Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0003308

Physical Location & Seq

Genomic Coordinates Forward (+)

30138834 .. 30143453

Gene Structure 4620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1218200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGTTCAAGATACAAGTTCTGGTGCTGAATCACCGCGGCTGCGCACTGGTCTGTTGCGGGATCAGGTGCAGCTTGTGAAGAGAAAGGAGTGTGATCGTTATGAGATTGTCCAAATTCCAGATGTCCTGTCATTTGAGAAAGGTTTCTTTATAGTTATTCGGGCGTGTCAGCTGTTGGCTCAAAAGAATGAGGGGATAATACTAGTTGGAGTGGCAGGCCCCTCTGGAGCTGGTAAGACTGTTTTCACTGACAAAATGCTCAACTTCATGCCCAGCATTGCAGTTATTGCAATGGACAACTACAATGACGCTAGTCGAATCATCGATGGCAACTTTGATGATCCACGCCTGACAGATTATGAAACATTGCTTGAAAATATACATGGTTTAAAGGCAGGCAATCCTGTTCAGGTTCCAGTATATGATTTCAAGACTAGCTCCCGCATAGCGTACAGGACAGTAGAGGTCCCTAGCTCCCGTATTGTGATCATTGAGGGCATATATGCTTTAAGTGAGAAATTGCGACCTTTGCTAGATCTTCGTGTATCTATAACTGGTGGAGTTCACTTTGACCTTGTAAAGCGGGTTTTAAGGGACATTCAGCGTGCTGGCCAAGAGCCTGAAGAAATTATCCATCAAATTTCTGAGACGGTGTATCCTATGTACAAGGCCTTTATTGAGCCAGACCTTCAGACAGCACATATAAAAATCACCAACAAGTTTAATCCCTTCACTGGTTTTCAGAACCCTATTTATATTTTAAAGTCAACGAAGGCAGTGACAGTGGATCAAATCAAGGCTGTTATATCTGCAGATCACAAAGAAAGCACAGAAGAAACTTATGACATATATCTTTTACCACCAGGAGAAGATCCTGAAGCGTGTCAGTCGTATCTAAGGATGAGGAACAGAGATGGCAAATACAATCTCATGTTTGAGGAGTGGGTCACAGATAGTCCCTTCATAATATCTCCCAGAATAACTTTTGAAGTTAGTGTGCGCCTTCTTGGAGGTCTCATGGCCTTGGGGTATACAATTGCATCCATCTTGAAAAGAAGCAGCCATATCTTCTGCGACGAGAAGGTTTGCGTGAAAACTGATTGGTTGGAGCAACTTAATCGTCAATATGTTCAGGTGCAAGGAAAGGATCGGTTACATGTTAAAGATATTGCACAGCAGCTCGGCCTGGATGGTTCATATGTTCCTCGTACTTACATCGAACAAATTCAGCTGGAGAAACTTGTAAATGATGTTATGACATTGCCAGATGATTTGAAATCAAAGCTCAGCATAGATGATGATTCTTCGAGCCCTAAGGAAGCGCTTTCCCGAGCCTCAGCTGATCGGAGAAACAAGTATCTCAACCGGGGTATATCGCAGTCTTACTCGAATCAAAGGGACAAGACTATTTCCAAACTAACGAGACTTGCTGTTAACAGCAGAAGGTTTGATGGACGAAACCCAGTATCACCTGCAGCAATTTCGAACCAGGGAATTTTTACTCAACTTTCAGAACAAATTTCTACGCTGAATGAGAGGATGGACGAGTTTACATCCCGTGTTGAAGAGGTGAACTCCAAGATATCACTCAGAAGAGCTTCAGCTAGCCAGCAAAATTTGGCTCTGCAGGCCAAAGCCTGCAATGGATCCGAACCAACTTCTCTGTTTGTTACTGGCTTGAGTAATGGCTCGTTGGCAGGAACGCTACTGCCCAATTCTTCGTCGTCCTCCCAGTTGGTCAAGGATTCCCCACTGATGGAAGAGATACTAGCCATCACACGAGGCCAACGGCAGATCATGCACCAAATAGACAATTTGAGCAATCTTCTGCGAGAGTATACGGCAGAGAGGGTTCGCCAAGGAAGAACAGATACTGCTGGAAGAATGCCTGATATCGAATCAGTTGTCCCACTTGTTCTTGCTTTGGCGATTGGCGGTTTAGGTGTCTTCTTCTTCAGGGGTCTGACTTCTCCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

