MD06G1183400.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
32178043 .. 32180916
2874 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1183400.v1.1.491

Sequence Viewer

Length: 1410 bp
ATGGTGACGTCATCTCAGAAGAAAACGCTCCACTCCCTGCTGGCCGCGAAGCTCAGCAGCCTCACAATCCCGCCGTCCTCCGCCCCATCCTCCTCATCCCCACCTCAAGACTTCGACTTTAACGAAATCTTCGGCCCCACAGCCACCACCCCCAACGACTCATCAACCTCCGCCGCCGCCTCATTCCCGCCTCCGCCGCTAGTCATCCACAACCGCTCTCACTCCTTCGTGGGCCCCTCCCCGCGCTTCACTCCCACTCCCTACTCCCTTCCCTTCACCTCCGACTTCCTCGATTCCCAGAGCGATGACGCCGAAGCGGAAACCCCAGTCGGAACCGAGAATCGGAATGGTGGGGAATCAGAGAAGACCGAGCTCGGAGCTCGGAAGTTTGGGCCTGCGGATTTTGAGATGCTGAGAGTTGTGGGTCAGGGCGCGTTTGGGAAGGTCTTTCAAGTGAGAAAGAAGAGCGACGACGACAGTAACGGCGGCGGTGACGGCGGTGATGGGCTTTTTGCCATGAAGGTTATGAGGAAGGACACAATCATAAAGAAGAACCATGTTGATTACATGAAAGCTGAGAGAGATATTCTCACTAAGGTTGTGCACCCCTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAACTCTAAGCTTTATTTGATCATGGATTTTATAAACGGAGGGCATCTCTTCTTTCATCTATACCGGCAGGGAATCTTCAGCGAGGATCAGGCGAGATTTTATACTGCTGAGATAGTGTCTGCTGTTGCACATCTTCACAAGTGCGGGATTGTCCATCGGGACCTTAAACCTGAAAATGTTCTTGTGGATTCTGATGGGCATGTCATGCTAACTGATTTTGGGCTAGCAAAGGAAATTGACGAAGCCAGCAGATCGAATTCAATGTGTGGCACCACAGAGTACATGGCTCCAGAAATTTTGCTGTCTAAAGGCCACAACAAAGATGCGGATTGGTGGAGCATCGGTATCCTTTTGTATGAGATGCTAAAGGGGCAGCCACCATTTACACACGCCAACAGAAAGAAACTTCAGGAGAGAATCATCAAGGAGAAAGTTAAACTCCCGTCGTATCTGACCAGCGAAGCTCACTCTCTGCTGAAAGGATTGCTACAAAAGGATCCGTCACAGAGGTTAGGTAACGGGCCGAATGGAGGGGATAACGTCAAAAGCCATAAATGGTTTCGATCAATCAACTGGAAGAAGTTGGAGGCCAGAGAAGTGCTCCCAAAGTTCAAACCAGATGTGAGCGGAAAAGACTGCACAGCCAACTTTGACCGGTGCTGGACTACAATGCCTCTGGAAGACTCACCCGCTCCTACACCAACTGCGGGTGAGCATTTCCAGGGGTACACTTACGTGGCACCTAACCCGTGGCTTTCGTCGATATAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

470

Amino Acids

52.0

Weight (kDa)

6.98

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 135 - 401 2.3e-73 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 136 - 384 1.1e-38 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 216 - 300 1.3e-06 ABC1 atypical kinase-like domain
Kinase-like PF14531 244 - 384 1.1e-09 Kinase-like
Pkinase_fungal PF17667 253 - 324 3.9e-08 Fungal protein kinase
Pkinase_C PF00433 422 - 459 3.4e-06 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 674
