Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001396

Physical Location & Seq

Genomic Coordinates Reverse (-)

5103698 .. 5108879

Gene Structure 5182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1039500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGTTTGCACTGCCAATGATTTGCAGGAGTGGAAAGATTTCCCAAAGGGCCTCAGAGTTCTTCTGCTTGATGGAGACACCACTTCTGCTTCCCAGATAAGATCAAAGCTTGAGGCAATGGATTATATTGTTACTGCATTCTGCAATGAAAACGAAGCATTGTCAGCATTTTCAAGCAACCCTGAAAGTTTCCATGTTGCAATTATTGAGGTAAATGCAAACAATGGCCATTGGAGTTTCCAATTTCTTGAAACTGCTAAGGAGTTGCCTATCATTATGACTTCAAACATTCATTGCCTGAGCACCATGATGAAGTGTATAGCGCTTGGTGCAGTTGAATTTCTGCGGAAACCACTCTCTGAGGACAAACTTAGGAATATTTGGCAGCATGTGGTTCATAAGGCATTCAATGCAGGAGGAAGTGTCATCTCTGAAACGCTCAAGCCTGTCAAAGAATCACTAGTATCCATGGTGCAGCCCAAACAGGAAAATGAAGAACAGAACTGTAAAATCTCTAAAGAAACAGAAAATGTTCTGCGGGTCCATGAAAATGACCAAGAACAATCAGCAGGGTGTGATAAGTACCCAGCTCCTTCAACACCGCAGCTTAAACAAGTATCACGATTACTGGACCATGGAGATTGCCAAGATCAAATTAACTGCCTGTCAGAGAAGGAGAGTGGGGAGCATGACAATGAAACTAAATCAGTCGAAACTACTTGTAACAATCCAATTGATGAAGGGAATCTTCTCACAATAGAACCTCATCATATGCTTAGGAAGACGGCGGTTAAAAAGGAAAATGTCTCAGGTGATGGGTCTAAGAGTGAGGTTAATATGTCCCGTCACCCGGATAATATAGACAGTGGTAATGATAATGGTGGTGCTGCTGAAAATCTGAATAAAGCATCGGTTCCCAATTCTTCATGCAAATCTAATCAGAAGAAGATGAAGGTAGATTGGACATCCGAACTGCATAAGAAATTTGTGCAGGCAGTAGAGCAATTGGGTGTGGATCAAGCCATTCCTTCTCGAATACTAGATCTGATGAAAACTGAAGGTTTGACGAGGCATAATGTAGCAAGCCATCTCCAGAAATACCGCATGCATAAGAGGCACATCCTACCCAAGGAAGAAGACCGGAGATTGCTGCAGCCGCATCATACTAGAGATCCAATTCACCAGAGGAGTTATTATCCTTATAGTCACAGGCCTATCATGGCCTTCCCCCCGTATCATTACACCAATCCCACCCTATCAATGCCTCCAGCCTATCCAATGTGGGGATCACAACCACCTGCCAGCAGTCATCCGCCCACCGTCCAGATGTGGGGCCAACCTGGCTATCCCCACTCCCAGTGGCAACCATCAGATCAAAGTTGGCAGTACTGGAACCCTTATCCAGGGTTACAAGCTGATGCATGGGGTTGCCCAGTAATGCCACCTGAACAAGGTGGCTATTCCCCCTATCCTCAAAACACATCAGGTTTTCAAAATGCAGGAGGTCATGCAGTTGAAAACTGCCATGGTTACAGCATGCCACAAAACTCTTTCGACATTCATCCGGCAGAAGAAGTTGTTGACAAGATTGTGAAGGAGGCAATGAGCAAGCCATGGCTACCCCTCCCTCTGGGCCTTAAGCCTCCTTCCACTGAAGGTGTACTAGCTGAGCTAACAAGGCAAGGCATCTGCAACATTCCTCAGATCAACGGCTCCAACACCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

576

Amino Acids

64.51

Weight (kDa)

6.11

Isoelectric Point (pI)

