Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0003308

Physical Location & Seq

Genomic Coordinates Forward (+)

34205374 .. 34210325

Gene Structure 4952 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1207800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGGCTCAAGATACAAGTTCTGGCGCTGAATCGCCGCGGCCACGTTCTGGTCTGTTGCGGGATCAGGTTCAGCTTGTGAAAAGAAAGGACTGTGATCGATACGAGATTGTCCAAATTCCAGATGTCCTGTCATTTGAGAAAGGTTTCTTTATAGTAATTCGGGCGTGTCAGCAGTTGGCTCAAAAGAATGAGGGGATAATACTGGTTGGAGTGGCAGGCCCCTCTGGGGCTGGTAAAACTGTTTTCACTGAGAAAGTGCTCAACTTCATGCCCAGCATTGCTGTTATTACAATGGACAACTACAATGACGCTAGTCGAATCATCGATGGAAACTATGATGATCCACGCCTGACAGATTATGATTCATTGCTTGAAAACATACATGACTTAAAGGCAGGTAATCCTGTTCAGGTTCCAATATATGATTTCAAGACGAGCTCCCGCATAGGGTACAGAACAGTAGAGGCCCCTAGCTCCCGTATTGTGATCATTGAGGGCATATATGCTTTAAGTGAGAAATTGCGACCTTTGCTTGATCTTCGTGTATCTATAACTGGTGGAGTTCACTTTGACCTTGTAAAGCGGGTTTTAAGGGACATTCAACGTGCTGGCCAAGAGCCTGAAGAAATTATCCATCAAATTTCTGAAACGGTGTATCCTATGTACAAGGCCTTTATTGAGCCAGATCTTCAGACAGCACATATAAAAATCACCAACAAGTTTAATCCCTTCACTGGTTTTCAGAACCCTAGTTACATTTTAAAGTCAACAAAGGAAGTGACAGTGGATCAAATCAAGGCCGTTATATCGGAAGATCACAAAGAAAGAACAGAAGAAACTTATGACATATATCTTTTACCACCAGGTGAAGATCCTGAAGCGTGTCAGTCGTATCTAAGGATGAGGAACAGAGATGGCAAATACAATCTCATGTTTGAGGAGTGGGTTACAGATAGTCCCTTCATAATATCGCCCAGAATAACTTTTGAAGTTAGTGTACGCCTGCTTGGAGGTCTCATGGCCTTGGGGTATACAATTGCATCCATCTTGAAACGAAGCAGTCATATCTTCTGCGACGAGAAGGTTTGCGTGAAAACTGATTGGTTGGAGCAACTTAATCGTCAATATGTTCAGGTGCAAGGAAAGGATCGGTTATATGTTAAAGATATTGCACAGAAGCTCGGCCTGGATGGTTCATATGTTCCTCGTACTTACATCGAACAAATTCAGCTGGAGAAACTTGTAAATGATGTTATGGCCTTGCCAGATGATTTGAAGTCAAAGCTCAGCATAGATGATGATTTCGTTTTGAGCCCTAAGGAAGCCCTTTCCCGAGCTTCTGCAGATAGGAGAAACAAGTATCTCAACCGGGGTATATCACAGTCTTACTCAAATCAAAGGGACAAGACTATGTCCAAGCTAACAAAACTTACTGTTAACAGTAGAAGGTTTGATGGAAGAAACCCGGAATCACCTGCAGGAATTTCGAACCAGGGAATTATTACTCAACTTTCAGAACAAATTTCTACGCTGAATGAGAGGATGGATGAGTTTACATCCCGTGTTGAAGAGGTGAACTCCAAGATACCACTCAGAAGAGTTTCAGCAAGCCAGCAAAATTTGGCTCTGCAGGCCGAAGCTTGCAATGGATCCGGACCAACTTCTCTTTTTGTTACTAGCTTGAGTAATGGCTCGTTGGGAGGACCGCTCCTGCCCACTTCTTCGTCGTCCTCACAGTTGGTCAAGGATTCCCCACTGATGGAAGAGATACTAACCATCACACGAGGCCAACGGCAGATCATGCACCAAATAGACAATTTGAGCAATCTTCTGCGGGAGTATACGGCAGAGAGGTTTCGCCAAGGAAGAACAGATGCTACTGGAAGAATGCCTGATATCGAATCAGTTGTCCCACTTGTTCTTGCTTTGGCAATTGGCGGCTTAGGTGTCTTCTTCTTCAGGAGTCTGACTTCCCCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

