MD06G1218100.v1.1

Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
35016952 .. 35019834
2883 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1218100.v1.1.491

Sequence Viewer

Length: 2883 bp
ATGGCGGGTTCCTCCCTCATGGAAAACCTCTTCCAGCGCACGCTGGAGGACCTAATCAAAGGCCTCCGCCTCCAGCTCATCGGCGAGTCCGCCTTCCTCTCCAAAGCCCTCGACGAAATCCGCCGCGAGATCAAATCCACCGACGCCGACACTAAAGCCAACGCCCTCCACAAGCTCACCTACCTCTCCTCCCTCCACTTCTACAACATGTCCTTCGCTGCCTTCCACGTCGTCGAGCTCCTCTCCTCCACCCGCTTTTCCCACAAGAAGATCGCCTACCACGCCGCCGCCCACTCCTTCTCCGACGACACTCCCGTCCTCGTCCTCATCACCAACCAGCTCCGCAAGGACCTCACCTCTACCAACGAGCTCGAGGTAAGCTTAGCGCTCGAATGCCTTTCTAGAATTGCTACTATAGATCTTGCTAGGGATTTGACACCAGAGATTTTCACCTTGCTGGGTAGCGGCAAGGTTTTCGTCCGAAAGAAAGCAATTGGTGTGCTTTTGAGGGTGTTTGATAAATACCCAGATGCTGTGAGGGTGTGTTTTAAGCGTTTGGTTGAGAATTTGGAGAGTCCTGACTCGCAGATTGTGTCTGTGGCTGTTGGGGTGTTTTGTGAGCTTGCTTTGAGAGAACCCAGATCATATCTTCCGATGGCGCCTGAGTTTTATAAGATCTTGGTTGATTCCAAGAACAACTGGGTTTTGATTAAGGTGTTGAAGATATTTGCAAAGTTGGCTCCTTTAGAACCTAGGTTGGCGAAGAGGGTTGTTGAGCCAGTTTGTGAGCATATCAGGAGGACTGGGGCCAAATCATTGTTGTTTGAGTGTATTAGGACAGTGATGACCGGTTTGAGTGATTATGAATCTGCAGTGAAGGTTGTCGTTGTGAAGATTCGGGAAATGCTAGTTGATGATGATCCGAATCTCAAGTATCTTGCGTTGCAGGCACTTTCGGTGGTTGCCCCAAAGCACTTGTGGGCAGTGTTGGAGAATAAGGAGGTTGTGATTAAGTCTTTGAGTGATGTGGATACGAATATCAGGCTGGAGTCTTTGCGTCTTGTTATGGCAATGCTGTCTGAGAATAATGTGGCTGAAATTTGCAGGGTGTTGGTCAATTATGCTCTTAAATCTGATTCCGAGTTTTGCAATGAGATTTTGGATTCCATTTTATCAACATGCTGCAGTAATGTGTACGAGATTATTATTGACTTCGATTGGTATGTATCACTTCTGGGAGAAATGGCGAGGATCCCGCATTGCCAGAAGGGGGAAGAAATTGAGAAGCAGCTTATTGATATTGGTATGAGGGTCAAGGAAGTTAGACCAGAGCTTGTCCGGGTCAGTCGTGATCTGCTGATTGATCCTGCATTACCTGGTAATCCTTTCTTACACAGGATATTGTCGGCTGCTGCTTGGTTGTCAGGGCAATATGTTGAATTCTTGATAAACCCGTTTGAGCTCATGGAGGCACTATTACAGCCTCGTACAATTCTCTTGGCACCATTTATAAGAGCAATATATGTACAGTCTGCTCTTAAAGTTTTAGTCTTTTGTTTAAATTCTTACCTTTTGCAGAGGGGGAATACTGCTTCCTTTTCAACTTTTGATGGATTGGTTTTGGAACGAGATGACCCAGAGAGTTCTATTTTGGCATCATGTGATGCTCCTGTGCATTGCATACAGGATGAAGGATTCAACCCGAGGGTTTTAAATCAATCTTTTGAAGGTCTTTCTGTGGAATATGATGGGGAGGAAACTTCTACTCTTGGGCAGACATCTGCATTGTCTTCATTGAAGGACGGTTTCACACGTGAATCTATCATAAACCTTTTAAATCGAGTTGAATTGGCTGTGACTCCACTAACGGGAAGCTATGATGTAGAAATACTAGAGAGAGCACGGAATATACTTTGTTTCATCGAGTTGATTAGGCAAGAACTGCTTGATAGTCCAGTACACAAGGACGAAAGTTTGGAAAGTGAAGAAGCACAAGTGTCCCAAATCATCAAAGTGATGCATGATGCCTTTTCAAGTGATCTAGGTCCTGTCTCGGTGAGTGCTCAAGAAAGAGTTCCTGTACCAGATGGGTTAATGCTTGCAGAGAATCTTGAAGACTTGGAAAAAATCTTCGGTGATGTTCAACTACCTTCGTTAAGTTCATTTTCTCTTGGAAGCCCACAGTATGAGGAGAGAGCTGGTTTTTCTATTCCTATCCATGAAAGCAAAGAAGAGCCAGCGCCATCGAACGAATCCACGTCTCTGCTTGCAGAGCACCGTAAGCAGCACGGTTTATATTATCTTTCCTCTGCGAAGAAGGAAGATAATTATCCACCTGCCAATGATCCTAAATTACAGGTTGATACTAATGACGATGACGAAGATCTAGTTAAATTACTTGTTTCAAAGAAAAAGCCATGTCATGCAAAGCCTCGGCCTGTGGTGGTGAAATTAGATGGAGATCAAGCACCTATTGCAGCCAACCCTCGCCCGAAGGAAGATGTGTTGTCTGGTACCGTGCAAAACGTTCTTTTAGGTAGCGACACCAATCCCACTTCATCTCAGAGTAAAGTATCCACCAAGTCATCGAGTAAGAGAAAAGGAAAGGAGAAACTAAATGTTGATTCTGCTAAAGAAAACTTGGGTGATGTTGAAAAGCATGATCTAGGAAACCCAAGTTCAAGAAATAGCAAGCACCATAGTCATGGTAAAGGGAGAAGACACGGAAGCCCAGGGAAGAAGGGAGATGAAAGAGAAGAAAATGGTCAGAAAGTGAAGCAGAAAAGTAGTCATAGACATAGTAAGCACCAAGCTCGACAACGAGCGGAAGTGCCTTTGAATGTGGTTGCACAAACACCGGTCGTTCCAGATTTTCTTTTGTAG

Protein Analysis

961

Amino Acids

107.06

Weight (kDa)

5.85

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 34 - 502 5.3e-81 Adaptin N terminal region
Cnd1 PF12717 128 - 271 1.8e-08 non-SMC mitotic condensation complex subunit 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011187)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 672, 1511
AarI CACCTGC 1 cut(s) 2344
AasI GACNNNNNNGTC 1 cut(s) 314
Acc36I ACCTGC 1 cut(s) 2344
Acc65I GGTACC 1 cut(s) 2513
AccB1I GGYRCC 3 cut(s) 658, 1501, 2513
AccBSI CCGCTC 1 cut(s) 2825
AccII CGCG 1 cut(s) 126
AclI AACGTT 1 cut(s) 2526
AclWI GGATC 5 cut(s) 914, 1246, 1259, 1358, 2339
AcsI RAATTY 4 cut(s) 565, 1098, 1439, 1561
AcvI CACGTG 1 cut(s) 1814
AcyI GRCGYC 2 cut(s) 144, 659
AfaI GTAC 6 cut(s) 1196, 1489, 1527, 1959, 2082, 2515
AfeI AGCGCT 1 cut(s) 387
AfiI CCNNNNNNNGG 2 cut(s) 1270, 1868
AflIII ACRYGT 2 cut(s) 207, 1811
AgeI ACCGGT 2 cut(s) 848, 2857
AjiI CACGTC 2 cut(s) 229, 2259
AjnI CCWGG 2 cut(s) 1375, 2731
