Uridine-cytidine kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73980 AT1G73980 AT1G73980 |
| fragaria_vesca | FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 |
| malus_domestica | MD06G1207600.v1.1 MD06G1207800.v1.1 MD14G1218200.v1.1 |
| prunus_persica | Prupe.5G212000_v2.0.a1 Prupe.5G212000_v2.0.a1 |
| pyrus_communis | pycom06g18560 pycom06g18570 pycom14g18090 |
| rosa_chinensis | RchiOBHm_Chr7g0184091 |
| rosa_laevigata | RLG00000005001 |
| rosa_multiflora | Rmu_sc0004712.1_g000008 Rmu_sc0025350.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00269890 |
| rosa_rugosa | Rorug06G0462800 Rorug06G0462900 |
| rosa_samantha | Rh7AG082900 Rh7BG064100 Rh7CG064800 Rh7DG064300 |
| rosa_wichuraiana | Rw7G005270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1502 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1907 |
| Acc36I | ACCTGC | 1 cut(s) | 206 |
| AccI | GTMKAC | 1 cut(s) | 1031 |
| AccII | CGCG | 2 cut(s) | 43, 1371 |
| AciI | CCGC | 5 cut(s) | 41, 43, 523, 1369, 1371 |
| AclWI | GGATC | 7 cut(s) | 335, 611, 795, 866, 1155, 1657, 1711 |
| AcoI | YGGCCR | 1 cut(s) | 610 |
| AcsI | RAATTY | 4 cut(s) | 639, 1224, 1521, 1618 |
| AcuI | CTGAAG | 3 cut(s) | 897, 1656, 1942 |
| AfaI | GTAC | 3 cut(s) | 258, 665, 1210 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 47, 734 |
| AflII | CTTAAG | 2 cut(s) | 508, 1681 |
| AjnI | CCWGG | 3 cut(s) | 862, 1464, 1491 |
| Alw21I | GWGCWC | 1 cut(s) | 489 |
| Alw26I | GTCTC | 3 cut(s) | 1019, 1563, 1755 |
| AlwI | GGATC | 7 cut(s) | 335, 611, 795, 866, 1155, 1657, 1711 |
| Ama87I | CYCGRG | 1 cut(s) | 1332 |
| AoxI | GGCC | 6 cut(s) | 38, 524, 610, 669, 1020, 1257 |
| ApeKI | GCWGC | 2 cut(s) | 1059, 1177 |
| ApoI | RAATTY | 4 cut(s) | 639, 1224, 1521, 1618 |
| AseI | ATTAAT | 1 cut(s) | 1116 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1224, 1600, 1854 |
| AspLEI | GCGC | 1 cut(s) | 1002 |
| AspS9I | GGNCC | 4 cut(s) | 67, 218, 466, 1655 |
| AsuC2I | CCSGG | 1 cut(s) | 161 |
| AsuHPI | GGTGA | 4 cut(s) | 24, 703, 963, 1464 |
| AsuNHI | GCTAGC | 2 cut(s) | 1607, 1771 |
| AvaI | CYCGRG | 1 cut(s) | 1332 |
| AvaII | GGWCC | 4 cut(s) | 67, 218, 466, 1655 |
| BanII | GRGCYC | 1 cut(s) | 1465 |
| BauI | CACGAG | 1 cut(s) | 1560 |
| BbsI | GAAGAC | 1 cut(s) | 1283 |
| Bbv12I | GWGCWC | 1 cut(s) | 489 |
| BbvCI | CCTCAGC | 1 cut(s) | 1339 |
| BbvI | GCAGC | 2 cut(s) | 1071, 1189 |