CYTH PRK

Protein Analysis

661

Amino Acids

74.18

Weight (kDa)

6.28

Isoelectric Point (pI)

52.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	69 - 237	7.7e-24	Phosphoribulokinase / Uridine kinase family
CYTH	PF01928	262 - 405	1e-21	CYTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73980 AT1G73980 AT1G73980
fragaria_vesca	FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040
malus_domestica	MD06G1207600.v1.1 MD06G1207800.v1.1 MD14G1218200.v1.1
prunus_persica	Prupe.5G212000_v2.0.a1 Prupe.5G212000_v2.0.a1
pyrus_communis	pycom06g18560 pycom06g18570 pycom14g18090
rosa_chinensis	RchiOBHm_Chr7g0184091
rosa_laevigata	RLG00000005001
rosa_multiflora	Rmu_sc0004712.1_g000008 Rmu_sc0025350.1_g000011
rosa_roxburghii	Rroxscaffold_3G00269890
rosa_rugosa	Rorug06G0462800 Rorug06G0462900
rosa_samantha	Rh7AG082900 Rh7BG064100 Rh7CG064800 Rh7DG064300
rosa_wichuraiana	Rw7G005270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1483
Acc36I	ACCTGC	2 cut(s)	386, 1483
AccB7I	CCANNNNNTGG	1 cut(s)	47
AccBSI	CCGCTC	1 cut(s)	1708
AccI	GTMKAC	2 cut(s)	1031, 1841
AccII	CGCG	1 cut(s)	37
AccIII	TCCGGA	1 cut(s)	1652
AciI	CCGC	8 cut(s)	35, 37, 58, 442, 583, 1706, 1834, 1938
AclWI	GGATC	7 cut(s)	69, 335, 795, 866, 1155, 1644, 1657
AcoI	YGGCCR	2 cut(s)	38, 610
AcsI	RAATTY	6 cut(s)	114, 639, 1224, 1482, 1521, 1618
AcuI	CTGAAG	4 cut(s)	642, 674, 897, 1942
AdeI	CACNNNGTG	1 cut(s)	866
AfaI	GTAC	4 cut(s)	452, 665, 999, 1210
AfiI	CCNNNNNNNGG	5 cut(s)	47, 226, 447, 734, 1759
AgsI	TTSAA	7 cut(s)	374, 430, 602, 989, 1051, 1276, 1568
AjnI	CCWGG	3 cut(s)	862, 1185, 1491
Alw21I	GWGCWC	2 cut(s)	261, 440
Alw26I	GTCTC	1 cut(s)	1019
AlwI	GGATC	7 cut(s)	69, 335, 795, 866, 1155, 1644, 1657
Ama87I	CYCGRG	1 cut(s)	1332
Aor13HI	TCCGGA	1 cut(s)	1652
ApoI	RAATTY	6 cut(s)	114, 639, 1224, 1482, 1521, 1618
ArsI	GACNNNNNNTTYG	2 cut(s)	1893, 1925
Asp700I	GAANNNNTTC	3 cut(s)	143, 1224, 1600
AspLEI	GCGC	1 cut(s)	26
AspS9I	GGNCC	4 cut(s)	218, 466, 1655, 1703
AsuC2I	CCSGG	2 cut(s)	1370, 1466
AsuHPI	GGTGA	4 cut(s)	703, 878, 1464, 1585
AsuII	TTCGAA	1 cut(s)	1487
AvaI	CYCGRG	1 cut(s)	1332
AvaII	GGWCC	2 cut(s)	1655, 1703
AxyI	CCTNAGG	1 cut(s)	1317
BalI	TGGCCA	1 cut(s)	612
BamHI	GGATCC	1 cut(s)	1649
BanII	GRGCYC	2 cut(s)	440, 1316
