Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005759

Physical Location & Seq

Genomic Coordinates Reverse (-)

32416593 .. 32424336

Gene Structure 7744 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19237

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGAGGGGCTGTGTTTGCGAACGACAACAGACGCTACAAAACGACATGAACGACGAGAGCCTCCGGCAGGATTTGGACCCCCAAAGCGATCAGAGCTCCGATTACCTCCCACCTCAGCCCCACCACCCTCTCCCTTCCCAACCCCAACCCCCTCGCCGCCCACGTGGCTTCGCCGCCACTGCCGCAGCCGGCTCGGTGGGCCCCGTCTCTCCCTCCTCCACCAAGGGGGAAGGAGAGAGAGGGAGAAGGAGAAGGAGCGGACGAAGCTCCGAGAACGCCTCCGCCGGTCAATCACCAGCCGTATGCTCGCCGGACTCCGCCAGTACGGCAATTTCCCCCTGCCTGCGCGCGCAGACATGAACGATGTGCTCGCAGCTCTGGCGCGTGAGGCCGGCTGGGTCGTCGAGACTGACGGCACCACTTATCGCCAGTCTCCACCTCAAATTGGAGGAGCGTATTCGATGAGCTTGAGGTCAGTGGAGACTCCAGTGTCGGGTGTTAAAGCAGCGTTGGAGTGTCATCCATCATCAGTAGTTAGAATTGATGAGAGTTTATCACCAGCTTCGCTCGATTCTGTTGTGATTGGGGAGAAGAATGAGAAGTTTTCAAATAGTAGTCCTGCCATGAACTCTGTAAATTGCTTAGAGACTGATCAGCTCATGCAGCACATTCCTTCCGCCGCAGGGTTTGCACCTGCCCCGTACGTCCCTCTCTATGTGACACTTGCAACTGGTTTCGTCAACAATTACTGCCAGTTGGTTGATCCTGAGGGGTTAAGACAGGAGCTGACTCATATGCAATCGCTAAATGCGGATGGTGTTGTTGTGGATTGTTGGTGGGGTATTGTTGAATGCTGGAGCCCCCAGAAATATGATTGGTCCGGTTATAGGGGTCTATTTAACATTGTACGCGAGTTCAAGCTAAAATTACAGGTCGTAATGGCATTTCATGAGTATGGAAGAAGCGAGTCCGGTGAAGCCCTTATTCCTCTTCCGAAGTGGATTTTAGACATTGGTAAAGAAAACCAGGACATATTCTTTACAGATCGAGAAGGAAGGAGGAATACTGAATGTCTATCCTGGGGCGTCGACAAAGAGAGAGTTTTGCATGGAAGAACTGGTGTTGAGGTCTATTTTGATTTCATGAGAAGTTTCCGTACCGAGTTTGATGACTTGTTTGGTGAGGGTCTTATTTCTGCTGTGGAGATTGGACTTGGAGCTTCTGGGGAGCTAAAGTATCCTTCCTTTTCGGAAAGGATGGGATGGAGATATCCTGGTATCGGCGAGTTTCAGTGTTATGATAGATACCTACAACAAAGTCTGCATAAAGCAGCAAAATTGCGTGGGCACTCATTCTGGGCTAGAGGACCAGATAATGCTGGTGAATACAATTCTCGGCCACATGAAACTGGCTTCTTCTGTGAGCGTGGTGATTATGATAGTTACTATGGACGCTTTTTCCTTCATTGGTATGCCAAGACACTAATTGACCATGCAGATAATGTCTTATCTCTTGCAAGCCTTGCCTTTGATGAAACAAAAGTAATTGTCAAGGTTCCTGCTGTTTATTGGTGGTACAAAACACCTAGCCATGCAGCAGAGCTAACTTCTGGGTACTATAATCCTAGAAACCAAGATGGCTACTCTCCAGTGTTTGAAGTTCTGAAGAAACATTCAGTGACGGTTAAGTTTGTTTGCTCGGCACCAAATGATGGTGATGAAGCATTGGGTGATCCAGAAGGTTTGAGTTGGCAGGTTTTAAATTTAGCTTGGGATAGAGGATTGACTGTGGCTGGGGAAAATGCACTGTCATGCTATGATAGAGAAGGGTGCATGAGAATTGTTGAAATGGTGAAGCCAAGAAATGATCCTGATCGCCACCATTTCACATTCTTTGTATATCAGCAACCATCTCCTCTAGTTCAAGGGACAATTTGCTTTTCGGAGTTGGACTTTTTCATCAAGTGCATGCATGGTGACATGGCTGGGAATATAGTGTCGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