| BccI | CCATC | 8 cut(s) | 185, 320, 642, 908, 1052, 1448, 1537, 1753 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 870, 904, 1100, 1134 |
| BciT130I | CCWGG | 3 cut(s) | 864, 1466, 1493 |
| BciVI | GTATCC | 1 cut(s) | 666 |
| BclI | TGATCA | 1 cut(s) | 814 |
| BcnI | CCSGG | 1 cut(s) | 161 |
| BcoDI | GTCTC | 3 cut(s) | 1019, 1563, 1755 |
| BfaI | CTAG | 5 cut(s) | 312, 435, 471, 1608, 1772 |
| BfmI | CTRYAG | 1 cut(s) | 621 |
| BfrI | CTTAAG | 2 cut(s) | 508, 1681 |
| BfuAI | ACCTGC | 1 cut(s) | 206 |
| BfuI | GTATCC | 1 cut(s) | 666 |
| BglII | AGATCT | 2 cut(s) | 535, 685 |
| BisI | GCNGC | 4 cut(s) | 41, 524, 1060, 1178 |
| BlpI | GCTNAGC | 1 cut(s) | 1286 |
| BlsI | GCNGC | 4 cut(s) | 42, 525, 1061, 1179 |
| BmcAI | AGTACT | 1 cut(s) | 258 |
| Bme1390I | CCNGG | 4 cut(s) | 161, 864, 1466, 1493 |
| Bme18I | GGWCC | 4 cut(s) | 67, 218, 466, 1655 |
| BmeT110I | CYCGRG | 1 cut(s) | 1332 |
| BmgT120I | GGNCC | 4 cut(s) | 67, 218, 466, 1655 |
| BmiI | GGNNCC | 4 cut(s) | 220, 468, 1657, 1787 |
| BmrFI | CCNGG | 4 cut(s) | 161, 864, 1466, 1493 |
| BmrI | ACTGGG | 1 cut(s) | 1907 |
| BmsI | GCATC | 5 cut(s) | 13, 298, 1049, 1385, 1758 |
| BmtI | GCTAGC | 2 cut(s) | 1611, 1775 |
| BmuI | ACTGGG | 1 cut(s) | 1907 |
| BpiI | GAAGAC | 1 cut(s) | 1283 |
| BpmI | CTGGAG | 3 cut(s) | 246, 674, 1253 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1339 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1286 |
| BpuEI | CTTGAG | 1 cut(s) | 1461 |
| BpuMI | CCSGG | 1 cut(s) | 161 |
| Bsa29I | ATCGAT | 1 cut(s) | 97 |
| BsaI | GGTCTC | 1 cut(s) | 1019 |
| BsaJI | CCNNGG | 7 cut(s) | 35, 41, 1023, 1369, 1464, 1492, 1861 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 47, 734 |
| Bse118I | RCCGGY | 1 cut(s) | 608 |
| Bse1I | ACTGG | 7 cut(s) | 207, 416, 559, 739, 1651, 1681, 1913 |
| Bse3DI | GCAATG | 1 cut(s) | 276 |
| BseBI | CCWGG | 3 cut(s) | 864, 1466, 1493 |
| BseCI | ATCGAT | 1 cut(s) | 97 |
| BseDI | CCNNGG | 7 cut(s) | 35, 41, 1023, 1369, 1464, 1492, 1861 |
| BseGI | GGATG | 5 cut(s) | 906, 919, 1040, 1548, 1552 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 47, 734 |
| BseMI | GCAATG | 1 cut(s) | 276 |
| BseMII | CTCAG | 3 cut(s) | 1300, 1353, 1602 |
| BseNI | ACTGG | 7 cut(s) | 207, 416, 559, 739, 1651, 1681, 1913 |
| BseXI | GCAGC | 2 cut(s) | 1071, 1189 |
| BseYI | CCCAGC | 1 cut(s) | 272 |
| BsgI | GTGCAG | 1 cut(s) | 1627 |
| Bsh1236I | CGCG | 2 cut(s) | 43, 1371 |
