Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002952.1

Orthogroup ID

OG0011187

Physical Location & Seq

Genomic Coordinates Forward (+)

24197 .. 27088

Gene Structure 2892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002952.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

atggcggggttctcggtgatggacacactgttccagcgcacactggacgacctaatcaaggggctccgcctccagctgatgggcgagtcggcgttcctgtccaaagccctagacgaaatccgccgcgaggccaagtccaccgaccccgacaccaaatccgccgccctcctcaagctcacctacctctcctccctccacttctacgacatgtcgttcgccgccttccacgtcgtcgagctcctctcgtccacccgcttctcccacaagaagatcgcctaccacgccgcctcccactcgttcgacgactccacgccggtgctcgtcctcatcaccaaccagctccgcaaggacctcaccagcaccaacgagttcgaggtaagcttagcgcttgaatgcctttccagaattgccactgtagatctcgctagggatttgacgcctgagatattcacattgctggccagcagcaaagtgttcgtgagaaagaaggcaattggtgtggttctgagagtgtttgataggtatccggattcggtgagggtgtgttttaagcgtttggttgagaatctagagacttcggattcacaggttgtgtctgtggctgtgggggtgttttgtgagctggctctgagagatcccacctcttatcttccgctggcgcctgagttttacaagattttggtggattccaagaacaattgggtcttgattaaggtgttgaagatatttgcaaagttggctcccttagagccgaggttggctaagagggttgttgagccggtttgcgagcatatcaggaggactggggctaagtcgttgttgtttgagtgcattaggactgtggtgagcagtttgagcgattatgaacacgctgtgaagcttgctgttgtgaagattcgggaaatgttggtggatgatgatccgaatctgaagtatcttggattgcaagcgctttcggttgtggccccgaagcacttgtgggcggtgttggagaacaaggaggttgtgattaagtctttgagtgatgtggatccaaatattaagctcgagtcgttgcgtcttgttatggcaatggtgtctgagagtaatgtggctgaaatttcaagggttttggtcaactatgcccttaagtctgatccggagttctgcaatttgatactgggttccattttatcgacatgttgtagaaatgtgtacgagattattattgactttgattggtatgtatcacttctgggagaaatgtcaaggataccacattgccagaaaggagaagaaattgaaaagcagcttattgatattggtatgagggtcaaggatgttagaccagagcttgttcgagtcagtcgtgatttgctgattgatccagcattacttggtaatcctttcttacacaggacattatcagccgctgcttggttgtcaggggaatatgttgagttctcggtaaacccatttgaactcatggaagcactattacagcctcgtacaagtctcttaccaccgttattaaaagcaatatatatacagtctgcgttcaaagtcttaatcttttgtctgaattcttaccttttgctgaggggggatgctgcttcctccttgtattctgataaattggtgccagatgtcccaggattgttctctgaacgggatagcgtagggtgttcggacttggcatcatgtgatgctcctgttgaggccgaactggatgaaggattcaacccaagggatttaaatcaatcatttggaggtctttctgtagaatatggtggggaggaaacttctacttgtgggcaggcatcggcatctgcttcattgaaggacagtttcacgcatgaatctatcacaaaccttttaaatagagttgaattggctgtggttccacttacaagaagctatgatgtagaaatagtagagagagcacgaaatgtactttgtttcattgagttgattaagccacaaatgcctgattgtctagttcagaaagaggagagctcagatacggaagaagcagaagcatccaaaatcattaaattgatgcatgatgccttctcaaatgatctgggtcctatctcagtaagcgctcaggaaagagtttctgtaccagatggtttagtgcttgtggagaatcttgaggacttggaaacaatctgtggtgatgttcaactaccttcattaaattcattttcccatggaagttctcattttgaggaaatggctggtgtttctatccctatctttcaaagcaaagaagagccagggccatcaaatgaatccacatctctgcttgcagaacaccgtaagcagcatggcttatattatcttccttcagaaaaaaaggatggtgattatccacctgccaatgaccctcagttacaggctaactcaaatgacgatgaagatcttgccaagcttacagagcagttacttgtttcaaagaaaaagccaaaccatgcaaagcctaggcctgttgtggtgaaattagatggagatcaagtacctattgcagctggtccacattcacaggaagatttgctgtctggtacagtgcgggatgttcttctaggaagtgagacaaaacccaccactaggtcatctactaagagaaaagggaaggagaagctaaacgttgattctaccaccgaatccaaggaaaatttgggtgatgtagaaaagcaagatcaaggaaactctagtacgagaaaaagcaagcctcatactcatagtaaagggagaaggcacagaagcccggggaagaagggagacgaaggagaagaaaactgtcagaaagcaaagccaaaaagtagtggtaggcacaaagctcggcaacgagcagatgcgccattgaatgtggtttcacaaacaccagtaattccagattttctcttgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006886 GO:0006903 GO:0006996 GO:0007032 GO:0007033 GO:0008104 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016050 GO:0016192 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0080171 GO:1990019

