Rh7BG284700

bromo domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
26758475 .. 26762800
4326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG284700.1

Sequence Viewer

Length: 1527 bp
ATGTTGGTTCAGCTGCCTGATTATCATGAAATCATTGAAAACCCGATGGATTTTGGAACTGTCAGGGAGAAACTGGATCGGGGAGCCTATGCCAACTTGGAACAGTTTGAGAAAGATGTCTTCTTGATATCTTCAAATGCAATGCAGTATAATGCACCAGACACGATTTATTTCCGACAGGCACGGTCTATCCAAGAACTTGCGAAAAAGGACTTTGAAAATTTGAGGCAAGACAACACCGGTGATGGTGGTGAGCCCAAACCAAAAGTTGCCAGGAGAGGCAGGCCACCTGGCAGCAAGACCATGAAAAAGTCGATTGACTTGGCTCCAGTTGAACGTCTTGGTCCTCAATATTTCTCAGAAGCGACTCTTCCCCCTGGAGGAGAGACTTCGAGCTTGTCCAATAGTTACAATTTGAGAAAAGGACCCGCTTCATACAAGTTTAGGACTGCTGATGCATTAAACAGAGCTCCACATGGATCTCTTGGTGGTGATACTAATGCTAACTGGTTGTCTGAATTGGAGAATGAATTTCCGGCTTCAGTATTGAGGAGCGTGCTAAGGTATGGAAAGAAACAGTTTCCAGTAGACGAGAACAGACGTGAAACCTATAGGCAGTCTCTGGCTTCAGAACATGAACCATCTGAACTTACTGGTCTCGAAGGGGAGTGGAACCAACTTATGGCGGTAGGTGTAGCTGCGGAGGAGCATGGTTATGCAAGAAGTATGGCTCGATTTGCTGCAAATCTTGGACCTGTTGCTTGGAAGATTGCTTCTAAGCGGATAGGAAGTGTTTTGCCTATTGGAGTTGAGTTTGGTCCTGGATGGGTAGGAGAAAATGAGTCATCAAGGTTGCAGCAGTTTTCATTCCGTCAGGGAGAGGATAAGGTTCAATGCAACCCTGCATCTGATGACCATAAAGACAGACTTCGATGTCAAAGTACATCAGGCCTAAATTCTGTTGCAGATAGATATTTGCTGCAAAACGGTGTTAACATGGAAAACTGTAGAGAATTCAATTCCCAAAATGGGTTGGCATCACTTAACAGTGGTGTTAGTGGGATACGACCTGTGCCTCCTTTCCAGAATTCCATGATTCACTATGGTAATCCTGGTTTGAATAGTAGGTTTATGTCTAGTGTTTTACCTCAACCTGAGAATGTTAATATGCCTGCCACATTAACAGGGATGTCAAGTTCGACCAACACTTCAGTACCTTCTCATCATCAAATGGTCGGCATGTTTTCAGAGAGGAATATGAACACACAGTCGATGCCTATAGGCGATATTGATTCAAATGAAGCCAGATCAGAAATTTCAAGTAGATCAAGGAATCCCTTAGCCCAAGCACAACCTCAATTGGCGTATGGTGGGGAAACTTCTTGGCAGGGTTTATCGATGAACAATAAACAGGTTTCTTATTCATTACCCCCGGACCTGAATGTTGAATTTGGTGCACCAGGCTCTCCCAGTTCTCTTATTCAAATTGGCATGCCACAGCAACCAGATTTAGCTTTGCAACTTTGA

Protein Analysis

508

Amino Acids

55.97

Weight (kDa)

