Rmu_sc0009394.1_g000002
ERF Family

Eukaryotic peptide chain release factor subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009394.1
Physical Location & Seq
Reverse (-)
4703 .. 12088
7386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009394.1_g000002.1.cds

Sequence Viewer

Length: 1245 bp
atgagttctagtgaggaagaggaggaggaggcgctcgagcttgggaggaggaggagctcgggtctgggttcagaatggaggtcgagagtggagactgagtatgtttatgaagtcatcaacaggagttcatgttccggcactttatctaggctttttgagtctccggccgacctccggctaacttccggcgagtctccgaccgacctcctagagatcatcagtgacaatggcatttatgctagcccctctcgatgtgaggtctctggtaaactccggcaggtctccggccgacctccggctaacttccggcgagtctccgaccgacctcctactatcacaaaagctactgtcactaacaccaaaagctactgtgatgagatttccggcaacctccggcgagaggccgaacaacgacccgagctcaagagtcttgaacaagcagctcttctgctcagaggtctcgccggagctctcggcagtagcggctacctccaaactgctctgatcgacagcaggagaagtccagggcctgagcttgaaataggaggaggagagggacctggatcggctggaaagagcggcggagaggtcgtcattggtgaggaggtgaaagcagtgtcaggcttgagcgaggcggagacatgtgtatgggtgttgcccggagcatcctccaccgtcgatgacgacgatgaagaagtcgaagccccagtcaccgccattacggccgggttctccatctcctacaacaaatctaacccattcgcgttgtcgaatatgaaatctcaatcgatctctccgatcacgtcaacgccactgtccaagagttcggatcgaagtggtggagctagtgatgaggaaaagataaatatgtcaacacatatgctggaagattcttatggtactaattatgaatcagatggtaatcatgttatagatacagctattgagactaaaaaagaaaatgccactaagctttttaataaccctgccaccaaccaacccaatgtagcaggattaatactggcaggatcagtggacttcaaaactgttcttagtgggtcagacaagtttgatcaatgtctgcatgccaaaatactgaatgtggtgagaattcgctgtgaaggagagaatggtttcgatcagactattgacttgtcattgaaaattctatccaatgtgaaatttgtgcaaaagatatgcttgatggaagaaaaataccttgaagagattagattggatacatga

Protein Analysis

414

Amino Acids

44.68

Weight (kDa)

4.78

Isoelectric Point (pI)

