Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0005759

Physical Location & Seq

Genomic Coordinates Forward (+)

1608429 .. 1615091

Gene Structure 6663 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1012600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGAACGACGACGACAGTCTCCGCCACGATCTGGACCCACAAAGCGACCACAGCTCCGATTACCTCCCTCACCCCCACCATTCGTCCCACCCTATCCAACCCCAACAATCCCACCCTCAGCCCCAGCCCCAGCCCCGCCGTCCCCGTGGCTTCGCCGCCACTGCGGCTGGCTCAGCGGGTCCCACCAGTCCCTCCTCCACCCCCACCACTAACAAGGGCAAGAGGGAGAGGGAGAAGGAGAAGGAGCGCACCAAGCTTCGAGAACGCCTCCGTCGATCCATCACTAGCCGGATGCTCGCCGGCCTCCGCCAATACGGCAACTTTCCGCTGCCTGCGCGTGCGGACATGAACGATGTGCTCGCAGCCCTCGCACGTGAGGCCGGCTGGGTCGTCGAGCCCGACGGCACCACTTACCGCCACTCTCCTCCTCCCTCCCAAATGGCAGCGGCGTACCAGAACCCCATGGGTATGAGGTCGGTGGAGAGCCCAGTTTCATCAGGAGTAAAAGCAACGAACCCATCATCAATGGCGAGAATTGATGAGAGCTTGTCACCGGCATCCCTTGATTCTGTAGTAATTGGAGAGAGAGACACCACAGCCACAGCCACAGCCACAGCCACCGCCACGGTCACTGCCGCCACCAACAACTCCGTTGAATGCTTGGAAATGGAGGCTGGTGATCAGCTCATGCATCACCTTTCCAATTCCATCAGTTCCGGGGACCATGGCATTCCCACCACTGCCTTGGCTTATGTTCCTCTCTATGCTGCCCTTGCCACTGGGTTCATCAACAGTTACTGTCAGTTGGTTGATCCTGAAGGATTGAGACAGGAGCTAGCTCATGTGCAATCTCTGAATATAGATGGTGTTGTTGTGGATTGTTGGTGGGGGATTGTCGAAGGCTGGAGCCCCCAGAAATATGTCTGGTCTGGTTACAGAGCTCTTTTTAACATCGTCCGGGAGTTTAAGCTCAAATTGCAGGTTGTGATGGCATTTCATGAGTATGGAAGAAGTGAGTCTGGTGACGCCCTCATCCCTCTTCCACAATGGATCTTAGAAATTGGTAAGAAAAACCCAGACATATTCTTTACAGATCGAGAAGGAAGGAGGAACACTGAATGTCTATCTCTTGGGATTGATAAAGAAAGAGTTTTACAAGGAAGAACTGGTGTCGAGGTCTATTTTGATTTTATGAGAAGTTTTCGTACTGAGTTTGACGACTTGTTTACTGAGGGTCTCATTTCTGCTGTGGAAATTGGACTTGGAGCATCTGGGGAGCTCAAGTATCCTTCCTTTTCAGAAAGGATGGGGTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGTTATGATAGATATTTACAACAGAGTCTGCAGAAAGCTGCTAAATTGCGTGGGCACTCATTCTGGGCCAGGGGACCTGAGAATGCTGGGGAATACAATTCTCGGCCACATGAAACTGGCTTTTTCTGTGAACGTGGTGATTATGATAGTTATTATGGACGCTTTTTCCTTCATTGGTATGCACAGTCACTAATTGATCACGCGGATAGTGTACTGTCTCTTGCAAGCCTTGCCTTTGATGAAACCAAATTAATTGTCAAGGTTCCTGCAGTTTTTTGGTGGTATAAGACTACTAGCCATGCAGCCGAGCTAACTTCTGGGTACTATAACCCAACAAACCAGGATGGGTACTCTCCCATTTTTGAAGTTCTGAAGAAACATTTAGCGACGGTGAAGTTTGTTTGCTCAGGTCCACAGATTTCTAGTCAGGATAATGAAGCACTGGCTGATCCGGAAGGTTTGAGTTGGCAGGTTTTAAATTTAGCCTGGGATCGAGGATTGACTGTAGCTGGTGAAAATGCACTTTCATGTTATGATAGAGAAGGGTGCATGAGAATAGTTGAGATGGTCAAGCCAAGAAATGATCCTGATCGTCACCACTTTTCATTTTTCGTATACCAGCAGCCGTCTCCTCTAGTTCAAGGCACAATTTGCTTTCCTGAGTTGGGTTTTTTCATTAAGTGCATGCATGGTGAGAGTGCTGAAGATCTAGTATCGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

