Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0005759

Physical Location & Seq

Genomic Coordinates Reverse (-)

29982210 .. 29989379

Gene Structure 7170 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G024410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGAACGACGAGAGCCTCCGGCAGGATTTGGACCCCCAAAGCGATCAGAGCTCCGATTACCTCCCACCTCAGCCCCACCACCCTCTCCCTTCCCAACCCCAACCCCACCCCCAGCCTCGCCGCCCACGTGGCTTCGCCGCCACTGCCGCAGCCGGCTCGGTGGGCCCCGTCTCTCCCTCCTCCACCAAGGGGGGAAGGAGAGAGAGGGAGAAGGAGAAGGAGCGGACGAAGCTCCGAGAACGCCTCCGCCGATCAATCACCAGCCGCATGCTCGCCGGACTCCGCCAGTACGGCAATTTCCCCCTGCCTGCGCGCGCAGACATGAACGATGTGCTCGCAGCTCTGGCGCGTGAGGCCGGCTGGGTCGTCGAGGCTGACGGCACCACTTATCGCCAGTCTCCACCTCAAATTGGAGGAGCGTATTCGATGAGCTTGAGGTCAGTGGAGACTCCAGTGTCAGGTGTGAAAGCAGCGTTGGAGTGTCATCCATCATCAGTGGTTAGAATTGATGAGAGTTTGTCTCCGGCTTCGCTTGATTCTGTTGTGATTGGGGAGAAGAATGAGAAGTTTTCGAATAGTAGTCCTGCCATGAACTCTGTAAATTGCTTAGAGACTGATCAGCTCATGCAGCACATTCCTTCTGCCGCAGGGTTTGCACCTGCCCCATACGTCCCTCTCTATGTGACACTTGCAACTGGTTTCGTCAACAATTACTGCCAGTTGGTTGATCCTGAAGGGTTAAGACAGGAGCTGACTCATATGCAATCGCTAAATGCGGATGGTGTTGTTGTGGATTGTTGGTGGGGTATTGTTGAATGCTGGAGCCCCCAGAAATACGATTGGTCCGGTTATAGGGGTCTATTTAACATTGTACGCGAGTTCAAGCTAAAATTACAGGTTGTAATGGCATTTCATGAGTATGGAAGAAGCGAGTCTGGTGAAGCCCTTATTCCTCTTCCGAAGTGGATTTTAGACATTGGTAAAGAAAACCAGGACATATTCTTTACAGATCGAGAAGGAAGGAGGAATACTGAATGTCTATCCTGGGGCGTCGACAAAGAGAGAGTTTTGCATGGAAGAACTGGTGTTGAGGTCTATTTTGATTTCATGAGAAGTTTCCGTACCGAGTTTGATGACTTGTTTGGTGAGGGTCTTATTTCTGCTGTGGAGATTGGACTCGGAGCTTCTGGGGAGCTAAAGTATCCTTCCTTTTCAGAAAGGATGGGATGGAGATATCCTGGTATCGGCGAGTTTCAGTGTTATGATAGATACCTACAACAAAGTCTGCATAAAGCAGCAAAATTGCGTGGGCACTCATTCTGGGCTAGAGGACCAGATAATGCTGGTGAATACAATTCTCGGCCACATGAAACTGGCTTCTTCTGTGAGCGTGGTGATTATGATAGTTACTATGGACGCTTTTTCCTTCATTGGTATGCCAAGACACTAATTGACCATGCAGATAATGTCCTATCTCTTGCAAGCCTTGCCTTTGATGAAACAAAAGTAATTGTCAAGGTTCCTGCTGTTTATTGGTGGTACAAAACACCTAGCCATGCAGCAGAGCTAACTTCTGGGTACTATAATCCTAGAAACCAAGATGGGTACTCTCCAGTGTTTGAAGTTCTGAAGAAACATTCAGTGATGGTTAAGTTTGTTTGCTCGGCACCAAATGATGGTGATGAAGCATTGGGTGATCCAGAAGGTTTGAGTTGGCAGGTTTTAAATTTAGCTTGGGATAGAGGATTGACTGTGGCTGGGGAAAATGCACTGTCATGCTATGATAGAGAAGGGTGCATGAGAATTGTTGAAATGGTGAAGCCAAGAAATGATCCTGATCGCCACCATTTCACATTCTTTGTATATCAGCAACCATCTCCTCTAGTTCAAGGGACAATTTGCTTTTCGGAGTTGGACTTTTTCATCAAGTGCATGCATGGTGACATGGCTGGGAATATAGTGTCGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