BES1_N Glyco_hydro_14

Protein Analysis

668

Amino Acids

75.48

Weight (kDa)

6.44

Isoelectric Point (pI)

51.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	76 - 215	1.2e-44	BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14	PF01373	252 - 625	3.4e-97	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45300 AT5G45300 AT5G45300
fragaria_vesca	FvH4_5g24520 FvH4_5g24520 FvH4_5g24520 FvH4_5g24520 FvH4_5g24520
malus_domestica	MD06G1012600.v1.1
prunus_persica	Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1 Prupe.5G013400_v2.0.a1
pyrus_communis	pycom06g01050
rosa_chinensis	RchiOBHm_Chr7g0215001
rosa_laevigata	RLG00000002702
rosa_multiflora	Rmu_co8013204.1_g000001 Rmu_sc0004525.1_g000013 Rmu_ssc0000134.1_g000045
rosa_roxburghii	Rroxscaffold_3G00244800
rosa_rugosa	Rorug07G0149100
rosa_samantha	Rh7AG286200 Rh7BG277900 Rh7CG305300 Rh7CG305400 Rh7DG289500
rosa_wichuraiana	Rw7G024410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	703
AasI	GACNNNNNNGTC	1 cut(s)	490
Acc36I	ACCTGC	2 cut(s)	703, 1744
AccB1I	GGYRCC	2 cut(s)	416, 1702
AccB7I	CCANNNNNTGG	1 cut(s)	1712
AccBSI	CCGCTC	1 cut(s)	259
AccI	GTMKAC	1 cut(s)	1089
AccII	CGCG	4 cut(s)	349, 351, 385, 912
AciI	CCGC	9 cut(s)	158, 175, 184, 259, 283, 319, 678, 681, 812
AclWI	GGATC	3 cut(s)	758, 1727, 1862
AcoI	YGGCCR	1 cut(s)	1397
AcsI	RAATTY	1 cut(s)	1762
AcuI	CTGAAG	1 cut(s)	1685
AcvI	CACGTG	1 cut(s)	165
AcyI	GRCGYC	1 cut(s)	1086
AfaI	GTAC	6 cut(s)	326, 704, 909, 1159, 1577, 1616
AfiI	CCNNNNNNNGG	8 cut(s)	68, 226, 446, 494, 684, 888, 1280, 1712
AgsI	TTSAA	6 cut(s)	609, 851, 919, 1658, 1847, 1925
AjnI	CCWGG	3 cut(s)	1026, 1079, 1273
Alw21I	GWGCWC	2 cut(s)	99, 372
Alw26I	GTCTC	5 cut(s)	212, 401, 438, 476, 641
AlwI	GGATC	3 cut(s)	758, 1727, 1862
AlwNI	CAGNNNCTG	1 cut(s)	787
AoxI	GGCC	3 cut(s)	200, 390, 1397
ApaI	GGGCCC	1 cut(s)	204
ApeKI	GCWGC	6 cut(s)	186, 374, 506, 664, 1331, 1595
ApoI	RAATTY	1 cut(s)	1762
AspLEI	GCGC	4 cut(s)	349, 351, 353, 385
AspS9I	GGNCC	5 cut(s)	77, 200, 201, 879, 1367
AvaII	GGWCC	3 cut(s)	77, 879, 1367
AxyI	CCTNAGG	1 cut(s)	768
BaeGI	GKGCMC	2 cut(s)	204, 1350
BanI	GGYRCC	2 cut(s)	416, 1702
BanII	GRGCYC	3 cut(s)	99, 204, 863