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N

Protein Analysis

963

Amino Acids

106.78

Weight (kDa)

5.6

Isoelectric Point (pI)

40.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48760 AT1G48760 AT1G48760
fragaria_vesca	FvH4_5g11850
malus_domestica	MD06G1218100.v1.1 MD14G1228200.v1.1
prunus_persica	Prupe.5G223200_v2.0.a1
pyrus_communis	pycom06g19420 pycom14g18960
rosa_chinensis	RchiOBHm_Chr7g0185741
rosa_laevigata	RLG00000004886
rosa_multiflora	Rmu_sc0002121.1_g000007 Rmu_sc0002952.1_g000005
rosa_roxburghii	Rroxscaffold_3G00268650
rosa_rugosa	Rorug06G0471100
rosa_samantha	Rh7AG071300 Rh7BG076600 Rh7CG076600 Rh7DG076400
rosa_wichuraiana	Rw7G006380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2365
Acc36I	ACCTGC	1 cut(s)	2365
AccB1I	GGYRCC	2 cut(s)	658, 1618
AccB7I	CCANNNNNTGG	1 cut(s)	79
AccII	CGCG	1 cut(s)	126
AccIII	TCCGGA	2 cut(s)	526, 1138
AclI	AACGTT	1 cut(s)	2628
AclWI	GGATC	6 cut(s)	629, 914, 1025, 1038, 1130, 1358
AcoI	YGGCCR	1 cut(s)	459
AcsI	RAATTY	4 cut(s)	1098, 1561, 2179, 2656
AcuI	CTGAAG	2 cut(s)	950, 2313
AcyI	GRCGYC	2 cut(s)	437, 659
AdeI	CACNNNGTG	1 cut(s)	874
AfaI	GTAC	7 cut(s)	1196, 1489, 1932, 2103, 2499, 2545, 2698
AfeI	AGCGCT	3 cut(s)	387, 951, 2083
AfiI	CCNNNNNNNGG	5 cut(s)	58, 79, 127, 1416, 2589
AflII	CTTAAG	1 cut(s)	1127
AflIII	ACRYGT	2 cut(s)	207, 1178
AjiI	CACGTC	1 cut(s)	229
AjnI	CCWGG	2 cut(s)	1630, 2257
AleI	CACNNNNGTG	1 cut(s)	314
AloI	GAACNNNNNNTCC	2 cut(s)	14, 46
Alw21I	GWGCWC	4 cut(s)	240, 321, 1924, 1997
Alw26I	GTCTC	4 cut(s)	566, 1499, 2567, 2757
AlwI	GGATC	6 cut(s)	629, 914, 1025, 1038, 1130, 1358
AlwNI	CAGNNNCTG	1 cut(s)	1412
Ama87I	CYCGRG	2 cut(s)	1046, 2749
Aor13HI	TCCGGA	2 cut(s)	526, 1138
Aor51HI	AGCGCT	3 cut(s)	387, 951, 2083
AoxI	GGCC	6 cut(s)	129, 459, 963, 1698, 2261, 2465
ApeKI	GCWGC	6 cut(s)	465, 1288, 1412, 1589, 2305, 2507
ApoI	RAATTY	4 cut(s)	1098, 1561, 2179, 2656
ArsI	GACNNNNNNTTYG	2 cut(s)	197, 229
AspA2I	CCTAGG	1 cut(s)	2462
AspLEI	GCGC	6 cut(s)	39, 388, 661, 952, 2084, 2842
AspS9I	GGNCC	5 cut(s)	349, 964, 2066, 2261, 2513
AsuC2I	CCSGG	2 cut(s)	2750, 2751