CYTH PRK

Protein Analysis

660

Amino Acids

73.8

Weight (kDa)

7.09

Isoelectric Point (pI)

50.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	69 - 237	2.6e-23	Phosphoribulokinase / Uridine kinase family
CYTH	PF01928	271 - 405	5.9e-22	CYTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73980 AT1G73980 AT1G73980
fragaria_vesca	FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040
malus_domestica	MD06G1207600.v1.1 MD06G1207800.v1.1 MD14G1218200.v1.1
prunus_persica	Prupe.5G212000_v2.0.a1 Prupe.5G212000_v2.0.a1
pyrus_communis	pycom06g18560 pycom06g18570 pycom14g18090
rosa_chinensis	RchiOBHm_Chr7g0184091
rosa_laevigata	RLG00000005001
rosa_multiflora	Rmu_sc0004712.1_g000008 Rmu_sc0025350.1_g000011
rosa_roxburghii	Rroxscaffold_3G00269890
rosa_rugosa	Rorug06G0462800 Rorug06G0462900
rosa_samantha	Rh7AG082900 Rh7BG064100 Rh7CG064800 Rh7DG064300
rosa_wichuraiana	Rw7G005270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1480
Acc16I	TGCGCA	1 cut(s)	44
Acc36I	ACCTGC	1 cut(s)	1480
AccI	GTMKAC	2 cut(s)	1031, 1838
AccII	CGCG	1 cut(s)	37
AciI	CCGC	6 cut(s)	35, 37, 58, 442, 583, 1935
AclWI	GGATC	7 cut(s)	69, 335, 795, 866, 1155, 1641, 1654
AcoI	YGGCCR	1 cut(s)	610
AcsI	RAATTY	6 cut(s)	114, 639, 1224, 1494, 1518, 1615
AcuI	CTGAAG	5 cut(s)	642, 674, 897, 1584, 1939
AfaI	GTAC	3 cut(s)	452, 665, 1210
AfeI	AGCGCT	1 cut(s)	1323
AfiI	CCNNNNNNNGG	2 cut(s)	734, 1756
AflIII	ACRYGT	1 cut(s)	1156
AgsI	TTSAA	7 cut(s)	8, 374, 430, 989, 1051, 1276, 1565
AhlI	ACTAGT	1 cut(s)	202
AjnI	CCWGG	3 cut(s)	862, 1185, 1488
Alw26I	GTCTC	3 cut(s)	641, 1019, 1417
AlwI	GGATC	7 cut(s)	69, 335, 795, 866, 1155, 1641, 1654
AlwNI	CAGNNNCTG	1 cut(s)	1874
Ama87I	CYCGRG	1 cut(s)	1329
Aor51HI	AGCGCT	1 cut(s)	1323
AoxI	GGCC	7 cut(s)	217, 610, 669, 1020, 1183, 1629, 1783
ApeKI	GCWGC	5 cut(s)	40, 70, 1059, 1177, 1475
ApoI	RAATTY	6 cut(s)	114, 639, 1224, 1494, 1518, 1615
ArsI	GACNNNNNNTTYG	2 cut(s)	1890, 1922
Asp700I	GAANNNNTTC	3 cut(s)	143, 1224, 1597
AspLEI	GCGC	3 cut(s)	45, 1002, 1324
AspS9I	GGNCC	2 cut(s)	218, 466
AsuC2I	CCSGG	1 cut(s)	1367
AsuHPI	GGTGA	4 cut(s)	24, 703, 1461, 1582
AsuII	TTCGAA	1 cut(s)	1484
AsuNHI	GCTAGC	1 cut(s)	1604
AvaI	CYCGRG	1 cut(s)	1329
AvaII	GGWCC	1 cut(s)	466
AxyI	CCTNAGG	1 cut(s)	1314
BalI	TGGCCA	1 cut(s)	612
BamHI	GGATCC	1 cut(s)	1646
BanII	GRGCYC	1 cut(s)	1313