5.87

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 3 - 62 1.8e-17 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 933
AccB7I CCANNNNNTGG 1 cut(s) 682
AccI GTMKAC 1 cut(s) 588
AciI CCGC 4 cut(s) 429, 686, 701, 781
AclWI GGATC 2 cut(s) 84, 487
AcsI RAATTY 7 cut(s) 220, 530, 955, 1013, 1087, 1314, 1448
AcuI CTGAAG 3 cut(s) 525, 612, 1194
AfaI GTAC 2 cut(s) 943, 1215
AfiI CCNNNNNNNGG 3 cut(s) 380, 682, 1029
AgeI ACCGGT 1 cut(s) 239
AjiI CACGTC 1 cut(s) 602
AjnI CCWGG 6 cut(s) 272, 289, 376, 820, 1111, 1459
AloI GAACNNNNNNTCC 2 cut(s) 1180, 1212
AluBI AGCT 5 cut(s) 13, 396, 470, 698, 1514
AluI AGCT 5 cut(s) 13, 396, 470, 698, 1514
Alw21I GWGCWC 2 cut(s) 472, 1459
Alw26I GTCTC 3 cut(s) 380, 624, 662
Alw44I GTGCAC 1 cut(s) 1455
AlwI GGATC 2 cut(s) 84, 487
AlwNI CAGNNNCTG 1 cut(s) 622
AoxI GGCC 2 cut(s) 284, 949
ApaLI GTGCAC 1 cut(s) 1455
ApeKI GCWGC 6 cut(s) 13, 294, 698, 740, 856, 979
ApoI RAATTY 7 cut(s) 220, 530, 955, 1013, 1087, 1314, 1448
AsiGI ACCGGT 1 cut(s) 239
AspS9I GGNCC 5 cut(s) 344, 425, 752, 818, 1435
AsuC2I CCSGG 1 cut(s) 1433
AsuHPI GGTGA 3 cut(s) 254, 263, 503
AvaII GGWCC 5 cut(s) 344, 425, 752, 818, 1435
BaeGI GKGCMC 1 cut(s) 1459
BaeI ACNNNNGTAYC 2 cut(s) 1197, 1230
BanII GRGCYC 2 cut(s) 258, 472
BbsI GAAGAC 1 cut(s) 112
Bbv12I GWGCWC 2 cut(s) 472, 1459
BbvI GCAGC 5 cut(s) 306, 685, 727, 868, 966
BccI CCATC 4 cut(s) 40, 239, 649, 819
BciT130I CCWGG 6 cut(s) 274, 291, 378, 822, 1113, 1461
BciVI GTATCC 1 cut(s) 1056
BcnI CCSGG 1 cut(s) 1433
BcoDI GTCTC 3 cut(s) 380, 624, 662
BfaI CTAG 1 cut(s) 1137
BfmI CTRYAG 3 cut(s) 610, 1006, 1278
BfuI GTATCC 1 cut(s) 1056
BisI GCNGC 6 cut(s) 14, 295, 699, 741, 857, 980
BlsI GCNGC 6 cut(s) 15, 296, 700, 742, 858, 981
Bme1390I CCNGG 7 cut(s) 274, 291, 378, 822, 1113, 1433, 1461
Bme18I GGWCC 5 cut(s) 344, 425, 752, 818, 1435
BmgBI CACGTC 1 cut(s) 602
BmgT120I GGNCC 5 cut(s) 344, 425, 752, 818, 1435
BmiI GGNNCC 4 cut(s) 85, 327, 427, 674
BmrFI CCNGG 7 cut(s) 274, 291, 378, 822, 1113, 1433, 1461
BmrI ACTGGG 1 cut(s) 1464
BmsI GCATC 4 cut(s) 445, 914, 1046, 1263
BmuI ACTGGG 1 cut(s) 1464
BpiI GAAGAC 1 cut(s) 112
BpmI CTGGAG 2 cut(s) 312, 399
Bpu10I CCTNAGC 2 cut(s) 560, 1339
BpuMI CCSGG 1 cut(s) 1433
Bsa29I ATCGAT 1 cut(s) 1397
BsaI GGTCTC 1 cut(s) 662
BsaJI CCNNGG 2 cut(s) 376, 1431
BsaWI WCCGGW 1 cut(s) 239
Bsc4I CCNNNNNNNGG 3 cut(s) 380, 682, 1029
Bse118I RCCGGY 1 cut(s) 239
Bse1I ACTGG 6 cut(s) 78, 329, 512, 584, 658, 1470
Bse3DI GCAATG 1 cut(s) 147
BseBI CCWGG 6 cut(s) 274, 291, 378, 822, 1113, 1461
BseCI ATCGAT 1 cut(s) 1397
BseDI CCNNGG 2 cut(s) 376, 1431
BseGI GGATG 2 cut(s) 830, 1194
