Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001396

Physical Location & Seq

Genomic Coordinates Forward (+)

8205756 .. 8209068

Gene Structure 3313 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0104300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGACGACGACGACGACGAGCATAGCGGCCGCCGCGGGCGGGGGTGGAGGCGAGGATCGGGTGCTGGCGGCGGCGCAGCATATCGTGAAGAGCCTGGGGAACACTCCGAAGGAGGTGAGGGAGGATATGCTGTTGATCTTCTCCAGCTTTGATAACCGGCTCTCGAATTTGACGAGTATGATCAGCGACGAATCGAAGGCGGACGACGACCGATTCGACGCCGCGGAGAAGGTGATTTTCCGGTGGGAGACGAATCACGACGCGATGAGGAGCGGCGTGCCTTGGGAGGAGTCGCCGAACGAGTCGGCGGAGTATTTGTTGGCCGTGGACGAGATCCTCAGCCTCATGGAGGGGTTGTCGGTCGGGTCGGATCATGAGATTTCGGACCGGGCCGAGAACGCGATCCAAATCGCGATGTCGAGGCTGGAGGACGAGTTCCGCCACATTCTGATCCGGAACACCGTCCCGCTCGACTCCGAGCGCCTCTACGGCTCGATCCGGCGGGTCTCGCTGTCGTTCGCGTCGCACGACGGTGATTTCGCCGAGGAGTTCGAGAGCTTCGGCGAGATGGACCGCGACGCCGGCAGGTTCCACGAGCGCGGCGGCAGCTTAGGCGATGACGTGTGCGTTGATTTGATACATCCGGATGCCGTCGTCGAATTGAAGGAGATCGCTTACCGTATGATTCGCTCCGGCTATGAGAAGGAGTGTGTTCAGGTGTACAGTAGTGTCCGGCGAGACGCTTTGGATGAGTGTCTGGTGATTCTCGGAGTTGAGAAGCTGAGCATTGAGGAGGTTCAGAAAATCGAGTGGAAATTGCTGGACGAGAAAATGAAGAAGTGGATACACGCTGTGAAAATCGGGGTTAGGGTTTTATTGTTCGGGGAGAGGAGACTCTCCGATCAGATTTTCGAGGGAACGGATGAGACTAGGGAGATATGTTTCAATGAGACCACCAAGGGGTGCATTATGCAGCTGTTGAATTTCGGAGAGGCTGTTGCCATTGGGAAAAGGTCGCCGGAGAAGCTGTTTCGGATTCTGGACATGTATGATGTGCTGGCAGATGTGTATCCGGACTTGGAGCAGATGGTGAGTGATGAATTTGTGCTTGCTGAGGCAAAGGGAGTGTTGGATGGACTCGGTGATGCGGCTAGAGGGACCTTTGCTGAGTTTGAGAATGCCGTTCAGGGTGAGGCCAGTAAGAAACCAATGCTGAGTGGAGAGATTCATCCCATTTCGCGGTATGTCATGAACTATGTGAGATTGCTGGTTGATTATAGTGAAACTCTGAATTTGCTTTTAGATACCGGAGATGATGAGTTACAGGGTTTGCCAAATGATGATTTGGGAATAGAAAGTATGTCTCCGATAGGACGTAGGCTTTTGCTGTTGATAAATAATTTGGAGTCCAATCTTGGGGAGAAATCTAAGGTTTATGAGGATGGAGCACTCCAATGTGTGTTTATGATGAATAACATTCAATACATAGTGCAGAAAGTGAAAGATTCTGAGCTTAGAAAGCTCTTGGGAGACAATTGGGTTCGCAAACGCCGTGGCCAGGTGCGCCAGTATGCTACTGGTTATCTTAGAGCTGCTTGGAGCAAGGCCCTGTCATGTTTGAAAGATGAAGGAATTGGCGGCAGCACAAGCAATGCTTCAAAGATGGCTTTGAAGGAGAGGTTTAAGAATTTCAATGCCAACTTTGAAGACCTGTATAGAACCCAGACAGCTTGGAAGGTCCCCGATGCCCAGCTTCGCGAAGAGCTTCGGATATCTATATCAGAGAAGGTGATTCCTGCTTACCGGTCCTTTATGGGGAGGTTCGGGAATCAGCTAGAGAGTGGAAGGCATGCCGGGAAATATATAAAGTACACCGCAGATGATTTGGAGAGCTATGTGTTGGATTTGTTCGAAGGGACACCTTGTGTTCTGCACCATCTTAGAAGAAAAAGTACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