BES1_N Glyco_hydro_14

Protein Analysis

688

Amino Acids

76.74

Weight (kDa)

5.68

Isoelectric Point (pI)

46.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	72 - 204	2.7e-44	BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14	PF01373	268 - 642	1.7e-98	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45300 AT5G45300 AT5G45300
fragaria_vesca	FvH4_5g24520 FvH4_5g24520 FvH4_5g24520 FvH4_5g24520 FvH4_5g24520
malus_domestica	MD06G1012600.v1.1
prunus_persica	Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1
pyrus_communis	pycom06g01050
rosa_chinensis	RchiOBHm_Chr7g0215001
rosa_laevigata	RLG00000002702
rosa_multiflora	Rmu_co8013204.1_g000001 Rmu_sc0004525.1_g000013 Rmu_ssc0000134.1_g000045
rosa_roxburghii	Rroxscaffold_3G00244800
rosa_rugosa	Rorug07G0149100
rosa_samantha	Rh7AG286200 Rh7BG277900 Rh7CG305300 Rh7CG305400 Rh7DG289500
rosa_wichuraiana	Rw7G024410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	970, 1801
AccB1I	GGYRCC	1 cut(s)	404
AccB7I	CCANNNNNTGG	1 cut(s)	31
AccI	GTMKAC	1 cut(s)	1956
AccII	CGCG	2 cut(s)	337, 1544
AccIII	TCCGGA	1 cut(s)	1792
AclWI	GGATC	6 cut(s)	270, 806, 1058, 1784, 1839, 1919
AcoI	YGGCCR	1 cut(s)	1445
AcsI	RAATTY	1 cut(s)	1819
AcuI	CTGAAG	3 cut(s)	837, 1733, 2064
AcvI	CACGTG	1 cut(s)	374
AcyI	GRCGYC	1 cut(s)	1026
AfaI	GTAC	5 cut(s)	452, 1207, 1554, 1664, 1691
AfiI	CCNNNNNNNGG	3 cut(s)	31, 1328, 2006
AgsI	TTSAA	3 cut(s)	656, 1706, 1982
AjnI	CCWGG	4 cut(s)	1321, 1409, 1680, 1826
AjuI	GAANNNNNNNTTGG	2 cut(s)	1245, 1277
Alw21I	GWGCWC	3 cut(s)	360, 943, 1281
Alw26I	GTCTC	6 cut(s)	23, 582, 820, 1241, 1563, 1974
AlwI	GGATC	6 cut(s)	270, 806, 1058, 1784, 1839, 1919
AlwNI	CAGNNNCTG	2 cut(s)	798, 1369
Aor13HI	TCCGGA	1 cut(s)	1792
AoxI	GGCC	4 cut(s)	301, 378, 1407, 1445
ApeKI	GCWGC	7 cut(s)	328, 362, 443, 767, 1379, 1643, 1963
ApoI	RAATTY	1 cut(s)	1819
ArsI	GACNNNNNNTTYG	2 cut(s)	1581, 1613
AseI	ATTAAT	1 cut(s)	1592
AspLEI	GCGC	2 cut(s)	249, 337
AspS9I	GGNCC	6 cut(s)	34, 179, 721, 1407, 1415, 1751
AsuC2I	CCSGG	2 cut(s)	718, 959
AsuNHI	GCTAGC	1 cut(s)	835
AvaII	GGWCC	5 cut(s)	34, 179, 721, 1415, 1751
BaeGI	GKGCMC	1 cut(s)	1398
BanI	GGYRCC	1 cut(s)	404
BanII	GRGCYC	5 cut(s)	399, 488, 911, 943, 1281
BarI	GAAGNNNNNNTAC	2 cut(s)	1189, 1221
BbrPI	CACGTG	1 cut(s)	374
Bbv12I	GWGCWC	3 cut(s)	360, 943, 1281