BseLI CCNNNNNNNGG 3 cut(s) 380, 682, 1029
BseMI GCAATG 1 cut(s) 147
BseMII CTCAG 2 cut(s) 372, 1146
BseNI ACTGG 6 cut(s) 78, 329, 512, 584, 658, 1470
BseRI GAGGAG 3 cut(s) 396, 565, 719
BseSI GKGCMC 1 cut(s) 1459
BseXI GCAGC 5 cut(s) 306, 685, 727, 868, 966
BshFI GGCC 2 cut(s) 286, 951
BshTI ACCGGT 1 cut(s) 239
BshVI ATCGAT 1 cut(s) 1397
BsiHKAI GWGCWC 2 cut(s) 472, 1459
BsiSI CCGG 3 cut(s) 240, 536, 1433
BslI CCNNNNNNNGG 3 cut(s) 380, 682, 1029
BsmAI GTCTC 3 cut(s) 380, 624, 662
BsnI GGCC 2 cut(s) 286, 951
Bso31I GGTCTC 1 cut(s) 662
Bsp1286I GDGCHC 3 cut(s) 258, 472, 1459
Bsp143I GATC 4 cut(s) 76, 479, 1307, 1325
BspACI CCGC 4 cut(s) 429, 686, 701, 781
BspANI GGCC 2 cut(s) 286, 951
BspCNI CTCAG 2 cut(s) 371, 1147
BspDI ATCGAT 1 cut(s) 1397
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 4 cut(s) 85, 327, 427, 674
BspPI GGATC 2 cut(s) 84, 487
BspTNI GGTCTC 1 cut(s) 662
BsrDI GCAATG 1 cut(s) 147
BsrFI RCCGGY 1 cut(s) 239
BsrI ACTGG 6 cut(s) 78, 329, 512, 584, 658, 1470
BssAI RCCGGY 1 cut(s) 239
BssECI CCNNGG 2 cut(s) 376, 1431
BssMI GATC 4 cut(s) 76, 479, 1307, 1325
Bst2UI CCWGG 6 cut(s) 274, 291, 378, 822, 1113, 1461
Bst4CI ACNGT 8 cut(s) 61, 105, 186, 579, 989, 1007, 1049, 1269
Bst6I CTCTTC 1 cut(s) 375
BstC8I GCNNGC 4 cut(s) 284, 557, 1173, 1493
BstDEI CTNAG 5 cut(s) 358, 560, 777, 1155, 1339
BstF5I GGATG 2 cut(s) 830, 1194
BstKTI GATC 4 cut(s) 79, 482, 1310, 1328
BstMAI GTCTC 3 cut(s) 380, 624, 662
BstMBI GATC 4 cut(s) 76, 479, 1307, 1325
BstMWI GCNNNNNNNGC 1 cut(s) 737
BstNI CCWGG 6 cut(s) 274, 291, 378, 822, 1113, 1461
BstNSI RCATGY 2 cut(s) 1243, 1495
BstSCI CCNGG 7 cut(s) 272, 289, 376, 820, 1111, 1431, 1459
BstSFI CTRYAG 3 cut(s) 610, 1006, 1278
BstSLI GKGCMC 1 cut(s) 1459
BstV1I GCAGC 5 cut(s) 306, 685, 727, 868, 966
BstV2I GAAGAC 1 cut(s) 112
BstX2I RGATCY 1 cut(s) 479
BstYI RGATCY 1 cut(s) 479
Bsu15I ATCGAT 1 cut(s) 1397
BsuI GTATCC 1 cut(s) 1056
BsuRI GGCC 2 cut(s) 286, 951
BsuTUI ATCGAT 1 cut(s) 1397
BtrI CACGTC 1 cut(s) 602
BtsCI GGATG 2 cut(s) 830, 1194
BtsIMutI CAGTG 1 cut(s) 1054
Cac8I GCNNGC 4 cut(s) 284, 557, 1173, 1493
CaiI CAGNNNCTG 1 cut(s) 622
CciI TCATGA 1 cut(s) 25
Cfr10I RCCGGY 1 cut(s) 239
Cfr13I GGNCC 5 cut(s) 344, 425, 752, 818, 1435
ClaI ATCGAT 1 cut(s) 1397
Csp6I GTAC 2 cut(s) 942, 1214
CspAI ACCGGT 1 cut(s) 239
CviAII CATG 9 cut(s) 26, 304, 476, 635, 710, 997, 1093, 1240, 1492
CviQI GTAC 2 cut(s) 942, 1214
DdeI CTNAG 5 cut(s) 358, 560, 777, 1155, 1339
DpnI GATC 4 cut(s) 78, 481, 1309, 1327
DpnII GATC 4 cut(s) 76, 479, 1307, 1325
DrdI GACNNNNNNGTC 1 cut(s) 933
DseDI GACNNNNNNGTC 1 cut(s) 933
Eam1104I CTCTTC 1 cut(s) 375
EarI CTCTTC 1 cut(s) 375