BarI	GAAGNNNNNNTAC	4 cut(s)	1048, 1080, 1141, 1173
BbrPI	CACGTG	1 cut(s)	165
Bbv12I	GWGCWC	2 cut(s)	99, 372
BbvCI	CCTCAGC	1 cut(s)	115
BbvI	GCAGC	6 cut(s)	198, 386, 518, 676, 1343, 1607
BccI	CCATC	7 cut(s)	532, 809, 1252, 1257, 1631, 1706, 1918
BceAI	ACGGC	3 cut(s)	285, 343, 430
BcgI	CGANNNNNNTGC	2 cut(s)	175, 209
BciT130I	CCWGG	3 cut(s)	1028, 1081, 1275
BciVI	GTATCC	1 cut(s)	1248
BclI	TGATCA	1 cut(s)	652
BcoDI	GTCTC	5 cut(s)	212, 401, 438, 476, 641
BfaI	CTAG	4 cut(s)	1362, 1587, 1626, 1919
BfuAI	ACCTGC	2 cut(s)	703, 1744
BfuI	GTATCC	1 cut(s)	1248
BglI	GCCNNNNNGGC	2 cut(s)	166, 327
Bme1390I	CCNGG	3 cut(s)	1028, 1081, 1275
Bme18I	GGWCC	3 cut(s)	77, 879, 1367
BmgT120I	GGNCC	5 cut(s)	77, 200, 201, 879, 1367
BmiI	GGNNCC	7 cut(s)	79, 202, 203, 418, 860, 1557, 1704
BmrFI	CCNGG	3 cut(s)	1028, 1081, 1275
BplI	GAGNNNNNCTC	2 cut(s)	264, 296
BpmI	CTGGAG	3 cut(s)	471, 877, 1632
Bpu10I	CCTNAGC	1 cut(s)	115
BpuEI	CTTGAG	1 cut(s)	490
BsaAI	YACGTR	1 cut(s)	165
BsaBI	GATNNNNATC	1 cut(s)	1872
BsaHI	GRCGYC	1 cut(s)	1086
BsaJI	CCNNGG	2 cut(s)	223, 1080
BsaWI	WCCGGW	2 cut(s)	881, 971
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 1220, 1250
Bsc4I	CCNNNNNNNGG	8 cut(s)	68, 226, 446, 494, 684, 888, 1280, 1712
Bse118I	RCCGGY	3 cut(s)	189, 285, 392
Bse1I	ACTGG	8 cut(s)	322, 430, 488, 736, 754, 1123, 1414, 1649
Bse21I	CCTNAGG	1 cut(s)	768
Bse8I	GATNNNNATC	1 cut(s)	1872
BseBI	CCWGG	3 cut(s)	1028, 1081, 1275
BseDI	CCNNGG	2 cut(s)	223, 1080
BseGI	GGATG	4 cut(s)	520, 820, 1263, 1268
BseJI	GATNNNNATC	1 cut(s)	1872
BseLI	CCNNNNNNNGG	8 cut(s)	68, 226, 446, 494, 684, 888, 1280, 1712
BseMII	CTCAG	2 cut(s)	129, 759
BseNI	ACTGG	8 cut(s)	322, 430, 488, 736, 754, 1123, 1414, 1649
BsePI	GCGCGC	2 cut(s)	347, 349
BseRI	GAGGAG	3 cut(s)	206, 465, 1905
BseSI	GKGCMC	2 cut(s)	204, 1350
BseXI	GCAGC	6 cut(s)	198, 386, 518, 676, 1343, 1607
BseYI	CCCAGC	3 cut(s)	396, 1793, 1985
Bsh1236I	CGCG	4 cut(s)	349, 351, 385, 912
BshFI	GGCC	3 cut(s)	202, 392, 1399
BshNI	GGYRCC	2 cut(s)	416, 1702
BsiHKAI	GWGCWC	2 cut(s)	99, 372
BsiSI	CCGG	7 cut(s)	65, 190, 286, 312, 393, 882, 972
BsiWI	CGTACG	1 cut(s)	702
BslFI	GGGAC	2 cut(s)	692, 1942