BbvCI	CCTCAGC	1 cut(s)	117
BbvI	GCAGC	7 cut(s)	315, 374, 455, 754, 1366, 1655, 1975
BccI	CCATC	8 cut(s)	287, 526, 716, 857, 982, 1300, 1679, 1900
BceAI	ACGGC	4 cut(s)	123, 331, 418, 1951
BciT130I	CCWGG	4 cut(s)	1323, 1411, 1682, 1828
BciVI	GTATCC	2 cut(s)	1296, 1329
BclI	TGATCA	2 cut(s)	679, 1537
BcnI	CCSGG	2 cut(s)	718, 959
BcoDI	GTCTC	6 cut(s)	23, 582, 820, 1241, 1563, 1974
BfaI	CTAG	6 cut(s)	285, 836, 1635, 1764, 1976, 2051
BfmI	CTRYAG	4 cut(s)	570, 1370, 1608, 1845
BfuAI	ACCTGC	2 cut(s)	970, 1801
BfuI	GTATCC	2 cut(s)	1296, 1329
BglI	GCCNNNNNGGC	2 cut(s)	164, 315
BglII	AGATCT	1 cut(s)	2047
BlpI	GCTNAGC	1 cut(s)	172
Bme1390I	CCNGG	6 cut(s)	718, 959, 1323, 1411, 1682, 1828
Bme18I	GGWCC	5 cut(s)	34, 179, 721, 1415, 1751
BmgT120I	GGNCC	6 cut(s)	34, 179, 721, 1407, 1415, 1751
BmiI	GGNNCC	8 cut(s)	36, 180, 181, 406, 722, 908, 1416, 1605
BmrFI	CCNGG	6 cut(s)	718, 959, 1323, 1411, 1682, 1828
BmrI	ACTGGG	2 cut(s)	482, 789
BmsI	GCATC	4 cut(s)	282, 566, 700, 1277
BmtI	GCTAGC	1 cut(s)	839
BmuI	ACTGGG	2 cut(s)	482, 789
BoxI	GACNNNNGTC	1 cut(s)	15
BplI	GAGNNNNNCTC	2 cut(s)	252, 284
BpmI	CTGGAG	1 cut(s)	925
Bpu10I	CCTNAGC	2 cut(s)	117, 1747
Bpu1102I	GCTNAGC	1 cut(s)	172
BpuEI	CTTGAG	1 cut(s)	1265
BpuMI	CCSGG	2 cut(s)	718, 959
BsaAI	YACGTR	1 cut(s)	374
BsaBI	GATNNNNATC	1 cut(s)	1929
BsaHI	GRCGYC	1 cut(s)	1026
BsaI	GGTCTC	1 cut(s)	1241
BsaJI	CCNNGG	8 cut(s)	145, 462, 624, 717, 724, 744, 1410, 1827
BsaWI	WCCGGW	1 cut(s)	1792
BsaXI	ACNNNNNCTCC	4 cut(s)	38, 68, 1268, 1298
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 1328, 2006
Bse118I	RCCGGY	3 cut(s)	299, 380, 553
Bse1I	ACTGG	6 cut(s)	186, 488, 784, 1171, 1462, 1788
Bse8I	GATNNNNATC	1 cut(s)	1929
BseAI	TCCGGA	1 cut(s)	1792
BseBI	CCWGG	4 cut(s)	1323, 1411, 1682, 1828
BseDI	CCNNGG	8 cut(s)	145, 462, 624, 717, 724, 744, 1410, 1827
BseGI	GGATG	5 cut(s)	297, 557, 1032, 1311, 1690
BseJI	GATNNNNATC	1 cut(s)	1929
BseLI	CCNNNNNNNGG	3 cut(s)	31, 1328, 2006
BseMII	CTCAG	7 cut(s)	131, 186, 1200, 1221, 1410, 1761, 1992
BseNI	ACTGG	6 cut(s)	186, 488, 784, 1171, 1462, 1788
BseRI	GAGGAG	4 cut(s)	184, 414, 417, 1962
BseSI	GKGCMC	1 cut(s)	1398
BseXI	GCAGC	7 cut(s)	315, 374, 455, 754, 1366, 1655, 1975
BseYI	CCCAGC	4 cut(s)	123, 129, 384, 1427
Bsh1236I	CGCG	2 cut(s)	337, 1544
BshFI	GGCC	4 cut(s)	303, 380, 1409, 1447