56.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	20 - 126	1.2e-07	Response regulator receiver domain
Myb_DNA-binding	PF00249	318 - 368	9.3e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001396)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020
fragaria_vesca	FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280
malus_domestica	MD06G1039500.v1.1 MD16G1269900.v1.1
prunus_persica	Prupe.5G045000_v2.0.a1 Prupe.5G045000_v2.0.a1 Prupe.5G045000_v2.0.a1
pyrus_communis	pycom06g03320 pycom16g23910
rosa_chinensis	RchiOBHm_Chr7g0208371
rosa_laevigata	RLG00000003216
rosa_multiflora	Rmu_co8240673.1_g000001 Rmu_ssc0000063.1_g000009
rosa_roxburghii	Rroxscaffold_3G00250510
rosa_rugosa	Rorug07G0104000 Rorug07G0104100 Rorug07G0104200 Rorug07G0104200 Rorug07G0104200 Rorug07G0104300
rosa_samantha	Rh7AG238600 Rh7BG234000 Rh7CG253900 Rh7DG244200
rosa_wichuraiana	Rw7G020320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1306
Acc36I	ACCTGC	1 cut(s)	1306
AciI	CCGC	8 cut(s)	346, 538, 602, 788, 1102, 1157, 1313, 1723
AclWI	GGATC	3 cut(s)	1023, 1166, 1294
AcoI	YGGCCR	1 cut(s)	226
AcsI	RAATTY	2 cut(s)	338, 983
AcuI	CTGAAG	2 cut(s)	1077, 1674
AfaI	GTAC	3 cut(s)	584, 1388, 1662
AfeI	AGCGCT	1 cut(s)	324
AfiI	CCNNNNNNNGG	7 cut(s)	850, 1129, 1283, 1330, 1403, 1451, 1630
AflII	CTTAAG	1 cut(s)	1637
AgsI	TTSAA	8 cut(s)	174, 251, 285, 338, 409, 597, 1493, 1517
AhlI	ACTAGT	1 cut(s)	460
AjnI	CCWGG	2 cut(s)	1339, 1402
AluBI	AGCT	6 cut(s)	109, 590, 607, 1415, 1667, 1672
AluI	AGCT	6 cut(s)	109, 590, 607, 1415, 1667, 1672
Alw21I	GWGCWC	1 cut(s)	305
Alw26I	GTCTC	2 cut(s)	69, 811
AlwI	GGATC	3 cut(s)	1023, 1166, 1294
Aor51HI	AGCGCT	1 cut(s)	324
AoxI	GGCC	6 cut(s)	49, 226, 1211, 1221, 1333, 1633
ApeKI	GCWGC	6 cut(s)	385, 475, 604, 887, 1150, 1153
ApoI	RAATTY	2 cut(s)	338, 983
Asp700I	GAANNNNTTC	2 cut(s)	38, 531
AspLEI	GCGC	1 cut(s)	325
AspS9I	GGNCC	5 cut(s)	49, 541, 631, 1333, 1633
AsuC2I	CCSGG	1 cut(s)	851
AsuHPI	GGTGA	3 cut(s)	824, 839, 1172
AvaII	GGWCC	2 cut(s)	541, 631
BalI	TGGCCA	1 cut(s)	228
BbsI	GAAGAC	2 cut(s)	788, 1143
Bbv12I	GWGCWC	1 cut(s)	305
BbvI	GCAGC	6 cut(s)	397, 487, 616, 874, 1137, 1165
BccI	CCATC	4 cut(s)	65, 809, 1095, 1375
BceAI	ACGGC	2 cut(s)	801, 1726
BciT130I	CCWGG	2 cut(s)	1341, 1404
BciVI	GTATCC	1 cut(s)	475
BcnI	CCSGG	1 cut(s)	851
BcoDI	GTCTC	2 cut(s)	69, 811
BcuI	ACTAGT	1 cut(s)	460
BfaI	CTAG	4 cut(s)	461, 1040, 1167, 1664
