Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0025350.1

Orthogroup ID

OG0003308

Physical Location & Seq

Genomic Coordinates Reverse (-)

28043 .. 32792

Gene Structure 4750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0025350.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

atggctaaagatacaaatgatgctgagtcgcctaggccacgttctggtctattgcgagatcaggtccaactagttaaaaggaaggactgtgaccgatatgaaattgcccccattccagatatactttcgtttgagaaaggtttctttatagtgatacgggcatgccagttgttggctcaaaagaatgatgggatagtactcgttggagtagcaggcccatctggagcaggcaagactgttttcacggagaaggtgctgaactttatgcccagcattgctgtcattacaatggataactacaatgatgctagtcgtatcattgacggcaacttcgatgatccacgcctgacagattatgagacatttcttgaaaacatacatggcttaaaagcggggaaggctgttgaggttccaatatatgatttcaaatctagctctcgcataggctacaggacagtggaggtccctagctctcgtattgtaataattgagggcatatatgccttaaatgagaaattgcggcctttgctggatcttcgcgtgtctataactggtggagttcactttgaccttgtcaaacgggttttacgagacatccaacgtgcaggccaagagcctgaagaaattattcatcaaatctctgaaacggtgtatcctatgtacaaggcctttattgagccagatctccagacagcacatattaaaattaccaataaatttaatcccttcactggttttcagaatccgacttatatattaaagtcaaatagggcagtgacagtggatcaaatcaaggctgttgtttttgaagagcacaaagaaaccagagaagaaacttatgacatatatcttttaccaccaggtgaagatcctgaagcatgtcaatcgtatctaaggatgaggaacagggatggaaaatacaatctcatgtttgaggagtgggtttcggatagtcccttcataatatcaccaagaataacttttgtagttagtgtgcgccttcttggaggtctcatggctctggggtatacaattgcagccatcctaaaaagaagcagtcatattttcagtgatgatagggtctgcgtgaaaactgattggctggagcagcttaatcgtcaatatgttcaggtacaaggaaaggatcgtctgtatgttaaatatatcgcggagcagctgggcctggaaggttcatatgttccccgtacttacattgaacaaattcagctggagaaacttgtaaatgatgttatggccttaccagatgatttgaagacaaagctcagcatagatgatgattttgtttcaagccctaaagaagccctttcccgagcctcagcagataggagaagcaagtatctcaaccgggacaagactctttccaagttaacaaggctttctgttaacaatagaatgtttgatgggagagccctggaatcacctgctacaatttcaaaccagggagttatcacccagctttcagaacagatatctacgctgaatgagaggatggatgagtttacgtctcgtgttgaagagctcaactccaagttcttggtcagaaaaacttcagctagccagcagaacttggctttgcagggtgaagcgtgcaatggacctgcacctacttctctttttgttactggattaagcaacggtgcgttgacaggatccctactgccaagttctgcatcttcttcacaattagccaaggaatctccattgatggaagagatacaagcaatcacacgaagccaacgccagatcatgcaccaaatagacaatttgagcaaccttctacgggagtactcagccgagagacttcgcctaggaagagcagatagtactggccgagtgaatgatatcaactccattggtccaattatacttgctttggcaattggtggtgtaggtgtcttgttcttcaggagtttgacctcccaaaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

CYTH PRK

Protein Analysis

649

Amino Acids

72.87

Weight (kDa)

6.47

Isoelectric Point (pI)