| BshFI | GGCC | 6 cut(s) | 40, 526, 612, 671, 1022, 1259 |
| BshVI | ATCGAT | 1 cut(s) | 97 |
| BsiHKAI | GWGCWC | 1 cut(s) | 489 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1332 |
| BsiSI | CCGG | 2 cut(s) | 160, 609 |
| BslFI | GGGAC | 7 cut(s) | 95, 204, 452, 608, 942, 1415, 1895 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 47, 734 |
| BsmAI | GTCTC | 3 cut(s) | 1019, 1563, 1755 |
| BsmBI | CGTCTC | 1 cut(s) | 1563 |
| BsmFI | GGGAC | 7 cut(s) | 95, 204, 452, 608, 942, 1415, 1895 |
| BsnI | GGCC | 6 cut(s) | 40, 526, 612, 671, 1022, 1259 |
| Bso31I | GGTCTC | 1 cut(s) | 1019 |
| BsoBI | CYCGRG | 1 cut(s) | 1332 |
| Bsp1286I | GDGCHC | 2 cut(s) | 489, 1465 |
| Bsp1407I | TGTACA | 1 cut(s) | 663 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1286 |
| BspACI | CCGC | 5 cut(s) | 41, 43, 523, 1369, 1371 |
| BspANI | GGCC | 6 cut(s) | 40, 526, 612, 671, 1022, 1259 |
| BspCNI | CTCAG | 3 cut(s) | 1299, 1352, 1601 |
| BspDI | ATCGAT | 1 cut(s) | 97 |
| BspFNI | CGCG | 2 cut(s) | 43, 1371 |
| BspLI | GGNNCC | 4 cut(s) | 220, 468, 1657, 1787 |
| BspMAI | CTGCAG | 1 cut(s) | 625 |
| BspMI | ACCTGC | 1 cut(s) | 206 |
| BspOI | GCTAGC | 2 cut(s) | 1611, 1775 |
| BspPI | GGATC | 7 cut(s) | 335, 611, 795, 866, 1155, 1657, 1711 |
| BspQI | GCTCTTC | 2 cut(s) | 1453, 1861 |
| BspTI | CTTAAG | 2 cut(s) | 508, 1681 |
| BspTNI | GGTCTC | 1 cut(s) | 1019 |
| BsrDI | GCAATG | 1 cut(s) | 276 |
| BsrFI | RCCGGY | 1 cut(s) | 608 |
| BsrGI | TGTACA | 1 cut(s) | 663 |
| BsrI | ACTGG | 7 cut(s) | 207, 416, 559, 739, 1651, 1681, 1913 |
| BssAI | RCCGGY | 1 cut(s) | 608 |
| BssECI | CCNNGG | 7 cut(s) | 35, 41, 1023, 1369, 1464, 1492, 1861 |
| BssNAI | GTATAC | 1 cut(s) | 1032 |
| BssSI | CACGAG | 1 cut(s) | 1560 |
| BssT1I | CCWWGG | 2 cut(s) | 1023, 1861 |
| Bst1107I | GTATAC | 1 cut(s) | 1032 |
| Bst2BI | CACGAG | 1 cut(s) | 1560 |
| Bst2UI | CCWGG | 3 cut(s) | 864, 1466, 1493 |
| Bst4CI | ACNGT | 8 cut(s) | 92, 129, 241, 460, 652, 784, 1193, 1442 |
| Bst6I | CTCTTC | 4 cut(s) | 1453, 1758, 1861, 1879 |
| BstAFI | CTTAAG | 2 cut(s) | 508, 1681 |
| BstAUI | TGTACA | 1 cut(s) | 663 |
| BstC8I | GCNNGC | 7 cut(s) | 397, 610, 1609, 1613, 1632, 1642, 1773 |
| BstDEI | CTNAG | 4 cut(s) | 896, 1286, 1339, 1588 |
| BstDSI | CCRYGG | 2 cut(s) | 41, 1369 |
| BstF5I | GGATG | 5 cut(s) | 906, 919, 1040, 1548, 1552 |
| BstFNI | CGCG | 2 cut(s) | 43, 1371 |
| BstHHI | GCGC | 1 cut(s) | 1002 |