652

Amino Acids

73.56

Weight (kDa)

4.99

Isoelectric Point (pI)

37.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo70_N	PF20669	72 - 151	2.9e-13	Exocyst complex component Exo70 N-terminal
Exo70_C	PF03081	279 - 634	3.5e-128	Exo70 exocyst complex subunit C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001396)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020 AT4G18020
fragaria_vesca	FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280 FvH4_5g21280
malus_domestica	MD06G1039500.v1.1 MD16G1269900.v1.1
prunus_persica	Prupe.5G045000_v2.0.a1 Prupe.5G045000_v2.0.a1 Prupe.5G045000_v2.0.a1
pyrus_communis	pycom06g03320 pycom16g23910
rosa_chinensis	RchiOBHm_Chr7g0208371
rosa_laevigata	RLG00000003216
rosa_multiflora	Rmu_co8240673.1_g000001 Rmu_ssc0000063.1_g000009
rosa_roxburghii	Rroxscaffold_3G00250510
rosa_rugosa	Rorug07G0104000 Rorug07G0104100 Rorug07G0104200 Rorug07G0104200 Rorug07G0104200 Rorug07G0104300
rosa_samantha	Rh7AG238600 Rh7BG234000 Rh7CG253900 Rh7DG244200
rosa_wichuraiana	Rw7G020320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	576
AccBSI	CCGCTC	2 cut(s)	273, 469
AccIII	TCCGGA	3 cut(s)	453, 643, 1072
AclWI	GGATC	6 cut(s)	63, 328, 378, 397, 445, 490
AcoI	YGGCCR	3 cut(s)	27, 321, 1555
AcsI	RAATTY	5 cut(s)	166, 982, 1100, 1291, 1687
AcyI	GRCGYC	2 cut(s)	219, 579
AdeI	CACNNNGTG	2 cut(s)	853, 1925
AfaI	GTAC	3 cut(s)	722, 1871, 1954
AfiI	CCNNNNNNNGG	7 cut(s)	39, 349, 960, 1239, 1416, 1558, 1815
AflIII	ACRYGT	2 cut(s)	621, 1044
AgeI	ACCGGT	1 cut(s)	1803
AgsI	TTSAA	9 cut(s)	664, 946, 982, 1481, 1621, 1659, 1672, 1693, 1706
AjiI	CACGTC	1 cut(s)	622
AjnI	CCWGG	2 cut(s)	93, 1557
AleI	CACNNNNGTG	1 cut(s)	531
AloI	GAACNNNNNNTCC	2 cut(s)	419, 451
Alw21I	GWGCWC	1 cut(s)	1450
Alw26I	GTCTC	8 cut(s)	242, 511, 732, 886, 920, 944, 1368, 1524
AlwI	GGATC	6 cut(s)	63, 328, 378, 397, 445, 490
Aor13HI	TCCGGA	3 cut(s)	453, 643, 1072
AoxI	GGCC	6 cut(s)	27, 321, 390, 1194, 1555, 1605
ApeKI	GCWGC	5 cut(s)	76, 606, 973, 1592, 1641
ApoI	RAATTY	5 cut(s)	166, 982, 1100, 1291, 1687
ArsI	GACNNNNNNTTYG	4 cut(s)	197, 229, 521, 553
AsiGI	ACCGGT	1 cut(s)	1803
Asp700I	GAANNNNTTC	1 cut(s)	1764
