Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48760 AT1G48760 AT1G48760 |
| fragaria_vesca | FvH4_5g11850 |
| malus_domestica | MD06G1218100.v1.1 MD14G1228200.v1.1 |
| prunus_persica | Prupe.5G223200_v2.0.a1 |
| pyrus_communis | pycom06g19420 pycom14g18960 |
| rosa_chinensis | RchiOBHm_Chr7g0185741 |
| rosa_laevigata | RLG00000004886 |
| rosa_multiflora | Rmu_sc0002121.1_g000007 Rmu_sc0002952.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00268650 |
| rosa_rugosa | Rorug06G0471100 |
| rosa_samantha | Rh7AG071300 Rh7BG076600 Rh7CG076600 Rh7DG076400 |
| rosa_wichuraiana | Rw7G006380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2158 |
| Acc36I | ACCTGC | 1 cut(s) | 2158 |
| AccB1I | GGYRCC | 2 cut(s) | 451, 1411 |
| AccII | CGCG | 1 cut(s) | 665 |
| AccIII | TCCGGA | 2 cut(s) | 319, 931 |
| AciI | CCGC | 9 cut(s) | 12, 46, 78, 136, 446, 665, 776, 1203, 2344 |
| AclI | AACGTT | 1 cut(s) | 2421 |
| AclWI | GGATC | 5 cut(s) | 422, 707, 818, 923, 1151 |
| AcsI | RAATTY | 3 cut(s) | 1354, 1972, 2449 |
| AcuI | CTGAAG | 1 cut(s) | 2106 |
| AcyI | GRCGYC | 2 cut(s) | 230, 452 |
| AdeI | CACNNNGTG | 1 cut(s) | 667 |
| AfaI | GTAC | 6 cut(s) | 1282, 1725, 1896, 2292, 2338, 2491 |
| AfeI | AGCGCT | 3 cut(s) | 180, 744, 1876 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1209, 2382 |
| AflII | CTTAAG | 2 cut(s) | 722, 920 |
| AflIII | ACRYGT | 1 cut(s) | 971 |
| AjiI | CACGTC | 1 cut(s) | 22 |
| AjnI | CCWGG | 2 cut(s) | 1423, 2050 |
| AleI | CACNNNNGTG | 1 cut(s) | 107 |
| Alw21I | GWGCWC | 4 cut(s) | 33, 114, 1717, 1790 |
| Alw26I | GTCTC | 4 cut(s) | 359, 1292, 2360, 2550 |
| AlwI | GGATC | 5 cut(s) | 422, 707, 818, 923, 1151 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1205 |
| Ama87I | CYCGRG | 2 cut(s) | 455, 2542 |
| Aor13HI | TCCGGA | 2 cut(s) | 319, 931 |
| Aor51HI | AGCGCT | 3 cut(s) | 180, 744, 1876 |
| AoxI | GGCC | 4 cut(s) | 756, 1491, 2054, 2258 |
| ApeKI | GCWGC | 5 cut(s) | 258, 1081, 1205, 2098, 2300 |
| ApoI | RAATTY | 3 cut(s) | 1354, 1972, 2449 |
| AspA2I | CCTAGG | 1 cut(s) | 2255 |
| AspLEI | GCGC | 5 cut(s) | 181, 454, 745, 1877, 2635 |
| AspS9I | GGNCC | 5 cut(s) | 142, 757, 1859, 2054, 2306 |
| AsuC2I | CCSGG | 2 cut(s) | 2543, 2544 |
| AsuHPI | GGTGA | 8 cut(s) | 115, 139, 649, 679, 1961, 2150, 2281, 2468 |
| AsuNHI | GCTAGC | 1 cut(s) | 254 |
| AvaI | CYCGRG | 2 cut(s) | 455, 2542 |
| AvaII | GGWCC | 3 cut(s) | 142, 1859, 2306 |
| AvrII | CCTAGG | 1 cut(s) | 2255 |
| BanI | GGYRCC | 2 cut(s) | 451, 1411 |
| BanII | GRGCYC | 2 cut(s) | 33, 1790 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 53, 85, 1254, 1286 |