BfmI	CTRYAG	1 cut(s)	1151
BfoI	RGCGCY	1 cut(s)	326
BfrI	CTTAAG	1 cut(s)	1637
BfuAI	ACCTGC	1 cut(s)	1306
BfuI	GTATCC	1 cut(s)	475
BglI	GCCNNNNNGGC	1 cut(s)	1341
BglII	AGATCT	1 cut(s)	1042
BisI	GCNGC	7 cut(s)	386, 476, 605, 888, 1151, 1154, 1157
BlpI	GCTNAGC	1 cut(s)	1668
BlsI	GCNGC	7 cut(s)	387, 477, 606, 889, 1152, 1155, 1158
BmcAI	AGTACT	1 cut(s)	1388
Bme1390I	CCNGG	3 cut(s)	851, 1341, 1404
Bme18I	GGWCC	2 cut(s)	541, 631
BmgT120I	GGNCC	5 cut(s)	49, 541, 631, 1333, 1633
BmiI	GGNNCC	5 cut(s)	542, 915, 1334, 1394, 1714
BmrFI	CCNGG	3 cut(s)	851, 1341, 1404
BmrI	ACTGGG	2 cut(s)	1351, 1427
BmsI	GCATC	4 cut(s)	917, 1168, 1408, 1695
BmuI	ACTGGG	2 cut(s)	1351, 1427
BpiI	GAAGAC	2 cut(s)	788, 1143
BpmI	CTGGAG	2 cut(s)	1076, 1251
Bpu10I	CCTNAGC	3 cut(s)	258, 299, 776
Bpu1102I	GCTNAGC	1 cut(s)	1668
BpuEI	CTTGAG	2 cut(s)	131, 425
BpuMI	CCSGG	1 cut(s)	851
BsaJI	CCNNGG	6 cut(s)	468, 634, 1128, 1403, 1525, 1613
BsaWI	WCCGGW	1 cut(s)	1140
BsaXI	ACNNNNNCTCC	2 cut(s)	408, 438
Bsc4I	CCNNNNNNNGG	7 cut(s)	850, 1129, 1283, 1330, 1403, 1451, 1630
Bse1I	ACTGG	4 cut(s)	633, 1357, 1394, 1433
Bse3DI	GCAATG	4 cut(s)	123, 151, 292, 1608
BseBI	CCWGG	2 cut(s)	1341, 1404
BseDI	CCNNGG	6 cut(s)	468, 634, 1128, 1403, 1525, 1613
BseGI	GGATG	4 cut(s)	965, 1119, 1309, 1561
BseLI	CCNNNNNNNGG	7 cut(s)	850, 1129, 1283, 1330, 1403, 1451, 1630
BseMI	GCAATG	4 cut(s)	123, 151, 292, 1608
BseMII	CTCAG	6 cut(s)	67, 290, 351, 822, 1659, 1715
BseNI	ACTGG	4 cut(s)	633, 1357, 1394, 1433
BseRI	GAGGAG	1 cut(s)	1201
BseXI	GCAGC	6 cut(s)	397, 487, 616, 874, 1137, 1165
BseYI	CCCAGC	1 cut(s)	586
BsgI	GTGCAG	3 cut(s)	351, 494, 1010
BshFI	GGCC	6 cut(s)	51, 228, 1213, 1223, 1335, 1635
BsiHKAI	GWGCWC	1 cut(s)	305
BsiSI	CCGG	3 cut(s)	851, 1141, 1565
BslFI	GGGAC	1 cut(s)	826
BslI	CCNNNNNNNGG	7 cut(s)	850, 1129, 1283, 1330, 1403, 1451, 1630
BsmAI	GTCTC	2 cut(s)	69, 811
BsmFI	GGGAC	1 cut(s)	826
BsmI	GAATGC	2 cut(s)	137, 404
BsnI	GGCC	6 cut(s)	51, 228, 1213, 1223, 1335, 1635
Bsp1286I	GDGCHC	1 cut(s)	305
Bsp143I	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
Bsp1720I	GCTNAGC	1 cut(s)	1668
Bsp19I	CCATGG	4 cut(s)	468, 634, 1525, 1613
BspACI	CCGC	8 cut(s)	346, 538, 602, 788, 1102, 1157, 1313, 1723
BspANI	GGCC	6 cut(s)	51, 228, 1213, 1223, 1335, 1635
BspCNI	CTCAG	6 cut(s)	66, 291, 352, 821, 1660, 1714
BspLI	GGNNCC	5 cut(s)	542, 915, 1334, 1394, 1714
BspMAI	CTGCAG	1 cut(s)	1155
BspMI	ACCTGC	1 cut(s)	1306