AspLEI	GCGC	4 cut(s)	76, 483, 600, 1566
AspS9I	GGNCC	7 cut(s)	385, 390, 571, 1158, 1606, 1738, 1806
AsuC2I	CCSGG	2 cut(s)	389, 1855
AsuHPI	GGTGA	8 cut(s)	127, 244, 545, 772, 1102, 1154, 1202, 1801
AsuII	TTCGAA	1 cut(s)	1911
AvaII	GGWCC	5 cut(s)	385, 571, 1158, 1738, 1806
BalI	TGGCCA	1 cut(s)	1557
BarI	GAAGNNNNNNTAC	1 cut(s)	1936
BauI	CACGAG	1 cut(s)	593
BbsI	GAAGAC	1 cut(s)	1713
Bbv12I	GWGCWC	1 cut(s)	1450
BbvCI	CCTCAGC	2 cut(s)	338, 1113
BbvI	GCAGC	5 cut(s)	88, 618, 985, 1579, 1653
BccI	CCATC	6 cut(s)	562, 1081, 1127, 1436, 1657, 1944
BceAI	ACGGC	5 cut(s)	308, 505, 635, 1166, 1536
BciT130I	CCWGG	2 cut(s)	95, 1559
BciVI	GTATCC	2 cut(s)	837, 1080
BclI	TGATCA	1 cut(s)	180
BcnI	CCSGG	2 cut(s)	389, 1855
BcoDI	GTCTC	8 cut(s)	242, 511, 732, 886, 920, 944, 1368, 1524
BfaI	CTAG	3 cut(s)	930, 1152, 1835
BfoI	RGCGCY	1 cut(s)	484
BfuAI	ACCTGC	1 cut(s)	576
BfuI	GTATCC	2 cut(s)	837, 1080
BglI	GCCNNNNNGGC	1 cut(s)	489
BlpI	GCTNAGC	1 cut(s)	782
Bme1390I	CCNGG	4 cut(s)	95, 389, 1559, 1855
Bme18I	GGWCC	5 cut(s)	385, 571, 1158, 1738, 1806
BmgBI	CACGTC	1 cut(s)	622
BmgT120I	GGNCC	7 cut(s)	385, 390, 571, 1158, 1606, 1738, 1806
BmiI	GGNNCC	3 cut(s)	590, 1159, 1740
BmrFI	CCNGG	4 cut(s)	95, 389, 1559, 1855
BmsI	GCATC	3 cut(s)	637, 1135, 1735
BpiI	GAAGAC	1 cut(s)	1713
BpmI	CTGGAG	2 cut(s)	127, 446
Bpu10I	CCTNAGC	3 cut(s)	338, 610, 1113
Bpu1102I	GCTNAGC	1 cut(s)	782
Bpu14I	TTCGAA	1 cut(s)	1911
BpuMI	CCSGG	2 cut(s)	389, 1855
BsaBI	GATNNNNATC	2 cut(s)	407, 1068
BsaHI	GRCGYC	2 cut(s)	219, 579
BsaI	GGTCTC	2 cut(s)	511, 944
BsaJI	CCNNGG	8 cut(s)	33, 94, 222, 281, 324, 543, 957, 1552
BsaWI	WCCGGW	6 cut(s)	240, 453, 643, 1072, 1307, 1803
Bsc4I	CCNNNNNNNGG	7 cut(s)	39, 349, 960, 1239, 1416, 1558, 1815
Bse118I	RCCGGY	3 cut(s)	156, 581, 1803
Bse1I	ACTGG	3 cut(s)	1197, 1567, 1582
Bse3DI	GCAATG	1 cut(s)	1657
Bse8I	GATNNNNATC	2 cut(s)	407, 1068
BseAI	TCCGGA	3 cut(s)	453, 643, 1072
BseBI	CCWGG	2 cut(s)	95, 1559
BseDI	CCNNGG	8 cut(s)	33, 94, 222, 281, 324, 543, 957, 1552
BseGI	GGATG	7 cut(s)	640, 652, 754, 928, 1138, 1228, 1447
BseJI	GATNNNNATC	2 cut(s)	407, 1068
BseLI	CCNNNNNNNGG	7 cut(s)	39, 349, 960, 1239, 1416, 1558, 1815
BseMI	GCAATG	1 cut(s)	1657
BseMII	CTCAG	6 cut(s)	352, 773, 1104, 1158, 1205, 1500