BarI	GAAGNNNNNNTAC	2 cut(s)	1855, 1887
BauI	CACGAG	1 cut(s)	1779
BbsI	GAAGAC	1 cut(s)	1939
BbvCI	CCTCAGC	1 cut(s)	1336
BbvI	GCAGC	5 cut(s)	27, 82, 1071, 1189, 1487
BccI	CCATC	9 cut(s)	320, 642, 908, 1052, 1184, 1445, 1534, 1750, 1781
BceAI	ACGGC	2 cut(s)	1805, 1857
BcgI	CGANNNNNNTGC	4 cut(s)	1100, 1134, 1464, 1498
BciT130I	CCWGG	3 cut(s)	864, 1187, 1490
BciVI	GTATCC	1 cut(s)	666
BclI	TGATCA	1 cut(s)	486
BcnI	CCSGG	1 cut(s)	1367
BcoDI	GTCTC	3 cut(s)	641, 1019, 1417
BcuI	ACTAGT	1 cut(s)	202
BfaI	CTAG	7 cut(s)	203, 312, 435, 471, 533, 1605, 1769
BfmI	CTRYAG	3 cut(s)	810, 1473, 1625
BfoI	RGCGCY	1 cut(s)	1325
BfuAI	ACCTGC	1 cut(s)	1480
BfuI	GTATCC	1 cut(s)	666
BglII	AGATCT	1 cut(s)	535
BisI	GCNGC	6 cut(s)	38, 41, 71, 1060, 1178, 1476
BlpI	GCTNAGC	1 cut(s)	1286
BlsI	GCNGC	6 cut(s)	39, 42, 72, 1061, 1179, 1477
Bme1390I	CCNGG	4 cut(s)	864, 1187, 1367, 1490
Bme18I	GGWCC	1 cut(s)	466
BmeT110I	CYCGRG	1 cut(s)	1329
BmgT120I	GGNCC	2 cut(s)	218, 466
BmiI	GGNNCC	4 cut(s)	220, 414, 468, 1648
BmrFI	CCNGG	4 cut(s)	864, 1187, 1367, 1490
BmrI	ACTGGG	2 cut(s)	1457, 1726
BmsI	GCATC	1 cut(s)	1049
BmtI	GCTAGC	1 cut(s)	1608
BmuI	ACTGGG	2 cut(s)	1457, 1726
BoxI	GACNNNNGTC	1 cut(s)	312
BpiI	GAAGAC	1 cut(s)	1939
BplI	GAGNNNNNCTC	2 cut(s)	1559, 1591
BpmI	CTGGAG	2 cut(s)	246, 1253
Bpu10I	CCTNAGC	1 cut(s)	1336
Bpu1102I	GCTNAGC	1 cut(s)	1286
Bpu14I	TTCGAA	1 cut(s)	1484
BpuEI	CTTGAG	1 cut(s)	1699
BpuMI	CCSGG	1 cut(s)	1367
Bsa29I	ATCGAT	1 cut(s)	324
BsaI	GGTCTC	1 cut(s)	1019
BsaJI	CCNNGG	5 cut(s)	35, 1023, 1366, 1489, 1858
Bsc4I	CCNNNNNNNGG	2 cut(s)	734, 1756
Bse1I	ACTGG	7 cut(s)	52, 416, 559, 739, 1463, 1678, 1732
Bse21I	CCTNAGG	1 cut(s)	1314
Bse3DI	GCAATG	5 cut(s)	276, 297, 365, 1259, 1648
BseBI	CCWGG	3 cut(s)	864, 1187, 1490
BseCI	ATCGAT	1 cut(s)	324
BseDI	CCNNGG	5 cut(s)	35, 1023, 1366, 1489, 1858
BseGI	GGATG	5 cut(s)	906, 1040, 1195, 1545, 1553
BseLI	CCNNNNNNNGG	2 cut(s)	734, 1756
BseMI	GCAATG	5 cut(s)	276, 297, 365, 1259, 1648
BseMII	CTCAG	4 cut(s)	636, 1300, 1350, 1603
BseNI	ACTGG	7 cut(s)	52, 416, 559, 739, 1463, 1678, 1732
BseRI	GAGGAG	1 cut(s)	953
BseXI	GCAGC	5 cut(s)	27, 82, 1071, 1189, 1487
BseYI	CCCAGC	1 cut(s)	272
BsgI	GTGCAG	1 cut(s)	89
Bsh1236I	CGCG	1 cut(s)	37
BshFI	GGCC	7 cut(s)	219, 612, 671, 1022, 1185, 1631, 1785
BshVI	ATCGAT	1 cut(s)	324