AvaI	CYCGRG	2 cut(s)	1046, 2749
AvaII	GGWCC	3 cut(s)	349, 2066, 2513
AvrII	CCTAGG	1 cut(s)	2462
BalI	TGGCCA	1 cut(s)	461
BamHI	GGATCC	1 cut(s)	1030
BanI	GGYRCC	2 cut(s)	658, 1618
BanII	GRGCYC	3 cut(s)	66, 240, 1997
BarI	GAAGNNNNNNTAC	4 cut(s)	260, 292, 1461, 1493
Bbv12I	GWGCWC	4 cut(s)	240, 321, 1924, 1997
BbvCI	CCTCAGC	1 cut(s)	1577
BbvI	GCAGC	6 cut(s)	477, 1300, 1399, 1576, 2317, 2519
BccI	CCATC	6 cut(s)	13, 73, 2102, 2272, 2336, 2480
BcgI	CGANNNNNNTGC	4 cut(s)	457, 491, 2804, 2838
BciT130I	CCWGG	2 cut(s)	1632, 2259
BciVI	GTATCC	2 cut(s)	534, 1245
BcnI	CCSGG	2 cut(s)	2750, 2751
BcoDI	GTCTC	4 cut(s)	566, 1499, 2567, 2757
BfaI	CTAG	8 cut(s)	110, 426, 569, 1976, 2463, 2564, 2589, 2694
BfmI	CTRYAG	2 cut(s)	414, 1758
BfoI	RGCGCY	4 cut(s)	389, 662, 953, 2085
BfrI	CTTAAG	1 cut(s)	1127
BfuAI	ACCTGC	1 cut(s)	2365
BfuI	GTATCC	2 cut(s)	534, 1245
BglII	AGATCT	2 cut(s)	418, 2401
BlnI	CCTAGG	1 cut(s)	2462
BlpI	GCTNAGC	1 cut(s)	382
Bme1390I	CCNGG	4 cut(s)	1632, 2259, 2750, 2751
Bme18I	GGWCC	3 cut(s)	349, 2066, 2513
BmeT110I	CYCGRG	2 cut(s)	1046, 2749
BmgBI	CACGTC	1 cut(s)	229
BmgT120I	GGNCC	5 cut(s)	349, 964, 2066, 2261, 2513
BmiI	GGNNCC	9 cut(s)	65, 660, 741, 966, 1032, 1165, 1620, 1881, 2067
BmrFI	CCNGG	4 cut(s)	1632, 2259, 2750, 2751
BmrI	ACTGGG	2 cut(s)	813, 1169
BmsI	GCATC	9 cut(s)	1576, 1675, 1685, 1808, 1814, 2027, 2028, 2035, 2827
BmuI	ACTGGG	2 cut(s)	813, 1169
BplI	GAGNNNNNCTC	4 cut(s)	227, 259, 1979, 2011
BpmI	CTGGAG	1 cut(s)	56
Bpu10I	CCTNAGC	2 cut(s)	1577, 2085
Bpu1102I	GCTNAGC	1 cut(s)	382
BpuEI	CTTGAG	2 cut(s)	155, 2153
BpuMI	CCSGG	2 cut(s)	2750, 2751
BsaBI	GATNNNNATC	7 cut(s)	522, 918, 924, 1029, 1734, 2400, 2490
BsaHI	GRCGYC	2 cut(s)	437, 659
BsaJI	CCNNGG	9 cut(s)	752, 1630, 1724, 2191, 2258, 2462, 2649, 2749, 2750
BsaWI	WCCGGW	2 cut(s)	526, 1138
BsaXI	ACNNNNNCTCC	6 cut(s)	173, 203, 272, 302, 2481, 2511
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 79, 127, 1416, 2589
Bse118I	RCCGGY	2 cut(s)	313, 778
Bse1I	ACTGG	5 cut(s)	48, 808, 1164, 1710, 2867
Bse3DI	GCAATG	3 cut(s)	452, 1077, 1258