BshNI	GGYRCC	1 cut(s)	404
BsiHKAI	GWGCWC	3 cut(s)	360, 943, 1281
BsiSI	CCGG	7 cut(s)	289, 300, 381, 554, 717, 958, 1793
BslFI	GGGAC	6 cut(s)	70, 126, 165, 174, 734, 1428
BslI	CCNNNNNNNGG	3 cut(s)	31, 1328, 2006
BsmAI	GTCTC	6 cut(s)	23, 582, 820, 1241, 1563, 1974
BsmBI	CGTCTC	1 cut(s)	1974
BsmFI	GGGAC	6 cut(s)	70, 126, 165, 174, 734, 1428
BsmI	GAATGC	3 cut(s)	662, 729, 1429
BsnI	GGCC	4 cut(s)	303, 380, 1409, 1447
Bso31I	GGTCTC	1 cut(s)	1241
Bsp1286I	GDGCHC	7 cut(s)	360, 399, 488, 911, 943, 1281, 1398
Bsp13I	TCCGGA	1 cut(s)	1792
Bsp1720I	GCTNAGC	1 cut(s)	172
Bsp19I	CCATGG	2 cut(s)	462, 724
BspANI	GGCC	4 cut(s)	303, 380, 1409, 1447
BspCNI	CTCAG	7 cut(s)	130, 185, 1201, 1222, 1411, 1760, 1993
BspEI	TCCGGA	1 cut(s)	1792
BspFNI	CGCG	2 cut(s)	337, 1544
BspHI	TCATGA	1 cut(s)	997
BspLI	GGNNCC	8 cut(s)	36, 180, 181, 406, 722, 908, 1416, 1605
BspMAI	CTGCAG	2 cut(s)	1374, 1612
BspMI	ACCTGC	2 cut(s)	970, 1801
BspOI	GCTAGC	1 cut(s)	839
BspPI	GGATC	6 cut(s)	270, 806, 1058, 1784, 1839, 1919
BspT107I	GGYRCC	1 cut(s)	404
BspTNI	GGTCTC	1 cut(s)	1241
BsrFI	RCCGGY	3 cut(s)	299, 380, 553
BsrI	ACTGG	6 cut(s)	186, 488, 784, 1171, 1462, 1788
BssAI	RCCGGY	3 cut(s)	299, 380, 553
BssECI	CCNNGG	8 cut(s)	145, 462, 624, 717, 724, 744, 1410, 1827
BssNAI	GTATAC	1 cut(s)	1957
BssNI	GRCGYC	1 cut(s)	1026
BssT1I	CCWWGG	3 cut(s)	462, 724, 744
Bst1107I	GTATAC	1 cut(s)	1957
Bst2UI	CCWGG	4 cut(s)	1323, 1411, 1682, 1828
Bst4CI	ACNGT	8 cut(s)	17, 628, 794, 800, 1527, 1557, 1732, 1846
Bst6I	CTCTTC	1 cut(s)	1044
BstACI	GRCGYC	1 cut(s)	1026
BstAPI	GCANNNNNTGC	2 cut(s)	1571, 1992
BstBAI	YACGTR	1 cut(s)	374
BstDEI	CTNAG	8 cut(s)	117, 172, 1054, 1209, 1230, 1419, 1747, 2001
BstDSI	CCRYGG	4 cut(s)	145, 462, 624, 724
BstF5I	GGATG	5 cut(s)	297, 557, 1032, 1311, 1690
BstFNI	CGCG	2 cut(s)	337, 1544
BstHHI	GCGC	2 cut(s)	249, 337
BstMAI	GTCTC	6 cut(s)	23, 582, 820, 1241, 1563, 1974
BstNI	CCWGG	4 cut(s)	1323, 1411, 1682, 1828
BstNSI	RCATGY	1 cut(s)	2029
BstPAI	GACNNNNGTC	1 cut(s)	15
BstSCI	CCNGG	6 cut(s)	716, 957, 1321, 1409, 1680, 1826
BstSFI	CTRYAG	4 cut(s)	570, 1370, 1608, 1845
BstSLI	GKGCMC	1 cut(s)	1398
BstUI	CGCG	2 cut(s)	337, 1544
BstV1I	GCAGC	7 cut(s)	315, 374, 455, 754, 1366, 1655, 1975
BstX2I	RGATCY	2 cut(s)	1050, 2047
BstXI	CCANNNNNNTGG	1 cut(s)	745
BstYI	RGATCY	2 cut(s)	1050, 2047
