Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001396

Physical Location & Seq

Genomic Coordinates Forward (+)

8186728 .. 8190967

Gene Structure 4240 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0104000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGAGCAAATATTTCGACTTTTCACGATTCTGGTGATTTTGGATTTGGGCTCAGCTTGTGCTCAAATCTATGGAGACCAGCCACTCGCCAAGATCAACATTCGGAAAACCACTCTCGCCATTCATGACTCGGCCTCCATTAGAGCCTACCCTTCTGTTCTTGGCATACAGGGTGAGGATACAGATTGGGTGACTGTGGATCTCATGTACCCTGATGCTTCTGATAATGACTGGGTTGGAGTTTTTTCTCCTGGAAGACTCAATGCATCACAGTGCCCCCCAGTAGATGGTCAAAGAGAACAAGCTCCATATATATGCACTGCACCTATAAAGTACAAATATGCAAAACAAGACAATCCAGGTTATACAAAGACCGGCAATGCAACTTTGAAGTTTCAGCTTATAAATCAGCGAGCAGATTTCTCTTTTGCATTATTTTCAGGCGGATTGTCAAATCCAAAATTGGTGGCAATTTCAAATTTCTTGACATTTGCCAATCCTAAAGCGCCTGTTTATCCACGTCTGGCTCAAGGGAAGTCTTGGAATAAAATGACAGTAACTTGGACAAGTGGCTACGGCGTAGGCGAAGCTGTTCCATTTGTTGAGTGGGGTATGAAGGGCGATATTCGAAAGCGATCTGCAGCTGCAACATTGACATTTGATCAGAACAGCTTGTGTGGTTCACCTGCAAGGACAGTTGGGTGGCGCGATCCTGGTTTCATACACACAAGTTTCCTGAACAACTTGTGGCCAAACACATTGTACACCTATAGGATGGGTCATCGTTACTTGGATGGTCAGTATATTTGGAGCAAGGTCTACTCATTCAAATCATCTCCATATCCTGGACAAGATTCCTTGCAGCGCGTTGTAATATTTGGTGACATGGGAAAGGCAGAGCGTGATGGTTCAAATGAGTACAGTGATTATCAACCTGGTGCTCTGAACACTACAGATCAAGTCATCAGTGACTTAAACAACATTGACATAGTTTTTCATATAGGAGATCTATCATATGCAAATGGCTATATTTCACAATGGGACCAATTCACAGCACAGGTGGAGCCCATTGCATCAACTGTTCCGTATATGGTTGGCAGTGGTAATCATGAACGTGATTGGCCTGATTCGGGGTCCTATTACAACGGAATGGATTCAGGTGGAGAATGTGGTGTGCTTGGTGAGACCATGTTTTACGTTCCAGCTCACAATCGAGCTAAATATTGGTACTCTACAGATTATGGATTGTTTCACTTCTGTATAGCTGACACAGAACATGACTGGAGGGAGGGAACAGAGCAGTACAAGTTCATTGAGAATTGCCTTGCATCCGTGGATAGACAAAAGCAACCTTGGTTGATCTTTGCAGGTCATCGTGTCCTTGGTTATACATCTGACAAATGGTATAGTCGAGGGGGCGCATTTGAAGAGCCTATGGGAAGGGAAAGCTTGCAGAAACTTTGGCAGAAGTACAAGGTAGACATTGCATTTTATGGCCATGTCCATAACTATGAAAGGACATGCCCCATCTATGAGAACCAATGCGTATCTTCAGAAAGATCTCACTACTCTGGGAAATTTAATGGAACAATCCATGTTGTTGTTGGAGGAGCTGGAAGCCACTTATCTGACTTCAGCCAACAACAACCAGGTTGGAGTCTCTACAGAGATCATGACTGGGGATTTGTAAAATTGACTGCATTCAATCACACATCCCTCTTCTTTGAGTACAAGAAAAGCAGCGACAGGAAGGTTTACGATTCCTTCACCATATCAAGGGACTACACAGATGTATTGGCTTGTGTTCACGACAGTTGCGAACCAACGACAGCAGCATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