BarI	GAAGNNNNNNTAC	2 cut(s)	981, 1013
BauI	CACGAG	1 cut(s)	1782
BbsI	GAAGAC	1 cut(s)	1942
Bbv12I	GWGCWC	2 cut(s)	261, 440
BccI	CCATC	9 cut(s)	320, 642, 908, 1052, 1184, 1448, 1537, 1753, 1784
BceAI	ACGGC	3 cut(s)	785, 1808, 1860
BcgI	CGANNNNNNTGC	4 cut(s)	1100, 1134, 1467, 1501
BciT130I	CCWGG	3 cut(s)	864, 1187, 1493
BciVI	GTATCC	1 cut(s)	666
BclI	TGATCA	1 cut(s)	486
BcnI	CCSGG	2 cut(s)	1370, 1466
BcoDI	GTCTC	1 cut(s)	1019
BfaI	CTAG	4 cut(s)	312, 471, 750, 1677
BfmI	CTRYAG	3 cut(s)	1341, 1476, 1628
BfoI	RGCGCY	1 cut(s)	27
BfuAI	ACCTGC	2 cut(s)	386, 1483
BfuI	GTATCC	1 cut(s)	666
BglII	AGATCT	1 cut(s)	685
BisI	GCNGC	3 cut(s)	35, 38, 1939
BlpI	GCTNAGC	1 cut(s)	1286
BlsI	GCNGC	3 cut(s)	36, 39, 1940
Bme1390I	CCNGG	5 cut(s)	864, 1187, 1370, 1466, 1493
Bme18I	GGWCC	2 cut(s)	1655, 1703
BmeT110I	CYCGRG	1 cut(s)	1332
BmgT120I	GGNCC	4 cut(s)	218, 466, 1655, 1703
BmiI	GGNNCC	4 cut(s)	220, 414, 468, 1651
BmrFI	CCNGG	5 cut(s)	864, 1187, 1370, 1466, 1493
BmsI	GCATC	2 cut(s)	1049, 1864
BoxI	GACNNNNGTC	1 cut(s)	312
BpiI	GAAGAC	1 cut(s)	1942
BplI	GAGNNNNNCTC	4 cut(s)	1562, 1594, 1692, 1724
BpmI	CTGGAG	1 cut(s)	1253
Bpu10I	CCTNAGC	1 cut(s)	1942
Bpu1102I	GCTNAGC	1 cut(s)	1286
Bpu14I	TTCGAA	1 cut(s)	1487
BpuEI	CTTGAG	1 cut(s)	1702
BpuMI	CCSGG	2 cut(s)	1370, 1466
Bsa29I	ATCGAT	2 cut(s)	97, 324
BsaI	GGTCTC	1 cut(s)	1019
BsaJI	CCNNGG	5 cut(s)	35, 1023, 1369, 1492, 1861
BsaWI	WCCGGW	1 cut(s)	1652
Bsc4I	CCNNNNNNNGG	5 cut(s)	47, 226, 447, 734, 1759
Bse1I	ACTGG	4 cut(s)	207, 559, 739, 1885
Bse21I	CCTNAGG	1 cut(s)	1317
Bse3DI	GCAATG	3 cut(s)	276, 365, 1651
BseAI	TCCGGA	1 cut(s)	1652
BseBI	CCWGG	3 cut(s)	864, 1187, 1493
BseCI	ATCGAT	2 cut(s)	97, 324
BseDI	CCNNGG	5 cut(s)	35, 1023, 1369, 1492, 1861
BseGI	GGATG	6 cut(s)	906, 1040, 1195, 1548, 1552, 1556
BseLI	CCNNNNNNNGG	5 cut(s)	47, 226, 447, 734, 1759
BseMI	GCAATG	3 cut(s)	276, 365, 1651
BseMII	CTCAG	3 cut(s)	240, 1300, 1606
BseNI	ACTGG	4 cut(s)	207, 559, 739, 1885
BseRI	GAGGAG	1 cut(s)	953
BseYI	CCCAGC	1 cut(s)	272
Bsh1236I	CGCG	1 cut(s)	37
BshVI	ATCGAT	2 cut(s)	97, 324
BsiHKAI	GWGCWC	2 cut(s)	261, 440
BsiHKCI	CYCGRG	1 cut(s)	1332
BsiSI	CCGG	3 cut(s)	1369, 1466, 1653
BslFI	GGGAC	4 cut(s)	608, 942, 1415, 1895
BslI	CCNNNNNNNGG	5 cut(s)	47, 226, 447, 734, 1759
BsmAI	GTCTC	1 cut(s)	1019
