNGC	6 cut(s)	120, 252, 777, 854, 993, 1663
BstDEI	CTNAG	4 cut(s)	567, 983, 1049, 1513
BstDSI	CCRYGG	1 cut(s)	1039
BstF5I	GGATG	5 cut(s)	203, 522, 1391, 1419, 1595
BstFNI	CGCG	6 cut(s)	120, 252, 350, 399, 555, 1167
BstH2I	RGCGCY	1 cut(s)	330
BstHHI	GCGC	5 cut(s)	120, 122, 252, 254, 329
BstMAI	GTCTC	2 cut(s)	1050, 1397
BstMCI	CGRYCG	2 cut(s)	47, 764
BstMWI	GCNNNNNNNGC	3 cut(s)	969, 1298, 1702
BstNI	CCWGG	4 cut(s)	104, 861, 1080, 1383
BstNSI	RCATGY	1 cut(s)	1616
BstSCI	CCNGG	4 cut(s)	102, 859, 1078, 1381
BstSLI	GKGCMC	1 cut(s)	1037
BstUI	CGCG	6 cut(s)	120, 252, 350, 399, 555, 1167
BstV1I	GCAGC	1 cut(s)	1714
BstV2I	GAAGAC	2 cut(s)	822, 1005
BstX2I	RGATCY	4 cut(s)	106, 361, 401, 1553
BstXI	CCANNNNNNTGG	1 cut(s)	1568
BstYI	RGATCY	4 cut(s)	106, 361, 401, 1553
BstZI	CGGCCG	1 cut(s)	44
Bsu15I	ATCGAT	1 cut(s)	764
BsuRI	GGCC	5 cut(s)	46, 371, 856, 991, 1035
BsuTUI	ATCGAT	1 cut(s)	764
BtgI	CCRYGG	1 cut(s)	1039
BtgZI	GCGATG	2 cut(s)	380, 1212
BtsCI	GGATG	5 cut(s)	203, 522, 1391, 1419, 1595
BveI	ACCTGC	1 cut(s)	460
Cac8I	GCNNGC	6 cut(s)	120, 252, 777, 854, 993, 1663
CaiI	CAGNNNCTG	1 cut(s)	1106
CfoI	GCGC	5 cut(s)	120, 122, 252, 254, 329
Cfr10I	RCCGGY	1 cut(s)	42
Cfr13I	GGNCC	8 cut(s)	145, 482, 911, 1033, 1034, 1313, 1379, 1547
ClaI	ATCGAT	1 cut(s)	764
CseI	GACGC	1 cut(s)	1173
Csp6I	GTAC	2 cut(s)	1493, 1503
CviAII	CATG	7 cut(s)	461, 656, 871, 1040, 1271, 1407, 1613
CviQI	GTAC	2 cut(s)	1493, 1503
DdeI	CTNAG	4 cut(s)	567, 983, 1049, 1513
DinI	GGCGCC	1 cut(s)	328
DrdI	GACNNNNNNGTC	1 cut(s)	1643
DseDI	GACNNNNNNGTC	1 cut(s)	1643
EaeI	YGGCCR	1 cut(s)	44
EagI	CGGCCG	1 cut(s)	44
Eam1104I	CTCTTC	2 cut(s)	417, 579
EarI	CTCTTC	2 cut(s)	417, 579
Ecl136II	GAGCTC	1 cut(s)	775
EclXI	CGGCCG	1 cut(s)	44
Eco130I	CCWWGG	1 cut(s)	1039
Eco24I	GRGCYC	3 cut(s)	573, 777, 1037
Eco31I	GGTCTC	1 cut(s)	1050
Eco47I	GGWCC	6 cut(s)	145, 482, 911, 1313, 1379, 1547
Eco52I	CGGCCG	1 cut(s)	44
Eco53kI	GAGCTC	1 cut(s)	775
Eco72I	CACGTG	1 cut(s)	1564
EcoICRI	GAGCTC	1 cut(s)	775
EcoO109I	RGGNCCY	2 cut(s)	911, 1034