BsiHKCI	CYCGRG	1 cut(s)	1329
BsiSI	CCGG	1 cut(s)	1366
BslFI	GGGAC	5 cut(s)	452, 608, 942, 1412, 1892
BslI	CCNNNNNNNGG	2 cut(s)	734, 1756
BsmAI	GTCTC	3 cut(s)	641, 1019, 1417
BsmBI	CGTCTC	1 cut(s)	641
BsmFI	GGGAC	5 cut(s)	452, 608, 942, 1412, 1892
BsmI	GAATGC	1 cut(s)	1890
BsnI	GGCC	7 cut(s)	219, 612, 671, 1022, 1185, 1631, 1785
Bso31I	GGTCTC	1 cut(s)	1019
BsoBI	CYCGRG	1 cut(s)	1329
Bsp119I	TTCGAA	1 cut(s)	1484
Bsp1286I	GDGCHC	1 cut(s)	1313
Bsp1407I	TGTACA	1 cut(s)	663
Bsp1720I	GCTNAGC	1 cut(s)	1286
BspACI	CCGC	6 cut(s)	35, 37, 58, 442, 583, 1935
BspANI	GGCC	7 cut(s)	219, 612, 671, 1022, 1185, 1631, 1785
BspCNI	CTCAG	4 cut(s)	637, 1299, 1349, 1602
BspDI	ATCGAT	1 cut(s)	324
BspFNI	CGCG	1 cut(s)	37
BspLI	GGNNCC	4 cut(s)	220, 414, 468, 1648
BspMAI	CTGCAG	3 cut(s)	814, 1477, 1629
BspMI	ACCTGC	1 cut(s)	1480
BspOI	GCTAGC	1 cut(s)	1608
BspPI	GGATC	7 cut(s)	69, 335, 795, 866, 1155, 1641, 1654
BspQI	GCTCTTC	1 cut(s)	1588
BspT104I	TTCGAA	1 cut(s)	1484
BspTNI	GGTCTC	1 cut(s)	1019
BsrDI	GCAATG	5 cut(s)	276, 297, 365, 1259, 1648
BsrGI	TGTACA	1 cut(s)	663
BsrI	ACTGG	7 cut(s)	52, 416, 559, 739, 1463, 1678, 1732
BssECI	CCNNGG	5 cut(s)	35, 1023, 1366, 1489, 1858
BssNAI	GTATAC	2 cut(s)	1032, 1839
BssSI	CACGAG	1 cut(s)	1779
BssT1I	CCWWGG	2 cut(s)	1023, 1858
Bst1107I	GTATAC	2 cut(s)	1032, 1839
Bst2BI	CACGAG	1 cut(s)	1779
Bst2UI	CCWGG	3 cut(s)	864, 1187, 1490
Bst4CI	ACNGT	4 cut(s)	241, 460, 652, 784
Bst6I	CTCTTC	4 cut(s)	74, 1560, 1588, 1755
BstAPI	GCANNNNNTGC	2 cut(s)	287, 1798
BstAUI	TGTACA	1 cut(s)	663
BstBI	TTCGAA	1 cut(s)	1484
BstC8I	GCNNGC	8 cut(s)	217, 397, 606, 610, 1606, 1610, 1629, 1639
BstDEI	CTNAG	6 cut(s)	645, 896, 1286, 1314, 1336, 1589
BstDSI	CCRYGG	1 cut(s)	35
BstF5I	GGATG	5 cut(s)	906, 1040, 1195, 1545, 1553
BstFNI	CGCG	1 cut(s)	37
BstH2I	RGCGCY	1 cut(s)	1325
BstHHI	GCGC	3 cut(s)	45, 1002, 1324
BstMAI	GTCTC	3 cut(s)	641, 1019, 1417
BstMWI	GCNNNNNNNGC	4 cut(s)	287, 529, 1628, 1798
BstNI	CCWGG	3 cut(s)	864, 1187, 1490
BstNSI	RCATGY	1 cut(s)	1160
BstPAI	GACNNNNGTC	1 cut(s)	312
BstSCI	CCNGG	4 cut(s)	862, 1185, 1365, 1488
BstSFI	CTRYAG	3 cut(s)	810, 1473, 1625
BstUI	CGCG	1 cut(s)	37
BstV1I	GCAGC	5 cut(s)	27, 82, 1071, 1189, 1487
BstV2I	GAAGAC	1 cut(s)	1939
BstX2I	RGATCY	3 cut(s)	535, 871, 1646
BstYI	RGATCY	3 cut(s)	535, 871, 1646
BstZ17I	GTATAC	2 cut(s)	1032, 1839