BES1_N Glyco_hydro_14

Protein Analysis

656

Amino Acids

73.86

Weight (kDa)

5.76

Isoelectric Point (pI)

49.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	64 - 203	9.7e-45	BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14	PF01373	240 - 613	3.6e-97	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45300 AT5G45300 AT5G45300
fragaria_vesca	FvH4_5g24520 FvH4_5g24520 FvH4_5g24520 FvH4_5g24520 FvH4_5g24520
malus_domestica	MD06G1012600.v1.1
prunus_persica	Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1
pyrus_communis	pycom06g01050
rosa_chinensis	RchiOBHm_Chr7g0215001
rosa_laevigata	RLG00000002702
rosa_multiflora	Rmu_co8013204.1_g000001 Rmu_sc0004525.1_g000013 Rmu_ssc0000134.1_g000045
rosa_roxburghii	Rroxscaffold_3G00244800
rosa_rugosa	Rorug07G0149100
rosa_samantha	Rh7AG286200 Rh7BG277900 Rh7CG305300 Rh7CG305400 Rh7DG289500
rosa_wichuraiana	Rw7G024410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	667
AasI	GACNNNNNNGTC	1 cut(s)	454
Acc36I	ACCTGC	2 cut(s)	667, 1708
AccB1I	GGYRCC	2 cut(s)	380, 1666
AccB7I	CCANNNNNTGG	1 cut(s)	1676
AccBSI	CCGCTC	1 cut(s)	223
AccI	GTMKAC	1 cut(s)	1053
AccII	CGCG	4 cut(s)	313, 315, 349, 876
AciI	CCGC	9 cut(s)	121, 138, 147, 223, 247, 265, 283, 645, 776
AclWI	GGATC	3 cut(s)	722, 1691, 1826
AcoI	YGGCCR	1 cut(s)	1361
AcsI	RAATTY	1 cut(s)	1726
AcuI	CTGAAG	2 cut(s)	753, 1649
AcvI	CACGTG	1 cut(s)	128
AcyI	GRCGYC	1 cut(s)	1050
AfaI	GTAC	6 cut(s)	290, 873, 1123, 1541, 1580, 1607
AfiI	CCNNNNNNNGG	7 cut(s)	22, 189, 410, 458, 852, 1244, 1676
AgsI	TTSAA	5 cut(s)	815, 883, 1622, 1811, 1889
AjnI	CCWGG	3 cut(s)	990, 1043, 1237
AjuI	GAANNNNNNNTTGG	2 cut(s)	458, 490
Alw21I	GWGCWC	2 cut(s)	53, 336
Alw26I	GTCTC	5 cut(s)	175, 402, 440, 525, 605
AlwI	GGATC	3 cut(s)	722, 1691, 1826
AlwNI	CAGNNNCTG	1 cut(s)	751
AoxI	GGCC	3 cut(s)	163, 354, 1361
ApaI	GGGCCC	1 cut(s)	167
ApeKI	GCWGC	6 cut(s)	149, 338, 470, 628, 1295, 1559
ApoI	RAATTY	1 cut(s)	1726
AspLEI	GCGC	4 cut(s)	313, 315, 317, 349
AspS9I	GGNCC	5 cut(s)	31, 163, 164, 843, 1331
AsuHPI	GGTGA	9 cut(s)	250, 950, 1157, 1358, 1406, 1691, 1706, 1828, 1952
AsuII	TTCGAA	1 cut(s)	572
AvaII	GGWCC	3 cut(s)	31, 843, 1331
