Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003308

Physical Location & Seq

Genomic Coordinates Forward (+)

4252197 .. 4258012

Gene Structure 5816 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG064100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGCTAAAGATACAAATGATGCTGAGTCGCCTAGGCCACGTTCTGGTCTATTGCGAGATCAGGTCCAACTAGTTAAAAGGAAGGACTGTGACCGATATGAAATTGCCCCCATTCCAGATATACTTTCGTTTGAGAAAGGTTTCTTTATAGTGATACGGGCATGCCAGTTGTTGGCTCAAAAGAATGATGGGATAGTACTCGTTGGAGTAGCAGGCCCATCTGGAGCAGGCAAGACTGTTTTCACGGAGAAGGTGCTGAACTTTATGCCCAGCATTGCTGTCATTACATTGGATAACTACAATGATGCAAGTCGTATCGTTGACGGCAACTTCGATGATCCACGCCTGACAGATTATGAGACATTGCTTGAAAACATACATGGCTTAAAAGCGGGGAAGGCTGTTGAGGTTCCAATATATGATTTCAAATCTAGCTCTCGCATAGGCTACAGGACAGTGGAGGTCCCTAGCTCTCGAATTGTAATAATTGAGGGCATATATGCCTTAAATGAGAAATTGCGGCCTTTGCTGGATCTTCGCGTGTCTATAACTGGTGGAGTTCACTTTGACCTTGTCAAGCGGGTTTTACGAGACATCCAACGTGCAGGCCAAGAGCCTGAAGAAATTATTCATCAAATCTCTGAAACGGTGTATCCTATGTACAAGGCCTTTATTGAGCCAGATCTCCAGACAGCACATATTAAAATTACCAATAAATTTAATCCCTTCACTGGTTTTCAGAATCCGACTTATATATTAAAGTCAAATAGGGCAGTGACAGTGGATCAAATCAAGGCTGTTGTTTTTGAAGAGCACAAAGAAACCAGAGAAGAAACTTATGACATATATCTTTTACCACCAGGTGAAGATCCTGAAGCATGTCAATCGTATCTAAGGATGAGGAACAGGGATGGCAAATACAATCTCATGTTTGAGGAGTGGGTTTCGGATAGTCCCTTCATAATATCACCAAGAATAACTTTTGTAGTTAGTGTGCGCCTTCTTGGAGGTCTCATGGCTCTGGGGTATACAATTGCAGCCATCCTAAAAAGAAGCAGTCATATTTTCAGTGATGATAGGGTCTGCGTGAAAACTGATTGGCTGGAGCAGCTTAATCGCCAATATGTTCAGGTACAAGGAAAGGATCGTCTATATGTTAAATATATCGCGGAGCAGCTGGGCCTGGAAGGTTCATATGTTCCCCGTACTTACATTGAACAAATTCAGCTGGAGAAACTTGTAAATGATGTTATGGCCTTACCAGATGATTTGAAGACAAAGCTCAGCATAGATGATGATTTTGTTTCAAGCCCTAAAGAAGCCCTTTCCCGAGCCTCAGCAGATAGGAGAAGCAAGTATCTCAACCGCGATATGTCACGCTCTTTCTCAAATCACAGGGACAAGACTCTTTCCAAGTTAACAAGGCTTTCTGTTAACAATAGAATGTTTGATGGGAGAGCCCTGGAATCACCTGCTACAATTTCAAACCAGGGAGTTTTCACCCAGCTTTCGGAACAGATATCTACGCTGAATGAGAGGATGGATGAGTTTACGTCTCGTGTAGAAGAGCTCAACTCCAAGGTCTTGGTCAGAAAAACTTCAGCTAGCCAGCAGAACTTGGCTTTGCAGGCTGAAGCGTGCAATGGACCTGCACCTGCTTCTCTTTTTGTTACTGGATTAAGCAACGGTGCGTTGACAGGATCCCTACTGCCAAGTTCTGCATCTTCTTCACAATTAGCCAAGGAATCTCCGTTGATGGAAGAGATACAAGCAATCACACGAAGCCAACGCCAGATCATGCACCAAATAGACAATTTGAGCAACCTTCTACGGGAGTACTCAGCAGAGAGACTTCGCCTAGGAAGAGCAGATAGTACTGGCCGAGTGAATGATATCGACTCCATTGGTCCAATTATACTTGCTTTGGCAATTGGTGGTGCAGGTGTCTTGTTCTTCAGGAGTTTGACCTCCCAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