AatII GACGTC 1 cut(s) 11
AccB1I GGYRCC 2 cut(s) 911, 1381
AccBSI CCGCTC 3 cut(s) 216, 1269, 1334
AccII CGCG 3 cut(s) 47, 244, 434
AclWI GGATC 3 cut(s) 735, 1133, 1146
AcoI YGGCCR 1 cut(s) 42
AcsI RAATTY 2 cut(s) 898, 936
AcuI CTGAAG 2 cut(s) 703, 1034
AcyI GRCGYC 2 cut(s) 8, 309
AfaI GTAC 2 cut(s) 923, 1370
AfiI CCNNNNNNNGG 3 cut(s) 342, 1172, 1349
AgeI ACCGGT 1 cut(s) 1296
AgsI TTSAA 3 cut(s) 452, 903, 1255
AjnI CCWGG 1 cut(s) 1362
AleI CACNNNNGTG 1 cut(s) 1376
AluBI AGCT 7 cut(s) 52, 373, 380, 575, 622, 652, 1106
AluI AGCT 7 cut(s) 52, 373, 380, 575, 622, 652, 1106
Alw21I GWGCWC 4 cut(s) 375, 382, 606, 1245
Alw44I GTGCAC 1 cut(s) 602
AlwI GGATC 3 cut(s) 735, 1133, 1146
AoxI GGCC 7 cut(s) 42, 133, 232, 392, 952, 1163, 1230
ApaI GGGCCC 1 cut(s) 236
ApaLI GTGCAC 1 cut(s) 602
ApeKI GCWGC 2 cut(s) 57, 1015
ApoI RAATTY 2 cut(s) 898, 936
AsiGI ACCGGT 1 cut(s) 1296
Asp700I GAANNNNTTC 1 cut(s) 819
AspLEI GCGC 2 cut(s) 246, 434
AspS9I GGNCC 6 cut(s) 134, 232, 233, 392, 802, 1163
AsuHPI GGTGA 6 cut(s) 16, 268, 503, 512, 1320, 1364
AsuNHI GCTAGC 1 cut(s) 865
AvaII GGWCC 1 cut(s) 802
BaeGI GKGCMC 2 cut(s) 236, 606
BamHI GGATCC 1 cut(s) 1138
BanI GGYRCC 2 cut(s) 911, 1381
BanII GRGCYC 3 cut(s) 236, 375, 382
BbsI GAAGAC 2 cut(s) 371, 1329
Bbv12I GWGCWC 4 cut(s) 375, 382, 606, 1245
BbvI GCAGC 2 cut(s) 69, 1027
BccI CCATC 4 cut(s) 94, 497, 804, 830
BceAI ACGGC 3 cut(s) 58, 499, 511
BciT130I CCWGG 1 cut(s) 1364
BciVI GTATCC 1 cut(s) 998
BclI TGATCA 1 cut(s) 660
BfaI CTAG 2 cut(s) 200, 866
BfuI GTATCC 1 cut(s) 998
BisI GCNGC 7 cut(s) 45, 58, 174, 177, 197, 487, 1016
BlpI GCTNAGC 1 cut(s) 53
BlsI GCNGC 7 cut(s) 46, 59, 175, 178, 198, 488, 1017
Bme1390I CCNGG 1 cut(s) 1364
Bme18I GGWCC 1 cut(s) 802
BmgT120I GGNCC 6 cut(s) 134, 232, 233, 392, 802, 1163
BmiI GGNNCC 9 cut(s) 136, 234, 235, 334, 803, 913, 930, 1140, 1383
BmrFI CCNGG 1 cut(s) 1364
BmrI ACTGGG 1 cut(s) 320
BmsI GCATC 5 cut(s) 399, 694, 955, 990, 993
BmtI GCTAGC 1 cut(s) 869
BmuI ACTGGG 1 cut(s) 320
BpiI GAAGAC 2 cut(s) 371, 1329
BplI GAGNNNNNCTC 6 cut(s) 573, 605, 672, 704, 1227, 1259
BpmI CTGGAG 1 cut(s) 915