BsmFI	GGGAC	4 cut(s)	608, 942, 1415, 1895
BsmI	GAATGC	1 cut(s)	1893
Bso31I	GGTCTC	1 cut(s)	1019
BsoBI	CYCGRG	1 cut(s)	1332
Bsp119I	TTCGAA	1 cut(s)	1487
Bsp1286I	GDGCHC	3 cut(s)	261, 440, 1316
Bsp13I	TCCGGA	1 cut(s)	1652
Bsp1407I	TGTACA	1 cut(s)	663
Bsp1720I	GCTNAGC	1 cut(s)	1286
BspACI	CCGC	8 cut(s)	35, 37, 58, 442, 583, 1706, 1834, 1938
BspCNI	CTCAG	3 cut(s)	241, 1299, 1605
BspDI	ATCGAT	2 cut(s)	97, 324
BspEI	TCCGGA	1 cut(s)	1652
BspFNI	CGCG	1 cut(s)	37
BspLI	GGNNCC	4 cut(s)	220, 414, 468, 1651
BspMAI	CTGCAG	3 cut(s)	1345, 1480, 1632
BspMI	ACCTGC	2 cut(s)	386, 1483
BspPI	GGATC	7 cut(s)	69, 335, 795, 866, 1155, 1644, 1657
BspT104I	TTCGAA	1 cut(s)	1487
BspTNI	GGTCTC	1 cut(s)	1019
BsrBI	CCGCTC	1 cut(s)	1708
BsrDI	GCAATG	3 cut(s)	276, 365, 1651
BsrGI	TGTACA	1 cut(s)	663
BsrI	ACTGG	4 cut(s)	207, 559, 739, 1885
BssECI	CCNNGG	5 cut(s)	35, 1023, 1369, 1492, 1861
BssNAI	GTATAC	2 cut(s)	1032, 1842
BssSI	CACGAG	1 cut(s)	1782
BssT1I	CCWWGG	2 cut(s)	1023, 1861
Bst1107I	GTATAC	2 cut(s)	1032, 1842
Bst2BI	CACGAG	1 cut(s)	1782
Bst2UI	CCWGG	3 cut(s)	864, 1187, 1493
Bst4CI	ACNGT	9 cut(s)	92, 241, 460, 652, 784, 1383, 1435, 1442, 1737
Bst6I	CTCTTC	3 cut(s)	1563, 1591, 1758
BstAPI	GCANNNNNTGC	1 cut(s)	1801
BstAUI	TGTACA	1 cut(s)	663
BstBI	TTCGAA	1 cut(s)	1487
BstC8I	GCNNGC	7 cut(s)	217, 610, 1004, 1609, 1613, 1632, 1642
BstDEI	CTNAG	6 cut(s)	249, 896, 1286, 1317, 1592, 1942
BstDSI	CCRYGG	1 cut(s)	35
BstF5I	GGATG	6 cut(s)	906, 1040, 1195, 1548, 1552, 1556
BstFNI	CGCG	1 cut(s)	37
BstH2I	RGCGCY	1 cut(s)	27
BstHHI	GCGC	1 cut(s)	26
BstMAI	GTCTC	1 cut(s)	1019
BstMWI	GCNNNNNNNGC	3 cut(s)	529, 1631, 1801
BstNI	CCWGG	3 cut(s)	864, 1187, 1493
BstPAI	GACNNNNGTC	1 cut(s)	312
BstSCI	CCNGG	5 cut(s)	862, 1185, 1368, 1464, 1491
BstSFI	CTRYAG	3 cut(s)	1341, 1476, 1628
BstUI	CGCG	1 cut(s)	37
BstV2I	GAAGAC	1 cut(s)	1942
BstX2I	RGATCY	3 cut(s)	685, 871, 1649
BstYI	RGATCY	3 cut(s)	685, 871, 1649
BstZ17I	GTATAC	2 cut(s)	1032, 1842
Bsu15I	ATCGAT	2 cut(s)	97, 324
Bsu36I	CCTNAGG	1 cut(s)	1317
BsuI	GTATCC	1 cut(s)	666
BsuTUI	ATCGAT	2 cut(s)	97, 324
BtgI	CCRYGG	1 cut(s)	35
BtsCI	GGATG	6 cut(s)	906, 1040, 1195, 1548, 1552, 1556
BtsIMutI	CAGTG	4 cut(s)	246, 732, 789, 1754
BveI	ACCTGC	2 cut(s)	386, 1483
Cac8I	GCNNGC	7 cut(s)	217, 610, 1004, 1609, 1613, 1632, 1642