CYTH PRK

Protein Analysis

659

Amino Acids

73.96

Weight (kDa)

6.52

Isoelectric Point (pI)

47.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	68 - 236	1.5e-23	Phosphoribulokinase / Uridine kinase family
CYTH	PF01928	266 - 404	6e-20	CYTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73980 AT1G73980 AT1G73980
fragaria_vesca	FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040
malus_domestica	MD06G1207600.v1.1 MD06G1207800.v1.1 MD14G1218200.v1.1
prunus_persica	Prupe.5G212000_v2.0.a1 Prupe.5G212000_v2.0.a1
pyrus_communis	pycom06g18560 pycom06g18570 pycom14g18090
rosa_chinensis	RchiOBHm_Chr7g0184091
rosa_laevigata	RLG00000005001
rosa_multiflora	Rmu_sc0004712.1_g000008 Rmu_sc0025350.1_g000011
rosa_roxburghii	Rroxscaffold_3G00269890
rosa_rugosa	Rorug06G0462800 Rorug06G0462900
rosa_samantha	Rh7AG082900 Rh7BG064100 Rh7CG064800 Rh7DG064300
rosa_wichuraiana	Rw7G005270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	1480, 1663, 1931
Acc36I	ACCTGC	4 cut(s)	1480, 1657, 1663, 1931
AccB7I	CCANNNNNTGG	2 cut(s)	44, 172
AccI	GTMKAC	1 cut(s)	1028
AccII	CGCG	3 cut(s)	540, 1169, 1368
AciI	CCGC	5 cut(s)	392, 520, 580, 1169, 1366
AclWI	GGATC	7 cut(s)	332, 540, 792, 863, 1152, 1695, 1708
AcoI	YGGCCR	1 cut(s)	1879
AcsI	RAATTY	2 cut(s)	716, 1221
AcuI	CTGAAG	5 cut(s)	639, 894, 1584, 1653, 1939
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	6 cut(s)	198, 662, 1134, 1207, 1838, 1876
AfiI	CCNNNNNNNGG	5 cut(s)	44, 172, 731, 1510, 1831
AgsI	TTSAA	7 cut(s)	371, 427, 809, 1217, 1273, 1308, 1485
AhlI	ACTAGT	1 cut(s)	70
AjnI	CCWGG	4 cut(s)	859, 1182, 1461, 1488
AluBI	AGCT	9 cut(s)	435, 471, 1111, 1177, 1228, 1282, 1507, 1570, 1604
AluI	AGCT	9 cut(s)	435, 471, 1111, 1177, 1228, 1282, 1507, 1570, 1604
Alw21I	GWGCWC	2 cut(s)	816, 1572
Alw26I	GTCTC	5 cut(s)	353, 585, 1016, 1560, 1843
AlwI	GGATC	7 cut(s)	332, 540, 792, 863, 1152, 1695, 1708
Ama87I	CYCGRG	1 cut(s)	1329
AoxI	GGCC	8 cut(s)	35, 214, 521, 607, 666, 1180, 1254, 1879
ApeKI	GCWGC	3 cut(s)	1037, 1108, 1174
ApoI	RAATTY	2 cut(s)	716, 1221
ArsI	GACNNNNNNTTYG	2 cut(s)	314, 346
Asp700I	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1597
AspA2I	CCTAGG	2 cut(s)	32, 1858
AspLEI	GCGC	1 cut(s)	999
AspS9I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1646, 1907
AsuHPI	GGTGA	4 cut(s)	875, 960, 1461, 1492
AsuNHI	GCTAGC	1 cut(s)	1604
AvaI	CYCGRG	1 cut(s)	1329
AvaII	GGWCC	4 cut(s)	64, 463, 1646, 1907