Alw21I GWGCWC 6 cut(s) 240, 372, 1464, 1903, 2065, 2277
Alw26I GTCTC 2 cut(s) 2056, 2265
AlwI GGATC 5 cut(s) 914, 1246, 1259, 1358, 2339
AlwNI CAGNNNCTG 1 cut(s) 533
Ama87I CYCGRG 2 cut(s) 371, 1702
Aor51HI AGCGCT 1 cut(s) 387
AoxI GGCC 3 cut(s) 61, 807, 2435
ApeKI GCWGC 7 cut(s) 218, 1182, 1288, 1409, 1412, 2284, 2477
ApoI RAATTY 4 cut(s) 565, 1098, 1439, 1561
AsiGI ACCGGT 2 cut(s) 848, 2857
Asp700I GAANNNNTTC 1 cut(s) 2073
Asp718I GGTACC 1 cut(s) 2513
AspA2I CCTAGG 1 cut(s) 752
AspLEI GCGC 4 cut(s) 39, 388, 661, 2242
AspS9I GGNCC 4 cut(s) 49, 349, 807, 2045
AsuC2I CCSGG 1 cut(s) 1340
AsuHPI GGTGA 8 cut(s) 169, 322, 346, 442, 2068, 2147, 2458, 2657
AvaI CYCGRG 2 cut(s) 371, 1702
AvaII GGWCC 3 cut(s) 49, 349, 2045
AvrII CCTAGG 1 cut(s) 752
BamHI GGATCC 1 cut(s) 1251
BanI GGYRCC 3 cut(s) 658, 1501, 2513
BanII GRGCYC 3 cut(s) 240, 372, 1464
BarI GAAGNNNNNNTAC 2 cut(s) 260, 292
BbrPI CACGTG 1 cut(s) 1814
BbsI GAAGAC 3 cut(s) 1782, 2121, 2725
Bbv12I GWGCWC 6 cut(s) 240, 372, 1464, 1903, 2065, 2277
BbvI GCAGC 7 cut(s) 205, 1169, 1300, 1396, 1399, 2296, 2489
BccI CCATC 6 cut(s) 649, 1604, 1742, 2081, 2251, 2450
BcgI CGANNNNNNTGC 4 cut(s) 457, 491, 2795, 2829
BciT130I CCWGG 2 cut(s) 1377, 2733
BciVI GTATCC 2 cut(s) 1024, 2584
BcnI CCSGG 1 cut(s) 1340
BcoDI GTCTC 2 cut(s) 2056, 2265
BfaI CTAG 8 cut(s) 402, 426, 753, 908, 1892, 2042, 2387, 2666
BfmI CTRYAG 3 cut(s) 414, 870, 1183
BfoI RGCGCY 3 cut(s) 389, 662, 2243
BfuAI ACCTGC 1 cut(s) 2344
BfuI GTATCC 2 cut(s) 1024, 2584
BglII AGATCT 3 cut(s) 418, 675, 2383
BlnI CCTAGG 1 cut(s) 752
BlpI GCTNAGC 1 cut(s) 382
Bme1390I CCNGG 3 cut(s) 1340, 1377, 2733
Bme18I GGWCC 3 cut(s) 49, 349, 2045
BmeT110I CYCGRG 2 cut(s) 371, 1702
BmgBI CACGTC 2 cut(s) 229, 2259
BmgT120I GGNCC 4 cut(s) 49, 349, 807, 2045
BmiI GGNNCC 7 cut(s) 10, 660, 741, 808, 1253, 1503, 2515
BmrFI CCNGG 3 cut(s) 1340, 1377, 2733
BmrI ACTGGG 2 cut(s) 709, 813
BmsI GCATC 5 cut(s) 520, 1654, 1664, 2007, 2014
BmuI ACTGGG 2 cut(s) 709, 813
BpiI GAAGAC 3 cut(s) 1782, 2121, 2725
BplI GAGNNNNNCTC 2 cut(s) 227, 259