BslI	CCNNNNNNNGG	8 cut(s)	68, 226, 446, 494, 684, 888, 1280, 1712
BsmAI	GTCTC	5 cut(s)	212, 401, 438, 476, 641
BsmBI	CGTCTC	1 cut(s)	212
BsmFI	GGGAC	2 cut(s)	692, 1942
BsmI	GAATGC	1 cut(s)	857
BsnI	GGCC	3 cut(s)	202, 392, 1399
Bsp120I	GGGCCC	1 cut(s)	200
Bsp1286I	GDGCHC	5 cut(s)	99, 204, 372, 863, 1350
Bsp143I	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
BspACI	CCGC	9 cut(s)	158, 175, 184, 259, 283, 319, 678, 681, 812
BspANI	GGCC	3 cut(s)	202, 392, 1399
BspCNI	CTCAG	2 cut(s)	128, 760
BspFNI	CGCG	4 cut(s)	349, 351, 385, 912
BspHI	TCATGA	2 cut(s)	949, 1143
BspLI	GGNNCC	7 cut(s)	79, 202, 203, 418, 860, 1557, 1704
BspMI	ACCTGC	2 cut(s)	703, 1744
BspPI	GGATC	3 cut(s)	758, 1727, 1862
BspT107I	GGYRCC	2 cut(s)	416, 1702
BsrBI	CCGCTC	1 cut(s)	259
BsrFI	RCCGGY	3 cut(s)	189, 285, 392
BsrI	ACTGG	8 cut(s)	322, 430, 488, 736, 754, 1123, 1414, 1649
BssAI	RCCGGY	3 cut(s)	189, 285, 392
BssECI	CCNNGG	2 cut(s)	223, 1080
BssHII	GCGCGC	2 cut(s)	347, 349
BssMI	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
BssNI	GRCGYC	1 cut(s)	1086
BssT1I	CCWWGG	1 cut(s)	223
Bst2UI	CCWGG	3 cut(s)	1028, 1081, 1275
Bst4CI	ACNGT	3 cut(s)	1684, 1789, 1809
Bst6I	CTCTTC	1 cut(s)	996
BstACI	GRCGYC	1 cut(s)	1086
BstAPI	GCANNNNNTGC	2 cut(s)	689, 1523
BstBAI	YACGTR	1 cut(s)	165
BstC8I	GCNNGC	9 cut(s)	191, 309, 345, 349, 351, 372, 394, 1519, 1970
BstDEI	CTNAG	3 cut(s)	115, 643, 768
BstENI	CCTNNNNNAGG	1 cut(s)	66
BstF5I	GGATG	4 cut(s)	520, 820, 1263, 1268
BstFNI	CGCG	4 cut(s)	349, 351, 385, 912
BstHHI	GCGC	4 cut(s)	349, 351, 353, 385
BstKTI	GATC	7 cut(s)	92, 655, 766, 1048, 1735, 1870, 1876
BstMAI	GTCTC	5 cut(s)	212, 401, 438, 476, 641
BstMBI	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
BstNI	CCWGG	3 cut(s)	1028, 1081, 1275
BstNSI	RCATGY	1 cut(s)	1972
BstSCI	CCNGG	3 cut(s)	1026, 1079, 1273
BstSLI	GKGCMC	2 cut(s)	204, 1350
BstUI	CGCG	4 cut(s)	349, 351, 385, 912
BstV1I	GCAGC	6 cut(s)	198, 386, 518, 676, 1343, 1607
Bsu36I	CCTNAGG	1 cut(s)	768
BsuI	GTATCC	1 cut(s)	1248
BsuRI	GGCC	3 cut(s)	202, 392, 1399
BtsCI	GGATG	4 cut(s)	520, 820, 1263, 1268
BtsI	GCAGTG	1 cut(s)	178
BtsIMutI	CAGTG	7 cut(s)	178, 483, 495, 1298, 1656, 1683, 1805