AvrII	CCTAGG	2 cut(s)	32, 1858
BamHI	GGATCC	1 cut(s)	1700
BanII	GRGCYC	2 cut(s)	1462, 1572
BauI	CACGAG	1 cut(s)	1557
BbsI	GAAGAC	1 cut(s)	1280
Bbv12I	GWGCWC	2 cut(s)	816, 1572
BbvCI	CCTCAGC	1 cut(s)	1336
BbvI	GCAGC	3 cut(s)	1049, 1120, 1186
BccI	CCATC	7 cut(s)	182, 226, 905, 1049, 1445, 1534, 1750
BceAI	ACGGC	1 cut(s)	340
BcgI	CGANNNNNNTGC	4 cut(s)	867, 901, 1097, 1131
BciT130I	CCWGG	4 cut(s)	861, 1184, 1463, 1490
BciVI	GTATCC	1 cut(s)	663
BcoDI	GTCTC	5 cut(s)	353, 585, 1016, 1560, 1843
BcuI	ACTAGT	1 cut(s)	70
BfaI	CTAG	6 cut(s)	33, 71, 432, 468, 1605, 1859
BfmI	CTRYAG	1 cut(s)	448
BfuAI	ACCTGC	4 cut(s)	1480, 1657, 1663, 1931
BfuI	GTATCC	1 cut(s)	663
BglII	AGATCT	1 cut(s)	682
BisI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
BlnI	CCTAGG	2 cut(s)	32, 1858
BlpI	GCTNAGC	1 cut(s)	1283
BlsI	GCNGC	4 cut(s)	522, 1039, 1110, 1176
BmcAI	AGTACT	3 cut(s)	198, 1838, 1876
Bme1390I	CCNGG	4 cut(s)	861, 1184, 1463, 1490
Bme18I	GGWCC	4 cut(s)	64, 463, 1646, 1907
BmeT110I	CYCGRG	1 cut(s)	1329
BmgT120I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1646, 1907
BmiI	GGNNCC	3 cut(s)	411, 465, 1702
BmrFI	CCNGG	4 cut(s)	861, 1184, 1463, 1490
BmsI	GCATC	3 cut(s)	10, 295, 1730
BmtI	GCTAGC	1 cut(s)	1608
BpiI	GAAGAC	1 cut(s)	1280
BplI	GAGNNNNNCTC	2 cut(s)	1559, 1591
BpmI	CTGGAG	4 cut(s)	243, 671, 1124, 1250
Bpu10I	CCTNAGC	1 cut(s)	1336
Bpu1102I	GCTNAGC	1 cut(s)	1283
BsaI	GGTCTC	1 cut(s)	1016
BsaJI	CCNNGG	6 cut(s)	32, 1461, 1489, 1578, 1740, 1858
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 172, 731, 1510, 1831
Bse1I	ACTGG	5 cut(s)	166, 556, 736, 1678, 1882
Bse3DI	GCAATG	3 cut(s)	273, 362, 1648
BseBI	CCWGG	4 cut(s)	861, 1184, 1463, 1490
BseDI	CCNNGG	6 cut(s)	32, 1461, 1489, 1578, 1740, 1858
BseGI	GGATG	6 cut(s)	594, 903, 916, 1041, 1545, 1549
BseLI	CCNNNNNNNGG	5 cut(s)	44, 172, 731, 1510, 1831
BseMI	GCAATG	3 cut(s)	273, 362, 1648
BseMII	CTCAG	4 cut(s)	15, 1297, 1350, 1854
BseNI	ACTGG	5 cut(s)	166, 556, 736, 1678, 1882
BseRI	GAGGAG	1 cut(s)	950
BseXI	GCAGC	3 cut(s)	1049, 1120, 1186
BseYI	CCCAGC	3 cut(s)	269, 1177, 1503
BsgI	GTGCAG	3 cut(s)	624, 1635, 1959
Bsh1236I	CGCG	3 cut(s)	540, 1169, 1368
BshFI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1881
BsiHKAI	GWGCWC	2 cut(s)	816, 1572
BsiHKCI	CYCGRG	1 cut(s)	1329
BslFI	GGGAC	3 cut(s)	449, 939, 1412
BslI	CCNNNNNNNGG	5 cut(s)	44, 172, 731, 1510, 1831
BsmAI	GTCTC	5 cut(s)	353, 585, 1016, 1560, 1843
BsmBI	CGTCTC	1 cut(s)	1560