BseNI	ACTGG	3 cut(s)	1197, 1567, 1582
BseRI	GAGGAG	5 cut(s)	283, 302, 560, 806, 904
BseX3I	CGGCCG	1 cut(s)	27
BseXI	GCAGC	5 cut(s)	88, 618, 985, 1579, 1653
BseYI	CCCAGC	1 cut(s)	1749
BsgI	GTGCAG	2 cut(s)	1511, 1916
Bsh1285I	CGRYCG	3 cut(s)	30, 211, 363
BshFI	GGCC	6 cut(s)	29, 323, 392, 1196, 1557, 1607
BshTI	ACCGGT	1 cut(s)	1803
BsiEI	CGRYCG	3 cut(s)	30, 211, 363
BsiHKAI	GWGCWC	1 cut(s)	1450
BslFI	GGGAC	4 cut(s)	449, 1171, 1724, 1930
BslI	CCNNNNNNNGG	7 cut(s)	39, 349, 960, 1239, 1416, 1558, 1815
BsmAI	GTCTC	8 cut(s)	242, 511, 732, 886, 920, 944, 1368, 1524
BsmBI	CGTCTC	2 cut(s)	242, 732
BsmFI	GGGAC	4 cut(s)	449, 1171, 1724, 1930
BsmI	GAATGC	1 cut(s)	1183
BsnI	GGCC	6 cut(s)	29, 323, 392, 1196, 1557, 1607
Bso31I	GGTCTC	2 cut(s)	511, 944
Bsp119I	TTCGAA	1 cut(s)	1911
Bsp1286I	GDGCHC	1 cut(s)	1450
Bsp13I	TCCGGA	3 cut(s)	453, 643, 1072
Bsp1407I	TGTACA	1 cut(s)	720
Bsp1720I	GCTNAGC	1 cut(s)	782
Bsp68I	TCGCGA	2 cut(s)	413, 1758
BspANI	GGCC	6 cut(s)	29, 323, 392, 1196, 1557, 1607
BspCNI	CTCAG	6 cut(s)	351, 774, 1105, 1159, 1206, 1501
BspEI	TCCGGA	3 cut(s)	453, 643, 1072
BspHI	TCATGA	2 cut(s)	373, 1248
BspLI	GGNNCC	3 cut(s)	590, 1159, 1740
BspMI	ACCTGC	1 cut(s)	576
BspPI	GGATC	6 cut(s)	63, 328, 378, 397, 445, 490
BspQI	GCTCTTC	2 cut(s)	83, 1755
BspT104I	TTCGAA	1 cut(s)	1911
BspTNI	GGTCTC	2 cut(s)	511, 944
BsrBI	CCGCTC	2 cut(s)	273, 469
BsrDI	GCAATG	1 cut(s)	1657
BsrFI	RCCGGY	3 cut(s)	156, 581, 1803
BsrGI	TGTACA	1 cut(s)	720
BsrI	ACTGG	3 cut(s)	1197, 1567, 1582
BssAI	RCCGGY	3 cut(s)	156, 581, 1803
BssECI	CCNNGG	8 cut(s)	33, 94, 222, 281, 324, 543, 957, 1552
BssNI	GRCGYC	2 cut(s)	219, 579
BssSI	CACGAG	1 cut(s)	593
BssT1I	CCWWGG	2 cut(s)	281, 957
Bst2BI	CACGAG	1 cut(s)	593
Bst2UI	CCWGG	2 cut(s)	95, 1559
Bst4CI	ACNGT	4 cut(s)	463, 533, 680, 725
Bst6I	CTCTTC	2 cut(s)	83, 1755
BstACI	GRCGYC	2 cut(s)	219, 579
BstAUI	TGTACA	1 cut(s)	720
BstBI	TTCGAA	1 cut(s)	1911
BstC8I	GCNNGC	7 cut(s)	37, 66, 278, 583, 1059, 1110, 1851
BstDSI	CCRYGG	4 cut(s)	33, 222, 324, 1552
BstENI	CCTNNNNNAGG	1 cut(s)	347
BstF5I	GGATG	7 cut(s)	640, 652, 754, 928, 1138, 1228, 1447
BstH2I	RGCGCY	1 cut(s)	484
BstHHI	GCGC	4 cut(s)	76, 483, 600, 1566
BstMAI	GTCTC	8 cut(s)	242, 511, 732, 886, 920, 944, 1368, 1524