BstZ17I	GTATAC	1 cut(s)	1957
BsuI	GTATCC	2 cut(s)	1296, 1329
BsuRI	GGCC	4 cut(s)	303, 380, 1409, 1447
BtgI	CCRYGG	4 cut(s)	145, 462, 624, 724
BtsCI	GGATG	5 cut(s)	297, 557, 1032, 1311, 1690
BtsI	GCAGTG	3 cut(s)	159, 630, 738
BtsIMutI	CAGTG	7 cut(s)	159, 630, 738, 777, 1113, 1346, 1781
BveI	ACCTGC	2 cut(s)	970, 1801
CaiI	CAGNNNCTG	2 cut(s)	798, 1369
CciI	TCATGA	1 cut(s)	997
CfoI	GCGC	2 cut(s)	249, 337
Cfr10I	RCCGGY	3 cut(s)	299, 380, 553
Cfr13I	GGNCC	6 cut(s)	34, 179, 721, 1407, 1415, 1751
CseI	GACGC	2 cut(s)	1034, 1509
Csp6I	GTAC	5 cut(s)	451, 1206, 1553, 1663, 1690
CviQI	GTAC	5 cut(s)	451, 1206, 1553, 1663, 1690
DdeI	CTNAG	8 cut(s)	117, 172, 1054, 1209, 1230, 1419, 1747, 2001
DraI	TTTAAA	1 cut(s)	1818
EaeI	YGGCCR	1 cut(s)	1445
Eam1104I	CTCTTC	1 cut(s)	1044
EarI	CTCTTC	1 cut(s)	1044
EciI	GGCGGA	2 cut(s)	11, 296
Ecl136II	GAGCTC	2 cut(s)	941, 1279
Eco130I	CCWWGG	3 cut(s)	462, 724, 744
Eco24I	GRGCYC	5 cut(s)	399, 488, 911, 943, 1281
Eco31I	GGTCTC	1 cut(s)	1241
Eco47I	GGWCC	5 cut(s)	34, 179, 721, 1415, 1751
Eco53kI	GAGCTC	2 cut(s)	941, 1279
Eco57I	CTGAAG	3 cut(s)	837, 1733, 2064
Eco72I	CACGTG	1 cut(s)	374
EcoICRI	GAGCTC	2 cut(s)	941, 1279
EcoO109I	RGGNCCY	2 cut(s)	179, 1415
EcoRII	CCWGG	4 cut(s)	1321, 1409, 1680, 1826
EcoT14I	CCWWGG	3 cut(s)	462, 724, 744
EcoT22I	ATGCAT	2 cut(s)	693, 2031
EcoT38I	GRGCYC	5 cut(s)	399, 488, 911, 943, 1281
ErhI	CCWWGG	3 cut(s)	462, 724, 744
Esp3I	CGTCTC	1 cut(s)	1974
FaqI	GGGAC	6 cut(s)	70, 126, 165, 174, 734, 1428
FauI	CCCGC	2 cut(s)	143, 169
FbaI	TGATCA	2 cut(s)	679, 1537
FblI	GTMKAC	1 cut(s)	1956
FokI	GGATG	5 cut(s)	304, 544, 1019, 1318, 1697
FriOI	GRGCYC	5 cut(s)	399, 488, 911, 943, 1281
FspBI	CTAG	6 cut(s)	285, 836, 1635, 1764, 1976, 2051
GlaI	GCGC	2 cut(s)	248, 336
GsaI	CCCAGC	4 cut(s)	127, 133, 388, 1431
GsuI	CTGGAG	1 cut(s)	925
HaeIII	GGCC	4 cut(s)	303, 380, 1409, 1447
HapII	CCGG	7 cut(s)	289, 300, 381, 554, 717, 958, 1793
HgaI	GACGC	2 cut(s)	1034, 1509
HhaI	GCGC	2 cut(s)	249, 337
Hin1I	GRCGYC	1 cut(s)	1026
Hin6I	GCGC	2 cut(s)	247, 335
HinP1I	GCGC	2 cut(s)	247, 335
HindIII	AAGCTT	1 cut(s)	254
HinfI	GANTC	3 cut(s)	566, 1016, 1366
HpaII	CCGG	7 cut(s)	289, 300, 381, 554, 717, 958, 1793
Hpy166II	GTNNAC	5 cut(s)	1227, 1472, 1553, 1754, 1957
Hpy188I	TCNGA	4 cut(s)	58, 855, 1300, 1713