EcoRII	CCWGG	4 cut(s)	102, 859, 1078, 1381
EcoT14I	CCWWGG	1 cut(s)	1039
EcoT22I	ATGCAT	1 cut(s)	1024
EcoT38I	GRGCYC	3 cut(s)	573, 777, 1037
EgeI	GGCGCC	1 cut(s)	328
EheI	GGCGCC	1 cut(s)	328
ErhI	CCWWGG	1 cut(s)	1039
FaeI	CATG	7 cut(s)	464, 659, 874, 1043, 1274, 1410, 1616
FaqI	GGGAC	2 cut(s)	468, 560
FatI	CATG	7 cut(s)	460, 655, 870, 1039, 1270, 1406, 1612
FauI	CCCGC	3 cut(s)	216, 343, 548
FauNDI	CATATG	1 cut(s)	411
FblI	GTMKAC	1 cut(s)	1258
Fnu4HI	GCNGC	5 cut(s)	372, 1302, 1659, 1703, 1721
FokI	GGATG	5 cut(s)	190, 509, 1398, 1426, 1582
FriOI	GRGCYC	3 cut(s)	573, 777, 1037
Fsp4HI	GCNGC	5 cut(s)	372, 1302, 1659, 1703, 1721
FspBI	CTAG	5 cut(s)	650, 960, 1068, 1289, 1557
GlaI	GCGC	5 cut(s)	119, 121, 251, 253, 328
GluI	GCNGC	5 cut(s)	372, 1302, 1659, 1703, 1721
GsaI	CCCAGC	1 cut(s)	1087
GsuI	CTGGAG	2 cut(s)	95, 966
HaeII	RGCGCY	1 cut(s)	330
HaeIII	GGCC	5 cut(s)	46, 371, 856, 991, 1035
HapII	CCGG	6 cut(s)	43, 181, 365, 480, 969, 1706
HgaI	GACGC	1 cut(s)	1173
HhaI	GCGC	5 cut(s)	120, 122, 252, 254, 329
Hin1I	GRCGYC	1 cut(s)	327
Hin1II	CATG	7 cut(s)	464, 659, 874, 1043, 1274, 1410, 1616
Hin6I	GCGC	5 cut(s)	118, 120, 250, 252, 327
HinP1I	GCGC	5 cut(s)	118, 120, 250, 252, 327
HinfI	GANTC	7 cut(s)	200, 298, 341, 476, 955, 1285, 1368
HpaII	CCGG	6 cut(s)	43, 181, 365, 480, 969, 1706
HphI	GGTGA	3 cut(s)	368, 833, 1067
Hpy166II	GTNNAC	3 cut(s)	811, 1259, 1547
Hpy188III	TCNNGA	9 cut(s)	112, 197, 365, 379, 581, 593, 602, 700, 945
Hpy8I	GTNNAC	3 cut(s)	811, 1259, 1547
Hpy99I	CGWCG	2 cut(s)	58, 245
HpyAV	CCTTC	4 cut(s)	105, 881, 1220, 1321
HpyCH4III	ACNGT	8 cut(s)	335, 391, 446, 637, 681, 821, 1150, 1422
HpyCH4IV	ACGT	2 cut(s)	1563, 1644
HpyF10VI	GCNNNNNNNGC	3 cut(s)	969, 1298, 1702
HpyF3I	CTNAG	4 cut(s)	567, 983, 1049, 1513
HpySE526I	ACGT	2 cut(s)	1563, 1644
Hsp92I	GRCGYC	1 cut(s)	327
Hsp92II	CATG	7 cut(s)	464, 659, 874, 1043, 1274, 1410, 1616
HspAI	GCGC	5 cut(s)	118, 120, 250, 252, 327
KasI	GGCGCC	1 cut(s)	326
Kpn2I	TCCGGA	1 cut(s)	364
LguI	GCTCTTC	1 cut(s)	579