46.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73980 AT1G73980 AT1G73980
fragaria_vesca	FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040 FvH4_5g13040
malus_domestica	MD06G1207600.v1.1 MD06G1207800.v1.1 MD14G1218200.v1.1
prunus_persica	Prupe.5G212000_v2.0.a1 Prupe.5G212000_v2.0.a1
pyrus_communis	pycom06g18560 pycom06g18570 pycom14g18090
rosa_chinensis	RchiOBHm_Chr7g0184091
rosa_laevigata	RLG00000005001
rosa_multiflora	Rmu_sc0004712.1_g000008 Rmu_sc0025350.1_g000011
rosa_roxburghii	Rroxscaffold_3G00269890
rosa_rugosa	Rorug06G0462800 Rorug06G0462900
rosa_samantha	Rh7AG082900 Rh7BG064100 Rh7CG064800 Rh7DG064300
rosa_wichuraiana	Rw7G005270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1450
Acc36I	ACCTGC	2 cut(s)	1450, 1627
AccB7I	CCANNNNNTGG	2 cut(s)	44, 172
AccI	GTMKAC	1 cut(s)	1028
AccII	CGCG	2 cut(s)	540, 1169
AciI	CCGC	3 cut(s)	392, 520, 1169
AclWI	GGATC	7 cut(s)	332, 540, 792, 863, 1152, 1665, 1678
AcoI	YGGCCR	1 cut(s)	1849
AcsI	RAATTY	2 cut(s)	716, 1221
AcuI	CTGAAG	4 cut(s)	639, 894, 1554, 1909
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	6 cut(s)	198, 662, 1134, 1207, 1808, 1846
AfiI	CCNNNNNNNGG	4 cut(s)	44, 172, 731, 1801
AgsI	TTSAA	8 cut(s)	371, 427, 809, 1217, 1273, 1308, 1455, 1535
AhlI	ACTAGT	1 cut(s)	70
AjnI	CCWGG	4 cut(s)	859, 1182, 1431, 1458
AluBI	AGCT	9 cut(s)	435, 471, 1111, 1177, 1228, 1282, 1477, 1540, 1574
AluI	AGCT	9 cut(s)	435, 471, 1111, 1177, 1228, 1282, 1477, 1540, 1574
Alw21I	GWGCWC	2 cut(s)	816, 1542
Alw26I	GTCTC	5 cut(s)	353, 585, 1016, 1530, 1813
AlwI	GGATC	7 cut(s)	332, 540, 792, 863, 1152, 1665, 1678
Ama87I	CYCGRG	1 cut(s)	1329
AoxI	GGCC	8 cut(s)	35, 214, 521, 607, 666, 1180, 1254, 1849
ApeKI	GCWGC	3 cut(s)	1037, 1108, 1174
ApoI	RAATTY	2 cut(s)	716, 1221
ArsI	GACNNNNNNTTYG	2 cut(s)	314, 346
Asp700I	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1567
AspA2I	CCTAGG	2 cut(s)	32, 1828
AspLEI	GCGC	1 cut(s)	999
AspS9I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1616, 1877
AsuC2I	CCSGG	1 cut(s)	1367
AsuHPI	GGTGA	5 cut(s)	875, 960, 1431, 1462, 1613
AsuNHI	GCTAGC	1 cut(s)	1574
AvaI	CYCGRG	1 cut(s)	1329
AvaII	GGWCC	4 cut(s)	64, 463, 1616, 1877
AvrII	CCTAGG	2 cut(s)	32, 1828
BamHI	GGATCC	1 cut(s)	1670
BanII	GRGCYC	2 cut(s)	1432, 1542
BauI	CACGAG	1 cut(s)	1527
BbsI	GAAGAC	1 cut(s)	1280
Bbv12I	GWGCWC	2 cut(s)	816, 1542
BbvCI	CCTCAGC	1 cut(s)	1336