BpmI CTGGAG 3 cut(s) 56, 65, 1067
Bpu1102I GCTNAGC 1 cut(s) 382
BpuEI CTTGAG 2 cut(s) 914, 2049
BpuMI CCSGG 1 cut(s) 1340
BsaAI YACGTR 1 cut(s) 1814
BsaBI GATNNNNATC 4 cut(s) 918, 924, 2328, 2460
BsaHI GRCGYC 2 cut(s) 144, 659
BsaJI CCNNGG 5 cut(s) 752, 1703, 2432, 2731, 2732
BsaWI WCCGGW 2 cut(s) 848, 2857
BsaXI ACNNNNNCTCC 4 cut(s) 173, 203, 284, 314
Bsc4I CCNNNNNNNGG 2 cut(s) 1270, 1868
Bse118I RCCGGY 2 cut(s) 848, 2857
Bse1I ACTGG 4 cut(s) 704, 779, 808, 1955
Bse3DI GCAATG 4 cut(s) 1077, 1156, 1258, 1675
Bse8I GATNNNNATC 4 cut(s) 918, 924, 2328, 2460
BseBI CCWGG 2 cut(s) 1377, 2733
BseDI CCNNGG 5 cut(s) 752, 1703, 2432, 2731, 2732
BseGI GGATG 1 cut(s) 1693
BseJI GATNNNNATC 4 cut(s) 918, 924, 2328, 2460
BseLI CCNNNNNNNGG 2 cut(s) 1270, 1868
BseMI GCAATG 4 cut(s) 1077, 1156, 1258, 1675
BseMII CTCAG 3 cut(s) 654, 1071, 2576
BseNI ACTGG 4 cut(s) 704, 779, 808, 1955
BseRI GAGGAG 4 cut(s) 178, 230, 235, 2204
BseXI GCAGC 7 cut(s) 205, 1169, 1300, 1396, 1399, 2296, 2489
BseYI CCCAGC 1 cut(s) 457
Bsh1236I CGCG 1 cut(s) 126
Bsh1285I CGRYCG 1 cut(s) 2862
BshFI GGCC 3 cut(s) 63, 809, 2437
BshNI GGYRCC 3 cut(s) 658, 1501, 2513
BshTI ACCGGT 2 cut(s) 848, 2857
BsiEI CGRYCG 1 cut(s) 2862
BsiHKAI GWGCWC 6 cut(s) 240, 372, 1464, 1903, 2065, 2277
BsiHKCI CYCGRG 2 cut(s) 371, 1702
BsiSI CCGG 3 cut(s) 849, 1339, 2858
BslFI GGGAC 1 cut(s) 1984
BslI CCNNNNNNNGG 2 cut(s) 1270, 1868
BsmAI GTCTC 2 cut(s) 2056, 2265
BsmBI CGTCTC 1 cut(s) 2265
BsmFI GGGAC 1 cut(s) 1984
BsmI GAATGC 1 cut(s) 398
BsnI GGCC 3 cut(s) 63, 809, 2437
BsoBI CYCGRG 2 cut(s) 371, 1702
Bsp1286I GDGCHC 6 cut(s) 240, 372, 1464, 1903, 2065, 2277
Bsp1407I TGTACA 1 cut(s) 1525
Bsp1720I GCTNAGC 1 cut(s) 382
BspANI GGCC 3 cut(s) 63, 809, 2437
BspCNI CTCAG 3 cut(s) 655, 1072, 2575
BspFNI CGCG 1 cut(s) 126
BspLI GGNNCC 7 cut(s) 10, 660, 741, 808, 1253, 1503, 2515
BspMAI CTGCAG 2 cut(s) 874, 1187
BspMI ACCTGC 1 cut(s) 2344
BspPI GGATC 5 cut(s) 914, 1246, 1259, 1358, 2339
BspQI GCTCTTC 1 cut(s) 2226
BspT107I GGYRCC 3 cut(s) 658, 1501, 2513
BsrBI CCGCTC 1 cut(s) 2825