BveI	ACCTGC	2 cut(s)	703, 1744
Cac8I	GCNNGC	9 cut(s)	191, 309, 345, 349, 351, 372, 394, 1519, 1970
CaiI	CAGNNNCTG	1 cut(s)	787
CciI	TCATGA	2 cut(s)	949, 1143
CfoI	GCGC	4 cut(s)	349, 351, 353, 385
Cfr10I	RCCGGY	3 cut(s)	189, 285, 392
Cfr13I	GGNCC	5 cut(s)	77, 200, 201, 879, 1367
CseI	GACGC	3 cut(s)	41, 1075, 1461
Csp6I	GTAC	6 cut(s)	325, 703, 908, 1158, 1576, 1615
CviQI	GTAC	6 cut(s)	325, 703, 908, 1158, 1576, 1615
DdeI	CTNAG	3 cut(s)	115, 643, 768
DpnI	GATC	7 cut(s)	91, 654, 765, 1047, 1734, 1869, 1875
DpnII	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
DraI	TTTAAA	1 cut(s)	1761
DrdI	GACNNNNNNGTC	1 cut(s)	490
DseDI	GACNNNNNNGTC	1 cut(s)	490
EaeI	YGGCCR	1 cut(s)	1397
Eam1104I	CTCTTC	1 cut(s)	996
EarI	CTCTTC	1 cut(s)	996
EciI	GGCGGA	3 cut(s)	272, 308, 667
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	1 cut(s)	223
Eco24I	GRGCYC	3 cut(s)	99, 204, 863
Eco32I	GATATC	1 cut(s)	1271
Eco47I	GGWCC	3 cut(s)	77, 879, 1367
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	1 cut(s)	1685
Eco72I	CACGTG	1 cut(s)	165
Eco81I	CCTNAGG	1 cut(s)	768
EcoICRI	GAGCTC	1 cut(s)	97
EcoNI	CCTNNNNNAGG	1 cut(s)	66
EcoO109I	RGGNCCY	1 cut(s)	201
EcoRII	CCWGG	3 cut(s)	1026, 1079, 1273
EcoRV	GATATC	1 cut(s)	1271
EcoT14I	CCWWGG	1 cut(s)	223
EcoT22I	ATGCAT	1 cut(s)	1974
EcoT38I	GRGCYC	3 cut(s)	99, 204, 863
ErhI	CCWWGG	1 cut(s)	223
Esp3I	CGTCTC	1 cut(s)	212
FaqI	GGGAC	2 cut(s)	692, 1942
FauNDI	CATATG	1 cut(s)	795
FbaI	TGATCA	1 cut(s)	652
FblI	GTMKAC	1 cut(s)	1089
FokI	GGATG	4 cut(s)	507, 827, 1270, 1275
FriOI	GRGCYC	3 cut(s)	99, 204, 863
FspBI	CTAG	4 cut(s)	1362, 1587, 1626, 1919
GlaI	GCGC	4 cut(s)	348, 350, 352, 384
GsaI	CCCAGC	3 cut(s)	400, 1797, 1989
GsuI	CTGGAG	3 cut(s)	471, 877, 1632
HaeIII	GGCC	3 cut(s)	202, 392, 1399
HapII	CCGG	7 cut(s)	65, 190, 286, 312, 393, 882, 972
HgaI	GACGC	3 cut(s)	41, 1075, 1461
HhaI	GCGC	4 cut(s)	349, 351, 353, 385
Hin1I	GRCGYC	1 cut(s)	1086
Hin6I	GCGC	4 cut(s)	347, 349, 351, 383
HinP1I	GCGC	4 cut(s)	347, 349, 351, 383
HincII	GTYRAC	2 cut(s)	742, 1090
HindII	GTYRAC	2 cut(s)	742, 1090
HinfI	GANTC	5 cut(s)	315, 484, 572, 790, 968
HpaII	CCGG	7 cut(s)	65, 190, 286, 312, 393, 882, 972