CfoI	GCGC	1 cut(s)	26
Cfr13I	GGNCC	4 cut(s)	218, 466, 1655, 1703
Cfr42I	CCGCGG	1 cut(s)	38
ClaI	ATCGAT	2 cut(s)	97, 324
CseI	GACGC	1 cut(s)	317
CsiI	ACCWGGT	1 cut(s)	862
Csp6I	GTAC	4 cut(s)	451, 664, 998, 1209
CviAII	CATG	5 cut(s)	268, 383, 931, 1018, 1801
CviQI	GTAC	4 cut(s)	451, 664, 998, 1209
DdeI	CTNAG	6 cut(s)	249, 896, 1286, 1317, 1592, 1942
DraI	TTTAAA	1 cut(s)	762
DraIII	CACNNNGTG	1 cut(s)	866
EaeI	YGGCCR	2 cut(s)	38, 610
Eam1104I	CTCTTC	3 cut(s)	1563, 1591, 1758
EarI	CTCTTC	3 cut(s)	1563, 1591, 1758
Ecl136II	GAGCTC	1 cut(s)	438
Eco130I	CCWWGG	2 cut(s)	1023, 1861
Eco147I	AGGCCT	1 cut(s)	671
Eco24I	GRGCYC	2 cut(s)	440, 1316
Eco31I	GGTCTC	1 cut(s)	1019
Eco32I	GATATC	1 cut(s)	1897
Eco47I	GGWCC	2 cut(s)	1655, 1703
Eco53kI	GAGCTC	1 cut(s)	438
Eco57I	CTGAAG	4 cut(s)	642, 674, 897, 1942
Eco81I	CCTNAGG	1 cut(s)	1317
Eco88I	CYCGRG	1 cut(s)	1332
EcoICRI	GAGCTC	1 cut(s)	438
EcoO109I	RGGNCCY	2 cut(s)	218, 466
EcoRII	CCWGG	3 cut(s)	862, 1185, 1491
EcoRV	GATATC	1 cut(s)	1897
EcoT14I	CCWWGG	2 cut(s)	1023, 1861
EcoT38I	GRGCYC	2 cut(s)	440, 1316
ErhI	CCWWGG	2 cut(s)	1023, 1861
FaeI	CATG	5 cut(s)	271, 386, 934, 1021, 1804
FaqI	GGGAC	4 cut(s)	608, 942, 1415, 1895
FatI	CATG	5 cut(s)	267, 382, 930, 1017, 1800
FauI	CCCGC	4 cut(s)	51, 449, 576, 1827
FauNDI	CATATG	1 cut(s)	1198
FbaI	TGATCA	1 cut(s)	486
FblI	GTMKAC	2 cut(s)	1031, 1841
Fnu4HI	GCNGC	3 cut(s)	35, 38, 1939
FokI	GGATG	6 cut(s)	913, 1027, 1202, 1543, 1555, 1559
FriOI	GRGCYC	2 cut(s)	440, 1316
Fsp4HI	GCNGC	3 cut(s)	35, 38, 1939
FspBI	CTAG	4 cut(s)	312, 471, 750, 1677
GlaI	GCGC	1 cut(s)	25
GluI	GCNGC	3 cut(s)	35, 38, 1939
GsaI	CCCAGC	1 cut(s)	276
GsuI	CTGGAG	1 cut(s)	1253
HaeII	RGCGCY	1 cut(s)	27
HapII	CCGG	3 cut(s)	1369, 1466, 1653
HgaI	GACGC	1 cut(s)	317
HhaI	GCGC	1 cut(s)	26
Hin1II	CATG	5 cut(s)	271, 386, 934, 1021, 1804
Hin6I	GCGC	1 cut(s)	24
HinP1I	GCGC	1 cut(s)	24
HincII	GTYRAC	2 cut(s)	768, 1438
HindII	GTYRAC	2 cut(s)	768, 1438
HindIII	AAGCTT	1 cut(s)	1638
HinfI	GANTC	7 cut(s)	29, 318, 362, 1469, 1748, 1901, 1963
HpaI	GTTAAC	1 cut(s)	1438
HpaII	CCGG	3 cut(s)	1369, 1466, 1653
HphI	GGTGA	4 cut(s)	703, 878, 1464, 1585
Hpy166II	GTNNAC	8 cut(s)	565, 768, 998, 1032, 1438, 1554, 1576, 1842
Hpy188I	TCNGA	7 cut(s)	646, 693, 744, 811, 1516, 1595, 1968