BstMCI	CGRYCG	3 cut(s)	30, 211, 363
BstNI	CCWGG	2 cut(s)	95, 1559
BstNSI	RCATGY	2 cut(s)	1048, 1853
BstSCI	CCNGG	4 cut(s)	93, 387, 1557, 1853
BstV1I	GCAGC	5 cut(s)	88, 618, 985, 1579, 1653
BstV2I	GAAGAC	1 cut(s)	1713
BstX2I	RGATCY	1 cut(s)	333
BstYI	RGATCY	1 cut(s)	333
BstZI	CGGCCG	1 cut(s)	27
BsuI	GTATCC	2 cut(s)	837, 1080
BsuRI	GGCC	6 cut(s)	29, 323, 392, 1196, 1557, 1607
BtgI	CCRYGG	4 cut(s)	33, 222, 324, 1552
BtgZI	GCGATG	3 cut(s)	278, 428, 630
BtrI	CACGTC	1 cut(s)	622
BtsCI	GGATG	7 cut(s)	640, 652, 754, 928, 1138, 1228, 1447
BtuMI	TCGCGA	2 cut(s)	413, 1758
BveI	ACCTGC	1 cut(s)	576
Cac8I	GCNNGC	7 cut(s)	37, 66, 278, 583, 1059, 1110, 1851
CciI	TCATGA	2 cut(s)	373, 1248
CciNI	GCGGCCGC	1 cut(s)	27
CfoI	GCGC	4 cut(s)	76, 483, 600, 1566
Cfr10I	RCCGGY	3 cut(s)	156, 581, 1803
Cfr13I	GGNCC	7 cut(s)	385, 390, 571, 1158, 1606, 1738, 1806
Cfr42I	CCGCGG	2 cut(s)	36, 225
CpoI	CGGWCCG	1 cut(s)	385
CseI	GACGC	5 cut(s)	227, 269, 510, 587, 749
Csp6I	GTAC	3 cut(s)	721, 1870, 1953
CspAI	ACCGGT	1 cut(s)	1803
CspCI	CAANNNNNGTGG	2 cut(s)	1534, 1569
CspI	CGGWCCG	1 cut(s)	385
CviAII	CATG	6 cut(s)	346, 374, 1045, 1249, 1614, 1850
CviQI	GTAC	3 cut(s)	721, 1870, 1953
DraIII	CACNNNGTG	2 cut(s)	853, 1925
EaeI	YGGCCR	3 cut(s)	27, 321, 1555
EagI	CGGCCG	1 cut(s)	27
Eam1104I	CTCTTC	2 cut(s)	83, 1755
EarI	CTCTTC	2 cut(s)	83, 1755
EciI	GGCGGA	3 cut(s)	215, 323, 428
EclXI	CGGCCG	1 cut(s)	27
Eco130I	CCWWGG	2 cut(s)	281, 957
Eco31I	GGTCTC	2 cut(s)	511, 944
Eco32I	GATATC	1 cut(s)	1773
Eco47I	GGWCC	5 cut(s)	385, 571, 1158, 1738, 1806
Eco52I	CGGCCG	1 cut(s)	27
EcoNI	CCTNNNNNAGG	1 cut(s)	347
EcoO109I	RGGNCCY	3 cut(s)	1158, 1606, 1738
EcoRII	CCWGG	2 cut(s)	93, 1557
EcoRV	GATATC	1 cut(s)	1773
EcoT14I	CCWWGG	2 cut(s)	281, 957
ErhI	CCWWGG	2 cut(s)	281, 957
Esp3I	CGTCTC	2 cut(s)	242, 732
FaeI	CATG	6 cut(s)	349, 377, 1048, 1252, 1617, 1853
FalI	AAGNNNNNCTT	2 cut(s)	1639, 1671
FaqI	GGGAC	4 cut(s)	449, 1171, 1724, 1930
FatI	CATG	6 cut(s)	345, 373, 1044, 1248, 1613, 1849
FauI	CCCGC	4 cut(s)	28, 32, 474, 495
FbaI	TGATCA	1 cut(s)	180
FokI	GGATG	7 cut(s)	627, 659, 761, 935, 1145, 1215, 1454
FspBI	CTAG	3 cut(s)	930, 1152, 1835
GlaI	GCGC	4 cut(s)	75, 482, 599, 1565
GsaI	CCCAGC	1 cut(s)	1753
GsuI	CTGGAG	2 cut(s)	127, 446