BbvI	GCAGC	3 cut(s)	1049, 1120, 1186
BccI	CCATC	7 cut(s)	182, 226, 905, 1049, 1415, 1504, 1720
BceAI	ACGGC	1 cut(s)	340
BcgI	CGANNNNNNTGC	4 cut(s)	867, 901, 1097, 1131
BciT130I	CCWGG	4 cut(s)	861, 1184, 1433, 1460
BciVI	GTATCC	1 cut(s)	663
BcnI	CCSGG	1 cut(s)	1367
BcoDI	GTCTC	5 cut(s)	353, 585, 1016, 1530, 1813
BcuI	ACTAGT	1 cut(s)	70
BfaI	CTAG	7 cut(s)	33, 71, 309, 432, 468, 1575, 1829
BfmI	CTRYAG	1 cut(s)	448
BfuAI	ACCTGC	2 cut(s)	1450, 1627
BfuI	GTATCC	1 cut(s)	663
BglII	AGATCT	1 cut(s)	682
BisI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
BlnI	CCTAGG	2 cut(s)	32, 1828
BlpI	GCTNAGC	1 cut(s)	1283
BlsI	GCNGC	4 cut(s)	522, 1039, 1110, 1176
BmcAI	AGTACT	3 cut(s)	198, 1808, 1846
Bme1390I	CCNGG	5 cut(s)	861, 1184, 1367, 1433, 1460
Bme18I	GGWCC	4 cut(s)	64, 463, 1616, 1877
BmeT110I	CYCGRG	1 cut(s)	1329
BmgT120I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1616, 1877
BmiI	GGNNCC	3 cut(s)	411, 465, 1672
BmrFI	CCNGG	5 cut(s)	861, 1184, 1367, 1433, 1460
BmsI	GCATC	3 cut(s)	10, 295, 1700
BmtI	GCTAGC	1 cut(s)	1578
BpiI	GAAGAC	1 cut(s)	1280
BplI	GAGNNNNNCTC	2 cut(s)	1529, 1561
BpmI	CTGGAG	4 cut(s)	243, 671, 1124, 1250
Bpu10I	CCTNAGC	1 cut(s)	1336
Bpu1102I	GCTNAGC	1 cut(s)	1283
BpuMI	CCSGG	1 cut(s)	1367
BsaI	GGTCTC	1 cut(s)	1016
BsaJI	CCNNGG	5 cut(s)	32, 1431, 1459, 1710, 1828
Bsc4I	CCNNNNNNNGG	4 cut(s)	44, 172, 731, 1801
Bse1I	ACTGG	5 cut(s)	166, 556, 736, 1648, 1852
Bse3DI	GCAATG	2 cut(s)	273, 1618
BseBI	CCWGG	4 cut(s)	861, 1184, 1433, 1460
BseDI	CCNNGG	5 cut(s)	32, 1431, 1459, 1710, 1828
BseGI	GGATG	6 cut(s)	594, 903, 916, 1041, 1515, 1519
BseLI	CCNNNNNNNGG	4 cut(s)	44, 172, 731, 1801
BseMI	GCAATG	2 cut(s)	273, 1618
BseMII	CTCAG	4 cut(s)	15, 1297, 1350, 1824
BseNI	ACTGG	5 cut(s)	166, 556, 736, 1648, 1852
BseRI	GAGGAG	1 cut(s)	950
BseXI	GCAGC	3 cut(s)	1049, 1120, 1186
BseYI	CCCAGC	3 cut(s)	269, 1177, 1473
BsgI	GTGCAG	2 cut(s)	624, 1605
Bsh1236I	CGCG	2 cut(s)	540, 1169
BshFI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1851
BsiHKAI	GWGCWC	2 cut(s)	816, 1542
BsiHKCI	CYCGRG	1 cut(s)	1329
BsiSI	CCGG	1 cut(s)	1366
BslFI	GGGAC	3 cut(s)	449, 939, 1382
BslI	CCNNNNNNNGG	4 cut(s)	44, 172, 731, 1801
BsmAI	GTCTC	5 cut(s)	353, 585, 1016, 1530, 1813
BsmBI	CGTCTC	1 cut(s)	1530
BsmFI	GGGAC	3 cut(s)	449, 939, 1382
BsnI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1851
Bso31I	GGTCTC	1 cut(s)	1016
BsoBI	CYCGRG	1 cut(s)	1329