56.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 268
AccBSI CCGCTC 1 cut(s) 579
AccII CGCG 1 cut(s) 764
AciI CCGC 5 cut(s) 483, 579, 582, 635, 714
AclWI GGATC 3 cut(s) 571, 837, 1036
AcoI YGGCCR 3 cut(s) 165, 286, 723
AcsI RAATTY 3 cut(s) 1110, 1164, 1181
AfaI GTAC 1 cut(s) 901
AfiI CCNNNNNNNGG 3 cut(s) 174, 295, 400
AflIII ACRYGT 1 cut(s) 641
AgsI TTSAA 5 cut(s) 434, 539, 1042, 1162, 1223
AjiI CACGTC 1 cut(s) 804
AjnI CCWGG 2 cut(s) 523, 559
AloI GAACNNNNNNTCC 2 cut(s) 115, 147
Alw21I GWGCWC 3 cut(s) 59, 423, 472
Alw26I GTCTC 9 cut(s) 86, 165, 198, 265, 286, 319, 464, 632, 941
AlwI GGATC 3 cut(s) 571, 837, 1036
AlwNI CAGNNNCTG 1 cut(s) 530
Ama87I CYCGRG 3 cut(s) 35, 58, 416
AoxI GGCC 5 cut(s) 165, 286, 402, 527, 723
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 3 cut(s) 1110, 1164, 1181
ArsI GACNNNNNNTTYG 2 cut(s) 693, 725
AseI ATTAAT 1 cut(s) 1016
Asp700I GAANNNNTTC 1 cut(s) 1133
AspLEI GCGC 1 cut(s) 34
AspS9I GGNCC 2 cut(s) 527, 557
AsuC2I CCSGG 2 cut(s) 660, 727
AsuHPI GGTGA 4 cut(s) 611, 619, 703, 1117
AsuNHI GCTAGC 1 cut(s) 239
AvaI CYCGRG 3 cut(s) 35, 58, 416
AvaII GGWCC 1 cut(s) 557
BanII GRGCYC 3 cut(s) 59, 423, 472
Bbv12I GWGCWC 3 cut(s) 59, 423, 472
BbvI GCAGC 1 cut(s) 452
BccI CCATC 3 cut(s) 743, 911, 1198
BceAI ACGGC 1 cut(s) 738
BciT130I CCWGG 2 cut(s) 525, 561
BciVI GTATCC 1 cut(s) 1231
BclI TGATCA 1 cut(s) 1072
BcnI CCSGG 2 cut(s) 660, 727
BcoDI GTCTC 9 cut(s) 86, 165, 198, 265, 286, 319, 464, 632, 941
BfaI CTAG 5 cut(s) 9, 147, 209, 240, 846
BfoI RGCGCY 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 268
BfuI GTATCC 1 cut(s) 1231
BglI GCCNNNNNGGC 1 cut(s) 722
BisI GCNGC 3 cut(s) 441, 484, 580
BlsI GCNGC 3 cut(s) 442, 485, 581
Bme1390I CCNGG 4 cut(s) 525, 561, 660, 727
Bme18I GGWCC 1 cut(s) 557
BmeT110I CYCGRG 3 cut(s) 35, 58, 416
BmgBI CACGTC 1 cut(s) 804
BmgT120I GGNCC 2 cut(s) 527, 557
BmiI GGNNCC 1 cut(s) 558
BmrFI CCNGG 4 cut(s) 525, 561, 660, 727
BmrI ACTGGG 1 cut(s) 701
BmsI GCATC 1 cut(s) 674
BmtI GCTAGC 1 cut(s) 243
BmuI ACTGGG 1 cut(s) 701
Bpu10I CCTNAGC 1 cut(s) 531
BpuEI CTTGAG 2 cut(s) 407, 646
BpuMI CCSGG 2 cut(s) 660, 727
Bsa29I ATCGAT 1 cut(s) 788
BsaBI GATNNNNATC 1 cut(s) 921
BsaI GGTCTC 3 cut(s) 265, 286, 464
BsaJI CCNNGG 1 cut(s) 524
BsaXI ACNNNNNCTCC 8 cut(s) 46, 76, 83, 113, 115, 145, 576, 606
Bsc4I CCNNNNNNNGG 3 cut(s) 174, 295, 400
Bse1I ACTGG 2 cut(s) 707, 1026
Bse8I GATNNNNATC 1 cut(s) 921
BseBI CCWGG 2 cut(s) 525, 561
BseCI ATCGAT 1 cut(s) 788
BseDI CCNNGG 1 cut(s) 524
BseGI GGATG 1 cut(s) 665
BseJI GATNNNNATC 1 cut(s) 921
BseLI CCNNNNNNNGG 3 cut(s) 174, 295, 400
BseMII CTCAG 3 cut(s) 87, 466, 522
BseNI ACTGG 2 cut(s) 707, 1026
BseRI GAGGAG 9 cut(s) 35, 38, 41, 61, 64, 67, 561, 564, 617