BaeGI	GKGCMC	2 cut(s)	167, 1314
BanI	GGYRCC	2 cut(s)	380, 1666
BanII	GRGCYC	3 cut(s)	53, 167, 827
BarI	GAAGNNNNNNTAC	4 cut(s)	1012, 1044, 1105, 1137
BbrPI	CACGTG	1 cut(s)	128
Bbv12I	GWGCWC	2 cut(s)	53, 336
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	6 cut(s)	161, 350, 482, 640, 1307, 1571
BccI	CCATC	8 cut(s)	496, 773, 1216, 1221, 1595, 1639, 1670, 1882
BceAI	ACGGC	2 cut(s)	307, 394
BcgI	CGANNNNNNTGC	2 cut(s)	138, 172
BciT130I	CCWGG	3 cut(s)	992, 1045, 1239
BciVI	GTATCC	1 cut(s)	1212
BclI	TGATCA	1 cut(s)	616
BcoDI	GTCTC	5 cut(s)	175, 402, 440, 525, 605
BfaI	CTAG	4 cut(s)	1326, 1551, 1590, 1883
BfuAI	ACCTGC	2 cut(s)	667, 1708
BfuI	GTATCC	1 cut(s)	1212
BglI	GCCNNNNNGGC	2 cut(s)	129, 291
Bme1390I	CCNGG	3 cut(s)	992, 1045, 1239
Bme18I	GGWCC	3 cut(s)	31, 843, 1331
BmgT120I	GGNCC	5 cut(s)	31, 163, 164, 843, 1331
BmiI	GGNNCC	7 cut(s)	33, 165, 166, 382, 824, 1521, 1668
BmrFI	CCNGG	3 cut(s)	992, 1045, 1239
BplI	GAGNNNNNCTC	4 cut(s)	228, 260, 505, 537
BpmI	CTGGAG	3 cut(s)	435, 841, 1596
Bpu10I	CCTNAGC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	572
BpuEI	CTTGAG	1 cut(s)	454
BsaAI	YACGTR	1 cut(s)	128
BsaBI	GATNNNNATC	1 cut(s)	1836
BsaHI	GRCGYC	1 cut(s)	1050
BsaJI	CCNNGG	2 cut(s)	186, 1044
BsaWI	WCCGGW	1 cut(s)	845
BsaXI	ACNNNNNCTCC	2 cut(s)	1184, 1214
Bsc4I	CCNNNNNNNGG	7 cut(s)	22, 189, 410, 458, 852, 1244, 1676
Bse118I	RCCGGY	2 cut(s)	152, 356
Bse1I	ACTGG	8 cut(s)	286, 394, 452, 700, 718, 1087, 1378, 1613
Bse8I	GATNNNNATC	1 cut(s)	1836
BseBI	CCWGG	3 cut(s)	992, 1045, 1239
BseDI	CCNNGG	2 cut(s)	186, 1044
BseGI	GGATG	4 cut(s)	484, 784, 1227, 1232
BseJI	GATNNNNATC	1 cut(s)	1836
BseLI	CCNNNNNNNGG	7 cut(s)	22, 189, 410, 458, 852, 1244, 1676
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	8 cut(s)	286, 394, 452, 700, 718, 1087, 1378, 1613
BsePI	GCGCGC	2 cut(s)	311, 313
BseRI	GAGGAG	3 cut(s)	169, 429, 1869
BseSI	GKGCMC	2 cut(s)	167, 1314
BseXI	GCAGC	6 cut(s)	161, 350, 482, 640, 1307, 1571
BseYI	CCCAGC	4 cut(s)	111, 360, 1757, 1949
Bsh1236I	CGCG	4 cut(s)	313, 315, 349, 876
BshFI	GGCC	3 cut(s)	165, 356, 1363
BshNI	GGYRCC	2 cut(s)	380, 1666
BsiHKAI	GWGCWC	2 cut(s)	53, 336