Bsp1286I	GDGCHC	3 cut(s)	816, 1432, 1542
Bsp1407I	TGTACA	1 cut(s)	660
Bsp143I	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
Bsp1720I	GCTNAGC	1 cut(s)	1283
BspACI	CCGC	3 cut(s)	392, 520, 1169
BspANI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1851
BspCNI	CTCAG	4 cut(s)	16, 1296, 1349, 1823
BspFNI	CGCG	2 cut(s)	540, 1169
BspLI	GGNNCC	3 cut(s)	411, 465, 1672
BspMI	ACCTGC	2 cut(s)	1450, 1627
BspOI	GCTAGC	1 cut(s)	1578
BspPI	GGATC	7 cut(s)	332, 540, 792, 863, 1152, 1665, 1678
BspQI	GCTCTTC	3 cut(s)	804, 1530, 1828
BspTNI	GGTCTC	1 cut(s)	1016
BsrDI	GCAATG	2 cut(s)	273, 1618
BsrGI	TGTACA	1 cut(s)	660
BsrI	ACTGG	5 cut(s)	166, 556, 736, 1648, 1852
BssECI	CCNNGG	5 cut(s)	32, 1431, 1459, 1710, 1828
BssMI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
BssNAI	GTATAC	1 cut(s)	1029
BssSI	CACGAG	1 cut(s)	1527
BssT1I	CCWWGG	3 cut(s)	32, 1710, 1828
Bst1107I	GTATAC	1 cut(s)	1029
Bst2BI	CACGAG	1 cut(s)	1527
Bst2UI	CCWGG	4 cut(s)	861, 1184, 1433, 1460
Bst4CI	ACNGT	6 cut(s)	89, 238, 457, 649, 781, 1658
Bst6I	CTCTTC	4 cut(s)	804, 1530, 1725, 1828
BstAUI	TGTACA	1 cut(s)	660
BstC8I	GCNNGC	7 cut(s)	163, 214, 229, 607, 1576, 1580, 1609
BstDEI	CTNAG	5 cut(s)	24, 893, 1283, 1336, 1810
BstF5I	GGATG	6 cut(s)	594, 903, 916, 1041, 1515, 1519
BstFNI	CGCG	2 cut(s)	540, 1169
BstHHI	GCGC	1 cut(s)	999
BstKTI	GATC	9 cut(s)	61, 340, 535, 685, 787, 871, 1147, 1673, 1767
BstMAI	GTCTC	5 cut(s)	353, 585, 1016, 1530, 1813
BstMBI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
BstMWI	GCNNNNNNNGC	3 cut(s)	398, 526, 1108
BstNI	CCWGG	4 cut(s)	861, 1184, 1433, 1460
BstNSI	RCATGY	2 cut(s)	165, 882
BstSCI	CCNGG	5 cut(s)	859, 1182, 1365, 1431, 1458
BstSFI	CTRYAG	1 cut(s)	448
BstUI	CGCG	2 cut(s)	540, 1169
BstV1I	GCAGC	3 cut(s)	1049, 1120, 1186
BstV2I	GAAGAC	1 cut(s)	1280
BstX2I	RGATCY	4 cut(s)	532, 682, 868, 1670
BstXI	CCANNNNNNTGG	1 cut(s)	1555
BstYI	RGATCY	4 cut(s)	532, 682, 868, 1670
BstZ17I	GTATAC	1 cut(s)	1029
BsuI	GTATCC	1 cut(s)	663
BsuRI	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1851
BtsCI	GGATG	6 cut(s)	594, 903, 916, 1041, 1515, 1519
BtsI	GCAGTG	1 cut(s)	780
BtsIMutI	CAGTG	5 cut(s)	462, 729, 780, 786, 1075
BveI	ACCTGC	2 cut(s)	1450, 1627
Cac8I	GCNNGC	7 cut(s)	163, 214, 229, 607, 1576, 1580, 1609
CfoI	GCGC	1 cut(s)	999
Cfr13I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1616, 1877
CsiI	ACCWGGT	1 cut(s)	859