Hpy188III	TCNNGA	8 cut(s)	8, 119, 430, 875, 1048, 1332, 1653, 1960
Hpy8I	GTNNAC	8 cut(s)	565, 768, 998, 1032, 1438, 1554, 1576, 1842
Hpy99I	CGWCG	2 cut(s)	1079, 1729
HpyAV	CCTTC	4 cut(s)	739, 970, 1075, 1440
HpyCH4III	ACNGT	9 cut(s)	92, 241, 460, 652, 784, 1383, 1435, 1442, 1737
HpyCH4IV	ACGT	2 cut(s)	43, 604
HpyCH4V	TGCA	8 cut(s)	1040, 1138, 1172, 1343, 1478, 1630, 1644, 1804
HpyF10VI	GCNNNNNNNGC	3 cut(s)	529, 1631, 1801
HpyF3I	CTNAG	6 cut(s)	249, 896, 1286, 1317, 1592, 1942
HpySE526I	ACGT	2 cut(s)	43, 604
Hsp92II	CATG	5 cut(s)	271, 386, 934, 1021, 1804
HspAI	GCGC	1 cut(s)	24
Kpn2I	TCCGGA	1 cut(s)	1652
Ksp22I	TGATCA	1 cut(s)	486
KspAI	GTTAAC	1 cut(s)	1438
KspI	CCGCGG	1 cut(s)	38
LmnI	GCTCC	4 cut(s)	443, 479, 1108, 1713
LweI	GCATC	2 cut(s)	1049, 1864
MabI	ACCWGGT	1 cut(s)	862
MaeI	CTAG	4 cut(s)	312, 471, 750, 1677
MaeII	ACGT	2 cut(s)	43, 604
MaeIII	GTNAC	4 cut(s)	752, 778, 946, 1672
MbiI	CCGCTC	1 cut(s)	1708
MfeI	CAATTG	2 cut(s)	1035, 1932
MflI	RGATCY	3 cut(s)	685, 871, 1649
MhlI	GDGCHC	3 cut(s)	261, 440, 1316
MlsI	TGGCCA	1 cut(s)	612
MluNI	TGGCCA	1 cut(s)	612
MlyI	GAGTC	1 cut(s)	1972
MmeI	TCCRAC	2 cut(s)	187, 1086
Mox20I	TGGCCA	1 cut(s)	612
MroI	TCCGGA	1 cut(s)	1652
MroXI	GAANNNNTTC	3 cut(s)	143, 1224, 1600
MscI	TGGCCA	1 cut(s)	612
MseI	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1437
Msp20I	TGGCCA	1 cut(s)	612
MspA1I	CMGCKG	2 cut(s)	37, 1231
MspI	CCGG	3 cut(s)	1369, 1466, 1653
MspR9I	CCNGG	5 cut(s)	864, 1187, 1370, 1466, 1493
MunI	CAATTG	2 cut(s)	1035, 1932
Mva1269I	GAATGC	1 cut(s)	1893
MvaI	CCWGG	3 cut(s)	864, 1187, 1493
MvnI	CGCG	1 cut(s)	37
MwoI	GCNNNNNNNGC	3 cut(s)	529, 1631, 1801
NciI	CCSGG	2 cut(s)	1370, 1466
NdeI	CATATG	1 cut(s)	1198
NlaIII	CATG	5 cut(s)	271, 386, 934, 1021, 1804
NlaIV	GGNNCC	4 cut(s)	220, 414, 468, 1651
NmeAIII	GCCGAG	1 cut(s)	1161
NmuCI	GTSAC	1 cut(s)	778
NspV	TTCGAA	1 cut(s)	1487
PaqCI	CACCTGC	1 cut(s)	1483
PceI	AGGCCT	1 cut(s)	671
PctI	GAATGC	1 cut(s)	1893
PdmI	GAANNNNTTC	3 cut(s)	143, 1224, 1600
PfeI	GAWTC	6 cut(s)	29, 318, 362, 1469, 1748, 1901
PflFI	GACNNNGTC	1 cut(s)	1411
PflMI	CCANNNNNTGG	1 cut(s)	47
PkrI	GCNGC	3 cut(s)	36, 39, 1940
PleI	GAGTC	1 cut(s)	1971
PpsI	GAGTC	1 cut(s)	1971
PshAI	GACNNNNGTC	1 cut(s)	312
Psp124BI	GAGCTC	1 cut(s)	440