BseX3I CGGCCG 3 cut(s) 165, 286, 723
BseXI GCAGC 1 cut(s) 452
Bsh1236I CGCG 1 cut(s) 764
Bsh1285I CGRYCG 5 cut(s) 168, 201, 289, 322, 726
BshFI GGCC 5 cut(s) 167, 288, 404, 529, 725
BshVI ATCGAT 1 cut(s) 788
BsiEI CGRYCG 5 cut(s) 168, 201, 289, 322, 726
BsiHKAI GWGCWC 3 cut(s) 59, 423, 472
BsiHKCI CYCGRG 3 cut(s) 35, 58, 416
BslFI GGGAC 1 cut(s) 570
BslI CCNNNNNNNGG 3 cut(s) 174, 295, 400
BsmAI GTCTC 9 cut(s) 86, 165, 198, 265, 286, 319, 464, 632, 941
BsmFI GGGAC 1 cut(s) 570
BsnI GGCC 5 cut(s) 167, 288, 404, 529, 725
Bso31I GGTCTC 3 cut(s) 265, 286, 464
BsoBI CYCGRG 3 cut(s) 35, 58, 416
Bsp1286I GDGCHC 3 cut(s) 59, 423, 472
Bsp143I GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
BspACI CCGC 5 cut(s) 483, 579, 582, 635, 714
BspANI GGCC 5 cut(s) 167, 288, 404, 529, 725
BspCNI CTCAG 3 cut(s) 88, 465, 523
BspDI ATCGAT 1 cut(s) 788
BspFNI CGCG 1 cut(s) 764
BspLI GGNNCC 1 cut(s) 558
BspMI ACCTGC 1 cut(s) 268
BspOI GCTAGC 1 cut(s) 243
BspPI GGATC 3 cut(s) 571, 837, 1036
BspQI GCTCTTC 1 cut(s) 450
BspTNI GGTCTC 3 cut(s) 265, 286, 464
BsrBI CCGCTC 1 cut(s) 579
BsrI ACTGG 2 cut(s) 707, 1026
BssECI CCNNGG 1 cut(s) 524
BssMI GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
Bst2UI CCWGG 2 cut(s) 525, 561
Bst4CI ACNGT 5 cut(s) 349, 371, 676, 816, 1048
Bst6I CTCTTC 3 cut(s) 12, 450, 1218
BstC8I GCNNGC 2 cut(s) 241, 1086
BstDEI CTNAG 5 cut(s) 96, 452, 531, 969, 1052
BstF5I GGATG 1 cut(s) 665
BstFNI CGCG 1 cut(s) 764
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 1 cut(s) 34
BstKTI GATC 9 cut(s) 216, 507, 566, 792, 801, 832, 1031, 1075, 1141
BstMAI GTCTC 9 cut(s) 86, 165, 198, 265, 286, 319, 464, 632, 941
BstMBI GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
BstMCI CGRYCG 5 cut(s) 168, 201, 289, 322, 726
BstMWI GCNNNNNNNGC 2 cut(s) 483, 722
BstNI CCWGG 2 cut(s) 525, 561
BstNSI RCATGY 2 cut(s) 645, 1088
BstSCI CCNGG 4 cut(s) 523, 559, 658, 725
BstUI CGCG 1 cut(s) 764
BstV1I GCAGC 1 cut(s) 452
BstZI CGGCCG 3 cut(s) 165, 286, 723
Bsu15I ATCGAT 1 cut(s) 788
BsuI GTATCC 1 cut(s) 1231
BsuRI GGCC 5 cut(s) 167, 288, 404, 529, 725
BsuTUI ATCGAT 1 cut(s) 788
BtrI CACGTC 1 cut(s) 804
BtsCI GGATG 1 cut(s) 665
BtsI GCAGTG 1 cut(s) 621
BtsIMutI CAGTG 4 cut(s) 226, 621, 812, 1038
BveI ACCTGC 1 cut(s) 268
Cac8I GCNNGC 2 cut(s) 241, 1086
CaiI CAGNNNCTG 1 cut(s) 530
CfoI GCGC 1 cut(s) 34
Cfr13I GGNCC 2 cut(s) 527, 557
ClaI ATCGAT 1 cut(s) 788
Csp6I GTAC 1 cut(s) 900
CviAII CATG 5 cut(s) 129, 642, 926, 1085, 1242
CviQI GTAC 1 cut(s) 900
DdeI CTNAG 5 cut(s) 96, 452, 531, 969, 1052
DpnI GATC 9 cut(s) 215, 506, 565, 791, 800, 831, 1030, 1074, 1140
DpnII GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