Bpu1102I GCTNAGC 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 90
BsaAI YACGTR 1 cut(s) 1378
BsaHI GRCGYC 2 cut(s) 8, 309
BsaJI CCNNGG 2 cut(s) 1363, 1391
BsaWI WCCGGW 1 cut(s) 1296
BsaXI ACNNNNNCTCC 4 cut(s) 241, 271, 970, 1000
Bsc4I CCNNNNNNNGG 3 cut(s) 342, 1172, 1349
Bse118I RCCGGY 2 cut(s) 705, 1296
Bse1I ACTGG 2 cut(s) 326, 1220
BseBI CCWGG 1 cut(s) 1364
BseDI CCNNGG 2 cut(s) 1363, 1391
BseGI GGATG 3 cut(s) 86, 95, 204
BseLI CCNNNNNNNGG 3 cut(s) 342, 1172, 1349
BseMII CTCAG 5 cut(s) 29, 67, 404, 567, 741
BseNI ACTGG 2 cut(s) 326, 1220
BseRI GAGGAG 1 cut(s) 82
BseSI GKGCMC 2 cut(s) 236, 606
BseXI GCAGC 2 cut(s) 69, 1027
BsgI GTGCAG 1 cut(s) 1264
Bsh1236I CGCG 3 cut(s) 47, 244, 434
BshFI GGCC 7 cut(s) 44, 135, 234, 394, 954, 1165, 1232
BshNI GGYRCC 2 cut(s) 911, 1381
BshTI ACCGGT 1 cut(s) 1296
BsiHKAI GWGCWC 4 cut(s) 375, 382, 606, 1245
BsiSI CCGG 2 cut(s) 706, 1297
BslFI GGGAC 1 cut(s) 815
BslI CCNNNNNNNGG 3 cut(s) 342, 1172, 1349
BsmFI GGGAC 1 cut(s) 815
BsnI GGCC 7 cut(s) 44, 135, 234, 394, 954, 1165, 1232
Bsp120I GGGCCC 1 cut(s) 232
Bsp1286I GDGCHC 5 cut(s) 236, 375, 382, 606, 1245
Bsp143I GATC 5 cut(s) 660, 727, 893, 1138, 1205
Bsp1720I GCTNAGC 1 cut(s) 53
BspANI GGCC 7 cut(s) 44, 135, 234, 394, 954, 1165, 1232
BspCNI CTCAG 5 cut(s) 28, 66, 405, 568, 742
BspFNI CGCG 3 cut(s) 47, 244, 434
BspLI GGNNCC 9 cut(s) 136, 234, 235, 334, 803, 913, 930, 1140, 1383
BspOI GCTAGC 1 cut(s) 869
BspPI GGATC 3 cut(s) 735, 1133, 1146
BspQI GCTCTTC 1 cut(s) 458
BspT107I GGYRCC 2 cut(s) 911, 1381
BsrBI CCGCTC 3 cut(s) 216, 1269, 1334
BsrFI RCCGGY 2 cut(s) 705, 1296
BsrI ACTGG 2 cut(s) 326, 1220
BssAI RCCGGY 2 cut(s) 705, 1296
BssECI CCNNGG 2 cut(s) 1363, 1391
BssMI GATC 5 cut(s) 660, 727, 893, 1138, 1205
BssNI GRCGYC 2 cut(s) 8, 309
Bst2UI CCWGG 1 cut(s) 1364
Bst4CI ACNGT 1 cut(s) 479
Bst6I CTCTTC 2 cut(s) 458, 695
BstACI GRCGYC 2 cut(s) 8, 309
BstAPI GCANNNNNTGC 1 cut(s) 847
BstBAI YACGTR 1 cut(s) 1378
BstC8I GCNNGC 4 cut(s) 42, 396, 867, 889
BstDEI CTNAG 7 cut(s) 15, 53, 413, 576, 594, 648, 750
BstDSI CCRYGG 1 cut(s) 1391
BstF5I GGATG 3 cut(s) 86, 95, 204
BstFNI CGCG 3 cut(s) 47, 244, 434
BstHHI GCGC 2 cut(s) 246, 434