613

Amino Acids

69.25

Weight (kDa)

5.94

Isoelectric Point (pI)

33.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
fn3_PAP	PF17808	47 - 166	2.2e-44	Fn3-like domain from Purple Acid Phosphatase
Pur_ac_phosph_N	PF16656	173 - 277	5.8e-13	Purple acid Phosphatase, N-terminal domain
Metallophos	PF00149	289 - 504	3.7e-16	Calcineurin-like phosphoesterase
Metallophos_C	PF14008	529 - 588	1.3e-17	Iron/zinc purple acid phosphatase-like protein C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001396)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020
fragaria_vesca	FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280
malus_domestica	MD06G1039500.v1.1 MD16G1269900.v1.1
prunus_persica	Prupe.5G045000_v2.0.a1 Prupe.5G045000_v2.0.a1 Prupe.5G045000_v2.0.a1
pyrus_communis	pycom06g03320 pycom16g23910
rosa_chinensis	RchiOBHm_Chr7g0208371
rosa_laevigata	RLG00000003216
rosa_multiflora	Rmu_co8240673.1_g000001 Rmu_ssc0000063.1_g000009
rosa_roxburghii	Rroxscaffold_3G00250510
rosa_rugosa	Rorug07G0104000 Rorug07G0104100 Rorug07G0104200 Rorug07G0104200 Rorug07G0104200 Rorug07G0104300
rosa_samantha	Rh7AG238600 Rh7BG234000 Rh7CG253900 Rh7DG244200
rosa_wichuraiana	Rw7G020320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	404
AarI	CACCTGC	1 cut(s)	694
Acc36I	ACCTGC	2 cut(s)	694, 1358
AccB7I	CCANNNNNTGG	2 cut(s)	287, 845
AccI	GTMKAC	2 cut(s)	819, 1479
AccII	CGCG	2 cut(s)	708, 867
AciI	CCGC	1 cut(s)	444
AclWI	GGATC	2 cut(s)	207, 704
AcoI	YGGCCR	2 cut(s)	749, 1495
AcsI	RAATTY	2 cut(s)	478, 1577
AcuI	CTGAAG	2 cut(s)	1536, 1618
AfaI	GTAC	8 cut(s)	209, 335, 764, 920, 1229, 1304, 1472, 1730
AfiI	CCNNNNNNNGG	4 cut(s)	287, 845, 1130, 1776
AgsI	TTSAA	6 cut(s)	391, 477, 829, 912, 1427, 1705
AjiI	CACGTC	1 cut(s)	521
AjnI	CCWGG	6 cut(s)	250, 358, 712, 844, 934, 1648
Alw21I	GWGCWC	2 cut(s)	64, 943
Alw26I	GTCTC	3 cut(s)	69, 1178, 1664
AlwI	GGATC	2 cut(s)	207, 704
AoxI	GGCC	4 cut(s)	132, 749, 1121, 1495
ApeKI	GCWGC	5 cut(s)	641, 644, 862, 1740, 1832
ApoI	RAATTY	2 cut(s)	478, 1577
ArsI	GACNNNNNNTTYG	2 cut(s)	1667, 1699