BsmFI	GGGAC	3 cut(s)	449, 939, 1412
BsnI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1881
Bso31I	GGTCTC	1 cut(s)	1016
BsoBI	CYCGRG	1 cut(s)	1329
Bsp1286I	GDGCHC	3 cut(s)	816, 1462, 1572
Bsp1407I	TGTACA	1 cut(s)	660
Bsp143I	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
Bsp1720I	GCTNAGC	1 cut(s)	1283
BspACI	CCGC	5 cut(s)	392, 520, 580, 1169, 1366
BspANI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1881
BspCNI	CTCAG	4 cut(s)	16, 1296, 1349, 1853
BspFNI	CGCG	3 cut(s)	540, 1169, 1368
BspLI	GGNNCC	3 cut(s)	411, 465, 1702
BspMI	ACCTGC	4 cut(s)	1480, 1657, 1663, 1931
BspOI	GCTAGC	1 cut(s)	1608
BspPI	GGATC	7 cut(s)	332, 540, 792, 863, 1152, 1695, 1708
BspQI	GCTCTTC	3 cut(s)	804, 1560, 1858
BspTNI	GGTCTC	1 cut(s)	1016
BsrDI	GCAATG	3 cut(s)	273, 362, 1648
BsrGI	TGTACA	1 cut(s)	660
BsrI	ACTGG	5 cut(s)	166, 556, 736, 1678, 1882
BssECI	CCNNGG	6 cut(s)	32, 1461, 1489, 1578, 1740, 1858
BssMI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
BssNAI	GTATAC	1 cut(s)	1029
BssSI	CACGAG	1 cut(s)	1557
BssT1I	CCWWGG	4 cut(s)	32, 1578, 1740, 1858
Bst1107I	GTATAC	1 cut(s)	1029
Bst2BI	CACGAG	1 cut(s)	1557
Bst2UI	CCWGG	4 cut(s)	861, 1184, 1463, 1490
Bst4CI	ACNGT	6 cut(s)	89, 238, 457, 649, 781, 1688
Bst6I	CTCTTC	4 cut(s)	804, 1560, 1755, 1858
BstAUI	TGTACA	1 cut(s)	660
BstC8I	GCNNGC	8 cut(s)	163, 214, 229, 607, 1606, 1610, 1629, 1639
BstDEI	CTNAG	5 cut(s)	24, 893, 1283, 1336, 1840
BstF5I	GGATG	6 cut(s)	594, 903, 916, 1041, 1545, 1549
BstFNI	CGCG	3 cut(s)	540, 1169, 1368
BstHHI	GCGC	1 cut(s)	999
BstKTI	GATC	9 cut(s)	61, 340, 535, 685, 787, 871, 1147, 1703, 1797
BstMAI	GTCTC	5 cut(s)	353, 585, 1016, 1560, 1843
BstMBI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
BstMWI	GCNNNNNNNGC	4 cut(s)	398, 526, 1108, 1628
BstNI	CCWGG	4 cut(s)	861, 1184, 1463, 1490
BstNSI	RCATGY	2 cut(s)	165, 882
BstSCI	CCNGG	4 cut(s)	859, 1182, 1461, 1488
BstSFI	CTRYAG	1 cut(s)	448
BstUI	CGCG	3 cut(s)	540, 1169, 1368
BstV1I	GCAGC	3 cut(s)	1049, 1120, 1186
BstV2I	GAAGAC	1 cut(s)	1280
BstX2I	RGATCY	4 cut(s)	532, 682, 868, 1700
BstXI	CCANNNNNNTGG	1 cut(s)	1585
BstYI	RGATCY	4 cut(s)	532, 682, 868, 1700
BstZ17I	GTATAC	1 cut(s)	1029
BsuI	GTATCC	1 cut(s)	663
BsuRI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1881
BtsCI	GGATG	6 cut(s)	594, 903, 916, 1041, 1545, 1549
BtsI	GCAGTG	1 cut(s)	780
BtsIMutI	CAGTG	5 cut(s)	462, 729, 780, 786, 1075
BveI	ACCTGC	4 cut(s)	1480, 1657, 1663, 1931