| BstMAI | GTCTC | 3 cut(s) | 1019, 1563, 1755 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1631 |
| BstNI | CCWGG | 3 cut(s) | 864, 1466, 1493 |
| BstNSI | RCATGY | 2 cut(s) | 168, 885 |
| BstSCI | CCNGG | 4 cut(s) | 159, 862, 1464, 1491 |
| BstSFI | CTRYAG | 1 cut(s) | 621 |
| BstUI | CGCG | 2 cut(s) | 43, 1371 |
| BstV1I | GCAGC | 2 cut(s) | 1071, 1189 |
| BstV2I | GAAGAC | 1 cut(s) | 1283 |
| BstX2I | RGATCY | 6 cut(s) | 535, 616, 685, 871, 1649, 1703 |
| BstYI | RGATCY | 6 cut(s) | 535, 616, 685, 871, 1649, 1703 |
| BstZ17I | GTATAC | 1 cut(s) | 1032 |
| Bsu15I | ATCGAT | 1 cut(s) | 97 |
| BsuI | GTATCC | 1 cut(s) | 666 |
| BsuRI | GGCC | 6 cut(s) | 40, 526, 612, 671, 1022, 1259 |
| BsuTUI | ATCGAT | 1 cut(s) | 97 |
| BtgI | CCRYGG | 2 cut(s) | 41, 1369 |
| BtsCI | GGATG | 5 cut(s) | 906, 919, 1040, 1548, 1552 |
| BtsI | GCAGTG | 1 cut(s) | 783 |
| BtsIMutI | CAGTG | 6 cut(s) | 732, 783, 789, 1529, 1644, 1754 |
| BveI | ACCTGC | 1 cut(s) | 206 |
| Cac8I | GCNNGC | 7 cut(s) | 397, 610, 1609, 1613, 1632, 1642, 1773 |
| CfoI | GCGC | 1 cut(s) | 1002 |
| Cfr10I | RCCGGY | 1 cut(s) | 608 |
| Cfr13I | GGNCC | 4 cut(s) | 67, 218, 466, 1655 |
| Cfr42I | CCGCGG | 2 cut(s) | 44, 1372 |
| ClaI | ATCGAT | 1 cut(s) | 97 |
| Csp6I | GTAC | 3 cut(s) | 257, 664, 1209 |
| CviAII | CATG | 7 cut(s) | 165, 383, 882, 931, 1018, 1255, 1801 |
| CviQI | GTAC | 3 cut(s) | 257, 664, 1209 |
| DdeI | CTNAG | 4 cut(s) | 896, 1286, 1339, 1588 |
| DraI | TTTAAA | 2 cut(s) | 390, 762 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1907 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1907 |
| EaeI | YGGCCR | 1 cut(s) | 610 |
| Eam1104I | CTCTTC | 4 cut(s) | 1453, 1758, 1861, 1879 |
| EarI | CTCTTC | 4 cut(s) | 1453, 1758, 1861, 1879 |
| Eco130I | CCWWGG | 2 cut(s) | 1023, 1861 |
| Eco147I | AGGCCT | 1 cut(s) | 671 |
| Eco24I | GRGCYC | 1 cut(s) | 1465 |
| Eco31I | GGTCTC | 1 cut(s) | 1019 |
| Eco47I | GGWCC | 4 cut(s) | 67, 218, 466, 1655 |
| Eco57I | CTGAAG | 3 cut(s) | 897, 1656, 1942 |
| Eco88I | CYCGRG | 1 cut(s) | 1332 |
| EcoO109I | RGGNCCY | 2 cut(s) | 218, 466 |
| EcoRII | CCWGG | 3 cut(s) | 862, 1464, 1491 |
| EcoT14I | CCWWGG | 2 cut(s) | 1023, 1861 |
| EcoT38I | GRGCYC | 1 cut(s) | 1465 |
| ErhI | CCWWGG | 2 cut(s) | 1023, 1861 |
| Esp3I | CGTCTC | 1 cut(s) | 1563 |
| FaeI | CATG | 7 cut(s) | 168, 386, 885, 934, 1021, 1258, 1804 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 789, 821 |