BsiSI	CCGG	6 cut(s)	19, 153, 276, 357, 524, 846
BslFI	GGGAC	2 cut(s)	656, 1906
BslI	CCNNNNNNNGG	7 cut(s)	22, 189, 410, 458, 852, 1244, 1676
BsmAI	GTCTC	5 cut(s)	175, 402, 440, 525, 605
BsmBI	CGTCTC	1 cut(s)	175
BsmFI	GGGAC	2 cut(s)	656, 1906
BsmI	GAATGC	1 cut(s)	821
BsnI	GGCC	3 cut(s)	165, 356, 1363
Bsp119I	TTCGAA	1 cut(s)	572
Bsp120I	GGGCCC	1 cut(s)	163
Bsp1286I	GDGCHC	5 cut(s)	53, 167, 336, 827, 1314
Bsp143I	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
BspACI	CCGC	9 cut(s)	121, 138, 147, 223, 247, 265, 283, 645, 776
BspANI	GGCC	3 cut(s)	165, 356, 1363
BspCNI	CTCAG	1 cut(s)	82
BspFNI	CGCG	4 cut(s)	313, 315, 349, 876
BspHI	TCATGA	2 cut(s)	913, 1107
BspLI	GGNNCC	7 cut(s)	33, 165, 166, 382, 824, 1521, 1668
BspMI	ACCTGC	2 cut(s)	667, 1708
BspPI	GGATC	3 cut(s)	722, 1691, 1826
BspT104I	TTCGAA	1 cut(s)	572
BspT107I	GGYRCC	2 cut(s)	380, 1666
BsrBI	CCGCTC	1 cut(s)	223
BsrFI	RCCGGY	2 cut(s)	152, 356
BsrI	ACTGG	8 cut(s)	286, 394, 452, 700, 718, 1087, 1378, 1613
BssAI	RCCGGY	2 cut(s)	152, 356
BssECI	CCNNGG	2 cut(s)	186, 1044
BssHII	GCGCGC	2 cut(s)	311, 313
BssMI	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
BssNI	GRCGYC	1 cut(s)	1050
BssT1I	CCWWGG	1 cut(s)	186
Bst2UI	CCWGG	3 cut(s)	992, 1045, 1239
Bst4CI	ACNGT	2 cut(s)	1753, 1773
Bst6I	CTCTTC	1 cut(s)	960
BstACI	GRCGYC	1 cut(s)	1050
BstAPI	GCANNNNNTGC	2 cut(s)	653, 1487
BstBAI	YACGTR	1 cut(s)	128
BstBI	TTCGAA	1 cut(s)	572
BstDEI	CTNAG	2 cut(s)	69, 607
BstENI	CCTNNNNNAGG	1 cut(s)	20
BstF5I	GGATG	4 cut(s)	484, 784, 1227, 1232
BstFNI	CGCG	4 cut(s)	313, 315, 349, 876
BstHHI	GCGC	4 cut(s)	313, 315, 317, 349
BstKTI	GATC	8 cut(s)	46, 254, 619, 730, 1012, 1699, 1834, 1840
BstMAI	GTCTC	5 cut(s)	175, 402, 440, 525, 605
BstMBI	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
BstNI	CCWGG	3 cut(s)	992, 1045, 1239
BstNSI	RCATGY	2 cut(s)	271, 1936
BstSCI	CCNGG	3 cut(s)	990, 1043, 1237
BstSLI	GKGCMC	2 cut(s)	167, 1314
BstUI	CGCG	4 cut(s)	313, 315, 349, 876
BstV1I	GCAGC	6 cut(s)	161, 350, 482, 640, 1307, 1571
BsuI	GTATCC	1 cut(s)	1212
BsuRI	GGCC	3 cut(s)	165, 356, 1363
BtsCI	GGATG	4 cut(s)	484, 784, 1227, 1232
BtsI	GCAGTG	1 cut(s)	141