Cac8I	GCNNGC	8 cut(s)	163, 214, 229, 607, 1606, 1610, 1629, 1639
CfoI	GCGC	1 cut(s)	999
Cfr13I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1646, 1907
CsiI	ACCWGGT	1 cut(s)	859
Csp6I	GTAC	6 cut(s)	197, 661, 1133, 1206, 1837, 1875
CviAII	CATG	6 cut(s)	162, 380, 879, 928, 1015, 1798
CviQI	GTAC	6 cut(s)	197, 661, 1133, 1206, 1837, 1875
DdeI	CTNAG	5 cut(s)	24, 893, 1283, 1336, 1840
DpnI	GATC	9 cut(s)	60, 339, 534, 684, 786, 870, 1146, 1702, 1796
DpnII	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
DraIII	CACNNNGTG	1 cut(s)	863
EaeI	YGGCCR	1 cut(s)	1879
Eam1104I	CTCTTC	4 cut(s)	804, 1560, 1755, 1858
EarI	CTCTTC	4 cut(s)	804, 1560, 1755, 1858
Ecl136II	GAGCTC	1 cut(s)	1570
Eco130I	CCWWGG	4 cut(s)	32, 1578, 1740, 1858
Eco147I	AGGCCT	1 cut(s)	668
Eco24I	GRGCYC	2 cut(s)	1462, 1572
Eco31I	GGTCTC	1 cut(s)	1016
Eco32I	GATATC	2 cut(s)	1521, 1894
Eco47I	GGWCC	4 cut(s)	64, 463, 1646, 1907
Eco53kI	GAGCTC	1 cut(s)	1570
Eco57I	CTGAAG	5 cut(s)	639, 894, 1584, 1653, 1939
Eco88I	CYCGRG	1 cut(s)	1329
EcoICRI	GAGCTC	1 cut(s)	1570
EcoO109I	RGGNCCY	1 cut(s)	463
EcoRII	CCWGG	4 cut(s)	859, 1182, 1461, 1488
EcoRV	GATATC	2 cut(s)	1521, 1894
EcoT14I	CCWWGG	4 cut(s)	32, 1578, 1740, 1858
EcoT38I	GRGCYC	2 cut(s)	1462, 1572
ErhI	CCWWGG	4 cut(s)	32, 1578, 1740, 1858
Esp3I	CGTCTC	1 cut(s)	1560
FaeI	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1801
FalI	AAGNNNNNCTT	4 cut(s)	964, 996, 1308, 1340
FaqI	GGGAC	3 cut(s)	449, 939, 1412
FatI	CATG	6 cut(s)	161, 379, 878, 927, 1014, 1797
FauI	CCCGC	2 cut(s)	385, 573
FauNDI	CATATG	1 cut(s)	1195
FblI	GTMKAC	1 cut(s)	1028
Fnu4HI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
FokI	GGATG	6 cut(s)	581, 910, 923, 1028, 1552, 1556
FriOI	GRGCYC	2 cut(s)	1462, 1572
Fsp4HI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
FspBI	CTAG	6 cut(s)	33, 71, 432, 468, 1605, 1859
GlaI	GCGC	1 cut(s)	998
GluI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
GsaI	CCCAGC	3 cut(s)	273, 1181, 1507
GsuI	CTGGAG	4 cut(s)	243, 671, 1124, 1250
HaeIII	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1881
HhaI	GCGC	1 cut(s)	999
Hin1II	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1801
Hin6I	GCGC	1 cut(s)	997
HinP1I	GCGC	1 cut(s)	997
HincII	GTYRAC	4 cut(s)	322, 1419, 1435, 1695
HindII	GTYRAC	4 cut(s)	322, 1419, 1435, 1695
HinfI	GANTC	6 cut(s)	26, 742, 1405, 1466, 1745, 1898
HpaI	GTTAAC	2 cut(s)	1419, 1435
HphI	GGTGA	4 cut(s)	875, 960, 1461, 1492