HaeII	RGCGCY	1 cut(s)	484
HaeIII	GGCC	6 cut(s)	29, 323, 392, 1196, 1557, 1607
HgaI	GACGC	5 cut(s)	227, 269, 510, 587, 749
HhaI	GCGC	4 cut(s)	76, 483, 600, 1566
Hin1I	GRCGYC	2 cut(s)	219, 579
Hin1II	CATG	6 cut(s)	349, 377, 1048, 1252, 1617, 1853
Hin6I	GCGC	4 cut(s)	74, 481, 598, 1564
HinP1I	GCGC	4 cut(s)	74, 481, 598, 1564
HphI	GGTGA	8 cut(s)	127, 244, 545, 772, 1102, 1154, 1202, 1801
Hpy166II	GTNNAC	3 cut(s)	328, 721, 1872
Hpy8I	GTNNAC	3 cut(s)	328, 721, 1872
HpyCH4III	ACNGT	4 cut(s)	463, 533, 680, 725
HpyCH4IV	ACGT	2 cut(s)	621, 1375
HpyCH4V	TGCA	4 cut(s)	966, 973, 1492, 1933
HpySE526I	ACGT	2 cut(s)	621, 1375
Hsp92I	GRCGYC	2 cut(s)	219, 579
Hsp92II	CATG	6 cut(s)	349, 377, 1048, 1252, 1617, 1853
HspAI	GCGC	4 cut(s)	74, 481, 598, 1564
Kpn2I	TCCGGA	3 cut(s)	453, 643, 1072
KroI	GCCGGC	1 cut(s)	581
KroNI	GCCGGC	1 cut(s)	583
Ksp22I	TGATCA	1 cut(s)	180
KspI	CCGCGG	2 cut(s)	36, 225
LguI	GCTCTTC	2 cut(s)	83, 1755
LmnI	GCTCC	5 cut(s)	270, 695, 1081, 1445, 1599
Lsp1109I	GCAGC	5 cut(s)	88, 618, 985, 1579, 1653
LweI	GCATC	3 cut(s)	637, 1135, 1735
MaeI	CTAG	3 cut(s)	930, 1152, 1835
MaeII	ACGT	2 cut(s)	621, 1375
MaeIII	GTNAC	1 cut(s)	1320
MbiI	CCGCTC	2 cut(s)	273, 469
MboII	GAAGA	6 cut(s)	100, 130, 847, 1718, 1772, 1956
MfeI	CAATTG	1 cut(s)	1534
MflI	RGATCY	1 cut(s)	333
MhlI	GDGCHC	1 cut(s)	1450
MlsI	TGGCCA	1 cut(s)	1557
MluNI	TGGCCA	1 cut(s)	1557
MlyI	GAGTC	6 cut(s)	299, 311, 467, 888, 1131, 1415
MmeI	TCCRAC	3 cut(s)	348, 1110, 1881
Mox20I	TGGCCA	1 cut(s)	1557
MroI	TCCGGA	3 cut(s)	453, 643, 1072
MroNI	GCCGGC	1 cut(s)	581
MroXI	GAANNNNTTC	1 cut(s)	1764
MscI	TGGCCA	1 cut(s)	1557
MseI	TTAA	1 cut(s)	1683
MslI	CAYNNNNRTG	3 cut(s)	531, 645, 1453
Msp20I	TGGCCA	1 cut(s)	1557
MspA1I	CMGCKG	3 cut(s)	35, 224, 976
MspR9I	CCNGG	4 cut(s)	95, 389, 1559, 1855
MunI	CAATTG	1 cut(s)	1534
Mva1269I	GAATGC	1 cut(s)	1183
MvaI	CCWGG	2 cut(s)	95, 1559
NaeI	GCCGGC	1 cut(s)	583
NciI	CCSGG	2 cut(s)	389, 1855
NgoMIV	GCCGGC	1 cut(s)	581
NlaIII	CATG	6 cut(s)	349, 377, 1048, 1252, 1617, 1853
NlaIV	GGNNCC	3 cut(s)	590, 1159, 1740
NmeAIII	GCCGAG	2 cut(s)	418, 568
NotI	GCGGCCGC	1 cut(s)	27
NruI	TCGCGA	2 cut(s)	413, 1758
NspI	RCATGY	2 cut(s)	1048, 1853
NspV	TTCGAA	1 cut(s)	1911
OliI	CACNNNNGTG	1 cut(s)	531