EaeI YGGCCR 3 cut(s) 165, 286, 723
EagI CGGCCG 3 cut(s) 165, 286, 723
Eam1104I CTCTTC 3 cut(s) 12, 450, 1218
EarI CTCTTC 3 cut(s) 12, 450, 1218
EciI GGCGGA 2 cut(s) 597, 650
Ecl136II GAGCTC 3 cut(s) 57, 421, 470
EclXI CGGCCG 3 cut(s) 165, 286, 723
Eco24I GRGCYC 3 cut(s) 59, 423, 472
Eco31I GGTCTC 3 cut(s) 265, 286, 464
Eco47I GGWCC 1 cut(s) 557
Eco52I CGGCCG 3 cut(s) 165, 286, 723
Eco53kI GAGCTC 3 cut(s) 57, 421, 470
Eco88I CYCGRG 3 cut(s) 35, 58, 416
EcoICRI GAGCTC 3 cut(s) 57, 421, 470
EcoO109I RGGNCCY 2 cut(s) 527, 557
EcoRI GAATTC 1 cut(s) 1110
EcoRII CCWGG 2 cut(s) 523, 559
EcoT38I GRGCYC 3 cut(s) 59, 423, 472
FaeI CATG 5 cut(s) 132, 645, 929, 1088, 1245
FalI AAGNNNNNCTT 4 cut(s) 429, 461, 1184, 1216
FaqI GGGAC 1 cut(s) 570
FatI CATG 5 cut(s) 128, 641, 925, 1084, 1241
FauNDI CATATG 1 cut(s) 879
FbaI TGATCA 1 cut(s) 1072
Fnu4HI GCNGC 3 cut(s) 441, 484, 580
FokI GGATG 1 cut(s) 652
FriOI GRGCYC 3 cut(s) 59, 423, 472
Fsp4HI GCNGC 3 cut(s) 441, 484, 580
FspBI CTAG 5 cut(s) 9, 147, 209, 240, 846
GlaI GCGC 1 cut(s) 33
GluI GCNGC 3 cut(s) 441, 484, 580
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 5 cut(s) 167, 288, 404, 529, 725
HhaI GCGC 1 cut(s) 34
Hin1II CATG 5 cut(s) 132, 645, 929, 1088, 1245
Hin6I GCGC 1 cut(s) 32
HinP1I GCGC 1 cut(s) 32
HincII GTYRAC 2 cut(s) 807, 873
HindII GTYRAC 2 cut(s) 807, 873
HindIII AAGCTT 1 cut(s) 971
HinfI GANTC 6 cut(s) 158, 191, 312, 427, 890, 911
HphI GGTGA 4 cut(s) 611, 619, 703, 1117
Hpy166II GTNNAC 4 cut(s) 269, 807, 873, 1036
Hpy188III TCNNGA 4 cut(s) 84, 249, 424, 431
Hpy8I GTNNAC 4 cut(s) 269, 807, 873, 1036
Hpy99I CGWCG 2 cut(s) 680, 689
HpyAV CCTTC 1 cut(s) 1115
HpyCH4III ACNGT 5 cut(s) 349, 371, 676, 816, 1048
HpyCH4IV ACGT 1 cut(s) 803
HpyCH4V TGCA 2 cut(s) 1084, 1189
HpyF10VI GCNNNNNNNGC 2 cut(s) 483, 722
HpyF3I CTNAG 5 cut(s) 96, 452, 531, 969, 1052
HpySE526I ACGT 1 cut(s) 803
Hsp92II CATG 5 cut(s) 132, 645, 929, 1088, 1245
HspAI GCGC 1 cut(s) 32
Ksp22I TGATCA 1 cut(s) 1072
Kzo9I GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
LguI GCTCTTC 1 cut(s) 450
LmnI GCTCC 4 cut(s) 54, 467, 662, 842
Lsp1109I GCAGC 1 cut(s) 452
LweI GCATC 1 cut(s) 674
MaeI CTAG 5 cut(s) 9, 147, 209, 240, 846
MaeII ACGT 1 cut(s) 803
MaeIII GTNAC 3 cut(s) 221, 349, 709
MalI GATC 9 cut(s) 215, 506, 565, 791, 800, 831, 1030, 1074, 1140
MbiI CCGCTC 1 cut(s) 579
MboI GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
MboII GAAGA 6 cut(s) 29, 437, 704, 899, 1220, 1235
MhlI GDGCHC 3 cut(s) 59, 423, 472
MluCI AATT 4 cut(s) 904, 1110, 1164, 1181
MlyI GAGTC 4 cut(s) 167, 200, 321, 436
MmeI TCCRAC 2 cut(s) 221, 342
MroXI GAANNNNTTC 1 cut(s) 1133
MseI TTAA 2 cut(s) 978, 1016
MslI CAYNNNNRTG 1 cut(s) 646