| FaqI | GGGAC | 7 cut(s) | 95, 204, 452, 608, 942, 1415, 1895 |
| FatI | CATG | 7 cut(s) | 164, 382, 881, 930, 1017, 1254, 1800 |
| FauNDI | CATATG | 1 cut(s) | 1198 |
| FbaI | TGATCA | 1 cut(s) | 814 |
| FblI | GTMKAC | 1 cut(s) | 1031 |
| Fnu4HI | GCNGC | 4 cut(s) | 41, 524, 1060, 1178 |
| FokI | GGATG | 5 cut(s) | 913, 926, 1027, 1555, 1559 |
| FriOI | GRGCYC | 1 cut(s) | 1465 |
| Fsp4HI | GCNGC | 4 cut(s) | 41, 524, 1060, 1178 |
| FspBI | CTAG | 5 cut(s) | 312, 435, 471, 1608, 1772 |
| GlaI | GCGC | 1 cut(s) | 1001 |
| GluI | GCNGC | 4 cut(s) | 41, 524, 1060, 1178 |
| GsaI | CCCAGC | 1 cut(s) | 276 |
| GsuI | CTGGAG | 3 cut(s) | 246, 674, 1253 |
| HaeIII | GGCC | 6 cut(s) | 40, 526, 612, 671, 1022, 1259 |
| HapII | CCGG | 2 cut(s) | 160, 609 |
| HhaI | GCGC | 1 cut(s) | 1002 |
| Hin1II | CATG | 7 cut(s) | 168, 386, 885, 934, 1021, 1258, 1804 |
| Hin6I | GCGC | 1 cut(s) | 1000 |
| HinP1I | GCGC | 1 cut(s) | 1000 |
| HincII | GTYRAC | 1 cut(s) | 1438 |
| HindII | GTYRAC | 1 cut(s) | 1438 |
| HinfI | GANTC | 5 cut(s) | 29, 1469, 1748, 1901, 1963 |
| HpaI | GTTAAC | 1 cut(s) | 1438 |
| HpaII | CCGG | 2 cut(s) | 160, 609 |
| HphI | GGTGA | 4 cut(s) | 24, 703, 963, 1464 |
| Hpy166II | GTNNAC | 4 cut(s) | 565, 1032, 1438, 1554 |
| Hpy188I | TCNGA | 7 cut(s) | 22, 646, 792, 811, 1516, 1595, 1968 |
| Hpy8I | GTNNAC | 4 cut(s) | 565, 1032, 1438, 1554 |
| Hpy99I | CGWCG | 1 cut(s) | 341 |
| HpyAV | CCTTC | 4 cut(s) | 739, 970, 1013, 1440 |
| HpyCH4III | ACNGT | 8 cut(s) | 92, 129, 241, 460, 652, 784, 1193, 1442 |
| HpyCH4IV | ACGT | 2 cut(s) | 604, 1556 |
| HpyCH4V | TGCA | 7 cut(s) | 623, 1040, 1138, 1376, 1630, 1644, 1804 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1631 |
| HpyF3I | CTNAG | 4 cut(s) | 896, 1286, 1339, 1588 |
| HpySE526I | ACGT | 2 cut(s) | 604, 1556 |
| Hsp92II | CATG | 7 cut(s) | 168, 386, 885, 934, 1021, 1258, 1804 |
| HspAI | GCGC | 1 cut(s) | 1000 |
| KroI | GCCGGC | 1 cut(s) | 608 |
| KroNI | GCCGGC | 1 cut(s) | 610 |
| Ksp22I | TGATCA | 1 cut(s) | 814 |
| KspAI | GTTAAC | 1 cut(s) | 1438 |
| KspI | CCGCGG | 2 cut(s) | 44, 1372 |
| LguI | GCTCTTC | 2 cut(s) | 1453, 1861 |
| LmnI | GCTCC | 4 cut(s) | 227, 479, 1108, 1785 |
| Lsp1109I | GCAGC | 2 cut(s) | 1071, 1189 |
| LweI | GCATC | 5 cut(s) | 13, 298, 1049, 1385, 1758 |
| MaeI | CTAG | 5 cut(s) | 312, 435, 471, 1608, 1772 |
| MaeII | ACGT | 2 cut(s) | 604, 1556 |