PaeI	GCATGC	1 cut(s)	1853
PagI	TCATGA	2 cut(s)	373, 1248
PciI	ACATGT	1 cut(s)	1044
PciSI	GCTCTTC	2 cut(s)	83, 1755
PcsI	WCGNNNNNNNCGW	6 cut(s)	11, 14, 170, 213, 525, 1549
PctI	GAATGC	1 cut(s)	1183
PdiI	GCCGGC	1 cut(s)	583
PdmI	GAANNNNTTC	1 cut(s)	1764
PinAI	ACCGGT	1 cut(s)	1803
PleI	GAGTC	6 cut(s)	298, 310, 467, 888, 1131, 1414
PpsI	GAGTC	6 cut(s)	298, 310, 467, 888, 1131, 1414
PpuMI	RGGWCCY	2 cut(s)	1158, 1738
PscI	ACATGT	1 cut(s)	1044
Psp5II	RGGWCCY	2 cut(s)	1158, 1738
Psp6I	CCWGG	2 cut(s)	93, 1557
PspFI	CCCAGC	1 cut(s)	1749
PspGI	CCWGG	2 cut(s)	93, 1557
PspN4I	GGNNCC	3 cut(s)	590, 1159, 1740
PspPI	GGNCC	7 cut(s)	385, 390, 571, 1158, 1606, 1738, 1806
PspPPI	RGGWCCY	2 cut(s)	1158, 1738
PsuI	RGATCY	1 cut(s)	333
PvuII	CAGCTG	1 cut(s)	976
RruI	TCGCGA	2 cut(s)	413, 1758
RsaI	GTAC	3 cut(s)	722, 1871, 1954
RsaNI	GTAC	3 cut(s)	721, 1870, 1953
RseI	CAYNNNNRTG	3 cut(s)	531, 645, 1453
Rsr2I	CGGWCCG	1 cut(s)	385
RsrII	CGGWCCG	1 cut(s)	385
SacII	CCGCGG	2 cut(s)	36, 225
SapI	GCTCTTC	2 cut(s)	83, 1755
SaqAI	TTAA	1 cut(s)	1683
Sau96I	GGNCC	7 cut(s)	385, 390, 571, 1158, 1606, 1738, 1806
SchI	GAGTC	6 cut(s)	299, 311, 467, 888, 1131, 1415
ScrFI	CCNGG	4 cut(s)	95, 389, 1559, 1855
SduI	GDGCHC	1 cut(s)	1450
SfaNI	GCATC	3 cut(s)	637, 1135, 1735
Sfr303I	CCGCGG	2 cut(s)	36, 225
SfuI	TTCGAA	1 cut(s)	1911
SgrBI	CCGCGG	2 cut(s)	36, 225
SinI	GGWCC	5 cut(s)	385, 571, 1158, 1738, 1806
SmiMI	CAYNNNNRTG	3 cut(s)	531, 645, 1453
SphI	GCATGC	1 cut(s)	1853
SspMI	CTAG	3 cut(s)	930, 1152, 1835
StyD4I	CCNGG	4 cut(s)	93, 387, 1557, 1853
StyI	CCWWGG	2 cut(s)	281, 957
TaaI	ACNGT	4 cut(s)	463, 533, 680, 725
TaiI	ACGT	2 cut(s)	624, 1378
TaqII	GACCGA	2 cut(s)	225, 349
TatI	WGTACW	3 cut(s)	720, 1869, 1952
Tru1I	TTAA	1 cut(s)	1683
Tru9I	TTAA	1 cut(s)	1683
TseI	GCWGC	5 cut(s)	76, 606, 973, 1592, 1641
TspDTI	ATGAA	6 cut(s)	848, 1113, 1217, 1265, 1484, 1641
TspGWI	ACGGA	1 cut(s)	935
VpaK11BI	GGWCC	5 cut(s)	385, 571, 1158, 1738, 1806
XagI	CCTNNNNNAGG	1 cut(s)	347
XapI	RAATTY	5 cut(s)	166, 982, 1100, 1291, 1687
XceI	RCATGY	2 cut(s)	1048, 1853
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1574
XmnI	GAANNNNTTC	1 cut(s)	1764
XspI	CTAG	3 cut(s)	930, 1152, 1835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.