MspR9I CCNGG 4 cut(s) 525, 561, 660, 727
MvaI CCWGG 2 cut(s) 525, 561
MvnI CGCG 1 cut(s) 764
MwoI GCNNNNNNNGC 2 cut(s) 483, 722
NciI CCSGG 2 cut(s) 660, 727
NdeI CATATG 1 cut(s) 879
NdeII GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
NheI GCTAGC 1 cut(s) 239
NlaIII CATG 5 cut(s) 132, 645, 929, 1088, 1245
NlaIV GGNNCC 1 cut(s) 558
NmeAIII GCCGAG 1 cut(s) 453
NmuCI GTSAC 3 cut(s) 221, 349, 709
NspI RCATGY 2 cut(s) 645, 1088
PaeI GCATGC 1 cut(s) 1088
PaeR7I CTCGAG 1 cut(s) 35
PciI ACATGT 1 cut(s) 641
PciSI GCTCTTC 1 cut(s) 450
PcsI WCGNNNNNNNCGW 2 cut(s) 684, 794
PdmI GAANNNNTTC 1 cut(s) 1133
PfeI GAWTC 2 cut(s) 890, 911
PkrI GCNGC 3 cut(s) 442, 485, 581
PleI GAGTC 4 cut(s) 166, 199, 320, 435
PpsI GAGTC 4 cut(s) 166, 199, 320, 435
PpuMI RGGWCCY 1 cut(s) 557
PscI ACATGT 1 cut(s) 641
PshBI ATTAAT 1 cut(s) 1016
Psp124BI GAGCTC 3 cut(s) 59, 423, 472
Psp5II RGGWCCY 1 cut(s) 557
Psp6I CCWGG 2 cut(s) 523, 559
PspGI CCWGG 2 cut(s) 523, 559
PspN4I GGNNCC 1 cut(s) 558
PspPI GGNCC 2 cut(s) 527, 557
PspPPI RGGWCCY 1 cut(s) 557
PspXI VCTCGAGB 1 cut(s) 35
PstNI CAGNNNCTG 1 cut(s) 530
RsaI GTAC 1 cut(s) 901
RsaNI GTAC 1 cut(s) 900
RseI CAYNNNNRTG 1 cut(s) 646
SacI GAGCTC 3 cut(s) 59, 423, 472
SapI GCTCTTC 1 cut(s) 450
SaqAI TTAA 2 cut(s) 978, 1016
SatI GCNGC 3 cut(s) 441, 484, 580
Sau3AI GATC 9 cut(s) 213, 504, 563, 789, 798, 829, 1028, 1072, 1138
Sau96I GGNCC 2 cut(s) 527, 557
SchI GAGTC 4 cut(s) 167, 200, 321, 436
ScrFI CCNGG 4 cut(s) 525, 561, 660, 727
SduI GDGCHC 3 cut(s) 59, 423, 472
SfaNI GCATC 1 cut(s) 674
Sfr274I CTCGAG 1 cut(s) 35
SinI GGWCC 1 cut(s) 557
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 646
SmlI CTYRAG 3 cut(s) 35, 422, 625
SmoI CTYRAG 3 cut(s) 35, 422, 625
SphI GCATGC 1 cut(s) 1088
Sse9I AATT 4 cut(s) 904, 1110, 1164, 1181
SsiI CCGC 5 cut(s) 483, 579, 582, 635, 714
SspMI CTAG 5 cut(s) 9, 147, 209, 240, 846
SstI GAGCTC 3 cut(s) 59, 423, 472
StyD4I CCNGG 4 cut(s) 523, 559, 658, 725
TaaI ACNGT 5 cut(s) 349, 371, 676, 816, 1048
TaiI ACGT 1 cut(s) 806
TaqII GACCGA 2 cut(s) 215, 336
TasI AATT 4 cut(s) 904, 1110, 1164, 1181
TauI GCSGC 2 cut(s) 486, 582
TfiI GAWTC 2 cut(s) 890, 911
Tru1I TTAA 2 cut(s) 978, 1016
Tru9I TTAA 2 cut(s) 978, 1016
TscAI CASTG 4 cut(s) 226, 621, 819, 1038
TseFI GTSAC 3 cut(s) 221, 349, 709
TseI GCWGC 1 cut(s) 440
Tsp45I GTSAC 3 cut(s) 221, 349, 709
TspDTI ATGAA 5 cut(s) 117, 123, 705, 791, 924
TspRI CASTG 4 cut(s) 226, 621, 819, 1038
VpaK11BI GGWCC 1 cut(s) 557
VspI ATTAAT 1 cut(s) 1016
XapI RAATTY 3 cut(s) 1110, 1164, 1181
XceI RCATGY 2 cut(s) 645, 1088
XhoI CTCGAG 1 cut(s) 35
XmnI GAANNNNTTC 1 cut(s) 1133
XspI CTAG 5 cut(s) 9, 147, 209, 240, 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.