Psp6I	CCWGG	3 cut(s)	862, 1185, 1491
PspFI	CCCAGC	1 cut(s)	272
PspGI	CCWGG	3 cut(s)	862, 1185, 1491
PspN4I	GGNNCC	4 cut(s)	220, 414, 468, 1651
PspPI	GGNCC	4 cut(s)	218, 466, 1655, 1703
PsrI	GAACNNNNNNTAC	4 cut(s)	737, 769, 1861, 1893
PstI	CTGCAG	3 cut(s)	1345, 1480, 1632
PsuI	RGATCY	3 cut(s)	685, 871, 1649
PsyI	GACNNNGTC	1 cut(s)	1411
PvuII	CAGCTG	1 cut(s)	1231
RsaI	GTAC	4 cut(s)	452, 665, 999, 1210
RsaNI	GTAC	4 cut(s)	451, 664, 998, 1209
SacI	GAGCTC	1 cut(s)	440
SacII	CCGCGG	1 cut(s)	38
SaqAI	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1437
SatI	GCNGC	3 cut(s)	35, 38, 1939
Sau96I	GGNCC	4 cut(s)	218, 466, 1655, 1703
SbfI	CCTGCAGG	1 cut(s)	1480
SchI	GAGTC	1 cut(s)	1972
ScrFI	CCNGG	5 cut(s)	864, 1187, 1370, 1466, 1493
SdaI	CCTGCAGG	1 cut(s)	1480
SduI	GDGCHC	3 cut(s)	261, 440, 1316
SexAI	ACCWGGT	1 cut(s)	862
SfaNI	GCATC	2 cut(s)	1049, 1864
SfcI	CTRYAG	3 cut(s)	1341, 1476, 1628
Sfr303I	CCGCGG	1 cut(s)	38
SfuI	TTCGAA	1 cut(s)	1487
SgrBI	CCGCGG	1 cut(s)	38
SinI	GGWCC	2 cut(s)	1655, 1703
SmlI	CTYRAG	2 cut(s)	6, 1681
SmoI	CTYRAG	2 cut(s)	6, 1681
Sse8387I	CCTGCAGG	1 cut(s)	1480
SseBI	AGGCCT	1 cut(s)	671
SsiI	CCGC	8 cut(s)	35, 37, 58, 442, 583, 1706, 1834, 1938
SspMI	CTAG	4 cut(s)	312, 471, 750, 1677
SstI	GAGCTC	1 cut(s)	440
StuI	AGGCCT	1 cut(s)	671
StyD4I	CCNGG	5 cut(s)	862, 1185, 1368, 1464, 1491
StyI	CCWWGG	2 cut(s)	1023, 1861
TaaI	ACNGT	9 cut(s)	92, 241, 460, 652, 784, 1383, 1435, 1442, 1737
TaiI	ACGT	2 cut(s)	46, 607
TaqI	TCGA	6 cut(s)	97, 316, 324, 1218, 1487, 1899
TatI	WGTACW	1 cut(s)	663
TauI	GCSGC	3 cut(s)	37, 40, 1941
TfiI	GAWTC	6 cut(s)	29, 318, 362, 1469, 1748, 1901
Tru1I	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1437
Tru9I	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1437
TscAI	CASTG	4 cut(s)	253, 739, 789, 1761
TseFI	GTSAC	1 cut(s)	778
Tsp45I	GTSAC	1 cut(s)	778
TspDTI	ATGAA	4 cut(s)	256, 354, 952, 1185
TspRI	CASTG	4 cut(s)	253, 739, 789, 1761
Tth111I	GACNNNGTC	1 cut(s)	1411
Van91I	CCANNNNNTGG	1 cut(s)	47
VpaK11BI	GGWCC	2 cut(s)	1655, 1703
XapI	RAATTY	6 cut(s)	114, 639, 1224, 1482, 1521, 1618
XmiI	GTMKAC	2 cut(s)	1031, 1841
XmnI	GAANNNNTTC	3 cut(s)	143, 1224, 1600
XspI	CTAG	4 cut(s)	312, 471, 750, 1677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.