Hpy166II	GTNNAC	2 cut(s)	742, 1090
Hpy188I	TCNGA	7 cut(s)	94, 101, 272, 996, 1252, 1665, 1945
Hpy188III	TCNNGA	7 cut(s)	406, 767, 950, 1049, 1144, 1736, 1871
Hpy8I	GTNNAC	2 cut(s)	742, 1090
Hpy99I	CGWCG	3 cut(s)	57, 407, 1091
HpyCH4III	ACNGT	3 cut(s)	1684, 1789, 1809
HpyCH4IV	ACGT	2 cut(s)	164, 705
HpyF3I	CTNAG	3 cut(s)	115, 643, 768
HpySE526I	ACGT	2 cut(s)	164, 705
Hsp92I	GRCGYC	1 cut(s)	1086
HspAI	GCGC	4 cut(s)	347, 349, 351, 383
KroI	GCCGGC	2 cut(s)	189, 392
KroNI	GCCGGC	2 cut(s)	191, 394
Ksp22I	TGATCA	1 cut(s)	652
Kzo9I	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
LmnI	GCTCC	8 cut(s)	102, 256, 273, 452, 784, 858, 1217, 1228
Lsp1109I	GCAGC	6 cut(s)	198, 386, 518, 676, 1343, 1607
MaeI	CTAG	4 cut(s)	1362, 1587, 1626, 1919
MaeII	ACGT	2 cut(s)	164, 705
MaeIII	GTNAC	4 cut(s)	718, 1442, 1678, 1976
MalI	GATC	7 cut(s)	91, 654, 765, 1047, 1734, 1869, 1875
MbiI	CCGCTC	1 cut(s)	259
MboI	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
MboII	GAAGA	6 cut(s)	604, 972, 983, 1125, 1408, 1678
MhlI	GDGCHC	5 cut(s)	99, 204, 372, 863, 1350
MlyI	GAGTC	4 cut(s)	309, 478, 784, 977
MmeI	TCCRAC	2 cut(s)	492, 1929
Mph1103I	ATGCAT	1 cut(s)	1974
MroNI	GCCGGC	2 cut(s)	189, 392
MseI	TTAA	5 cut(s)	501, 776, 900, 1686, 1760
MslI	CAYNNNNRTG	3 cut(s)	954, 1470, 1810
MspI	CCGG	7 cut(s)	65, 190, 286, 312, 393, 882, 972
MspR9I	CCNGG	3 cut(s)	1028, 1081, 1275
Mva1269I	GAATGC	1 cut(s)	857
MvaI	CCWGG	3 cut(s)	1028, 1081, 1275
MvnI	CGCG	4 cut(s)	349, 351, 385, 912
NaeI	GCCGGC	2 cut(s)	191, 394
NdeI	CATATG	1 cut(s)	795
NdeII	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
NgoMIV	GCCGGC	2 cut(s)	189, 392
NlaIV	GGNNCC	7 cut(s)	79, 202, 203, 418, 860, 1557, 1704
NmeAIII	GCCGAG	2 cut(s)	1375, 1679
NmuCI	GTSAC	3 cut(s)	718, 1678, 1976
NsiI	ATGCAT	1 cut(s)	1974
NspI	RCATGY	1 cut(s)	1972
PaeI	GCATGC	1 cut(s)	1972
PagI	TCATGA	2 cut(s)	949, 1143
PaqCI	CACCTGC	1 cut(s)	703
PauI	GCGCGC	2 cut(s)	347, 349
PcsI	WCGNNNNNNNCGW	2 cut(s)	49, 161
PctI	GAATGC	1 cut(s)	857
PdiI	GCCGGC	2 cut(s)	191, 394
PfeI	GAWTC	1 cut(s)	572
Pfl23II	CGTACG	1 cut(s)	702
PflMI	CCANNNNNTGG	1 cut(s)	1712
PleI	GAGTC	4 cut(s)	309, 478, 784, 976
PmaCI	CACGTG	1 cut(s)	165