Bsu15I	ATCGAT	1 cut(s)	324
Bsu36I	CCTNAGG	1 cut(s)	1314
BsuI	GTATCC	1 cut(s)	666
BsuRI	GGCC	7 cut(s)	219, 612, 671, 1022, 1185, 1631, 1785
BsuTUI	ATCGAT	1 cut(s)	324
BtgI	CCRYGG	1 cut(s)	35
BtsCI	GGATG	5 cut(s)	906, 1040, 1195, 1545, 1553
BtsI	GCAGTG	1 cut(s)	783
BtsIMutI	CAGTG	6 cut(s)	45, 246, 732, 783, 789, 1751
BveI	ACCTGC	1 cut(s)	1480
Cac8I	GCNNGC	8 cut(s)	217, 397, 606, 610, 1606, 1610, 1629, 1639
CaiI	CAGNNNCTG	1 cut(s)	1874
CfoI	GCGC	3 cut(s)	45, 1002, 1324
Cfr13I	GGNCC	2 cut(s)	218, 466
Cfr42I	CCGCGG	1 cut(s)	38
ClaI	ATCGAT	1 cut(s)	324
CseI	GACGC	1 cut(s)	317
Csp6I	GTAC	3 cut(s)	451, 664, 1209
CviAII	CATG	6 cut(s)	268, 383, 931, 1018, 1157, 1798
CviQI	GTAC	3 cut(s)	451, 664, 1209
DdeI	CTNAG	6 cut(s)	645, 896, 1286, 1314, 1336, 1589
DraI	TTTAAA	2 cut(s)	390, 762
EaeI	YGGCCR	1 cut(s)	610
Eam1104I	CTCTTC	4 cut(s)	74, 1560, 1588, 1755
EarI	CTCTTC	4 cut(s)	74, 1560, 1588, 1755
Eco130I	CCWWGG	2 cut(s)	1023, 1858
Eco147I	AGGCCT	1 cut(s)	671
Eco24I	GRGCYC	1 cut(s)	1313
Eco31I	GGTCTC	1 cut(s)	1019
Eco32I	GATATC	2 cut(s)	1584, 1894
Eco47I	GGWCC	1 cut(s)	466
Eco47III	AGCGCT	1 cut(s)	1323
Eco57I	CTGAAG	5 cut(s)	642, 674, 897, 1584, 1939
Eco81I	CCTNAGG	1 cut(s)	1314
Eco88I	CYCGRG	1 cut(s)	1329
EcoO109I	RGGNCCY	2 cut(s)	218, 466
EcoRII	CCWGG	3 cut(s)	862, 1185, 1488
EcoRV	GATATC	2 cut(s)	1584, 1894
EcoT14I	CCWWGG	2 cut(s)	1023, 1858
EcoT38I	GRGCYC	1 cut(s)	1313
ErhI	CCWWGG	2 cut(s)	1023, 1858
Esp3I	CGTCTC	1 cut(s)	641
FaeI	CATG	6 cut(s)	271, 386, 934, 1021, 1160, 1801
FaqI	GGGAC	5 cut(s)	452, 608, 942, 1412, 1892
FatI	CATG	6 cut(s)	267, 382, 930, 1017, 1156, 1797
FauI	CCCGC	3 cut(s)	51, 449, 576
FauNDI	CATATG	1 cut(s)	1198
FbaI	TGATCA	1 cut(s)	486
FblI	GTMKAC	2 cut(s)	1031, 1838
Fnu4HI	GCNGC	6 cut(s)	38, 41, 71, 1060, 1178, 1476
FokI	GGATG	5 cut(s)	913, 1027, 1202, 1540, 1552
FriOI	GRGCYC	1 cut(s)	1313
Fsp4HI	GCNGC	6 cut(s)	38, 41, 71, 1060, 1178, 1476
FspBI	CTAG	7 cut(s)	203, 312, 435, 471, 533, 1605, 1769
FspI	TGCGCA	1 cut(s)	44
GlaI	GCGC	3 cut(s)	44, 1001, 1323
GluI	GCNGC	6 cut(s)	38, 41, 71, 1060, 1178, 1476
GsaI	CCCAGC	1 cut(s)	276
GsuI	CTGGAG	2 cut(s)	246, 1253
HaeII	RGCGCY	1 cut(s)	1325
HaeIII	GGCC	7 cut(s)	219, 612, 671, 1022, 1185, 1631, 1785
HapII	CCGG	1 cut(s)	1366
HgaI	GACGC	1 cut(s)	317
HhaI	GCGC	3 cut(s)	45, 1002, 1324