BsrDI GCAATG 4 cut(s) 1077, 1156, 1258, 1675
BsrFI RCCGGY 2 cut(s) 848, 2857
BsrGI TGTACA 1 cut(s) 1525
BsrI ACTGG 4 cut(s) 704, 779, 808, 1955
BssAI RCCGGY 2 cut(s) 848, 2857
BssECI CCNNGG 5 cut(s) 752, 1703, 2432, 2731, 2732
BssNI GRCGYC 2 cut(s) 144, 659
BssT1I CCWWGG 1 cut(s) 752
Bst2UI CCWGG 2 cut(s) 1377, 2733
Bst4CI ACNGT 7 cut(s) 841, 1530, 1805, 2184, 2279, 2291, 2518
Bst6I CTCTTC 3 cut(s) 35, 758, 2226
BstACI GRCGYC 2 cut(s) 144, 659
BstAPI GCANNNNNTGC 2 cut(s) 1942, 2474
BstAUI TGTACA 1 cut(s) 1525
BstBAI YACGTR 1 cut(s) 1814
BstC8I GCNNGC 7 cut(s) 41, 624, 948, 2100, 2238, 2268, 2693
BstDEI CTNAG 4 cut(s) 382, 663, 1080, 2562
BstF5I GGATG 1 cut(s) 1693
BstFNI CGCG 1 cut(s) 126
BstH2I RGCGCY 3 cut(s) 389, 662, 2243
BstHHI GCGC 4 cut(s) 39, 388, 661, 2242
BstMAI GTCTC 2 cut(s) 2056, 2265
BstMCI CGRYCG 1 cut(s) 2862
BstMWI GCNNNNNNNGC 7 cut(s) 281, 737, 947, 1942, 2272, 2281, 2474
BstNI CCWGG 2 cut(s) 1377, 2733
BstNSI RCATGY 2 cut(s) 211, 1182
BstSCI CCNGG 3 cut(s) 1338, 1375, 2731
BstSFI CTRYAG 3 cut(s) 414, 870, 1183
BstUI CGCG 1 cut(s) 126
BstV1I GCAGC 7 cut(s) 205, 1169, 1300, 1396, 1399, 2296, 2489
BstV2I GAAGAC 3 cut(s) 1782, 2121, 2725
BstX2I RGATCY 4 cut(s) 418, 675, 1251, 2383
BstXI CCANNNNNNTGG 1 cut(s) 2705
BstYI RGATCY 4 cut(s) 418, 675, 1251, 2383
BsuI GTATCC 2 cut(s) 1024, 2584
BsuRI GGCC 3 cut(s) 63, 809, 2437
BtrI CACGTC 2 cut(s) 229, 2259
BtsCI GGATG 1 cut(s) 1693
BtsI GCAGTG 2 cut(s) 879, 990
BtsIMutI CAGTG 3 cut(s) 846, 879, 990
BveI ACCTGC 1 cut(s) 2344
Cac8I GCNNGC 7 cut(s) 41, 624, 948, 2100, 2238, 2268, 2693
CaiI CAGNNNCTG 1 cut(s) 533
CfoI GCGC 4 cut(s) 39, 388, 661, 2242
Cfr10I RCCGGY 2 cut(s) 848, 2857
Cfr13I GGNCC 4 cut(s) 49, 349, 807, 2045
CseI GACGC 2 cut(s) 152, 1046
CsiI ACCWGGT 1 cut(s) 1375
Csp6I GTAC 6 cut(s) 1195, 1488, 1526, 1958, 2081, 2514
CspAI ACCGGT 2 cut(s) 848, 2857
CviQI GTAC 6 cut(s) 1195, 1488, 1526, 1958, 2081, 2514
DdeI CTNAG 4 cut(s) 382, 663, 1080, 2562
DinI GGCGCC 1 cut(s) 660
DraI TTTAAA 3 cut(s) 1560, 1713, 1836
DrdI GACNNNNNNGTC 1 cut(s) 314