Ecl136II GAGCTC 1 cut(s) 470
Eco147I AGGCCT 1 cut(s) 951
Eco24I GRGCYC 2 cut(s) 258, 472
Eco31I GGTCTC 1 cut(s) 662
Eco32I GATATC 1 cut(s) 129
Eco47I GGWCC 5 cut(s) 344, 425, 752, 818, 1435
Eco53kI GAGCTC 1 cut(s) 470
Eco57I CTGAAG 3 cut(s) 525, 612, 1194
EcoICRI GAGCTC 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 425
EcoRI GAATTC 2 cut(s) 1013, 1087
EcoRII CCWGG 6 cut(s) 272, 289, 376, 820, 1111, 1459
EcoRV GATATC 1 cut(s) 129
EcoT22I ATGCAT 1 cut(s) 460
EcoT38I GRGCYC 2 cut(s) 258, 472
FaeI CATG 9 cut(s) 29, 307, 479, 638, 713, 1000, 1096, 1243, 1495
FalI AAGNNNNNCTT 4 cut(s) 354, 386, 912, 944
FatI CATG 9 cut(s) 25, 303, 475, 634, 709, 996, 1092, 1239, 1491
FauI CCCGC 1 cut(s) 436
FblI GTMKAC 1 cut(s) 588
Fnu4HI GCNGC 6 cut(s) 14, 295, 699, 741, 857, 980
FokI GGATG 2 cut(s) 837, 1201
FriOI GRGCYC 2 cut(s) 258, 472
Fsp4HI GCNGC 6 cut(s) 14, 295, 699, 741, 857, 980
FspBI CTAG 1 cut(s) 1137
GluI GCNGC 6 cut(s) 14, 295, 699, 741, 857, 980
GsuI CTGGAG 2 cut(s) 312, 399
HaeIII GGCC 2 cut(s) 286, 951
HapII CCGG 3 cut(s) 240, 536, 1433
Hin1II CATG 9 cut(s) 29, 307, 479, 638, 713, 1000, 1096, 1243, 1495
HincII GTYRAC 1 cut(s) 994
HindII GTYRAC 1 cut(s) 994
HinfI GANTC 5 cut(s) 367, 842, 1096, 1292, 1333
HpaI GTTAAC 1 cut(s) 994
HpaII CCGG 3 cut(s) 240, 536, 1433
HphI GGTGA 3 cut(s) 254, 263, 503
Hpy166II GTNNAC 3 cut(s) 589, 994, 1457
Hpy188I TCNGA 8 cut(s) 176, 361, 517, 631, 646, 910, 1249, 1312
Hpy188III TCNNGA 4 cut(s) 26, 124, 659, 1084
Hpy8I GTNNAC 3 cut(s) 589, 994, 1457
HpyAV CCTTC 2 cut(s) 656, 1227
HpyCH4III ACNGT 8 cut(s) 61, 105, 186, 579, 989, 1007, 1049, 1269
HpyCH4IV ACGT 2 cut(s) 337, 601
HpyF10VI GCNNNNNNNGC 1 cut(s) 737
HpyF3I CTNAG 5 cut(s) 358, 560, 777, 1155, 1339
HpySE526I ACGT 2 cut(s) 337, 601
Hsp92II CATG 9 cut(s) 29, 307, 479, 638, 713, 1000, 1096, 1243, 1495
KspAI GTTAAC 1 cut(s) 994
Kzo9I GATC 4 cut(s) 76, 479, 1307, 1325
LmnI GCTCC 5 cut(s) 83, 331, 475, 552, 706
Lsp1109I GCAGC 5 cut(s) 306, 685, 727, 868, 966
LweI GCATC 4 cut(s) 445, 914, 1046, 1263
MaeI CTAG 1 cut(s) 1137
MaeII ACGT 2 cut(s) 337, 601
MaeIII GTNAC 1 cut(s) 407
MalI GATC 4 cut(s) 78, 481, 1309, 1327
MboI GATC 4 cut(s) 76, 479, 1307, 1325
MboII GAAGA 4 cut(s) 112, 123, 362, 778
MfeI CAATTG 1 cut(s) 1358
MflI RGATCY 1 cut(s) 479
MhlI GDGCHC 3 cut(s) 258, 472, 1459
MlyI GAGTC 2 cut(s) 361, 851
MmeI TCCRAC 1 cut(s) 199
Mph1103I ATGCAT 1 cut(s) 460
MseI TTAA 5 cut(s) 461, 993, 1044, 1164, 1181
MslI CAYNNNNRTG 1 cut(s) 714
MspA1I CMGCKG 1 cut(s) 13
MspI CCGG 3 cut(s) 240, 536, 1433
MspR9I CCNGG 7 cut(s) 274, 291, 378, 822, 1113, 1433, 1461
MunI CAATTG 1 cut(s) 1358