Hin1II	CATG	6 cut(s)	271, 386, 934, 1021, 1160, 1801
Hin6I	GCGC	3 cut(s)	43, 1000, 1322
HinP1I	GCGC	3 cut(s)	43, 1000, 1322
HincII	GTYRAC	2 cut(s)	768, 1435
HindII	GTYRAC	2 cut(s)	768, 1435
HinfI	GANTC	6 cut(s)	29, 318, 1301, 1390, 1745, 1898
HpaI	GTTAAC	1 cut(s)	1435
HpaII	CCGG	1 cut(s)	1366
HphI	GGTGA	4 cut(s)	24, 703, 1461, 1582
Hpy166II	GTNNAC	7 cut(s)	565, 768, 1032, 1435, 1551, 1573, 1839
Hpy188I	TCNGA	8 cut(s)	646, 693, 744, 1347, 1513, 1592, 1651, 1965
Hpy188III	TCNNGA	7 cut(s)	8, 119, 225, 430, 875, 1048, 1329
Hpy8I	GTNNAC	7 cut(s)	565, 768, 1032, 1435, 1551, 1573, 1839
Hpy99I	CGWCG	2 cut(s)	1079, 1726
HpyAV	CCTTC	7 cut(s)	698, 739, 766, 970, 1013, 1075, 1437
HpyCH4III	ACNGT	4 cut(s)	241, 460, 652, 784
HpyF10VI	GCNNNNNNNGC	4 cut(s)	287, 529, 1628, 1798
HpyF3I	CTNAG	6 cut(s)	645, 896, 1286, 1314, 1336, 1589
Hsp92II	CATG	6 cut(s)	271, 386, 934, 1021, 1160, 1801
HspAI	GCGC	3 cut(s)	43, 1000, 1322
Ksp22I	TGATCA	1 cut(s)	486
KspAI	GTTAAC	1 cut(s)	1435
KspI	CCGCGG	1 cut(s)	38
LguI	GCTCTTC	1 cut(s)	1588
LmnI	GCTCC	4 cut(s)	227, 443, 479, 1108
Lsp1109I	GCAGC	5 cut(s)	27, 82, 1071, 1189, 1487
LweI	GCATC	1 cut(s)	1049
MaeI	CTAG	7 cut(s)	203, 312, 435, 471, 533, 1605, 1769
MaeIII	GTNAC	4 cut(s)	778, 946, 1152, 1669
MfeI	CAATTG	1 cut(s)	1035
MflI	RGATCY	3 cut(s)	535, 871, 1646
MhlI	GDGCHC	1 cut(s)	1313
MlsI	TGGCCA	1 cut(s)	612
MluNI	TGGCCA	1 cut(s)	612
MmeI	TCCRAC	2 cut(s)	187, 1086
Mox20I	TGGCCA	1 cut(s)	612
MroXI	GAANNNNTTC	3 cut(s)	143, 1224, 1597
MscI	TGGCCA	1 cut(s)	612
MseI	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1434
Msp20I	TGGCCA	1 cut(s)	612
MspA1I	CMGCKG	4 cut(s)	37, 172, 1231, 1340
MspI	CCGG	1 cut(s)	1366
MspR9I	CCNGG	4 cut(s)	864, 1187, 1367, 1490
MunI	CAATTG	1 cut(s)	1035
Mva1269I	GAATGC	1 cut(s)	1890
MvaI	CCWGG	3 cut(s)	864, 1187, 1490
MvnI	CGCG	1 cut(s)	37
MwoI	GCNNNNNNNGC	4 cut(s)	287, 529, 1628, 1798
NciI	CCSGG	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1198
NheI	GCTAGC	1 cut(s)	1604
NlaIII	CATG	6 cut(s)	271, 386, 934, 1021, 1160, 1801
NlaIV	GGNNCC	4 cut(s)	220, 414, 468, 1648
NmeAIII	GCCGAG	1 cut(s)	1161
NmuCI	GTSAC	2 cut(s)	778, 946
NsbI	TGCGCA	1 cut(s)	44
NspI	RCATGY	1 cut(s)	1160
NspV	TTCGAA	1 cut(s)	1484
PaqCI	CACCTGC	1 cut(s)	1480
PceI	AGGCCT	1 cut(s)	671
PciI	ACATGT	1 cut(s)	1156
PciSI	GCTCTTC	1 cut(s)	1588