Bse8I	GATNNNNATC	7 cut(s)	522, 918, 924, 1029, 1734, 2400, 2490
BseAI	TCCGGA	2 cut(s)	526, 1138
BseBI	CCWGG	2 cut(s)	1632, 2259
BseDI	CCNNGG	9 cut(s)	752, 1630, 1724, 2191, 2258, 2462, 2649, 2749, 2750
BseGI	GGATG	7 cut(s)	919, 1324, 1591, 1714, 2018, 2347, 2560
BseJI	GATNNNNATC	7 cut(s)	522, 918, 924, 1029, 1734, 2400, 2490
BseLI	CCNNNNNNNGG	5 cut(s)	58, 79, 127, 1416, 2589
BseMI	GCAATG	3 cut(s)	452, 1077, 1258
BseNI	ACTGG	5 cut(s)	48, 808, 1164, 1710, 2867
BseRI	GAGGAG	4 cut(s)	158, 178, 230, 2003
BseXI	GCAGC	6 cut(s)	477, 1300, 1399, 1576, 2317, 2519
Bsh1236I	CGCG	1 cut(s)	126
BshFI	GGCC	6 cut(s)	131, 461, 965, 1700, 2263, 2467
BshNI	GGYRCC	2 cut(s)	658, 1618
BsiHKAI	GWGCWC	4 cut(s)	240, 321, 1924, 1997
BsiHKCI	CYCGRG	2 cut(s)	1046, 2749
BsiSI	CCGG	5 cut(s)	314, 527, 779, 1139, 2750
BslFI	GGGAC	1 cut(s)	1613
BslI	CCNNNNNNNGG	5 cut(s)	58, 79, 127, 1416, 2589
BsmAI	GTCTC	4 cut(s)	566, 1499, 2567, 2757
BsmBI	CGTCTC	1 cut(s)	2757
BsmFI	GGGAC	1 cut(s)	1613
BsmI	GAATGC	1 cut(s)	398
BsnI	GGCC	6 cut(s)	131, 461, 965, 1700, 2263, 2467
BsoBI	CYCGRG	2 cut(s)	1046, 2749
Bsp1286I	GDGCHC	5 cut(s)	66, 240, 321, 1924, 1997
Bsp13I	TCCGGA	2 cut(s)	526, 1138
Bsp1720I	GCTNAGC	1 cut(s)	382
Bsp19I	CCATGG	1 cut(s)	2191
BspANI	GGCC	6 cut(s)	131, 461, 965, 1700, 2263, 2467
BspEI	TCCGGA	2 cut(s)	526, 1138
BspFNI	CGCG	1 cut(s)	126
BspLI	GGNNCC	9 cut(s)	65, 660, 741, 966, 1032, 1165, 1620, 1881, 2067
BspMI	ACCTGC	1 cut(s)	2365
BspPI	GGATC	6 cut(s)	629, 914, 1025, 1038, 1130, 1358
BspQI	GCTCTTC	1 cut(s)	2247
BspT107I	GGYRCC	2 cut(s)	658, 1618
BspTI	CTTAAG	1 cut(s)	1127
BsrDI	GCAATG	3 cut(s)	452, 1077, 1258
BsrFI	RCCGGY	2 cut(s)	313, 778
BsrI	ACTGG	5 cut(s)	48, 808, 1164, 1710, 2867
BssAI	RCCGGY	2 cut(s)	313, 778
BssECI	CCNNGG	9 cut(s)	752, 1630, 1724, 2191, 2258, 2462, 2649, 2749, 2750
BssNI	GRCGYC	2 cut(s)	437, 659
BssT1I	CCWWGG	4 cut(s)	1724, 2191, 2462, 2649
Bst2UI	CCWGG	2 cut(s)	1632, 2259
Bst4CI	ACNGT	9 cut(s)	30, 415, 841, 1506, 1530, 1826, 2300, 2548, 2783
Bst6I	CTCTTC	1 cut(s)	2247
BstACI	GRCGYC	2 cut(s)	437, 659
BstAFI	CTTAAG	1 cut(s)	1127
BstDSI	CCRYGG	1 cut(s)	2191