BspPI	GGATC	3 cut(s)	1023, 1166, 1294
BspTI	CTTAAG	1 cut(s)	1637
BsrDI	GCAATG	4 cut(s)	123, 151, 292, 1608
BsrI	ACTGG	4 cut(s)	633, 1357, 1394, 1433
BssECI	CCNNGG	6 cut(s)	468, 634, 1128, 1403, 1525, 1613
BssMI	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
BssT1I	CCWWGG	5 cut(s)	468, 634, 1128, 1525, 1613
Bst2UI	CCWGG	2 cut(s)	1341, 1404
Bst4CI	ACNGT	3 cut(s)	506, 866, 1321
BstAFI	CTTAAG	1 cut(s)	1637
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstC8I	GCNNGC	6 cut(s)	993, 1084, 1106, 1303, 1538, 1610
BstDSI	CCRYGG	4 cut(s)	468, 634, 1525, 1613
BstENI	CCTNNNNNAGG	3 cut(s)	1127, 1401, 1449
BstF5I	GGATG	4 cut(s)	965, 1119, 1309, 1561
BstH2I	RGCGCY	1 cut(s)	326
BstHHI	GCGC	1 cut(s)	325
BstKTI	GATC	8 cut(s)	104, 652, 1018, 1045, 1174, 1289, 1375, 1707
BstMAI	GTCTC	2 cut(s)	69, 811
BstMBI	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
BstMWI	GCNNNNNNNGC	7 cut(s)	164, 329, 410, 1114, 1156, 1341, 1678
BstNI	CCWGG	2 cut(s)	1341, 1404
BstNSI	RCATGY	3 cut(s)	392, 1108, 1540
BstSCI	CCNGG	3 cut(s)	849, 1339, 1402
BstSFI	CTRYAG	1 cut(s)	1151
BstV1I	GCAGC	6 cut(s)	397, 487, 616, 874, 1137, 1165
BstV2I	GAAGAC	2 cut(s)	788, 1143
BstX2I	RGATCY	2 cut(s)	1042, 1171
BstYI	RGATCY	2 cut(s)	1042, 1171
BsuI	GTATCC	1 cut(s)	475
BsuRI	GGCC	6 cut(s)	51, 228, 1213, 1223, 1335, 1635
BtgI	CCRYGG	4 cut(s)	468, 634, 1525, 1613
BtsCI	GGATG	4 cut(s)	965, 1119, 1309, 1561
BtsI	GCAGTG	1 cut(s)	9
BtsIMutI	CAGTG	4 cut(s)	9, 871, 1364, 1650
BveI	ACCTGC	1 cut(s)	1306
Cac8I	GCNNGC	6 cut(s)	993, 1084, 1106, 1303, 1538, 1610
CfoI	GCGC	1 cut(s)	325
Cfr13I	GGNCC	5 cut(s)	49, 541, 631, 1333, 1633
Csp6I	GTAC	3 cut(s)	583, 1387, 1661
CviQI	GTAC	3 cut(s)	583, 1387, 1661
DpnI	GATC	8 cut(s)	103, 651, 1017, 1044, 1173, 1288, 1374, 1706
DpnII	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
EaeI	YGGCCR	1 cut(s)	226
EciI	GGCGGA	1 cut(s)	1302
Eco130I	CCWWGG	5 cut(s)	468, 634, 1128, 1525, 1613
Eco147I	AGGCCT	1 cut(s)	1213
Eco47I	GGWCC	2 cut(s)	541, 631
Eco47III	AGCGCT	1 cut(s)	324
Eco57I	CTGAAG	2 cut(s)	1077, 1674
EcoNI	CCTNNNNNAGG	3 cut(s)	1127, 1401, 1449
EcoO109I	RGGNCCY	1 cut(s)	49
EcoRII	CCWGG	2 cut(s)	1339, 1402
EcoT14I	CCWWGG	5 cut(s)	468, 634, 1128, 1525, 1613
EcoT22I	ATGCAT	2 cut(s)	1110, 1423
ErhI	CCWWGG	5 cut(s)	468, 634, 1128, 1525, 1613
FalI	AAGNNNNNCTT	2 cut(s)	732, 764
FaqI	GGGAC	1 cut(s)	826
FauI	CCCGC	1 cut(s)	531
FauNDI	CATATG	1 cut(s)	771