PctI	GAATGC	1 cut(s)	1890
PdmI	GAANNNNTTC	3 cut(s)	143, 1224, 1597
PfeI	GAWTC	6 cut(s)	29, 318, 1301, 1390, 1745, 1898
PkrI	GCNGC	6 cut(s)	39, 42, 72, 1061, 1179, 1477
PpuMI	RGGWCCY	1 cut(s)	466
PscI	ACATGT	1 cut(s)	1156
PshAI	GACNNNNGTC	1 cut(s)	312
Psp5II	RGGWCCY	1 cut(s)	466
Psp6I	CCWGG	3 cut(s)	862, 1185, 1488
PspFI	CCCAGC	1 cut(s)	272
PspGI	CCWGG	3 cut(s)	862, 1185, 1488
PspN4I	GGNNCC	4 cut(s)	220, 414, 468, 1648
PspPI	GGNCC	2 cut(s)	218, 466
PspPPI	RGGWCCY	1 cut(s)	466
PstI	CTGCAG	3 cut(s)	814, 1477, 1629
PstNI	CAGNNNCTG	1 cut(s)	1874
PsuI	RGATCY	3 cut(s)	535, 871, 1646
PvuII	CAGCTG	3 cut(s)	172, 1231, 1340
RsaI	GTAC	3 cut(s)	452, 665, 1210
RsaNI	GTAC	3 cut(s)	451, 664, 1209
SacII	CCGCGG	1 cut(s)	38
SapI	GCTCTTC	1 cut(s)	1588
SaqAI	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1434
SatI	GCNGC	6 cut(s)	38, 41, 71, 1060, 1178, 1476
Sau96I	GGNCC	2 cut(s)	218, 466
ScrFI	CCNGG	4 cut(s)	864, 1187, 1367, 1490
SduI	GDGCHC	1 cut(s)	1313
SfaNI	GCATC	1 cut(s)	1049
SfcI	CTRYAG	3 cut(s)	810, 1473, 1625
Sfr303I	CCGCGG	1 cut(s)	38
SfuI	TTCGAA	1 cut(s)	1484
SgrBI	CCGCGG	1 cut(s)	38
SinI	GGWCC	1 cut(s)	466
SmlI	CTYRAG	1 cut(s)	1678
SmoI	CTYRAG	1 cut(s)	1678
SpeI	ACTAGT	1 cut(s)	202
SseBI	AGGCCT	1 cut(s)	671
SsiI	CCGC	6 cut(s)	35, 37, 58, 442, 583, 1935
SspMI	CTAG	7 cut(s)	203, 312, 435, 471, 533, 1605, 1769
StuI	AGGCCT	1 cut(s)	671
StyD4I	CCNGG	4 cut(s)	862, 1185, 1365, 1488
StyI	CCWWGG	2 cut(s)	1023, 1858
TaaI	ACNGT	4 cut(s)	241, 460, 652, 784
TaqI	TCGA	7 cut(s)	316, 324, 1218, 1307, 1388, 1484, 1896
TatI	WGTACW	1 cut(s)	663
TauI	GCSGC	1 cut(s)	40
TfiI	GAWTC	6 cut(s)	29, 318, 1301, 1390, 1745, 1898
Tru1I	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1434
Tru9I	TTAA	8 cut(s)	389, 509, 590, 723, 761, 1116, 1161, 1434
TscAI	CASTG	6 cut(s)	52, 253, 739, 783, 789, 1758
TseFI	GTSAC	2 cut(s)	778, 946
TseI	GCWGC	5 cut(s)	40, 70, 1059, 1177, 1475
Tsp45I	GTSAC	2 cut(s)	778, 946
TspDTI	ATGAA	4 cut(s)	256, 375, 952, 1185
TspRI	CASTG	6 cut(s)	52, 253, 739, 783, 789, 1758
VpaK11BI	GGWCC	1 cut(s)	466
XapI	RAATTY	6 cut(s)	114, 639, 1224, 1494, 1518, 1615
XceI	RCATGY	1 cut(s)	1160
XmiI	GTMKAC	2 cut(s)	1031, 1838
XmnI	GAANNNNTTC	3 cut(s)	143, 1224, 1597
XspI	CTAG	7 cut(s)	203, 312, 435, 471, 533, 1605, 1769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.