BtsIMutI	CAGTG	8 cut(s)	141, 447, 459, 501, 1262, 1620, 1647, 1769
BveI	ACCTGC	2 cut(s)	667, 1708
CaiI	CAGNNNCTG	1 cut(s)	751
CciI	TCATGA	2 cut(s)	913, 1107
CfoI	GCGC	4 cut(s)	313, 315, 317, 349
Cfr10I	RCCGGY	2 cut(s)	152, 356
Cfr13I	GGNCC	5 cut(s)	31, 163, 164, 843, 1331
CseI	GACGC	2 cut(s)	1039, 1425
Csp6I	GTAC	6 cut(s)	289, 872, 1122, 1540, 1579, 1606
CviQI	GTAC	6 cut(s)	289, 872, 1122, 1540, 1579, 1606
DdeI	CTNAG	2 cut(s)	69, 607
DpnI	GATC	8 cut(s)	45, 253, 618, 729, 1011, 1698, 1833, 1839
DpnII	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
DraI	TTTAAA	1 cut(s)	1725
DrdI	GACNNNNNNGTC	1 cut(s)	454
DseDI	GACNNNNNNGTC	1 cut(s)	454
EaeI	YGGCCR	1 cut(s)	1361
Eam1104I	CTCTTC	1 cut(s)	960
EarI	CTCTTC	1 cut(s)	960
EciI	GGCGGA	2 cut(s)	236, 272
Ecl136II	GAGCTC	1 cut(s)	51
Eco130I	CCWWGG	1 cut(s)	186
Eco24I	GRGCYC	3 cut(s)	53, 167, 827
Eco32I	GATATC	1 cut(s)	1235
Eco47I	GGWCC	3 cut(s)	31, 843, 1331
Eco53kI	GAGCTC	1 cut(s)	51
Eco57I	CTGAAG	2 cut(s)	753, 1649
Eco72I	CACGTG	1 cut(s)	128
EcoICRI	GAGCTC	1 cut(s)	51
EcoNI	CCTNNNNNAGG	1 cut(s)	20
EcoO109I	RGGNCCY	1 cut(s)	164
EcoRII	CCWGG	3 cut(s)	990, 1043, 1237
EcoRV	GATATC	1 cut(s)	1235
EcoT14I	CCWWGG	1 cut(s)	186
EcoT22I	ATGCAT	1 cut(s)	1938
EcoT38I	GRGCYC	3 cut(s)	53, 167, 827
ErhI	CCWWGG	1 cut(s)	186
Esp3I	CGTCTC	1 cut(s)	175
FaqI	GGGAC	2 cut(s)	656, 1906
FauNDI	CATATG	1 cut(s)	759
FbaI	TGATCA	1 cut(s)	616
FblI	GTMKAC	1 cut(s)	1053
FokI	GGATG	4 cut(s)	471, 791, 1234, 1239
FriOI	GRGCYC	3 cut(s)	53, 167, 827
FspBI	CTAG	4 cut(s)	1326, 1551, 1590, 1883
GlaI	GCGC	4 cut(s)	312, 314, 316, 348
GsaI	CCCAGC	4 cut(s)	115, 364, 1761, 1953
GsuI	CTGGAG	3 cut(s)	435, 841, 1596
HaeIII	GGCC	3 cut(s)	165, 356, 1363
HapII	CCGG	6 cut(s)	19, 153, 276, 357, 524, 846
HgaI	GACGC	2 cut(s)	1039, 1425
HhaI	GCGC	4 cut(s)	313, 315, 317, 349
Hin1I	GRCGYC	1 cut(s)	1050
Hin6I	GCGC	4 cut(s)	311, 313, 315, 347
HinP1I	GCGC	4 cut(s)	311, 313, 315, 347
HincII	GTYRAC	2 cut(s)	706, 1054
HindII	GTYRAC	2 cut(s)	706, 1054
HinfI	GANTC	6 cut(s)	279, 448, 536, 754, 932, 1176
HpaII	CCGG	6 cut(s)	19, 153, 276, 357, 524, 846
HphI	GGTGA	9 cut(s)	250, 950, 1157, 1358, 1406, 1691, 1706, 1828, 1952