Asp700I	GAANNNNTTC	2 cut(s)	591, 1153
AspLEI	GCGC	4 cut(s)	508, 708, 867, 1421
AspS9I	GGNCC	2 cut(s)	1042, 1134
AsuHPI	GGTGA	7 cut(s)	46, 185, 202, 675, 893, 1193, 1759
AsuII	TTCGAA	1 cut(s)	628
AvaII	GGWCC	2 cut(s)	1042, 1134
BaeGI	GKGCMC	1 cut(s)	278
BalI	TGGCCA	2 cut(s)	751, 1497
BanII	GRGCYC	2 cut(s)	53, 1068
BbsI	GAAGAC	1 cut(s)	262
Bbv12I	GWGCWC	2 cut(s)	64, 943
BbvI	GCAGC	4 cut(s)	631, 653, 874, 1752
BccI	CCATC	5 cut(s)	281, 769, 788, 899, 1535
BceAI	ACGGC	1 cut(s)	592
BcgI	CGANNNNNNTGC	1 cut(s)	30
BciT130I	CCWGG	6 cut(s)	252, 360, 714, 846, 936, 1650
BciVI	GTATCC	1 cut(s)	172
BclI	TGATCA	1 cut(s)	661
BcoDI	GTCTC	3 cut(s)	69, 1178, 1664
BfmI	CTRYAG	5 cut(s)	639, 769, 951, 1233, 1663
BfoI	RGCGCY	1 cut(s)	509
BfuAI	ACCTGC	2 cut(s)	694, 1358
BfuI	GTATCC	1 cut(s)	172
BglII	AGATCT	2 cut(s)	1006, 1559
BisI	GCNGC	5 cut(s)	642, 645, 863, 1741, 1833
BlpI	GCTNAGC	1 cut(s)	52
BlsI	GCNGC	5 cut(s)	643, 646, 864, 1742, 1834
Bme1390I	CCNGG	6 cut(s)	252, 360, 714, 846, 936, 1650
Bme18I	GGWCC	2 cut(s)	1042, 1134
BmgBI	CACGTC	1 cut(s)	521
BmgT120I	GGNCC	2 cut(s)	1042, 1134
BmiI	GGNNCC	3 cut(s)	1043, 1065, 1135
BmrFI	CCNGG	6 cut(s)	252, 360, 714, 846, 936, 1650
BmrI	ACTGGG	3 cut(s)	241, 275, 1687
BmsI	GCATC	4 cut(s)	205, 275, 1082, 1337
BmuI	ACTGGG	3 cut(s)	241, 275, 1687
BpiI	GAAGAC	1 cut(s)	262
BpmI	CTGGAG	1 cut(s)	1303
Bpu1102I	GCTNAGC	1 cut(s)	52
Bpu14I	TTCGAA	1 cut(s)	628
BpuEI	CTTGAG	1 cut(s)	513
BsaI	GGTCTC	2 cut(s)	69, 1178
BsaJI	CCNNGG	3 cut(s)	1332, 1352, 1381
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bsc4I	CCNNNNNNNGG	4 cut(s)	287, 845, 1130, 1776
Bse118I	RCCGGY	1 cut(s)	374
Bse1I	ACTGG	4 cut(s)	236, 281, 1286, 1682
Bse3DI	GCAATG	3 cut(s)	385, 1068, 1482
BseBI	CCWGG	6 cut(s)	252, 360, 714, 846, 936, 1650
BseDI	CCNNGG	3 cut(s)	1332, 1352, 1381
BseGI	GGATG	4 cut(s)	780, 799, 1328, 1712
BseLI	CCNNNNNNNGG	4 cut(s)	287, 845, 1130, 1776
BseMI	GCAATG	3 cut(s)	385, 1068, 1482
BseMII	CTCAG	1 cut(s)	66
BseNI	ACTGG	4 cut(s)	236, 281, 1286, 1682
BseRI	GAGGAG	1 cut(s)	1623
BseSI	GKGCMC	1 cut(s)	278
BseXI	GCAGC	4 cut(s)	631, 653, 874, 1752
BsgI	GTGCAG	1 cut(s)	306