BstENI	CCTNNNNNAGG	1 cut(s)	56
BstF5I	GGATG	7 cut(s)	919, 1324, 1591, 1714, 2018, 2347, 2560
BstFNI	CGCG	1 cut(s)	126
BstH2I	RGCGCY	4 cut(s)	389, 662, 953, 2085
BstHHI	GCGC	6 cut(s)	39, 388, 661, 952, 2084, 2842
BstMAI	GTCTC	4 cut(s)	566, 1499, 2567, 2757
BstMWI	GCNNNNNNNGC	5 cut(s)	281, 737, 855, 1963, 2419
BstNI	CCWGG	2 cut(s)	1632, 2259
BstNSI	RCATGY	2 cut(s)	211, 1182
BstSCI	CCNGG	4 cut(s)	1630, 2257, 2748, 2749
BstSFI	CTRYAG	2 cut(s)	414, 1758
BstUI	CGCG	1 cut(s)	126
BstV1I	GCAGC	6 cut(s)	477, 1300, 1399, 1576, 2317, 2519
BstX2I	RGATCY	4 cut(s)	418, 634, 1030, 2401
BstYI	RGATCY	4 cut(s)	418, 634, 1030, 2401
BsuI	GTATCC	2 cut(s)	534, 1245
BsuRI	GGCC	6 cut(s)	131, 461, 965, 1700, 2263, 2467
BtgI	CCRYGG	1 cut(s)	2191
BtrI	CACGTC	1 cut(s)	229
BtsCI	GGATG	7 cut(s)	919, 1324, 1591, 1714, 2018, 2347, 2560
BtsIMutI	CAGTG	4 cut(s)	26, 41, 411, 2553
BveI	ACCTGC	1 cut(s)	2365
CaiI	CAGNNNCTG	1 cut(s)	1412
CfoI	GCGC	6 cut(s)	39, 388, 661, 952, 2084, 2842
Cfr10I	RCCGGY	2 cut(s)	313, 778
Cfr13I	GGNCC	5 cut(s)	349, 964, 2066, 2261, 2513
Cfr9I	CCCGGG	1 cut(s)	2749
CseI	GACGC	2 cut(s)	445, 1046
Csp6I	GTAC	7 cut(s)	1195, 1488, 1931, 2102, 2498, 2544, 2697
CspCI	CAANNNNNGTGG	2 cut(s)	480, 515
CviAII	CATG	9 cut(s)	208, 1179, 1465, 1680, 1835, 2042, 2192, 2309, 2453
CviQI	GTAC	7 cut(s)	1195, 1488, 1931, 2102, 2498, 2544, 2697
DinI	GGCGCC	1 cut(s)	660
DraI	TTTAAA	2 cut(s)	1734, 1857
DraIII	CACNNNGTG	1 cut(s)	874
EaeI	YGGCCR	1 cut(s)	459
Eam1104I	CTCTTC	1 cut(s)	2247
EarI	CTCTTC	1 cut(s)	2247
EciI	GGCGGA	3 cut(s)	56, 110, 148
Ecl136II	GAGCTC	2 cut(s)	238, 1995
Eco130I	CCWWGG	4 cut(s)	1724, 2191, 2462, 2649
Eco147I	AGGCCT	1 cut(s)	2467
Eco24I	GRGCYC	3 cut(s)	66, 240, 1997
Eco47I	GGWCC	3 cut(s)	349, 2066, 2513
Eco47III	AGCGCT	3 cut(s)	387, 951, 2083
Eco53kI	GAGCTC	2 cut(s)	238, 1995
Eco57I	CTGAAG	2 cut(s)	950, 2313
Eco88I	CYCGRG	2 cut(s)	1046, 2749
EcoICRI	GAGCTC	2 cut(s)	238, 1995
EcoNI	CCTNNNNNAGG	1 cut(s)	56
EcoO109I	RGGNCCY	2 cut(s)	349, 2066
EcoRI	GAATTC	1 cut(s)	1561
EcoRII	CCWGG	2 cut(s)	1630, 2257
EcoT14I	CCWWGG	4 cut(s)	1724, 2191, 2462, 2649