Hpy166II	GTNNAC	7 cut(s)	322, 562, 1029, 1419, 1435, 1551, 1695
Hpy188I	TCNGA	6 cut(s)	643, 741, 747, 949, 1513, 1592
Hpy188III	TCNNGA	7 cut(s)	116, 222, 474, 688, 872, 1329, 1957
Hpy8I	GTNNAC	7 cut(s)	322, 562, 1029, 1419, 1435, 1551, 1695
HpyAV	CCTTC	8 cut(s)	76, 244, 391, 736, 967, 1010, 1181, 1835
HpyCH4III	ACNGT	6 cut(s)	89, 238, 457, 649, 781, 1688
HpyCH4IV	ACGT	3 cut(s)	40, 601, 1553
HpyCH4V	TGCA	9 cut(s)	308, 605, 1037, 1627, 1641, 1652, 1721, 1801, 1940
HpyF10VI	GCNNNNNNNGC	4 cut(s)	398, 526, 1108, 1628
HpyF3I	CTNAG	5 cut(s)	24, 893, 1283, 1336, 1840
HpySE526I	ACGT	3 cut(s)	40, 601, 1553
Hsp92II	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1801
HspAI	GCGC	1 cut(s)	997
KspAI	GTTAAC	2 cut(s)	1419, 1435
Kzo9I	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
LguI	GCTCTTC	3 cut(s)	804, 1560, 1858
LmnI	GCTCC	3 cut(s)	224, 1105, 1171
Lsp1109I	GCAGC	3 cut(s)	1049, 1120, 1186
LweI	GCATC	3 cut(s)	10, 295, 1730
MabI	ACCWGGT	1 cut(s)	859
MaeI	CTAG	6 cut(s)	33, 71, 432, 468, 1605, 1859
MaeII	ACGT	3 cut(s)	40, 601, 1553
MaeIII	GTNAC	4 cut(s)	89, 775, 1374, 1669
MalI	GATC	9 cut(s)	60, 339, 534, 684, 786, 870, 1146, 1702, 1796
MboI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
MfeI	CAATTG	2 cut(s)	1032, 1929
MflI	RGATCY	4 cut(s)	532, 682, 868, 1700
MhlI	GDGCHC	3 cut(s)	816, 1462, 1572
MlyI	GAGTC	3 cut(s)	35, 1399, 1892
MmeI	TCCRAC	4 cut(s)	91, 184, 622, 770
MnlI	CCTC	9 cut(s)	400, 454, 484, 894, 928, 1001, 1345, 1530, 1978
MroXI	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1597
MspA1I	CMGCKG	2 cut(s)	1177, 1228
MspR9I	CCNGG	4 cut(s)	861, 1184, 1463, 1490
MunI	CAATTG	2 cut(s)	1032, 1929
MvaI	CCWGG	4 cut(s)	861, 1184, 1463, 1490
MvnI	CGCG	3 cut(s)	540, 1169, 1368
MwoI	GCNNNNNNNGC	4 cut(s)	398, 526, 1108, 1628
NdeI	CATATG	1 cut(s)	1195
NdeII	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
NheI	GCTAGC	1 cut(s)	1604
NlaIII	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1801
NlaIV	GGNNCC	3 cut(s)	411, 465, 1702
NmeAIII	GCCGAG	1 cut(s)	1907
NmuCI	GTSAC	3 cut(s)	89, 775, 1374
NspI	RCATGY	2 cut(s)	165, 882
PaeI	GCATGC	1 cut(s)	165
PaqCI	CACCTGC	3 cut(s)	1480, 1663, 1931
PceI	AGGCCT	1 cut(s)	668
PciSI	GCTCTTC	3 cut(s)	804, 1560, 1858
PcsI	WCGNNNNNNNCGW	1 cut(s)	330
PdmI	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1597
PfeI	GAWTC	3 cut(s)	742, 1466, 1745
PflFI	GACNNNGTC	1 cut(s)	572
PflMI	CCANNNNNTGG	2 cut(s)	44, 172
PkrI	GCNGC	4 cut(s)	522, 1039, 1110, 1176