DseDI GACNNNNNNGTC 1 cut(s) 314
Eam1104I CTCTTC 3 cut(s) 35, 758, 2226
EarI CTCTTC 3 cut(s) 35, 758, 2226
EciI GGCGGA 3 cut(s) 56, 79, 110
Ecl136II GAGCTC 3 cut(s) 238, 370, 1462
Eco130I CCWWGG 1 cut(s) 752
Eco147I AGGCCT 1 cut(s) 63
Eco24I GRGCYC 3 cut(s) 240, 372, 1464
Eco47I GGWCC 3 cut(s) 49, 349, 2045
Eco47III AGCGCT 1 cut(s) 387
Eco53kI GAGCTC 3 cut(s) 238, 370, 1462
Eco72I CACGTG 1 cut(s) 1814
Eco88I CYCGRG 2 cut(s) 371, 1702
EcoICRI GAGCTC 3 cut(s) 238, 370, 1462
EcoO109I RGGNCCY 3 cut(s) 49, 349, 2045
EcoRI GAATTC 1 cut(s) 1439
EcoRII CCWGG 2 cut(s) 1375, 2731
EcoT14I CCWWGG 1 cut(s) 752
EcoT22I ATGCAT 1 cut(s) 2022
EcoT38I GRGCYC 3 cut(s) 240, 372, 1464
EgeI GGCGCC 1 cut(s) 660
EheI GGCGCC 1 cut(s) 660
ErhI CCWWGG 1 cut(s) 752
Esp3I CGTCTC 1 cut(s) 2265
FalI AAGNNNNNCTT 2 cut(s) 1929, 1961
FaqI GGGAC 1 cut(s) 1984
FauI CCCGC 2 cut(s) 260, 1263
FokI GGATG 1 cut(s) 1700
FriOI GRGCYC 3 cut(s) 240, 372, 1464
FspBI CTAG 8 cut(s) 402, 426, 753, 908, 1892, 2042, 2387, 2666
GlaI GCGC 4 cut(s) 38, 387, 660, 2241
GsaI CCCAGC 1 cut(s) 461
GsuI CTGGAG 3 cut(s) 56, 65, 1067
HaeII RGCGCY 3 cut(s) 389, 662, 2243
HaeIII GGCC 3 cut(s) 63, 809, 2437
HapII CCGG 3 cut(s) 849, 1339, 2858
HgaI GACGC 2 cut(s) 152, 1046
HhaI GCGC 4 cut(s) 39, 388, 661, 2242
Hin1I GRCGYC 2 cut(s) 144, 659
Hin6I GCGC 4 cut(s) 37, 386, 659, 2240
HinP1I GCGC 4 cut(s) 37, 386, 659, 2240
HindIII AAGCTT 1 cut(s) 379
HpaII CCGG 3 cut(s) 849, 1339, 2858
HphI GGTGA 8 cut(s) 169, 322, 346, 442, 2068, 2147, 2458, 2657
Hpy166II GTNNAC 2 cut(s) 1195, 1960
Hpy188I TCNGA 9 cut(s) 304, 482, 654, 924, 1081, 1135, 1141, 2565, 2769
Hpy8I GTNNAC 2 cut(s) 1195, 1960
Hpy99I CGWCG 5 cut(s) 116, 146, 233, 236, 308
HpyCH4III ACNGT 7 cut(s) 841, 1530, 1805, 2184, 2279, 2291, 2518
HpyCH4IV ACGT 4 cut(s) 228, 1813, 2258, 2526
HpyF10VI GCNNNNNNNGC 7 cut(s) 281, 737, 947, 1942, 2272, 2281, 2474
HpyF3I CTNAG 4 cut(s) 382, 663, 1080, 2562
HpySE526I ACGT 4 cut(s) 228, 1813, 2258, 2526
Hsp92I GRCGYC 2 cut(s) 144, 659
HspAI GCGC 4 cut(s) 37, 386, 659, 2240