PmlI	CACGTG	1 cut(s)	165
PpsI	GAGTC	4 cut(s)	309, 478, 784, 976
Ppu21I	YACGTR	1 cut(s)	165
Psp124BI	GAGCTC	1 cut(s)	99
Psp6I	CCWGG	3 cut(s)	1026, 1079, 1273
PspCI	CACGTG	1 cut(s)	165
PspFI	CCCAGC	3 cut(s)	396, 1793, 1985
PspGI	CCWGG	3 cut(s)	1026, 1079, 1273
PspLI	CGTACG	1 cut(s)	702
PspN4I	GGNNCC	7 cut(s)	79, 202, 203, 418, 860, 1557, 1704
PspOMI	GGGCCC	1 cut(s)	200
PspPI	GGNCC	5 cut(s)	77, 200, 201, 879, 1367
PstNI	CAGNNNCTG	1 cut(s)	787
PteI	GCGCGC	2 cut(s)	347, 349
RsaI	GTAC	6 cut(s)	326, 704, 909, 1159, 1577, 1616
RsaNI	GTAC	6 cut(s)	325, 703, 908, 1158, 1576, 1615
RseI	CAYNNNNRTG	3 cut(s)	954, 1470, 1810
SacI	GAGCTC	1 cut(s)	99
SalI	GTCGAC	1 cut(s)	1088
SaqAI	TTAA	5 cut(s)	501, 776, 900, 1686, 1760
Sau3AI	GATC	7 cut(s)	89, 652, 763, 1045, 1732, 1867, 1873
Sau96I	GGNCC	5 cut(s)	77, 200, 201, 879, 1367
SchI	GAGTC	4 cut(s)	309, 478, 784, 977
ScrFI	CCNGG	3 cut(s)	1028, 1081, 1275
SduI	GDGCHC	5 cut(s)	99, 204, 372, 863, 1350
SinI	GGWCC	3 cut(s)	77, 879, 1367
SmiMI	CAYNNNNRTG	3 cut(s)	954, 1470, 1810
SmlI	CTYRAG	1 cut(s)	469
SmoI	CTYRAG	1 cut(s)	469
SphI	GCATGC	1 cut(s)	1972
SsiI	CCGC	9 cut(s)	158, 175, 184, 259, 283, 319, 678, 681, 812
SspMI	CTAG	4 cut(s)	1362, 1587, 1626, 1919
SstI	GAGCTC	1 cut(s)	99
StyD4I	CCNGG	3 cut(s)	1026, 1079, 1273
StyI	CCWWGG	1 cut(s)	223
TaaI	ACNGT	3 cut(s)	1684, 1789, 1809
TaiI	ACGT	2 cut(s)	167, 708
TaqI	TCGA	5 cut(s)	405, 461, 570, 1048, 1089
TauI	GCSGC	4 cut(s)	160, 177, 186, 683
TfiI	GAWTC	1 cut(s)	572
Tru1I	TTAA	5 cut(s)	501, 776, 900, 1686, 1760
Tru9I	TTAA	5 cut(s)	501, 776, 900, 1686, 1760
TscAI	CASTG	7 cut(s)	185, 483, 495, 1298, 1656, 1683, 1812
TseFI	GTSAC	3 cut(s)	718, 1678, 1976
TseI	GCWGC	6 cut(s)	186, 374, 506, 664, 1331, 1595
Tsp45I	GTSAC	3 cut(s)	718, 1678, 1976
TspGWI	ACGGA	1 cut(s)	1145
TspRI	CASTG	7 cut(s)	185, 483, 495, 1298, 1656, 1683, 1812
Van91I	CCANNNNNTGG	1 cut(s)	1712
VpaK11BI	GGWCC	3 cut(s)	77, 879, 1367
XagI	CCTNNNNNAGG	1 cut(s)	66
XapI	RAATTY	1 cut(s)	1762
XceI	RCATGY	1 cut(s)	1972
XmiI	GTMKAC	1 cut(s)	1089
XspI	CTAG	4 cut(s)	1362, 1587, 1626, 1919
Zsp2I	ATGCAT	1 cut(s)	1974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.