EcoT22I	ATGCAT	1 cut(s)	2043
EcoT38I	GRGCYC	3 cut(s)	66, 240, 1997
EgeI	GGCGCC	1 cut(s)	660
EheI	GGCGCC	1 cut(s)	660
ErhI	CCWWGG	4 cut(s)	1724, 2191, 2462, 2649
Esp3I	CGTCTC	1 cut(s)	2757
FaeI	CATG	9 cut(s)	211, 1182, 1468, 1683, 1838, 2045, 2195, 2312, 2456
FaqI	GGGAC	1 cut(s)	1613
FatI	CATG	9 cut(s)	207, 1178, 1464, 1679, 1834, 2041, 2191, 2308, 2452
FauI	CCCGC	2 cut(s)	260, 2544
FokI	GGATG	7 cut(s)	926, 1331, 1598, 1721, 2005, 2354, 2567
FriOI	GRGCYC	3 cut(s)	66, 240, 1997
FspBI	CTAG	8 cut(s)	110, 426, 569, 1976, 2463, 2564, 2589, 2694
GlaI	GCGC	6 cut(s)	38, 387, 660, 951, 2083, 2841
GsuI	CTGGAG	1 cut(s)	56
HaeII	RGCGCY	4 cut(s)	389, 662, 953, 2085
HaeIII	GGCC	6 cut(s)	131, 461, 965, 1700, 2263, 2467
HapII	CCGG	5 cut(s)	314, 527, 779, 1139, 2750
HgaI	GACGC	2 cut(s)	445, 1046
HhaI	GCGC	6 cut(s)	39, 388, 661, 952, 2084, 2842
Hin1I	GRCGYC	2 cut(s)	437, 659
Hin1II	CATG	9 cut(s)	211, 1182, 1468, 1683, 1838, 2045, 2195, 2312, 2456
Hin6I	GCGC	6 cut(s)	37, 386, 659, 950, 2082, 2840
HinP1I	GCGC	6 cut(s)	37, 386, 659, 950, 2082, 2840
HincII	GTYRAC	1 cut(s)	1117
HindII	GTYRAC	1 cut(s)	1117
HindIII	AAGCTT	3 cut(s)	379, 878, 2411
HpaII	CCGG	5 cut(s)	314, 527, 779, 1139, 2750
Hpy166II	GTNNAC	6 cut(s)	138, 249, 1117, 1195, 1450, 2516
Hpy8I	GTNNAC	6 cut(s)	138, 249, 1117, 1195, 1450, 2516
Hpy99I	CGWCG	3 cut(s)	233, 236, 305
HpyCH4III	ACNGT	9 cut(s)	30, 415, 841, 1506, 1530, 1826, 2300, 2548, 2783
HpyCH4IV	ACGT	2 cut(s)	228, 2628
HpyCH4V	TGCA	8 cut(s)	731, 831, 946, 1149, 2041, 2291, 2456, 2507
HpyF10VI	GCNNNNNNNGC	5 cut(s)	281, 737, 855, 1963, 2419
HpySE526I	ACGT	2 cut(s)	228, 2628
Hsp92I	GRCGYC	2 cut(s)	437, 659
Hsp92II	CATG	9 cut(s)	211, 1182, 1468, 1683, 1838, 2045, 2195, 2312, 2456
HspAI	GCGC	6 cut(s)	37, 386, 659, 950, 2082, 2840
KasI	GGCGCC	1 cut(s)	658
Kpn2I	TCCGGA	2 cut(s)	526, 1138
LguI	GCTCTTC	1 cut(s)	2247
LmnI	GCTCC	5 cut(s)	69, 243, 345, 745, 1693
Lsp1109I	GCAGC	6 cut(s)	477, 1300, 1399, 1576, 2317, 2519
LweI	GCATC	9 cut(s)	1576, 1675, 1685, 1808, 1814, 2027, 2028, 2035, 2827
MaeI	CTAG	8 cut(s)	110, 426, 569, 1976, 2463, 2564, 2589, 2694