Bsh1236I	CGCG	2 cut(s)	708, 867
BshFI	GGCC	4 cut(s)	134, 751, 1123, 1497
BsiHKAI	GWGCWC	2 cut(s)	64, 943
BsiSI	CCGG	1 cut(s)	375
BslFI	GGGAC	2 cut(s)	1055, 1793
BslI	CCNNNNNNNGG	4 cut(s)	287, 845, 1130, 1776
BsmAI	GTCTC	3 cut(s)	69, 1178, 1664
BsmFI	GGGAC	2 cut(s)	1055, 1793
BsmI	GAATGC	1 cut(s)	1700
BsnI	GGCC	4 cut(s)	134, 751, 1123, 1497
Bso31I	GGTCTC	2 cut(s)	69, 1178
Bsp119I	TTCGAA	1 cut(s)	628
Bsp1286I	GDGCHC	5 cut(s)	53, 64, 278, 943, 1068
Bsp1407I	TGTACA	1 cut(s)	762
Bsp1720I	GCTNAGC	1 cut(s)	52
BspACI	CCGC	1 cut(s)	444
BspANI	GGCC	4 cut(s)	134, 751, 1123, 1497
BspCNI	CTCAG	1 cut(s)	65
BspFNI	CGCG	2 cut(s)	708, 867
BspHI	TCATGA	3 cut(s)	124, 1108, 1672
BspLI	GGNNCC	3 cut(s)	1043, 1065, 1135
BspMAI	CTGCAG	1 cut(s)	643
BspMI	ACCTGC	2 cut(s)	694, 1358
BspPI	GGATC	2 cut(s)	207, 704
BspQI	GCTCTTC	1 cut(s)	1422
BspT104I	TTCGAA	1 cut(s)	628
BspTNI	GGTCTC	2 cut(s)	69, 1178
BsrDI	GCAATG	3 cut(s)	385, 1068, 1482
BsrFI	RCCGGY	1 cut(s)	374
BsrGI	TGTACA	1 cut(s)	762
BsrI	ACTGG	4 cut(s)	236, 281, 1286, 1682
BssAI	RCCGGY	1 cut(s)	374
BssECI	CCNNGG	3 cut(s)	1332, 1352, 1381
BssT1I	CCWWGG	2 cut(s)	1352, 1381
Bst2UI	CCWGG	6 cut(s)	252, 360, 714, 846, 936, 1650
Bst4CI	ACNGT	7 cut(s)	196, 273, 556, 697, 923, 1081, 1814
Bst6I	CTCTTC	2 cut(s)	1422, 1724
BstAUI	TGTACA	1 cut(s)	762
BstBI	TTCGAA	1 cut(s)	628
BstC8I	GCNNGC	2 cut(s)	414, 1451
BstDEI	CTNAG	1 cut(s)	52
BstDSI	CCRYGG	1 cut(s)	1332
BstF5I	GGATG	4 cut(s)	780, 799, 1328, 1712
BstFNI	CGCG	2 cut(s)	708, 867
BstH2I	RGCGCY	1 cut(s)	509
BstHHI	GCGC	4 cut(s)	508, 708, 867, 1421
BstMAI	GTCTC	3 cut(s)	69, 1178, 1664
BstNI	CCWGG	6 cut(s)	252, 360, 714, 846, 936, 1650
BstNSI	RCATGY	1 cut(s)	1524
BstSCI	CCNGG	6 cut(s)	250, 358, 712, 844, 934, 1648
BstSFI	CTRYAG	5 cut(s)	639, 769, 951, 1233, 1663
BstSLI	GKGCMC	1 cut(s)	278
BstUI	CGCG	2 cut(s)	708, 867
BstV1I	GCAGC	4 cut(s)	631, 653, 874, 1752
BstV2I	GAAGAC	1 cut(s)	262
BstX2I	RGATCY	3 cut(s)	199, 1006, 1559
BstYI	RGATCY	3 cut(s)	199, 1006, 1559
BsuI	GTATCC	1 cut(s)	172
BsuRI	GGCC	4 cut(s)	134, 751, 1123, 1497
BtgI	CCRYGG	1 cut(s)	1332
BtrI	CACGTC	1 cut(s)	521