Csp6I	GTAC	6 cut(s)	197, 661, 1133, 1206, 1807, 1845
CviAII	CATG	6 cut(s)	162, 380, 879, 928, 1015, 1768
CviQI	GTAC	6 cut(s)	197, 661, 1133, 1206, 1807, 1845
DdeI	CTNAG	5 cut(s)	24, 893, 1283, 1336, 1810
DpnI	GATC	9 cut(s)	60, 339, 534, 684, 786, 870, 1146, 1672, 1766
DpnII	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
DraIII	CACNNNGTG	1 cut(s)	863
EaeI	YGGCCR	1 cut(s)	1849
Eam1104I	CTCTTC	4 cut(s)	804, 1530, 1725, 1828
EarI	CTCTTC	4 cut(s)	804, 1530, 1725, 1828
Ecl136II	GAGCTC	1 cut(s)	1540
Eco130I	CCWWGG	3 cut(s)	32, 1710, 1828
Eco147I	AGGCCT	1 cut(s)	668
Eco24I	GRGCYC	2 cut(s)	1432, 1542
Eco31I	GGTCTC	1 cut(s)	1016
Eco32I	GATATC	2 cut(s)	1491, 1864
Eco47I	GGWCC	4 cut(s)	64, 463, 1616, 1877
Eco53kI	GAGCTC	1 cut(s)	1540
Eco57I	CTGAAG	4 cut(s)	639, 894, 1554, 1909
Eco88I	CYCGRG	1 cut(s)	1329
EcoICRI	GAGCTC	1 cut(s)	1540
EcoO109I	RGGNCCY	1 cut(s)	463
EcoRII	CCWGG	4 cut(s)	859, 1182, 1431, 1458
EcoRV	GATATC	2 cut(s)	1491, 1864
EcoT14I	CCWWGG	3 cut(s)	32, 1710, 1828
EcoT38I	GRGCYC	2 cut(s)	1432, 1542
ErhI	CCWWGG	3 cut(s)	32, 1710, 1828
Esp3I	CGTCTC	1 cut(s)	1530
FaeI	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1771
FalI	AAGNNNNNCTT	4 cut(s)	964, 996, 1308, 1340
FaqI	GGGAC	3 cut(s)	449, 939, 1382
FatI	CATG	6 cut(s)	161, 379, 878, 927, 1014, 1767
FauI	CCCGC	1 cut(s)	385
FauNDI	CATATG	1 cut(s)	1195
FblI	GTMKAC	1 cut(s)	1028
Fnu4HI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
FokI	GGATG	6 cut(s)	581, 910, 923, 1028, 1522, 1526
FriOI	GRGCYC	2 cut(s)	1432, 1542
Fsp4HI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
FspBI	CTAG	7 cut(s)	33, 71, 309, 432, 468, 1575, 1829
GlaI	GCGC	1 cut(s)	998
GluI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
GsaI	CCCAGC	3 cut(s)	273, 1181, 1477
GsuI	CTGGAG	4 cut(s)	243, 671, 1124, 1250
HaeIII	GGCC	8 cut(s)	37, 216, 523, 609, 668, 1182, 1256, 1851
HapII	CCGG	1 cut(s)	1366
HhaI	GCGC	1 cut(s)	999
Hin1II	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1771
Hin6I	GCGC	1 cut(s)	997
HinP1I	GCGC	1 cut(s)	997
HincII	GTYRAC	3 cut(s)	1389, 1405, 1665
HindII	GTYRAC	3 cut(s)	1389, 1405, 1665
HinfI	GANTC	5 cut(s)	26, 742, 1375, 1436, 1715
HpaI	GTTAAC	2 cut(s)	1389, 1405
HpaII	CCGG	1 cut(s)	1366
HphI	GGTGA	5 cut(s)	875, 960, 1431, 1462, 1613
Hpy166II	GTNNAC	6 cut(s)	562, 1029, 1389, 1405, 1521, 1665
Hpy188I	TCNGA	6 cut(s)	643, 741, 747, 949, 1483, 1562