Hpy166II	GTNNAC	2 cut(s)	706, 1054
Hpy188I	TCNGA	8 cut(s)	48, 55, 236, 960, 1181, 1216, 1629, 1909
Hpy188III	TCNNGA	6 cut(s)	731, 914, 1013, 1108, 1700, 1835
Hpy8I	GTNNAC	2 cut(s)	706, 1054
Hpy99I	CGWCG	3 cut(s)	11, 371, 1055
HpyCH4III	ACNGT	2 cut(s)	1753, 1773
HpyCH4IV	ACGT	2 cut(s)	127, 669
HpyF3I	CTNAG	2 cut(s)	69, 607
HpySE526I	ACGT	2 cut(s)	127, 669
Hsp92I	GRCGYC	1 cut(s)	1050
HspAI	GCGC	4 cut(s)	311, 313, 315, 347
KroI	GCCGGC	2 cut(s)	152, 356
KroNI	GCCGGC	2 cut(s)	154, 358
Ksp22I	TGATCA	1 cut(s)	616
Kzo9I	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
LmnI	GCTCC	8 cut(s)	56, 220, 237, 416, 748, 822, 1181, 1192
Lsp1109I	GCAGC	6 cut(s)	161, 350, 482, 640, 1307, 1571
MaeI	CTAG	4 cut(s)	1326, 1551, 1590, 1883
MaeII	ACGT	2 cut(s)	127, 669
MaeIII	GTNAC	3 cut(s)	682, 1406, 1940
MalI	GATC	8 cut(s)	45, 253, 618, 729, 1011, 1698, 1833, 1839
MbiI	CCGCTC	1 cut(s)	223
MboI	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
MboII	GAAGA	6 cut(s)	568, 936, 947, 1089, 1372, 1642
MhlI	GDGCHC	5 cut(s)	53, 167, 336, 827, 1314
MlyI	GAGTC	5 cut(s)	273, 442, 748, 941, 1170
MmeI	TCCRAC	2 cut(s)	456, 1893
Mph1103I	ATGCAT	1 cut(s)	1938
MroNI	GCCGGC	2 cut(s)	152, 356
MseI	TTAA	4 cut(s)	740, 864, 1650, 1724
MslI	CAYNNNNRTG	3 cut(s)	918, 1434, 1774
MspI	CCGG	6 cut(s)	19, 153, 276, 357, 524, 846
MspR9I	CCNGG	3 cut(s)	992, 1045, 1239
Mva1269I	GAATGC	1 cut(s)	821
MvaI	CCWGG	3 cut(s)	992, 1045, 1239
MvnI	CGCG	4 cut(s)	313, 315, 349, 876
NaeI	GCCGGC	2 cut(s)	154, 358
NdeI	CATATG	1 cut(s)	759
NdeII	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
NgoMIV	GCCGGC	2 cut(s)	152, 356
NlaIV	GGNNCC	7 cut(s)	33, 165, 166, 382, 824, 1521, 1668
NmeAIII	GCCGAG	2 cut(s)	1339, 1643
NmuCI	GTSAC	2 cut(s)	682, 1940
NsiI	ATGCAT	1 cut(s)	1938
NspI	RCATGY	2 cut(s)	271, 1936
NspV	TTCGAA	1 cut(s)	572
PaeI	GCATGC	2 cut(s)	271, 1936
PagI	TCATGA	2 cut(s)	913, 1107
PaqCI	CACCTGC	1 cut(s)	667
PauI	GCGCGC	2 cut(s)	311, 313
PcsI	WCGNNNNNNNCGW	2 cut(s)	124, 247
PctI	GAATGC	1 cut(s)	821
PdiI	GCCGGC	2 cut(s)	154, 358
PfeI	GAWTC	1 cut(s)	536
PflMI	CCANNNNNTGG	1 cut(s)	1676
PleI	GAGTC	5 cut(s)	273, 442, 748, 940, 1170
PmaCI	CACGTG	1 cut(s)	128