BtsCI	GGATG	4 cut(s)	780, 799, 1328, 1712
BtsI	GCAGTG	2 cut(s)	318, 1105
BtsIMutI	CAGTG	5 cut(s)	278, 318, 928, 973, 1105
BveI	ACCTGC	2 cut(s)	694, 1358
Cac8I	GCNNGC	2 cut(s)	414, 1451
CciI	TCATGA	3 cut(s)	124, 1108, 1672
CfoI	GCGC	4 cut(s)	508, 708, 867, 1421
Cfr10I	RCCGGY	1 cut(s)	374
Cfr13I	GGNCC	2 cut(s)	1042, 1134
CsiI	ACCWGGT	2 cut(s)	934, 1648
Csp6I	GTAC	8 cut(s)	208, 334, 763, 919, 1228, 1303, 1471, 1729
CspCI	CAANNNNNGTGG	2 cut(s)	447, 482
CviQI	GTAC	8 cut(s)	208, 334, 763, 919, 1228, 1303, 1471, 1729
DdeI	CTNAG	1 cut(s)	52
EaeI	YGGCCR	2 cut(s)	749, 1495
Eam1104I	CTCTTC	2 cut(s)	1422, 1724
EarI	CTCTTC	2 cut(s)	1422, 1724
EciI	GGCGGA	1 cut(s)	459
Eco130I	CCWWGG	2 cut(s)	1352, 1381
Eco24I	GRGCYC	2 cut(s)	53, 1068
Eco31I	GGTCTC	2 cut(s)	69, 1178
Eco47I	GGWCC	2 cut(s)	1042, 1134
Eco57I	CTGAAG	2 cut(s)	1536, 1618
EcoO109I	RGGNCCY	1 cut(s)	1134
EcoRII	CCWGG	6 cut(s)	250, 358, 712, 844, 934, 1648
EcoT14I	CCWWGG	2 cut(s)	1352, 1381
EcoT22I	ATGCAT	1 cut(s)	268
EcoT38I	GRGCYC	2 cut(s)	53, 1068
ErhI	CCWWGG	2 cut(s)	1352, 1381
FaqI	GGGAC	2 cut(s)	1055, 1793
FauNDI	CATATG	1 cut(s)	1015
FbaI	TGATCA	1 cut(s)	661
FblI	GTMKAC	2 cut(s)	819, 1479
Fnu4HI	GCNGC	5 cut(s)	642, 645, 863, 1741, 1833
FokI	GGATG	4 cut(s)	787, 806, 1315, 1699
FriOI	GRGCYC	2 cut(s)	53, 1068
Fsp4HI	GCNGC	5 cut(s)	642, 645, 863, 1741, 1833
GlaI	GCGC	4 cut(s)	507, 707, 866, 1420
GluI	GCNGC	5 cut(s)	642, 645, 863, 1741, 1833
GsuI	CTGGAG	1 cut(s)	1303
HaeII	RGCGCY	1 cut(s)	509
HaeIII	GGCC	4 cut(s)	134, 751, 1123, 1497
HapII	CCGG	1 cut(s)	375
HhaI	GCGC	4 cut(s)	508, 708, 867, 1421
Hin6I	GCGC	4 cut(s)	506, 706, 865, 1419
HinP1I	GCGC	4 cut(s)	506, 706, 865, 1419
HindIII	AAGCTT	1 cut(s)	1447
HinfI	GANTC	8 cut(s)	28, 128, 258, 854, 1127, 1154, 1657, 1760
HpaII	CCGG	1 cut(s)	375
HphI	GGTGA	7 cut(s)	46, 185, 202, 675, 893, 1193, 1759
Hpy166II	GTNNAC	6 cut(s)	683, 765, 820, 1480, 1756, 1807
Hpy188I	TCNGA	7 cut(s)	105, 223, 666, 945, 1396, 1555, 1630
Hpy188III	TCNNGA	7 cut(s)	25, 125, 484, 736, 1109, 1673, 1808
Hpy8I	GTNNAC	6 cut(s)	683, 765, 820, 1480, 1756, 1807
HpyAV	CCTTC	5 cut(s)	162, 610, 1434, 1744, 1774