Hpy188III	TCNNGA	7 cut(s)	116, 222, 368, 688, 872, 1329, 1927
Hpy8I	GTNNAC	6 cut(s)	562, 1029, 1389, 1405, 1521, 1665
HpyAV	CCTTC	8 cut(s)	76, 244, 391, 736, 967, 1010, 1181, 1805
HpyCH4III	ACNGT	6 cut(s)	89, 238, 457, 649, 781, 1658
HpyCH4IV	ACGT	3 cut(s)	40, 601, 1523
HpyCH4V	TGCA	7 cut(s)	605, 1037, 1597, 1611, 1622, 1691, 1771
HpyF10VI	GCNNNNNNNGC	3 cut(s)	398, 526, 1108
HpyF3I	CTNAG	5 cut(s)	24, 893, 1283, 1336, 1810
HpySE526I	ACGT	3 cut(s)	40, 601, 1523
Hsp92II	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1771
HspAI	GCGC	1 cut(s)	997
KspAI	GTTAAC	2 cut(s)	1389, 1405
Kzo9I	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
LguI	GCTCTTC	3 cut(s)	804, 1530, 1828
LmnI	GCTCC	3 cut(s)	224, 1105, 1171
Lsp1109I	GCAGC	3 cut(s)	1049, 1120, 1186
LweI	GCATC	3 cut(s)	10, 295, 1700
MabI	ACCWGGT	1 cut(s)	859
MaeI	CTAG	7 cut(s)	33, 71, 309, 432, 468, 1575, 1829
MaeII	ACGT	3 cut(s)	40, 601, 1523
MaeIII	GTNAC	3 cut(s)	89, 775, 1639
MalI	GATC	9 cut(s)	60, 339, 534, 684, 786, 870, 1146, 1672, 1766
MboI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
MfeI	CAATTG	2 cut(s)	1032, 1899
MflI	RGATCY	4 cut(s)	532, 682, 868, 1670
MhlI	GDGCHC	3 cut(s)	816, 1432, 1542
MlyI	GAGTC	2 cut(s)	35, 1369
MmeI	TCCRAC	4 cut(s)	91, 184, 622, 770
MnlI	CCTC	9 cut(s)	400, 454, 484, 894, 928, 1001, 1345, 1500, 1948
MroXI	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1567
MslI	CAYNNNNRTG	1 cut(s)	287
MspA1I	CMGCKG	2 cut(s)	1177, 1228
MspI	CCGG	1 cut(s)	1366
MspR9I	CCNGG	5 cut(s)	861, 1184, 1367, 1433, 1460
MunI	CAATTG	2 cut(s)	1032, 1899
MvaI	CCWGG	4 cut(s)	861, 1184, 1433, 1460
MvnI	CGCG	2 cut(s)	540, 1169
MwoI	GCNNNNNNNGC	3 cut(s)	398, 526, 1108
NciI	CCSGG	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1195
NdeII	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
NheI	GCTAGC	1 cut(s)	1574
NlaIII	CATG	6 cut(s)	165, 383, 882, 931, 1018, 1771
NlaIV	GGNNCC	3 cut(s)	411, 465, 1672
NmeAIII	GCCGAG	2 cut(s)	1840, 1877
NmuCI	GTSAC	2 cut(s)	89, 775
NspI	RCATGY	2 cut(s)	165, 882
PaeI	GCATGC	1 cut(s)	165
PaqCI	CACCTGC	1 cut(s)	1450
PceI	AGGCCT	1 cut(s)	668
PciSI	GCTCTTC	3 cut(s)	804, 1530, 1828
PcsI	WCGNNNNNNNCGW	2 cut(s)	330, 586
PdmI	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1567
PfeI	GAWTC	3 cut(s)	742, 1436, 1715
PflFI	GACNNNGTC	1 cut(s)	572
PflMI	CCANNNNNTGG	2 cut(s)	44, 172
PkrI	GCNGC	4 cut(s)	522, 1039, 1110, 1176