MvaI CCWGG 6 cut(s) 274, 291, 378, 822, 1113, 1461
MwoI GCNNNNNNNGC 1 cut(s) 737
NciI CCSGG 1 cut(s) 1433
NdeII GATC 4 cut(s) 76, 479, 1307, 1325
NlaIII CATG 9 cut(s) 29, 307, 479, 638, 713, 1000, 1096, 1243, 1495
NlaIV GGNNCC 4 cut(s) 85, 327, 427, 674
NsiI ATGCAT 1 cut(s) 460
NspI RCATGY 2 cut(s) 1243, 1495
PaeI GCATGC 1 cut(s) 1495
PagI TCATGA 1 cut(s) 25
PceI AGGCCT 1 cut(s) 951
PfeI GAWTC 3 cut(s) 1096, 1292, 1333
PflMI CCANNNNNTGG 1 cut(s) 682
PfoI TCCNGGA 1 cut(s) 820
PinAI ACCGGT 1 cut(s) 239
PkrI GCNGC 6 cut(s) 15, 296, 700, 742, 858, 981
PleI GAGTC 2 cut(s) 361, 850
PpsI GAGTC 2 cut(s) 361, 850
PpuMI RGGWCCY 1 cut(s) 425
Psp124BI GAGCTC 1 cut(s) 472
Psp5II RGGWCCY 1 cut(s) 425
Psp6I CCWGG 6 cut(s) 272, 289, 376, 820, 1111, 1459
PspGI CCWGG 6 cut(s) 272, 289, 376, 820, 1111, 1459
PspN4I GGNNCC 4 cut(s) 85, 327, 427, 674
PspPI GGNCC 5 cut(s) 344, 425, 752, 818, 1435
PspPPI RGGWCCY 1 cut(s) 425
PstNI CAGNNNCTG 1 cut(s) 622
PsuI RGATCY 1 cut(s) 479
PvuII CAGCTG 1 cut(s) 13
RsaI GTAC 2 cut(s) 943, 1215
RsaNI GTAC 2 cut(s) 942, 1214
RseI CAYNNNNRTG 1 cut(s) 714
SacI GAGCTC 1 cut(s) 472
SaqAI TTAA 5 cut(s) 461, 993, 1044, 1164, 1181
SatI GCNGC 6 cut(s) 14, 295, 699, 741, 857, 980
Sau3AI GATC 4 cut(s) 76, 479, 1307, 1325
Sau96I GGNCC 5 cut(s) 344, 425, 752, 818, 1435
SchI GAGTC 2 cut(s) 361, 851
ScrFI CCNGG 7 cut(s) 274, 291, 378, 822, 1113, 1433, 1461
SduI GDGCHC 3 cut(s) 258, 472, 1459
SfaNI GCATC 4 cut(s) 445, 914, 1046, 1263
SfcI CTRYAG 3 cut(s) 610, 1006, 1278
SgrAI CRCCGGYG 1 cut(s) 239
SinI GGWCC 5 cut(s) 344, 425, 752, 818, 1435
SmiMI CAYNNNNRTG 1 cut(s) 714
SphI GCATGC 1 cut(s) 1495
SseBI AGGCCT 1 cut(s) 951
SsiI CCGC 4 cut(s) 429, 686, 701, 781
SspI AATATT 1 cut(s) 353
SspMI CTAG 1 cut(s) 1137
SstI GAGCTC 1 cut(s) 472
StuI AGGCCT 1 cut(s) 951
StyD4I CCNGG 7 cut(s) 272, 289, 376, 820, 1111, 1431, 1459
TaaI ACNGT 8 cut(s) 61, 105, 186, 579, 989, 1007, 1049, 1269
TaiI ACGT 2 cut(s) 340, 604
TaqI TCGA 8 cut(s) 314, 392, 660, 733, 931, 1199, 1271, 1397
TatI WGTACW 1 cut(s) 941
TfiI GAWTC 3 cut(s) 1096, 1292, 1333
Tru1I TTAA 5 cut(s) 461, 993, 1044, 1164, 1181
Tru9I TTAA 5 cut(s) 461, 993, 1044, 1164, 1181
TscAI CASTG 1 cut(s) 1054
TseI GCWGC 6 cut(s) 13, 294, 698, 740, 856, 979
TspGWI ACGGA 1 cut(s) 860
TspRI CASTG 1 cut(s) 1054
Van91I CCANNNNNTGG 1 cut(s) 682
VneI GTGCAC 1 cut(s) 1455
VpaK11BI GGWCC 5 cut(s) 344, 425, 752, 818, 1435
XapI RAATTY 7 cut(s) 220, 530, 955, 1013, 1087, 1314, 1448
XceI RCATGY 2 cut(s) 1243, 1495
XmiI GTMKAC 1 cut(s) 588
XspI CTAG 1 cut(s) 1137
Zsp2I ATGCAT 1 cut(s) 460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.