HpyCH4III	ACNGT	7 cut(s)	196, 273, 556, 697, 923, 1081, 1814
HpyCH4IV	ACGT	3 cut(s)	520, 1114, 1197
HpyF3I	CTNAG	1 cut(s)	52
HpySE526I	ACGT	3 cut(s)	520, 1114, 1197
HspAI	GCGC	4 cut(s)	506, 706, 865, 1419
Ksp22I	TGATCA	1 cut(s)	661
LguI	GCTCTTC	1 cut(s)	1422
LmnI	GCTCC	5 cut(s)	4, 310, 810, 1063, 1610
Lsp1109I	GCAGC	4 cut(s)	631, 653, 874, 1752
LweI	GCATC	4 cut(s)	205, 275, 1082, 1337
MabI	ACCWGGT	2 cut(s)	934, 1648
MaeII	ACGT	3 cut(s)	520, 1114, 1197
MaeIII	GTNAC	5 cut(s)	190, 556, 785, 881, 968
MboII	GAAGA	4 cut(s)	267, 1439, 1542, 1711
MflI	RGATCY	3 cut(s)	199, 1006, 1559
MhlI	GDGCHC	5 cut(s)	53, 64, 278, 943, 1068
MlsI	TGGCCA	2 cut(s)	751, 1497
MluCI	AATT	7 cut(s)	461, 471, 478, 1046, 1318, 1577, 1691
MluNI	TGGCCA	2 cut(s)	751, 1497
MlyI	GAGTC	3 cut(s)	122, 252, 1666
MmeI	TCCRAC	3 cut(s)	217, 1585, 1634
MnlI	CCTC	7 cut(s)	145, 169, 1278, 1282, 1406, 1601, 1727
Mox20I	TGGCCA	2 cut(s)	751, 1497
Mph1103I	ATGCAT	1 cut(s)	268
MroXI	GAANNNNTTC	2 cut(s)	591, 1153
MscI	TGGCCA	2 cut(s)	751, 1497
MseI	TTAA	2 cut(s)	974, 1581
MslI	CAYNNNNRTG	4 cut(s)	271, 313, 1113, 1509
Msp20I	TGGCCA	2 cut(s)	751, 1497
MspA1I	CMGCKG	1 cut(s)	644
MspI	CCGG	1 cut(s)	375
MspR9I	CCNGG	6 cut(s)	252, 360, 714, 846, 936, 1650
Mva1269I	GAATGC	1 cut(s)	1700
MvaI	CCWGG	6 cut(s)	252, 360, 714, 846, 936, 1650
MvnI	CGCG	2 cut(s)	708, 867
NdeI	CATATG	1 cut(s)	1015
NlaIV	GGNNCC	3 cut(s)	1043, 1065, 1135
NmeAIII	GCCGAG	1 cut(s)	110
NmuCI	GTSAC	3 cut(s)	190, 881, 968
NsiI	ATGCAT	1 cut(s)	268
NspI	RCATGY	1 cut(s)	1524
NspV	TTCGAA	1 cut(s)	628
PagI	TCATGA	3 cut(s)	124, 1108, 1672
PaqCI	CACCTGC	1 cut(s)	694
PciSI	GCTCTTC	1 cut(s)	1422
PcsI	WCGNNNNNNNCGW	2 cut(s)	582, 1815
PctI	GAATGC	1 cut(s)	1700
PdmI	GAANNNNTTC	2 cut(s)	591, 1153
PfeI	GAWTC	5 cut(s)	28, 854, 1127, 1154, 1760
PflMI	CCANNNNNTGG	2 cut(s)	287, 845
PfoI	TCCNGGA	2 cut(s)	250, 844
PkrI	GCNGC	5 cut(s)	643, 646, 864, 1742, 1834
PleI	GAGTC	3 cut(s)	122, 252, 1665
PpsI	GAGTC	3 cut(s)	122, 252, 1665
PpuMI	RGGWCCY	1 cut(s)	1134
PsiI	TTATAA	1 cut(s)	404
Psp5II	RGGWCCY	1 cut(s)	1134
Psp6I	CCWGG	6 cut(s)	250, 358, 712, 844, 934, 1648