PleI	GAGTC	2 cut(s)	34, 1369
PpsI	GAGTC	2 cut(s)	34, 1369
PpuMI	RGGWCCY	1 cut(s)	463
Psp124BI	GAGCTC	1 cut(s)	1542
Psp5II	RGGWCCY	1 cut(s)	463
Psp6I	CCWGG	4 cut(s)	859, 1182, 1431, 1458
PspFI	CCCAGC	3 cut(s)	269, 1177, 1473
PspGI	CCWGG	4 cut(s)	859, 1182, 1431, 1458
PspN4I	GGNNCC	3 cut(s)	411, 465, 1672
PspPI	GGNCC	6 cut(s)	64, 215, 463, 1180, 1616, 1877
PspPPI	RGGWCCY	1 cut(s)	463
PsuI	RGATCY	4 cut(s)	532, 682, 868, 1670
PsyI	GACNNNGTC	1 cut(s)	572
PvuII	CAGCTG	2 cut(s)	1177, 1228
RsaI	GTAC	6 cut(s)	198, 662, 1134, 1207, 1808, 1846
RsaNI	GTAC	6 cut(s)	197, 661, 1133, 1206, 1807, 1845
RseI	CAYNNNNRTG	1 cut(s)	287
SacI	GAGCTC	1 cut(s)	1542
SapI	GCTCTTC	3 cut(s)	804, 1530, 1828
SatI	GCNGC	4 cut(s)	521, 1038, 1109, 1175
Sau3AI	GATC	9 cut(s)	58, 337, 532, 682, 784, 868, 1144, 1670, 1764
Sau96I	GGNCC	6 cut(s)	64, 215, 463, 1180, 1616, 1877
ScaI	AGTACT	3 cut(s)	198, 1808, 1846
SchI	GAGTC	2 cut(s)	35, 1369
ScrFI	CCNGG	5 cut(s)	861, 1184, 1367, 1433, 1460
SduI	GDGCHC	3 cut(s)	816, 1432, 1542
SexAI	ACCWGGT	1 cut(s)	859
SfaNI	GCATC	3 cut(s)	10, 295, 1700
SfcI	CTRYAG	1 cut(s)	448
SinI	GGWCC	4 cut(s)	64, 463, 1616, 1877
SmiMI	CAYNNNNRTG	1 cut(s)	287
SpeI	ACTAGT	1 cut(s)	70
SphI	GCATGC	1 cut(s)	165
SseBI	AGGCCT	1 cut(s)	668
SsiI	CCGC	3 cut(s)	392, 520, 1169
SspMI	CTAG	7 cut(s)	33, 71, 309, 432, 468, 1575, 1829
SstI	GAGCTC	1 cut(s)	1542
StuI	AGGCCT	1 cut(s)	668
StyD4I	CCNGG	5 cut(s)	859, 1182, 1365, 1431, 1458
StyI	CCWWGG	3 cut(s)	32, 1710, 1828
TaaI	ACNGT	6 cut(s)	89, 238, 457, 649, 781, 1658
TaiI	ACGT	3 cut(s)	43, 604, 1526
TaqI	TCGA	1 cut(s)	333
TaqII	GACCGA	1 cut(s)	108
TatI	WGTACW	4 cut(s)	196, 660, 1806, 1844
TauI	GCSGC	1 cut(s)	523
TfiI	GAWTC	3 cut(s)	742, 1436, 1715
TscAI	CASTG	5 cut(s)	462, 736, 780, 786, 1075
TseFI	GTSAC	2 cut(s)	89, 775
TseI	GCWGC	3 cut(s)	1037, 1108, 1174
Tsp45I	GTSAC	2 cut(s)	89, 775
TspDTI	ATGAA	4 cut(s)	114, 620, 949, 1182
TspGWI	ACGGA	1 cut(s)	260
TspRI	CASTG	5 cut(s)	462, 736, 780, 786, 1075
Tth111I	GACNNNGTC	1 cut(s)	572
Van91I	CCANNNNNTGG	2 cut(s)	44, 172
VpaK11BI	GGWCC	4 cut(s)	64, 463, 1616, 1877
XapI	RAATTY	2 cut(s)	716, 1221
XceI	RCATGY	2 cut(s)	165, 882
XmaJI	CCTAGG	2 cut(s)	32, 1828
XmiI	GTMKAC	1 cut(s)	1028
XmnI	GAANNNNTTC	4 cut(s)	140, 627, 1221, 1567
XspI	CTAG	7 cut(s)	33, 71, 309, 432, 468, 1575, 1829
ZrmI	AGTACT	3 cut(s)	198, 1808, 1846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.