KasI GGCGCC 1 cut(s) 658
KpnI GGTACC 1 cut(s) 2517
LguI GCTCTTC 1 cut(s) 2226
LmnI GCTCC 4 cut(s) 243, 345, 745, 1672
Lsp1109I GCAGC 7 cut(s) 205, 1169, 1300, 1396, 1399, 2296, 2489
LweI GCATC 5 cut(s) 520, 1654, 1664, 2007, 2014
MabI ACCWGGT 1 cut(s) 1375
MaeI CTAG 8 cut(s) 402, 426, 753, 908, 1892, 2042, 2387, 2666
MaeII ACGT 4 cut(s) 228, 1813, 2258, 2526
MaeIII GTNAC 1 cut(s) 1855
MbiI CCGCTC 1 cut(s) 2825
MfeI CAATTG 1 cut(s) 492
MflI RGATCY 4 cut(s) 418, 675, 1251, 2383
MhlI GDGCHC 6 cut(s) 240, 372, 1464, 1903, 2065, 2277
Mly113I GGCGCC 1 cut(s) 659
MlyI GAGTC 5 cut(s) 95, 575, 583, 1058, 1852
MmeI TCCRAC 2 cut(s) 327, 969
Mph1103I ATGCAT 1 cut(s) 2022
MroXI GAANNNNTTC 1 cut(s) 2073
MslI CAYNNNNRTG 2 cut(s) 2012, 2703
MspI CCGG 3 cut(s) 849, 1339, 2858
MspR9I CCNGG 3 cut(s) 1340, 1377, 2733
MunI CAATTG 1 cut(s) 492
Mva1269I GAATGC 1 cut(s) 398
MvaI CCWGG 2 cut(s) 1377, 2733
MvnI CGCG 1 cut(s) 126
MwoI GCNNNNNNNGC 7 cut(s) 281, 737, 947, 1942, 2272, 2281, 2474
NarI GGCGCC 1 cut(s) 659
NciI CCSGG 1 cut(s) 1340
NlaIV GGNNCC 7 cut(s) 10, 660, 741, 808, 1253, 1503, 2515
NmeAIII GCCGAG 1 cut(s) 2413
NmuCI GTSAC 1 cut(s) 1855
NsiI ATGCAT 1 cut(s) 2022
NspI RCATGY 2 cut(s) 211, 1182
PaeR7I CTCGAG 1 cut(s) 371
PaqCI CACCTGC 1 cut(s) 2344
PasI CCCWGGG 1 cut(s) 2732
PceI AGGCCT 1 cut(s) 63
PciI ACATGT 1 cut(s) 207
PciSI GCTCTTC 1 cut(s) 2226
PcsI WCGNNNNNNNCGW 1 cut(s) 312
PctI GAATGC 1 cut(s) 398
PdmI GAANNNNTTC 1 cut(s) 2073
PinAI ACCGGT 2 cut(s) 848, 2857
PleI GAGTC 5 cut(s) 94, 575, 582, 1057, 1852
PluTI GGCGCC 1 cut(s) 662
PmaCI CACGTG 1 cut(s) 1814
PmlI CACGTG 1 cut(s) 1814
PpsI GAGTC 5 cut(s) 94, 575, 582, 1057, 1852
Ppu21I YACGTR 1 cut(s) 1814
PpuMI RGGWCCY 3 cut(s) 49, 349, 2045
PscI ACATGT 1 cut(s) 207
PsiI TTATAA 2 cut(s) 672, 1511
Psp124BI GAGCTC 3 cut(s) 240, 372, 1464
Psp1406I AACGTT 1 cut(s) 2526
Psp5II RGGWCCY 3 cut(s) 49, 349, 2045
Psp6I CCWGG 2 cut(s) 1375, 2731
PspCI CACGTG 1 cut(s) 1814
PspFI CCCAGC 1 cut(s) 457
PspGI CCWGG 2 cut(s) 1375, 2731
PspN4I GGNNCC 7 cut(s) 10, 660, 741, 808, 1253, 1503, 2515