| MaeIII | GTNAC | 6 cut(s) | 449, 588, 778, 946, 1672, 1888 |
| MfeI | CAATTG | 4 cut(s) | 1035, 1736, 1905, 1932 |
| MflI | RGATCY | 6 cut(s) | 535, 616, 685, 871, 1649, 1703 |
| MhlI | GDGCHC | 2 cut(s) | 489, 1465 |
| MlyI | GAGTC | 3 cut(s) | 1757, 1895, 1972 |
| MmeI | TCCRAC | 3 cut(s) | 94, 187, 1086 |
| MroNI | GCCGGC | 1 cut(s) | 608 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1224, 1600, 1854 |
| MseI | TTAA | 9 cut(s) | 78, 389, 509, 761, 771, 1116, 1161, 1437, 1682 |
| MspA1I | CMGCKG | 4 cut(s) | 43, 172, 1231, 1371 |
| MspCI | CTTAAG | 2 cut(s) | 508, 1681 |
| MspI | CCGG | 2 cut(s) | 160, 609 |
| MspR9I | CCNGG | 4 cut(s) | 161, 864, 1466, 1493 |
| MunI | CAATTG | 4 cut(s) | 1035, 1736, 1905, 1932 |
| MvaI | CCWGG | 3 cut(s) | 864, 1466, 1493 |
| MvnI | CGCG | 2 cut(s) | 43, 1371 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1631 |
| NaeI | GCCGGC | 1 cut(s) | 610 |
| NciI | CCSGG | 1 cut(s) | 161 |
| NdeI | CATATG | 1 cut(s) | 1198 |
| NgoMIV | GCCGGC | 1 cut(s) | 608 |
| NheI | GCTAGC | 2 cut(s) | 1607, 1771 |
| NlaIII | CATG | 7 cut(s) | 168, 386, 885, 934, 1021, 1258, 1804 |
| NlaIV | GGNNCC | 4 cut(s) | 220, 468, 1657, 1787 |
| NmuCI | GTSAC | 2 cut(s) | 778, 1888 |
| NspI | RCATGY | 2 cut(s) | 168, 885 |
| PaeR7I | CTCGAG | 1 cut(s) | 1332 |
| PceI | AGGCCT | 1 cut(s) | 671 |
| PciSI | GCTCTTC | 2 cut(s) | 1453, 1861 |
| PdiI | GCCGGC | 1 cut(s) | 610 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1224, 1600, 1854 |
| PfeI | GAWTC | 2 cut(s) | 29, 1469 |
| PflFI | GACNNNGTC | 2 cut(s) | 575, 1411 |
| PkrI | GCNGC | 4 cut(s) | 42, 525, 1061, 1179 |
| PleI | GAGTC | 3 cut(s) | 1756, 1895, 1971 |
| PpsI | GAGTC | 3 cut(s) | 1756, 1895, 1971 |
| PpuMI | RGGWCCY | 2 cut(s) | 218, 466 |
| PshBI | ATTAAT | 1 cut(s) | 1116 |
| PsiI | TTATAA | 1 cut(s) | 1502 |
| Psp5II | RGGWCCY | 2 cut(s) | 218, 466 |
| Psp6I | CCWGG | 3 cut(s) | 862, 1464, 1491 |
| PspFI | CCCAGC | 1 cut(s) | 272 |
| PspGI | CCWGG | 3 cut(s) | 862, 1464, 1491 |
| PspN4I | GGNNCC | 4 cut(s) | 220, 468, 1657, 1787 |
| PspPI | GGNCC | 4 cut(s) | 67, 218, 466, 1655 |
| PspPPI | RGGWCCY | 2 cut(s) | 218, 466 |
| PstI | CTGCAG | 1 cut(s) | 625 |
| PsuI | RGATCY | 6 cut(s) | 535, 616, 685, 871, 1649, 1703 |
| PsyI | GACNNNGTC | 2 cut(s) | 575, 1411 |
| PvuII | CAGCTG | 2 cut(s) | 172, 1231 |
| RsaI | GTAC | 3 cut(s) | 258, 665, 1210 |
| RsaNI | GTAC | 3 cut(s) | 257, 664, 1209 |
| SacII | CCGCGG | 2 cut(s) | 44, 1372 |