LmnI	GCTCC	3 cut(s)	139, 659, 1000
Lsp1109I	GCAGC	1 cut(s)	1714
LweI	GCATC	5 cut(s)	33, 1009, 1404, 1475, 1589
MaeI	CTAG	5 cut(s)	650, 960, 1068, 1289, 1557
MaeII	ACGT	2 cut(s)	1563, 1644
MbiI	CCGCTC	1 cut(s)	374
MboII	GAAGA	6 cut(s)	94, 271, 434, 596, 827, 1005
MfeI	CAATTG	1 cut(s)	882
MflI	RGATCY	4 cut(s)	106, 361, 401, 1553
MhlI	GDGCHC	3 cut(s)	573, 777, 1037
Mly113I	GGCGCC	1 cut(s)	327
MlyI	GAGTC	3 cut(s)	292, 485, 1294
MmeI	TCCRAC	5 cut(s)	95, 154, 326, 693, 1345
Mph1103I	ATGCAT	1 cut(s)	1024
MroI	TCCGGA	1 cut(s)	364
MroXI	GAANNNNTTC	2 cut(s)	588, 609
MseI	TTAA	3 cut(s)	285, 318, 1025
MslI	CAYNNNNRTG	1 cut(s)	1275
MspI	CCGG	6 cut(s)	43, 181, 365, 480, 969, 1706
MspR9I	CCNGG	4 cut(s)	104, 861, 1080, 1383
MunI	CAATTG	1 cut(s)	882
MvaI	CCWGG	4 cut(s)	104, 861, 1080, 1383
MvnI	CGCG	6 cut(s)	120, 252, 350, 399, 555, 1167
MwoI	GCNNNNNNNGC	3 cut(s)	969, 1298, 1702
NarI	GGCGCC	1 cut(s)	327
NcoI	CCATGG	1 cut(s)	1039
NdeI	CATATG	1 cut(s)	411
NlaIII	CATG	7 cut(s)	464, 659, 874, 1043, 1274, 1410, 1616
NlaIV	GGNNCC	8 cut(s)	185, 328, 337, 363, 484, 1035, 1036, 1657
NsiI	ATGCAT	1 cut(s)	1024
NspI	RCATGY	1 cut(s)	1616
NspV	TTCGAA	1 cut(s)	344
PaqCI	CACCTGC	1 cut(s)	460
PauI	GCGCGC	2 cut(s)	118, 250
PciI	ACATGT	1 cut(s)	1612
PciSI	GCTCTTC	1 cut(s)	579
PcsI	WCGNNNNNNNCGW	1 cut(s)	757
PdmI	GAANNNNTTC	2 cut(s)	588, 609
PfeI	GAWTC	4 cut(s)	200, 341, 955, 1368
PflFI	GACNNNGTC	1 cut(s)	307
PfoI	TCCNGGA	2 cut(s)	102, 1381
PkrI	GCNGC	5 cut(s)	373, 1303, 1660, 1704, 1722
Ple19I	CGATCG	1 cut(s)	764
PleI	GAGTC	3 cut(s)	292, 484, 1293
PluTI	GGCGCC	1 cut(s)	330
PmaCI	CACGTG	1 cut(s)	1564
PmlI	CACGTG	1 cut(s)	1564
PpsI	GAGTC	3 cut(s)	292, 484, 1293
Ppu21I	YACGTR	1 cut(s)	1564
PpuMI	RGGWCCY	1 cut(s)	911
PscI	ACATGT	1 cut(s)	1612
Psp124BI	GAGCTC	1 cut(s)	777
Psp5II	RGGWCCY	1 cut(s)	911
Psp6I	CCWGG	4 cut(s)	102, 859, 1078, 1381
PspCI	CACGTG	1 cut(s)	1564
PspFI	CCCAGC	1 cut(s)	1083
PspGI	CCWGG	4 cut(s)	102, 859, 1078, 1381
PspN4I	GGNNCC	8 cut(s)	185, 328, 337, 363, 484, 1035, 1036, 1657