Fnu4HI	GCNGC	7 cut(s)	386, 476, 605, 888, 1151, 1154, 1157
FokI	GGATG	4 cut(s)	952, 1106, 1296, 1548
Fsp4HI	GCNGC	7 cut(s)	386, 476, 605, 888, 1151, 1154, 1157
FspBI	CTAG	4 cut(s)	461, 1040, 1167, 1664
GlaI	GCGC	1 cut(s)	324
GluI	GCNGC	7 cut(s)	386, 476, 605, 888, 1151, 1154, 1157
GsaI	CCCAGC	1 cut(s)	590
GsuI	CTGGAG	2 cut(s)	1076, 1251
HaeII	RGCGCY	1 cut(s)	326
HaeIII	GGCC	6 cut(s)	51, 228, 1213, 1223, 1335, 1635
HapII	CCGG	3 cut(s)	851, 1141, 1565
HhaI	GCGC	1 cut(s)	325
Hin6I	GCGC	1 cut(s)	323
HinP1I	GCGC	1 cut(s)	323
HincII	GTYRAC	1 cut(s)	1582
HindII	GTYRAC	1 cut(s)	1582
HindIII	AAGCTT	1 cut(s)	107
HinfI	GANTC	2 cut(s)	455, 745
HpaII	CCGG	3 cut(s)	851, 1141, 1565
HphI	GGTGA	3 cut(s)	824, 839, 1172
Hpy166II	GTNNAC	2 cut(s)	1582, 1661
Hpy188III	TCNNGA	5 cut(s)	248, 621, 1032, 1093, 1324
Hpy8I	GTNNAC	2 cut(s)	1582, 1661
HpyCH4III	ACNGT	3 cut(s)	506, 866, 1321
HpyF10VI	GCNNNNNNNGC	7 cut(s)	164, 329, 410, 1114, 1156, 1341, 1678
HspAI	GCGC	1 cut(s)	323
Kzo9I	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
LmnI	GCTCC	3 cut(s)	595, 685, 1718
Lsp1109I	GCAGC	6 cut(s)	397, 487, 616, 874, 1137, 1165
LweI	GCATC	4 cut(s)	917, 1168, 1408, 1695
MaeI	CTAG	4 cut(s)	461, 1040, 1167, 1664
MaeIII	GTNAC	6 cut(s)	130, 722, 845, 1205, 1407, 1529
MalI	GATC	8 cut(s)	103, 651, 1017, 1044, 1173, 1288, 1374, 1706
MboI	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
MfeI	CAATTG	2 cut(s)	732, 1004
MflI	RGATCY	2 cut(s)	1042, 1171
MhlI	GDGCHC	1 cut(s)	305
MlsI	TGGCCA	1 cut(s)	228
MluCI	AATT	9 cut(s)	201, 242, 338, 654, 732, 919, 983, 1004, 1176
MluNI	TGGCCA	1 cut(s)	228
Mox20I	TGGCCA	1 cut(s)	228
Mph1103I	ATGCAT	2 cut(s)	1110, 1423
MroXI	GAANNNNTTC	2 cut(s)	38, 531
MscI	TGGCCA	1 cut(s)	228
MseI	TTAA	5 cut(s)	609, 657, 792, 834, 1638
MslI	CAYNNNNRTG	3 cut(s)	308, 549, 693
Msp20I	TGGCCA	1 cut(s)	228
MspA1I	CMGCKG	1 cut(s)	1725
MspCI	CTTAAG	1 cut(s)	1637
MspI	CCGG	3 cut(s)	851, 1141, 1565
MspR9I	CCNGG	3 cut(s)	851, 1341, 1404
MunI	CAATTG	2 cut(s)	732, 1004
Mva1269I	GAATGC	2 cut(s)	137, 404
MvaI	CCWGG	2 cut(s)	1341, 1404
MwoI	GCNNNNNNNGC	7 cut(s)	164, 329, 410, 1114, 1156, 1341, 1678
NciI	CCSGG	1 cut(s)	851
NcoI	CCATGG	4 cut(s)	468, 634, 1525, 1613
NdeI	CATATG	1 cut(s)	771
NdeII	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
NlaIV	GGNNCC	5 cut(s)	542, 915, 1334, 1394, 1714
NmuCI	GTSAC	2 cut(s)	845, 1205
NsiI	ATGCAT	2 cut(s)	1110, 1423