BstKTI GATC 5 cut(s) 663, 730, 896, 1141, 1208
BstMBI GATC 5 cut(s) 660, 727, 893, 1138, 1205
BstMWI GCNNNNNNNGC 4 cut(s) 196, 495, 847, 1012
BstNI CCWGG 1 cut(s) 1364
BstNSI RCATGY 1 cut(s) 845
BstSCI CCNGG 1 cut(s) 1362
BstSLI GKGCMC 2 cut(s) 236, 606
BstUI CGCG 3 cut(s) 47, 244, 434
BstV1I GCAGC 2 cut(s) 69, 1027
BstV2I GAAGAC 2 cut(s) 371, 1329
BstX2I RGATCY 1 cut(s) 1138
BstYI RGATCY 1 cut(s) 1138
BsuI GTATCC 1 cut(s) 998
BsuRI GGCC 7 cut(s) 44, 135, 234, 394, 954, 1165, 1232
BtgI CCRYGG 1 cut(s) 1391
BtgZI GCGATG 1 cut(s) 318
BtsCI GGATG 3 cut(s) 86, 95, 204
Cac8I GCNNGC 4 cut(s) 42, 396, 867, 889
CfoI GCGC 2 cut(s) 246, 434
Cfr10I RCCGGY 2 cut(s) 705, 1296
Cfr13I GGNCC 6 cut(s) 134, 232, 233, 392, 802, 1163
CseI GACGC 1 cut(s) 317
Csp6I GTAC 2 cut(s) 922, 1369
CspAI ACCGGT 1 cut(s) 1296
CviAII CATG 7 cut(s) 517, 557, 568, 664, 842, 847, 925
CviQI GTAC 2 cut(s) 922, 1369
DdeI CTNAG 7 cut(s) 15, 53, 413, 576, 594, 648, 750
DpnI GATC 5 cut(s) 662, 729, 895, 1140, 1207
DpnII GATC 5 cut(s) 660, 727, 893, 1138, 1205
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 458, 695
EarI CTCTTC 2 cut(s) 458, 695
EciI GGCGGA 3 cut(s) 70, 160, 183
Ecl136II GAGCTC 2 cut(s) 373, 380
Eco24I GRGCYC 3 cut(s) 236, 375, 382
Eco47I GGWCC 1 cut(s) 802
Eco53kI GAGCTC 2 cut(s) 373, 380
Eco57I CTGAAG 2 cut(s) 703, 1034
EcoICRI GAGCTC 2 cut(s) 373, 380
EcoO109I RGGNCCY 2 cut(s) 233, 802
EcoRI GAATTC 1 cut(s) 898
EcoRII CCWGG 1 cut(s) 1362
EcoT38I GRGCYC 3 cut(s) 236, 375, 382
FaeI CATG 7 cut(s) 520, 560, 571, 667, 845, 850, 928
FaqI GGGAC 1 cut(s) 815
FatI CATG 7 cut(s) 516, 556, 567, 663, 841, 846, 924
FauI CCCGC 6 cut(s) 78, 195, 249, 779, 1339, 1342
FbaI TGATCA 1 cut(s) 660
Fnu4HI GCNGC 7 cut(s) 45, 58, 174, 177, 197, 487, 1016
FokI GGATG 3 cut(s) 73, 82, 191
FriOI GRGCYC 3 cut(s) 236, 375, 382
Fsp4HI GCNGC 7 cut(s) 45, 58, 174, 177, 197, 487, 1016
FspBI CTAG 2 cut(s) 200, 866
GlaI GCGC 2 cut(s) 245, 433
GluI GCNGC 7 cut(s) 45, 58, 174, 177, 197, 487, 1016
GsuI CTGGAG 1 cut(s) 915
HaeIII GGCC 7 cut(s) 44, 135, 234, 394, 954, 1165, 1232
HapII CCGG 2 cut(s) 706, 1297
HgaI GACGC 1 cut(s) 317
HhaI GCGC 2 cut(s) 246, 434
Hin1I GRCGYC 2 cut(s) 8, 309
