MD06G1116600.v1.1
ERF Family

eukaryotic peptide chain release factor subunit

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
25595863 .. 25596057
195 bp
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UTR
Exon/CDS
Intron
MD06G1116600.v1.1.491

Sequence Viewer

Length: 195 bp
ATGGAGGAGACAGGAGAGGATGGTTTCGATCAAGCTATTAAGTTGTCTGCGGAGTATCTATCCAATATGAAATTTATACAGGAGCATAACTTGCTAGGAAAATACTTTGAGGAGGTTAGCCAGGGTGTAGATGGCATGCTAAAGGCTTTGGAGATGGAAGCGATTAAGACACTTATTTGTGTGGGAAAATCTTAA

Protein Analysis

65

Amino Acids

7.16

Weight (kDa)

4.51

Isoelectric Point (pI)

18.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 50
AcsI RAATTY 1 cut(s) 71
AjnI CCWGG 1 cut(s) 120
AluBI AGCT 1 cut(s) 35
AluI AGCT 1 cut(s) 35
Alw26I GTCTC 1 cut(s) 2
ApoI RAATTY 1 cut(s) 71
BccI CCATC 3 cut(s) 14, 125, 148
BciT130I CCWGG 1 cut(s) 122
BcoDI GTCTC 1 cut(s) 2
BfaI CTAG 1 cut(s) 95
Bme1390I CCNGG 1 cut(s) 122
BmrFI CCNGG 1 cut(s) 122
BsaJI CCNNGG 1 cut(s) 121
BseBI CCWGG 1 cut(s) 122
BseDI CCNNGG 1 cut(s) 121
BseGI GGATG 1 cut(s) 25
BseRI GAGGAG 2 cut(s) 20, 125
BsmAI GTCTC 1 cut(s) 2
Bsp143I GATC 1 cut(s) 28
BspACI CCGC 1 cut(s) 50
BssECI CCNNGG 1 cut(s) 121
BssMI GATC 1 cut(s) 28
Bst2UI CCWGG 1 cut(s) 122
BstAPI GCANNNNNTGC 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 137
BstF5I GGATG 1 cut(s) 25
BstKTI GATC 1 cut(s) 31
BstMAI GTCTC 1 cut(s) 2
BstMBI GATC 1 cut(s) 28
BstMWI GCNNNNNNNGC 1 cut(s) 91
BstNI CCWGG 1 cut(s) 122
BstNSI RCATGY 1 cut(s) 139
BstSCI CCNGG 1 cut(s) 120
BtsCI GGATG 1 cut(s) 25
Cac8I GCNNGC 1 cut(s) 137
CviAII CATG 1 cut(s) 136
CviJI RGCY 3 cut(s) 35, 120, 146
CviKI_1 RGCY 3 cut(s) 35, 120, 146
DpnI GATC 1 cut(s) 30
DpnII GATC 1 cut(s) 28
EcoRII CCWGG 1 cut(s) 120
FaeI CATG 1 cut(s) 139
FaiI YATR 4 cut(s) 68, 77, 87, 137
FatI CATG 1 cut(s) 135
FokI GGATG 1 cut(s) 32
FspBI CTAG 1 cut(s) 95
Hin1II CATG 1 cut(s) 139
HpyF10VI GCNNNNNNNGC 1 cut(s) 91
Hsp92II CATG 1 cut(s) 139
Kzo9I GATC 1 cut(s) 28
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 3 cut(s) 65, 107, 134
MaeI CTAG 1 cut(s) 95
MalI GATC 1 cut(s) 30
MboI GATC 1 cut(s) 28
MluCI AATT 1 cut(s) 71
MnlI CCTC 3 cut(s) 10, 103, 106
MseI TTAA 3 cut(s) 39, 165, 193
MspR9I CCNGG 1 cut(s) 122
MvaI CCWGG 1 cut(s) 122
MwoI GCNNNNNNNGC 1 cut(s) 91
NdeII GATC 1 cut(s) 28
NlaIII CATG 1 cut(s) 139
NspI RCATGY 1 cut(s) 139
PaeI GCATGC 1 cut(s) 139
Psp6I CCWGG 1 cut(s) 120
PspGI CCWGG 1 cut(s) 120
SaqAI TTAA 3 cut(s) 39, 165, 193
Sau3AI GATC 1 cut(s) 28
ScrFI CCNGG 1 cut(s) 122
SetI ASST 2 cut(s) 37, 117
SgeI CNNG 8 cut(s) 24, 44, 92, 103, 107, 133, 134, 148
SphI GCATGC 1 cut(s) 139
Sse9I AATT 1 cut(s) 71
SsiI CCGC 1 cut(s) 50
SspMI CTAG 1 cut(s) 95
StyD4I CCNGG 1 cut(s) 120
TaqI TCGA 1 cut(s) 27
TasI AATT 1 cut(s) 71
Tru1I TTAA 3 cut(s) 39, 165, 193
Tru9I TTAA 3 cut(s) 39, 165, 193
TspDTI ATGAA 1 cut(s) 83
XapI RAATTY 1 cut(s) 71
XceI RCATGY 1 cut(s) 139
XcmI CCANNNNNNNNNTGG 1 cut(s) 128
XspI CTAG 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.