PmlI	CACGTG	1 cut(s)	128
PpsI	GAGTC	5 cut(s)	273, 442, 748, 940, 1170
Ppu21I	YACGTR	1 cut(s)	128
Psp124BI	GAGCTC	1 cut(s)	53
Psp6I	CCWGG	3 cut(s)	990, 1043, 1237
PspCI	CACGTG	1 cut(s)	128
PspFI	CCCAGC	4 cut(s)	111, 360, 1757, 1949
PspGI	CCWGG	3 cut(s)	990, 1043, 1237
PspN4I	GGNNCC	7 cut(s)	33, 165, 166, 382, 824, 1521, 1668
PspOMI	GGGCCC	1 cut(s)	163
PspPI	GGNCC	5 cut(s)	31, 163, 164, 843, 1331
PstNI	CAGNNNCTG	1 cut(s)	751
PteI	GCGCGC	2 cut(s)	311, 313
RsaI	GTAC	6 cut(s)	290, 873, 1123, 1541, 1580, 1607
RsaNI	GTAC	6 cut(s)	289, 872, 1122, 1540, 1579, 1606
RseI	CAYNNNNRTG	3 cut(s)	918, 1434, 1774
SacI	GAGCTC	1 cut(s)	53
SalI	GTCGAC	1 cut(s)	1052
SaqAI	TTAA	4 cut(s)	740, 864, 1650, 1724
Sau3AI	GATC	8 cut(s)	43, 251, 616, 727, 1009, 1696, 1831, 1837
Sau96I	GGNCC	5 cut(s)	31, 163, 164, 843, 1331
SchI	GAGTC	5 cut(s)	273, 442, 748, 941, 1170
ScrFI	CCNGG	3 cut(s)	992, 1045, 1239
SduI	GDGCHC	5 cut(s)	53, 167, 336, 827, 1314
SfuI	TTCGAA	1 cut(s)	572
SinI	GGWCC	3 cut(s)	31, 843, 1331
SmiMI	CAYNNNNRTG	3 cut(s)	918, 1434, 1774
SmlI	CTYRAG	1 cut(s)	433
SmoI	CTYRAG	1 cut(s)	433
SphI	GCATGC	2 cut(s)	271, 1936
SsiI	CCGC	9 cut(s)	121, 138, 147, 223, 247, 265, 283, 645, 776
SspMI	CTAG	4 cut(s)	1326, 1551, 1590, 1883
SstI	GAGCTC	1 cut(s)	53
StyD4I	CCNGG	3 cut(s)	990, 1043, 1237
StyI	CCWWGG	1 cut(s)	186
TaaI	ACNGT	2 cut(s)	1753, 1773
TaiI	ACGT	2 cut(s)	130, 672
TaqI	TCGA	5 cut(s)	369, 425, 572, 1012, 1053
TauI	GCSGC	5 cut(s)	123, 140, 149, 267, 647
TfiI	GAWTC	1 cut(s)	536
Tru1I	TTAA	4 cut(s)	740, 864, 1650, 1724
Tru9I	TTAA	4 cut(s)	740, 864, 1650, 1724
TscAI	CASTG	8 cut(s)	148, 447, 459, 501, 1262, 1620, 1647, 1776
TseFI	GTSAC	2 cut(s)	682, 1940
TseI	GCWGC	6 cut(s)	149, 338, 470, 628, 1295, 1559
Tsp45I	GTSAC	2 cut(s)	682, 1940
TspGWI	ACGGA	1 cut(s)	1109
TspRI	CASTG	8 cut(s)	148, 447, 459, 501, 1262, 1620, 1647, 1776
Van91I	CCANNNNNTGG	1 cut(s)	1676
VpaK11BI	GGWCC	3 cut(s)	31, 843, 1331
XagI	CCTNNNNNAGG	1 cut(s)	20
XapI	RAATTY	1 cut(s)	1726
XceI	RCATGY	2 cut(s)	271, 1936
XmiI	GTMKAC	1 cut(s)	1053
XspI	CTAG	4 cut(s)	1326, 1551, 1590, 1883
Zsp2I	ATGCAT	1 cut(s)	1938

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.