Hin1II CATG 7 cut(s) 520, 560, 571, 667, 845, 850, 928
Hin6I GCGC 2 cut(s) 244, 432
HinP1I GCGC 2 cut(s) 244, 432
HindIII AAGCTT 1 cut(s) 650
HinfI GANTC 8 cut(s) 158, 293, 340, 356, 714, 830, 1059, 1325
HpaII CCGG 2 cut(s) 706, 1297
HphI GGTGA 6 cut(s) 16, 268, 503, 512, 1320, 1364
Hpy166II GTNNAC 2 cut(s) 604, 1371
Hpy188I TCNGA 9 cut(s) 18, 283, 332, 345, 361, 377, 384, 835, 1095
Hpy188III TCNNGA 6 cut(s) 107, 637, 800, 932, 1052, 1319
Hpy8I GTNNAC 2 cut(s) 604, 1371
Hpy99I CGWCG 4 cut(s) 473, 476, 1090, 1405
HpyAV CCTTC 7 cut(s) 235, 278, 283, 436, 514, 526, 619
HpyCH4III ACNGT 1 cut(s) 479
HpyCH4IV ACGT 3 cut(s) 8, 1182, 1377
HpyCH4V TGCA 3 cut(s) 604, 770, 1281
HpyF10VI GCNNNNNNNGC 4 cut(s) 196, 495, 847, 1012
HpyF3I CTNAG 7 cut(s) 15, 53, 413, 576, 594, 648, 750
HpySE526I ACGT 3 cut(s) 8, 1182, 1377
Hsp92I GRCGYC 2 cut(s) 8, 309
Hsp92II CATG 7 cut(s) 520, 560, 571, 667, 845, 850, 928
HspAI GCGC 2 cut(s) 244, 432
Ksp22I TGATCA 1 cut(s) 660
Kzo9I GATC 5 cut(s) 660, 727, 893, 1138, 1205
LguI GCTCTTC 1 cut(s) 458
LmnI GCTCC 7 cut(s) 33, 377, 627, 934, 978, 1248, 1339
Lsp1109I GCAGC 2 cut(s) 69, 1027
LweI GCATC 5 cut(s) 399, 694, 955, 990, 993
MaeI CTAG 2 cut(s) 200, 866
MaeII ACGT 3 cut(s) 8, 1182, 1377
MaeIII GTNAC 5 cut(s) 4, 479, 491, 1143, 1157
MalI GATC 5 cut(s) 662, 729, 895, 1140, 1207
MbiI CCGCTC 3 cut(s) 216, 1269, 1334
MboI GATC 5 cut(s) 660, 727, 893, 1138, 1205
MflI RGATCY 1 cut(s) 1138
MhlI GDGCHC 5 cut(s) 236, 375, 382, 606, 1245
MluCI AATT 3 cut(s) 876, 898, 936
MlyI GAGTC 2 cut(s) 152, 1319
MmeI TCCRAC 3 cut(s) 306, 310, 1206
MroXI GAANNNNTTC 1 cut(s) 819
MseI TTAA 3 cut(s) 120, 807, 1077
MslI CAYNNNNRTG 1 cut(s) 1376
MspI CCGG 2 cut(s) 706, 1297
MspR9I CCNGG 1 cut(s) 1364
MvaI CCWGG 1 cut(s) 1364
MvnI CGCG 3 cut(s) 47, 244, 434
MwoI GCNNNNNNNGC 4 cut(s) 196, 495, 847, 1012
NdeII GATC 5 cut(s) 660, 727, 893, 1138, 1205
NheI GCTAGC 1 cut(s) 865
NlaIII CATG 7 cut(s) 520, 560, 571, 667, 845, 850, 928
NlaIV GGNNCC 9 cut(s) 136, 234, 235, 334, 803, 913, 930, 1140, 1383
NmuCI GTSAC 3 cut(s) 4, 491, 1143
NspI RCATGY 1 cut(s) 845
OliI CACNNNNGTG 1 cut(s) 1376
PciSI GCTCTTC 1 cut(s) 458