Hpy8I	GTNNAC	5 cut(s)	1227, 1472, 1553, 1754, 1957
Hpy99I	CGWCG	6 cut(s)	11, 14, 276, 395, 404, 1732
HpyCH4III	ACNGT	8 cut(s)	17, 628, 794, 800, 1527, 1557, 1732, 1846
HpyCH4IV	ACGT	2 cut(s)	373, 1474
HpyF3I	CTNAG	8 cut(s)	117, 172, 1054, 1209, 1230, 1419, 1747, 2001
HpySE526I	ACGT	2 cut(s)	373, 1474
Hsp92I	GRCGYC	1 cut(s)	1026
HspAI	GCGC	2 cut(s)	247, 335
KflI	GGGWCCC	1 cut(s)	179
Kpn2I	TCCGGA	1 cut(s)	1792
KroI	GCCGGC	2 cut(s)	299, 380
KroNI	GCCGGC	2 cut(s)	301, 382
Ksp22I	TGATCA	2 cut(s)	679, 1537
LmnI	GCTCC	6 cut(s)	59, 244, 832, 906, 1265, 1276
Lsp1109I	GCAGC	7 cut(s)	315, 374, 455, 754, 1366, 1655, 1975
LweI	GCATC	4 cut(s)	282, 566, 700, 1277
MaeI	CTAG	6 cut(s)	285, 836, 1635, 1764, 1976, 2051
MaeII	ACGT	2 cut(s)	373, 1474
MaeIII	GTNAC	7 cut(s)	549, 628, 794, 932, 1022, 1527, 1934
MboII	GAAGA	5 cut(s)	1020, 1031, 1173, 1726, 2057
MflI	RGATCY	2 cut(s)	1050, 2047
MhlI	GDGCHC	7 cut(s)	360, 399, 488, 911, 943, 1281, 1398
MlyI	GAGTC	2 cut(s)	1025, 1375
MmeI	TCCRAC	1 cut(s)	121
Mph1103I	ATGCAT	2 cut(s)	693, 2031
MroI	TCCGGA	1 cut(s)	1792
MroNI	GCCGGC	2 cut(s)	299, 380
MseI	TTAA	6 cut(s)	948, 966, 1592, 1817, 2019, 2062
MslI	CAYNNNNRTG	4 cut(s)	467, 1002, 1518, 1867
MspA1I	CMGCKG	3 cut(s)	176, 328, 446
MspI	CCGG	7 cut(s)	289, 300, 381, 554, 717, 958, 1793
MspR9I	CCNGG	6 cut(s)	718, 959, 1323, 1411, 1682, 1828
Mva1269I	GAATGC	3 cut(s)	662, 729, 1429
MvaI	CCWGG	4 cut(s)	1323, 1411, 1682, 1828
MvnI	CGCG	2 cut(s)	337, 1544
NaeI	GCCGGC	2 cut(s)	301, 382
NciI	CCSGG	2 cut(s)	718, 959
NcoI	CCATGG	2 cut(s)	462, 724
NgoMIV	GCCGGC	2 cut(s)	299, 380
NheI	GCTAGC	1 cut(s)	835
NlaIV	GGNNCC	8 cut(s)	36, 180, 181, 406, 722, 908, 1416, 1605
NmeAIII	GCCGAG	2 cut(s)	1423, 1672
NmuCI	GTSAC	5 cut(s)	549, 628, 1022, 1527, 1934
NsiI	ATGCAT	2 cut(s)	693, 2031
NspI	RCATGY	1 cut(s)	2029
PaeI	GCATGC	1 cut(s)	2029
PagI	TCATGA	1 cut(s)	997
PcsI	WCGNNNNNNNCGW	2 cut(s)	271, 396
PctI	GAATGC	3 cut(s)	662, 729, 1429
PdiI	GCCGGC	2 cut(s)	301, 382
PfeI	GAWTC	1 cut(s)	566
PflMI	CCANNNNNTGG	1 cut(s)	31
PfoI	TCCNGGA	1 cut(s)	957
PleI	GAGTC	2 cut(s)	1024, 1374
PmaCI	CACGTG	1 cut(s)	374
PmlI	CACGTG	1 cut(s)	374
PpsI	GAGTC	2 cut(s)	1024, 1374
Ppu21I	YACGTR	1 cut(s)	374
PpuMI	RGGWCCY	2 cut(s)	179, 1415
PshAI	GACNNNNGTC	1 cut(s)	15
PshBI	ATTAAT	1 cut(s)	1592
Psp124BI	GAGCTC	2 cut(s)	943, 1281