PspOMI	GGGCCC	1 cut(s)	1033
PspPI	GGNCC	8 cut(s)	145, 482, 911, 1033, 1034, 1313, 1379, 1547
PspPPI	RGGWCCY	1 cut(s)	911
PstNI	CAGNNNCTG	1 cut(s)	1106
PsuI	RGATCY	4 cut(s)	106, 361, 401, 1553
PsyI	GACNNNGTC	1 cut(s)	307
PteI	GCGCGC	2 cut(s)	118, 250
PvuI	CGATCG	1 cut(s)	764
RsaI	GTAC	2 cut(s)	1494, 1504
RsaNI	GTAC	2 cut(s)	1493, 1503
RseI	CAYNNNNRTG	1 cut(s)	1275
SacI	GAGCTC	1 cut(s)	777
SapI	GCTCTTC	1 cut(s)	579
SaqAI	TTAA	3 cut(s)	285, 318, 1025
SatI	GCNGC	5 cut(s)	372, 1302, 1659, 1703, 1721
Sau96I	GGNCC	8 cut(s)	145, 482, 911, 1033, 1034, 1313, 1379, 1547
SchI	GAGTC	3 cut(s)	292, 485, 1294
ScrFI	CCNGG	4 cut(s)	104, 861, 1080, 1383
SduI	GDGCHC	3 cut(s)	573, 777, 1037
SfaNI	GCATC	5 cut(s)	33, 1009, 1404, 1475, 1589
SfoI	GGCGCC	1 cut(s)	328
SfuI	TTCGAA	1 cut(s)	344
SinI	GGWCC	6 cut(s)	145, 482, 911, 1313, 1379, 1547
SmiMI	CAYNNNNRTG	1 cut(s)	1275
SmlI	CTYRAG	1 cut(s)	377
SmoI	CTYRAG	1 cut(s)	377
SsiI	CCGC	8 cut(s)	209, 350, 372, 399, 555, 1250, 1302, 1659
SspDI	GGCGCC	1 cut(s)	326
SspMI	CTAG	5 cut(s)	650, 960, 1068, 1289, 1557
SstI	GAGCTC	1 cut(s)	777
StyD4I	CCNGG	4 cut(s)	102, 859, 1078, 1381
StyI	CCWWGG	1 cut(s)	1039
TaaI	ACNGT	8 cut(s)	335, 391, 446, 637, 681, 821, 1150, 1422
TaiI	ACGT	2 cut(s)	1566, 1647
TaqI	TCGA	5 cut(s)	198, 296, 344, 751, 764
TaqII	GACCGA	1 cut(s)	1564
TatI	WGTACW	1 cut(s)	1502
TauI	GCSGC	3 cut(s)	374, 1304, 1661
TfiI	GAWTC	4 cut(s)	200, 341, 955, 1368
Tru1I	TTAA	3 cut(s)	285, 318, 1025
Tru9I	TTAA	3 cut(s)	285, 318, 1025
TseI	GCWGC	2 cut(s)	1702, 1720
TspDTI	ATGAA	6 cut(s)	74, 192, 511, 887, 1107, 1584
TspGWI	ACGGA	1 cut(s)	1421
Tth111I	GACNNNGTC	1 cut(s)	307
VpaK11BI	GGWCC	6 cut(s)	145, 482, 911, 1313, 1379, 1547
XapI	RAATTY	3 cut(s)	796, 1094, 1536
XceI	RCATGY	1 cut(s)	1616
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1568
XmiI	GTMKAC	1 cut(s)	1258
XmnI	GAANNNNTTC	2 cut(s)	588, 609
XspI	CTAG	5 cut(s)	650, 960, 1068, 1289, 1557
Zsp2I	ATGCAT	1 cut(s)	1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.