NspI	RCATGY	3 cut(s)	392, 1108, 1540
PaeI	GCATGC	2 cut(s)	1108, 1540
PaqCI	CACCTGC	1 cut(s)	1306
PceI	AGGCCT	1 cut(s)	1213
PctI	GAATGC	2 cut(s)	137, 404
PdmI	GAANNNNTTC	2 cut(s)	38, 531
PfeI	GAWTC	2 cut(s)	455, 745
PkrI	GCNGC	7 cut(s)	387, 477, 606, 889, 1152, 1155, 1158
Psp6I	CCWGG	2 cut(s)	1339, 1402
PspFI	CCCAGC	1 cut(s)	586
PspGI	CCWGG	2 cut(s)	1339, 1402
PspN4I	GGNNCC	5 cut(s)	542, 915, 1334, 1394, 1714
PspPI	GGNCC	5 cut(s)	49, 541, 631, 1333, 1633
PstI	CTGCAG	1 cut(s)	1155
PsuI	RGATCY	2 cut(s)	1042, 1171
RsaI	GTAC	3 cut(s)	584, 1388, 1662
RsaNI	GTAC	3 cut(s)	583, 1387, 1661
RseI	CAYNNNNRTG	3 cut(s)	308, 549, 693
SaqAI	TTAA	5 cut(s)	609, 657, 792, 834, 1638
SatI	GCNGC	7 cut(s)	386, 476, 605, 888, 1151, 1154, 1157
Sau3AI	GATC	8 cut(s)	101, 649, 1015, 1042, 1171, 1286, 1372, 1704
Sau96I	GGNCC	5 cut(s)	49, 541, 631, 1333, 1633
ScaI	AGTACT	1 cut(s)	1388
ScrFI	CCNGG	3 cut(s)	851, 1341, 1404
SduI	GDGCHC	1 cut(s)	305
SfaNI	GCATC	4 cut(s)	917, 1168, 1408, 1695
SfcI	CTRYAG	1 cut(s)	1151
SinI	GGWCC	2 cut(s)	541, 631
SmiMI	CAYNNNNRTG	3 cut(s)	308, 549, 693
SmlI	CTYRAG	3 cut(s)	110, 440, 1637
SmoI	CTYRAG	3 cut(s)	110, 440, 1637
SpeI	ACTAGT	1 cut(s)	460
SphI	GCATGC	2 cut(s)	1108, 1540
Sse9I	AATT	9 cut(s)	201, 242, 338, 654, 732, 919, 983, 1004, 1176
SseBI	AGGCCT	1 cut(s)	1213
SsiI	CCGC	8 cut(s)	346, 538, 602, 788, 1102, 1157, 1313, 1723
SspI	AATATT	1 cut(s)	379
SspMI	CTAG	4 cut(s)	461, 1040, 1167, 1664
StuI	AGGCCT	1 cut(s)	1213
StyD4I	CCNGG	3 cut(s)	849, 1339, 1402
StyI	CCWWGG	5 cut(s)	468, 634, 1128, 1525, 1613
TaaI	ACNGT	3 cut(s)	506, 866, 1321
TaqI	TCGA	3 cut(s)	711, 1033, 1554
TasI	AATT	9 cut(s)	201, 242, 338, 654, 732, 919, 983, 1004, 1176
TatI	WGTACW	2 cut(s)	1386, 1660
TauI	GCSGC	1 cut(s)	1159
TfiI	GAWTC	2 cut(s)	455, 745
Tru1I	TTAA	5 cut(s)	609, 657, 792, 834, 1638
Tru9I	TTAA	5 cut(s)	609, 657, 792, 834, 1638
TscAI	CASTG	4 cut(s)	16, 871, 1364, 1657
TseFI	GTSAC	2 cut(s)	845, 1205
TseI	GCWGC	6 cut(s)	385, 475, 604, 887, 1150, 1153
Tsp45I	GTSAC	2 cut(s)	845, 1205
TspRI	CASTG	4 cut(s)	16, 871, 1364, 1657
Vha464I	CTTAAG	1 cut(s)	1637
VpaK11BI	GGWCC	2 cut(s)	541, 631
XagI	CCTNNNNNAGG	3 cut(s)	1127, 1401, 1449
XapI	RAATTY	2 cut(s)	338, 983
XceI	RCATGY	3 cut(s)	392, 1108, 1540
XmnI	GAANNNNTTC	2 cut(s)	38, 531
XspI	CTAG	4 cut(s)	461, 1040, 1167, 1664
ZrmI	AGTACT	1 cut(s)	1388
Zsp2I	ATGCAT	2 cut(s)	1110, 1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.