Psp5II	RGGWCCY	2 cut(s)	179, 1415
Psp6I	CCWGG	4 cut(s)	1321, 1409, 1680, 1826
PspCI	CACGTG	1 cut(s)	374
PspFI	CCCAGC	4 cut(s)	123, 129, 384, 1427
PspGI	CCWGG	4 cut(s)	1321, 1409, 1680, 1826
PspN4I	GGNNCC	8 cut(s)	36, 180, 181, 406, 722, 908, 1416, 1605
PspPI	GGNCC	6 cut(s)	34, 179, 721, 1407, 1415, 1751
PspPPI	RGGWCCY	2 cut(s)	179, 1415
PstI	CTGCAG	2 cut(s)	1374, 1612
PstNI	CAGNNNCTG	2 cut(s)	798, 1369
PsuI	RGATCY	2 cut(s)	1050, 2047
RsaI	GTAC	5 cut(s)	452, 1207, 1554, 1664, 1691
RsaNI	GTAC	5 cut(s)	451, 1206, 1553, 1663, 1690
RseI	CAYNNNNRTG	4 cut(s)	467, 1002, 1518, 1867
SacI	GAGCTC	2 cut(s)	943, 1281
SaqAI	TTAA	6 cut(s)	948, 966, 1592, 1817, 2019, 2062
Sau96I	GGNCC	6 cut(s)	34, 179, 721, 1407, 1415, 1751
SchI	GAGTC	2 cut(s)	1025, 1375
ScrFI	CCNGG	6 cut(s)	718, 959, 1323, 1411, 1682, 1828
SduI	GDGCHC	7 cut(s)	360, 399, 488, 911, 943, 1281, 1398
SfaNI	GCATC	4 cut(s)	282, 566, 700, 1277
SfcI	CTRYAG	4 cut(s)	570, 1370, 1608, 1845
SinI	GGWCC	5 cut(s)	34, 179, 721, 1415, 1751
SmiMI	CAYNNNNRTG	4 cut(s)	467, 1002, 1518, 1867
SmlI	CTYRAG	1 cut(s)	1280
SmoI	CTYRAG	1 cut(s)	1280
SphI	GCATGC	1 cut(s)	2029
SspMI	CTAG	6 cut(s)	285, 836, 1635, 1764, 1976, 2051
SstI	GAGCTC	2 cut(s)	943, 1281
StyD4I	CCNGG	6 cut(s)	716, 957, 1321, 1409, 1680, 1826
StyI	CCWWGG	3 cut(s)	462, 724, 744
TaaI	ACNGT	8 cut(s)	17, 628, 794, 800, 1527, 1557, 1732, 1846
TaiI	ACGT	2 cut(s)	376, 1477
TaqI	TCGA	7 cut(s)	259, 274, 393, 897, 1096, 1173, 1834
TatI	WGTACW	1 cut(s)	1552
TauI	GCSGC	4 cut(s)	158, 167, 449, 638
TfiI	GAWTC	1 cut(s)	566
Tru1I	TTAA	6 cut(s)	948, 966, 1592, 1817, 2019, 2062
Tru9I	TTAA	6 cut(s)	948, 966, 1592, 1817, 2019, 2062
TscAI	CASTG	7 cut(s)	166, 637, 745, 784, 1120, 1346, 1788
TseFI	GTSAC	5 cut(s)	549, 628, 1022, 1527, 1934
TseI	GCWGC	7 cut(s)	328, 362, 443, 767, 1379, 1643, 1963
Tsp45I	GTSAC	5 cut(s)	549, 628, 1022, 1527, 1934
TspGWI	ACGGA	2 cut(s)	260, 640
TspRI	CASTG	7 cut(s)	166, 637, 745, 784, 1120, 1346, 1788
Van91I	CCANNNNNTGG	1 cut(s)	31
VpaK11BI	GGWCC	5 cut(s)	34, 179, 721, 1415, 1751
VspI	ATTAAT	1 cut(s)	1592
XapI	RAATTY	1 cut(s)	1819
XceI	RCATGY	1 cut(s)	2029
XcmI	CCANNNNNNNNNTGG	1 cut(s)	742
XmiI	GTMKAC	1 cut(s)	1956
XspI	CTAG	6 cut(s)	285, 836, 1635, 1764, 1976, 2051
Zsp2I	ATGCAT	2 cut(s)	693, 2031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.