MaeII	ACGT	2 cut(s)	228, 2628
MaeIII	GTNAC	2 cut(s)	2373, 2424
MfeI	CAATTG	2 cut(s)	492, 697
MflI	RGATCY	4 cut(s)	418, 634, 1030, 2401
MhlI	GDGCHC	5 cut(s)	66, 240, 321, 1924, 1997
MlsI	TGGCCA	1 cut(s)	461
MluNI	TGGCCA	1 cut(s)	461
Mly113I	GGCGCC	1 cut(s)	659
MlyI	GAGTC	4 cut(s)	95, 299, 1058, 1350
MmeI	TCCRAC	1 cut(s)	969
Mox20I	TGGCCA	1 cut(s)	461
Mph1103I	ATGCAT	1 cut(s)	2043
MroI	TCCGGA	2 cut(s)	526, 1138
MscI	TGGCCA	1 cut(s)	461
MslI	CAYNNNNRTG	1 cut(s)	314
Msp20I	TGGCCA	1 cut(s)	461
MspA1I	CMGCKG	4 cut(s)	76, 655, 1412, 2510
MspCI	CTTAAG	1 cut(s)	1127
MspI	CCGG	5 cut(s)	314, 527, 779, 1139, 2750
MspR9I	CCNGG	4 cut(s)	1632, 2259, 2750, 2751
MunI	CAATTG	2 cut(s)	492, 697
Mva1269I	GAATGC	1 cut(s)	398
MvaI	CCWGG	2 cut(s)	1632, 2259
MvnI	CGCG	1 cut(s)	126
MwoI	GCNNNNNNNGC	5 cut(s)	281, 737, 855, 1963, 2419
NarI	GGCGCC	1 cut(s)	659
NciI	CCSGG	2 cut(s)	2750, 2751
NcoI	CCATGG	1 cut(s)	2191
NlaIII	CATG	9 cut(s)	211, 1182, 1468, 1683, 1838, 2045, 2195, 2312, 2456
NlaIV	GGNNCC	9 cut(s)	65, 660, 741, 966, 1032, 1165, 1620, 1881, 2067
NmeAIII	GCCGAG	2 cut(s)	777, 2803
NsiI	ATGCAT	1 cut(s)	2043
NspI	RCATGY	2 cut(s)	211, 1182
OliI	CACNNNNGTG	1 cut(s)	314
PaeR7I	CTCGAG	1 cut(s)	1046
PaqCI	CACCTGC	1 cut(s)	2365
PceI	AGGCCT	1 cut(s)	2467
PciI	ACATGT	2 cut(s)	207, 1178
PciSI	GCTCTTC	1 cut(s)	2247
PcsI	WCGNNNNNNNCGW	1 cut(s)	1345
PctI	GAATGC	1 cut(s)	398
PflMI	CCANNNNNTGG	1 cut(s)	79
PleI	GAGTC	4 cut(s)	94, 299, 1057, 1349
PluTI	GGCGCC	1 cut(s)	662
PpsI	GAGTC	4 cut(s)	94, 299, 1057, 1349
PpuMI	RGGWCCY	2 cut(s)	349, 2066
PscI	ACATGT	2 cut(s)	207, 1178
Psp124BI	GAGCTC	2 cut(s)	240, 1997
Psp1406I	AACGTT	1 cut(s)	2628
Psp5II	RGGWCCY	2 cut(s)	349, 2066
Psp6I	CCWGG	2 cut(s)	1630, 2257
PspGI	CCWGG	2 cut(s)	1630, 2257
PspN4I	GGNNCC	9 cut(s)	65, 660, 741, 966, 1032, 1165, 1620, 1881, 2067
PspPI	GGNCC	5 cut(s)	349, 964, 2066, 2261, 2513
PspPPI	RGGWCCY	2 cut(s)	349, 2066
PspXI	VCTCGAGB	1 cut(s)	1046
PstNI	CAGNNNCTG	1 cut(s)	1412
PsuI	RGATCY	4 cut(s)	418, 634, 1030, 2401
PvuII	CAGCTG	2 cut(s)	76, 2510
RsaI	GTAC	7 cut(s)	1196, 1489, 1932, 2103, 2499, 2545, 2698