PleI	GAGTC	3 cut(s)	34, 1399, 1892
PpsI	GAGTC	3 cut(s)	34, 1399, 1892
PpuMI	RGGWCCY	1 cut(s)	463
Psp124BI	GAGCTC	1 cut(s)	1572
Psp5II	RGGWCCY	1 cut(s)	463
Psp6I	CCWGG	4 cut(s)	859, 1182, 1461, 1488
PspFI	CCCAGC	3 cut(s)	269, 1177, 1503
PspGI	CCWGG	4 cut(s)	859, 1182, 1461, 1488
PspN4I	GGNNCC	3 cut(s)	411, 465, 1702
PspPI	GGNCC	6 cut(s)	64, 215, 463, 1180, 1646, 1907
PspPPI	RGGWCCY	1 cut(s)	463
PsuI	RGATCY	4 cut(s)	532, 682, 868, 1700
PsyI	GACNNNGTC	1 cut(s)	572
PvuII	CAGCTG	2 cut(s)	1177, 1228
RsaI	GTAC	6 cut(s)	198, 662, 1134, 1207, 1838, 1876
RsaNI	GTAC	6 cut(s)	197, 661, 1133, 1206, 1837, 1875
SacI	GAGCTC	1 cut(s)	1572
SapI	GCTCTTC	3 cut(s)	804, 1560, 1858
SatI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
Sau3AI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1700, 1794
Sau96I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1646, 1907
ScaI	AGTACT	3 cut(s)	198, 1838, 1876
SchI	GAGTC	3 cut(s)	35, 1399, 1892
ScrFI	CCNGG	4 cut(s)	861, 1184, 1463, 1490
SduI	GDGCHC	3 cut(s)	816, 1462, 1572
SexAI	ACCWGGT	1 cut(s)	859
SfaNI	GCATC	3 cut(s)	10, 295, 1730
SfcI	CTRYAG	1 cut(s)	448
SinI	GGWCC	4 cut(s)	64, 463, 1646, 1907
SpeI	ACTAGT	1 cut(s)	70
SphI	GCATGC	1 cut(s)	165
SseBI	AGGCCT	1 cut(s)	668
SsiI	CCGC	5 cut(s)	392, 520, 580, 1169, 1366
SspMI	CTAG	6 cut(s)	33, 71, 432, 468, 1605, 1859
SstI	GAGCTC	1 cut(s)	1572
StuI	AGGCCT	1 cut(s)	668
StyD4I	CCNGG	4 cut(s)	859, 1182, 1461, 1488
StyI	CCWWGG	4 cut(s)	32, 1578, 1740, 1858
TaaI	ACNGT	6 cut(s)	89, 238, 457, 649, 781, 1688
TaiI	ACGT	3 cut(s)	43, 604, 1556
TaqI	TCGA	3 cut(s)	333, 475, 1896
TaqII	GACCGA	1 cut(s)	108
TatI	WGTACW	4 cut(s)	196, 660, 1836, 1874
TauI	GCSGC	1 cut(s)	523
TfiI	GAWTC	3 cut(s)	742, 1466, 1745
TscAI	CASTG	5 cut(s)	462, 736, 780, 786, 1075
TseFI	GTSAC	3 cut(s)	89, 775, 1374
TseI	GCWGC	3 cut(s)	1037, 1108, 1174
Tsp45I	GTSAC	3 cut(s)	89, 775, 1374
TspDTI	ATGAA	4 cut(s)	114, 620, 949, 1182
TspGWI	ACGGA	2 cut(s)	260, 1740
TspRI	CASTG	5 cut(s)	462, 736, 780, 786, 1075
Tth111I	GACNNNGTC	1 cut(s)	572
Van91I	CCANNNNNTGG	2 cut(s)	44, 172
VpaK11BI	GGWCC	4 cut(s)	64, 463, 1646, 1907
XapI	RAATTY	2 cut(s)	716, 1221
XceI	RCATGY	2 cut(s)	165, 882
XmaJI	CCTAGG	2 cut(s)	32, 1858
XmiI	GTMKAC	1 cut(s)	1028
XmnI	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1597
XspI	CTAG	6 cut(s)	33, 71, 432, 468, 1605, 1859
ZrmI	AGTACT	3 cut(s)	198, 1838, 1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.