| SapI | GCTCTTC | 2 cut(s) | 1453, 1861 |
| SaqAI | TTAA | 9 cut(s) | 78, 389, 509, 761, 771, 1116, 1161, 1437, 1682 |
| SatI | GCNGC | 4 cut(s) | 41, 524, 1060, 1178 |
| Sau96I | GGNCC | 4 cut(s) | 67, 218, 466, 1655 |
| ScaI | AGTACT | 1 cut(s) | 258 |
| SchI | GAGTC | 3 cut(s) | 1757, 1895, 1972 |
| ScrFI | CCNGG | 4 cut(s) | 161, 864, 1466, 1493 |
| SduI | GDGCHC | 2 cut(s) | 489, 1465 |
| SfaNI | GCATC | 5 cut(s) | 13, 298, 1049, 1385, 1758 |
| SfcI | CTRYAG | 1 cut(s) | 621 |
| Sfr274I | CTCGAG | 1 cut(s) | 1332 |
| Sfr303I | CCGCGG | 2 cut(s) | 44, 1372 |
| SgrBI | CCGCGG | 2 cut(s) | 44, 1372 |
| SinI | GGWCC | 4 cut(s) | 67, 218, 466, 1655 |
| SlaI | CTCGAG | 1 cut(s) | 1332 |
| SmlI | CTYRAG | 5 cut(s) | 6, 508, 1332, 1476, 1681 |
| SmoI | CTYRAG | 5 cut(s) | 6, 508, 1332, 1476, 1681 |
| SseBI | AGGCCT | 1 cut(s) | 671 |
| SsiI | CCGC | 5 cut(s) | 41, 43, 523, 1369, 1371 |
| SspI | AATATT | 1 cut(s) | 1841 |
| SspMI | CTAG | 5 cut(s) | 312, 435, 471, 1608, 1772 |
| StuI | AGGCCT | 1 cut(s) | 671 |
| StyD4I | CCNGG | 4 cut(s) | 159, 862, 1464, 1491 |
| StyI | CCWWGG | 2 cut(s) | 1023, 1861 |
| TaaI | ACNGT | 8 cut(s) | 92, 129, 241, 460, 652, 784, 1193, 1442 |
| TaiI | ACGT | 2 cut(s) | 607, 1559 |
| TaqI | TCGA | 5 cut(s) | 97, 336, 976, 1182, 1333 |
| TatI | WGTACW | 2 cut(s) | 256, 663 |
| TauI | GCSGC | 2 cut(s) | 43, 526 |
| TfiI | GAWTC | 2 cut(s) | 29, 1469 |
| Tru1I | TTAA | 9 cut(s) | 78, 389, 509, 761, 771, 1116, 1161, 1437, 1682 |
| Tru9I | TTAA | 9 cut(s) | 78, 389, 509, 761, 771, 1116, 1161, 1437, 1682 |
| TscAI | CASTG | 6 cut(s) | 739, 783, 789, 1536, 1651, 1761 |
| TseFI | GTSAC | 2 cut(s) | 778, 1888 |
| TseI | GCWGC | 2 cut(s) | 1059, 1177 |
| Tsp45I | GTSAC | 2 cut(s) | 778, 1888 |
| TspDTI | ATGAA | 2 cut(s) | 952, 1185 |
| TspGWI | ACGGA | 4 cut(s) | 263, 530, 965, 1798 |
| TspRI | CASTG | 6 cut(s) | 739, 783, 789, 1536, 1651, 1761 |
| Tth111I | GACNNNGTC | 2 cut(s) | 575, 1411 |
| Vha464I | CTTAAG | 2 cut(s) | 508, 1681 |
| VpaK11BI | GGWCC | 4 cut(s) | 67, 218, 466, 1655 |
| VspI | ATTAAT | 1 cut(s) | 1116 |
| XapI | RAATTY | 4 cut(s) | 639, 1224, 1521, 1618 |
| XceI | RCATGY | 2 cut(s) | 168, 885 |
| XhoI | CTCGAG | 1 cut(s) | 1332 |
| XmiI | GTMKAC | 1 cut(s) | 1031 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1224, 1600, 1854 |
| XspI | CTAG | 5 cut(s) | 312, 435, 471, 1608, 1772 |
| ZrmI | AGTACT | 1 cut(s) | 258 |