RsaNI	GTAC	7 cut(s)	1195, 1488, 1931, 2102, 2498, 2544, 2697
RseI	CAYNNNNRTG	1 cut(s)	314
SacI	GAGCTC	2 cut(s)	240, 1997
SapI	GCTCTTC	1 cut(s)	2247
Sau96I	GGNCC	5 cut(s)	349, 964, 2066, 2261, 2513
SchI	GAGTC	4 cut(s)	95, 299, 1058, 1350
ScrFI	CCNGG	4 cut(s)	1632, 2259, 2750, 2751
SduI	GDGCHC	5 cut(s)	66, 240, 321, 1924, 1997
SfaNI	GCATC	9 cut(s)	1576, 1675, 1685, 1808, 1814, 2027, 2028, 2035, 2827
SfcI	CTRYAG	2 cut(s)	414, 1758
SfoI	GGCGCC	1 cut(s)	660
Sfr274I	CTCGAG	1 cut(s)	1046
SgrAI	CRCCGGYG	1 cut(s)	313
SinI	GGWCC	3 cut(s)	349, 2066, 2513
SlaI	CTCGAG	1 cut(s)	1046
SmaI	CCCGGG	1 cut(s)	2751
SmiI	ATTTAAAT	1 cut(s)	1734
SmiMI	CAYNNNNRTG	1 cut(s)	314
SmlI	CTYRAG	4 cut(s)	170, 1046, 1127, 2132
SmoI	CTYRAG	4 cut(s)	170, 1046, 1127, 2132
SseBI	AGGCCT	1 cut(s)	2467
SspDI	GGCGCC	1 cut(s)	658
SspI	AATATT	1 cut(s)	1039
SspMI	CTAG	8 cut(s)	110, 426, 569, 1976, 2463, 2564, 2589, 2694
SstI	GAGCTC	2 cut(s)	240, 1997
StuI	AGGCCT	1 cut(s)	2467
StyD4I	CCNGG	4 cut(s)	1630, 2257, 2748, 2749
StyI	CCWWGG	4 cut(s)	1724, 2191, 2462, 2649
SwaI	ATTTAAAT	1 cut(s)	1734
TaaI	ACNGT	9 cut(s)	30, 415, 841, 1506, 1530, 1826, 2300, 2548, 2783
TaiI	ACGT	2 cut(s)	231, 2631
TaqI	TCGA	6 cut(s)	234, 300, 372, 1047, 1175, 1339
TatI	WGTACW	1 cut(s)	1930
TauI	GCSGC	5 cut(s)	126, 164, 221, 287, 1412
TscAI	CASTG	4 cut(s)	33, 48, 418, 2553
TseI	GCWGC	6 cut(s)	465, 1288, 1412, 1589, 2305, 2507
TspDTI	ATGAA	9 cut(s)	879, 1725, 1803, 1851, 1930, 2163, 2172, 2286, 2412
TspGWI	ACGGA	1 cut(s)	2018
TspMI	CCCGGG	1 cut(s)	2749
TspRI	CASTG	4 cut(s)	33, 48, 418, 2553
Van91I	CCANNNNNTGG	1 cut(s)	79
Vha464I	CTTAAG	1 cut(s)	1127
VpaK11BI	GGWCC	3 cut(s)	349, 2066, 2513
XagI	CCTNNNNNAGG	1 cut(s)	56
XapI	RAATTY	4 cut(s)	1098, 1561, 2179, 2656
XbaI	TCTAGA	1 cut(s)	568
XceI	RCATGY	2 cut(s)	211, 1182
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2656
XhoI	CTCGAG	1 cut(s)	1046
XmaI	CCCGGG	1 cut(s)	2749
XmaJI	CCTAGG	1 cut(s)	2462
XspI	CTAG	8 cut(s)	110, 426, 569, 1976, 2463, 2564, 2589, 2694
Zsp2I	ATGCAT	1 cut(s)	2043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.