PspGI	CCWGG	6 cut(s)	250, 358, 712, 844, 934, 1648
PspN4I	GGNNCC	3 cut(s)	1043, 1065, 1135
PspPI	GGNCC	2 cut(s)	1042, 1134
PspPPI	RGGWCCY	1 cut(s)	1134
PstI	CTGCAG	1 cut(s)	643
PsuI	RGATCY	3 cut(s)	199, 1006, 1559
PvuII	CAGCTG	1 cut(s)	644
RsaI	GTAC	8 cut(s)	209, 335, 764, 920, 1229, 1304, 1472, 1730
RsaNI	GTAC	8 cut(s)	208, 334, 763, 919, 1228, 1303, 1471, 1729
RseI	CAYNNNNRTG	4 cut(s)	271, 313, 1113, 1509
SapI	GCTCTTC	1 cut(s)	1422
SaqAI	TTAA	2 cut(s)	974, 1581
SatI	GCNGC	5 cut(s)	642, 645, 863, 1741, 1833
Sau96I	GGNCC	2 cut(s)	1042, 1134
SchI	GAGTC	3 cut(s)	122, 252, 1666
ScrFI	CCNGG	6 cut(s)	252, 360, 714, 846, 936, 1650
SduI	GDGCHC	5 cut(s)	53, 64, 278, 943, 1068
SexAI	ACCWGGT	2 cut(s)	934, 1648
SfaNI	GCATC	4 cut(s)	205, 275, 1082, 1337
SfcI	CTRYAG	5 cut(s)	639, 769, 951, 1233, 1663
SfuI	TTCGAA	1 cut(s)	628
SinI	GGWCC	2 cut(s)	1042, 1134
SmiMI	CAYNNNNRTG	4 cut(s)	271, 313, 1113, 1509
SmlI	CTYRAG	1 cut(s)	528
SmoI	CTYRAG	1 cut(s)	528
Sse9I	AATT	7 cut(s)	461, 471, 478, 1046, 1318, 1577, 1691
SsiI	CCGC	1 cut(s)	444
SspI	AATATT	3 cut(s)	12, 876, 1223
StyD4I	CCNGG	6 cut(s)	250, 358, 712, 844, 934, 1648
StyI	CCWWGG	2 cut(s)	1352, 1381
TaaI	ACNGT	7 cut(s)	196, 273, 556, 697, 923, 1081, 1814
TaiI	ACGT	3 cut(s)	523, 1117, 1200
TaqI	TCGA	4 cut(s)	16, 628, 1213, 1411
TasI	AATT	7 cut(s)	461, 471, 478, 1046, 1318, 1577, 1691
TatI	WGTACW	6 cut(s)	333, 762, 918, 1302, 1470, 1728
TfiI	GAWTC	5 cut(s)	28, 854, 1127, 1154, 1760
Tru1I	TTAA	2 cut(s)	974, 1581
Tru9I	TTAA	2 cut(s)	974, 1581
TscAI	CASTG	5 cut(s)	278, 325, 928, 973, 1105
TseFI	GTSAC	3 cut(s)	190, 881, 968
TseI	GCWGC	5 cut(s)	641, 644, 862, 1740, 1832
Tsp45I	GTSAC	3 cut(s)	190, 881, 968
TspDTI	ATGAA	7 cut(s)	113, 629, 709, 986, 1125, 1300, 1527
TspGWI	ACGGA	3 cut(s)	1074, 1161, 1321
TspRI	CASTG	5 cut(s)	278, 325, 928, 973, 1105
Van91I	CCANNNNNTGG	2 cut(s)	287, 845
VpaK11BI	GGWCC	2 cut(s)	1042, 1134
XapI	RAATTY	2 cut(s)	478, 1577
XceI	RCATGY	1 cut(s)	1524
XcmI	CCANNNNNNNNNTGG	2 cut(s)	603, 1601
XmiI	GTMKAC	2 cut(s)	819, 1479
XmnI	GAANNNNTTC	2 cut(s)	591, 1153
Zsp2I	ATGCAT	1 cut(s)	268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.