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PdmI GAANNNNTTC 1 cut(s) 819
PfeI GAWTC 6 cut(s) 293, 340, 356, 714, 830, 1059
PinAI ACCGGT 1 cut(s) 1296
PkrI GCNGC 7 cut(s) 46, 59, 175, 178, 198, 488, 1017
PleI GAGTC 2 cut(s) 152, 1319
PpsI GAGTC 2 cut(s) 152, 1319
Ppu21I YACGTR 1 cut(s) 1378
PpuMI RGGWCCY 1 cut(s) 802
PsiI TTATAA 1 cut(s) 674
Psp124BI GAGCTC 2 cut(s) 375, 382
Psp5II RGGWCCY 1 cut(s) 802
Psp6I CCWGG 1 cut(s) 1362
PspGI CCWGG 1 cut(s) 1362
PspN4I GGNNCC 9 cut(s) 136, 234, 235, 334, 803, 913, 930, 1140, 1383
PspOMI GGGCCC 1 cut(s) 232
PspPI GGNCC 6 cut(s) 134, 232, 233, 392, 802, 1163
PspPPI RGGWCCY 1 cut(s) 802
PsuI RGATCY 1 cut(s) 1138
RsaI GTAC 2 cut(s) 923, 1370
RsaNI GTAC 2 cut(s) 922, 1369
RseI CAYNNNNRTG 1 cut(s) 1376
SacI GAGCTC 2 cut(s) 375, 382
SapI GCTCTTC 1 cut(s) 458
SaqAI TTAA 3 cut(s) 120, 807, 1077
SatI GCNGC 7 cut(s) 45, 58, 174, 177, 197, 487, 1016
Sau3AI GATC 5 cut(s) 660, 727, 893, 1138, 1205
Sau96I GGNCC 6 cut(s) 134, 232, 233, 392, 802, 1163
SchI GAGTC 2 cut(s) 152, 1319
ScrFI CCNGG 1 cut(s) 1364
SduI GDGCHC 5 cut(s) 236, 375, 382, 606, 1245
SfaNI GCATC 5 cut(s) 399, 694, 955, 990, 993
SinI GGWCC 1 cut(s) 802
SmiMI CAYNNNNRTG 1 cut(s) 1376
SmlI CTYRAG 1 cut(s) 105
SmoI CTYRAG 1 cut(s) 105
Sse9I AATT 3 cut(s) 876, 898, 936
SspMI CTAG 2 cut(s) 200, 866
SstI GAGCTC 2 cut(s) 375, 382
StyD4I CCNGG 1 cut(s) 1362
TaaI ACNGT 1 cut(s) 479
TaiI ACGT 3 cut(s) 11, 1185, 1380
TaqI TCGA 5 cut(s) 114, 291, 896, 1204, 1403
TaqII GACCGA 1 cut(s) 383
TasI AATT 3 cut(s) 876, 898, 936
TatI WGTACW 1 cut(s) 921
TauI GCSGC 5 cut(s) 47, 176, 179, 199, 489
TfiI GAWTC 6 cut(s) 293, 340, 356, 714, 830, 1059
Tru1I TTAA 3 cut(s) 120, 807, 1077
Tru9I TTAA 3 cut(s) 120, 807, 1077
TseFI GTSAC 3 cut(s) 4, 491, 1143
TseI GCWGC 2 cut(s) 57, 1015
Tsp45I GTSAC 3 cut(s) 4, 491, 1143
TspDTI ATGAA 4 cut(s) 533, 584, 601, 686
TspGWI ACGGA 2 cut(s) 693, 1131
VneI GTGCAC 1 cut(s) 602
VpaK11BI GGWCC 1 cut(s) 802
XapI RAATTY 2 cut(s) 898, 936
XceI RCATGY 1 cut(s) 845
XcmI CCANNNNNNNNNTGG 1 cut(s) 922
XmnI GAANNNNTTC 1 cut(s) 819
XspI CTAG 2 cut(s) 200, 866
ZraI GACGTC 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.