PspPI GGNCC 4 cut(s) 49, 349, 807, 2045
PspPPI RGGWCCY 3 cut(s) 49, 349, 2045
PspXI VCTCGAGB 1 cut(s) 371
PstI CTGCAG 2 cut(s) 874, 1187
PstNI CAGNNNCTG 1 cut(s) 533
PsuI RGATCY 4 cut(s) 418, 675, 1251, 2383
RsaI GTAC 6 cut(s) 1196, 1489, 1527, 1959, 2082, 2515
RsaNI GTAC 6 cut(s) 1195, 1488, 1526, 1958, 2081, 2514
RseI CAYNNNNRTG 2 cut(s) 2012, 2703
SacI GAGCTC 3 cut(s) 240, 372, 1464
SapI GCTCTTC 1 cut(s) 2226
Sau96I GGNCC 4 cut(s) 49, 349, 807, 2045
SchI GAGTC 5 cut(s) 95, 575, 583, 1058, 1852
ScrFI CCNGG 3 cut(s) 1340, 1377, 2733
SduI GDGCHC 6 cut(s) 240, 372, 1464, 1903, 2065, 2277
SexAI ACCWGGT 1 cut(s) 1375
SfaNI GCATC 5 cut(s) 520, 1654, 1664, 2007, 2014
SfcI CTRYAG 3 cut(s) 414, 870, 1183
SfoI GGCGCC 1 cut(s) 660
Sfr274I CTCGAG 1 cut(s) 371
SinI GGWCC 3 cut(s) 49, 349, 2045
SlaI CTCGAG 1 cut(s) 371
SmiMI CAYNNNNRTG 2 cut(s) 2012, 2703
SmlI CTYRAG 3 cut(s) 371, 929, 2064
SmoI CTYRAG 3 cut(s) 371, 929, 2064
SseBI AGGCCT 1 cut(s) 63
SspDI GGCGCC 1 cut(s) 658
SspMI CTAG 8 cut(s) 402, 426, 753, 908, 1892, 2042, 2387, 2666
SstI GAGCTC 3 cut(s) 240, 372, 1464
StuI AGGCCT 1 cut(s) 63
StyD4I CCNGG 3 cut(s) 1338, 1375, 2731
StyI CCWWGG 1 cut(s) 752
TaaI ACNGT 7 cut(s) 841, 1530, 1805, 2184, 2279, 2291, 2518
TaiI ACGT 4 cut(s) 231, 1816, 2261, 2529
TatI WGTACW 2 cut(s) 1525, 1957
TauI GCSGC 4 cut(s) 126, 287, 290, 468
TscAI CASTG 3 cut(s) 846, 879, 990
TseFI GTSAC 1 cut(s) 1855
TseI GCWGC 7 cut(s) 218, 1182, 1288, 1409, 1412, 2284, 2477
Tsp45I GTSAC 1 cut(s) 1855
TspDTI ATGAA 8 cut(s) 879, 1704, 1782, 1909, 2151, 2235, 2547, 2763
TspGWI ACGGA 2 cut(s) 1918, 2739
TspRI CASTG 3 cut(s) 846, 879, 990
VpaK11BI GGWCC 3 cut(s) 49, 349, 2045
XapI RAATTY 4 cut(s) 565, 1098, 1439, 1561
XbaI TCTAGA 1 cut(s) 401
XceI RCATGY 2 cut(s) 211, 1182
XcmI CCANNNNNNNNNTGG 1 cut(s) 975
XhoI CTCGAG 1 cut(s) 371
XmaJI CCTAGG 1 cut(s) 752
XmnI GAANNNNTTC 1 cut(s) 2073
XspI CTAG 8 cut(s) 402, 426, 753, 908, 1892, 2042, 2387, 2666
Zsp2I ATGCAT 1 cut(s) 2022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.