| Bbv12I | GWGCWC | 4 cut(s) | 33, 114, 1717, 1790 |
| BbvCI | CCTCAGC | 1 cut(s) | 1370 |
| BbvI | GCAGC | 5 cut(s) | 270, 1093, 1192, 2110, 2312 |
| BccI | CCATC | 5 cut(s) | 1496, 1895, 2065, 2129, 2273 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 250, 284, 2597, 2631 |
| BciT130I | CCWGG | 2 cut(s) | 1425, 2052 |
| BciVI | GTATCC | 2 cut(s) | 327, 1038 |
| BclI | TGATCA | 1 cut(s) | 1402 |
| BcnI | CCSGG | 2 cut(s) | 2543, 2544 |
| BcoDI | GTCTC | 4 cut(s) | 359, 1292, 2360, 2550 |
| BfaI | CTAG | 8 cut(s) | 176, 219, 255, 362, 1769, 2256, 2357, 2382 |
| BfmI | CTRYAG | 2 cut(s) | 207, 1551 |
| BfoI | RGCGCY | 4 cut(s) | 182, 455, 746, 1878 |
| BfrI | CTTAAG | 2 cut(s) | 722, 920 |
| BfuAI | ACCTGC | 1 cut(s) | 2158 |
| BfuI | GTATCC | 2 cut(s) | 327, 1038 |
| BglII | AGATCT | 2 cut(s) | 211, 2194 |
| BisI | GCNGC | 8 cut(s) | 12, 78, 259, 1082, 1203, 1206, 2099, 2301 |
| BlnI | CCTAGG | 1 cut(s) | 2255 |
| BlsI | GCNGC | 8 cut(s) | 13, 79, 260, 1083, 1204, 1207, 2100, 2302 |
| Bme1390I | CCNGG | 4 cut(s) | 1425, 2052, 2543, 2544 |
| Bme18I | GGWCC | 3 cut(s) | 142, 1859, 2306 |
| BmeT110I | CYCGRG | 2 cut(s) | 455, 2542 |
| BmgBI | CACGTC | 1 cut(s) | 22 |
| BmgT120I | GGNCC | 5 cut(s) | 142, 757, 1859, 2054, 2306 |
| BmiI | GGNNCC | 7 cut(s) | 453, 534, 759, 958, 1413, 1674, 1860 |
| BmrFI | CCNGG | 4 cut(s) | 1425, 2052, 2543, 2544 |
| BmrI | ACTGGG | 2 cut(s) | 606, 962 |
| BmsI | GCATC | 8 cut(s) | 1468, 1478, 1601, 1607, 1820, 1821, 1828, 2620 |
| BmtI | GCTAGC | 1 cut(s) | 258 |
| BmuI | ACTGGG | 2 cut(s) | 606, 962 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1772, 1804 |
| BpmI | CTGGAG | 1 cut(s) | 860 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1370, 1878 |
| BpuEI | CTTGAG | 2 cut(s) | 1946, 2506 |
| BpuMI | CCSGG | 2 cut(s) | 2543, 2544 |
| BsaBI | GATNNNNATC | 7 cut(s) | 315, 711, 717, 822, 1527, 2193, 2283 |
| BsaHI | GRCGYC | 2 cut(s) | 230, 452 |
| BsaJI | CCNNGG | 9 cut(s) | 545, 1423, 1517, 1984, 2051, 2255, 2442, 2542, 2543 |
| BsaWI | WCCGGW | 3 cut(s) | 319, 931, 1120 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 65, 95, 2274, 2304 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1209, 2382 |
| Bse118I | RCCGGY | 2 cut(s) | 106, 571 |
| Bse1I | ACTGG | 4 cut(s) | 601, 957, 1503, 2660 |
| Bse3DI | GCAATG | 3 cut(s) | 245, 870, 1051 |
| Bse8I | GATNNNNATC | 7 cut(s) | 315, 711, 717, 822, 1527, 2193, 2283 |
| BseAI | TCCGGA | 2 cut(s) | 319, 931 |
| BseBI | CCWGG | 2 cut(s) | 1425, 2052 |
| BseDI | CCNNGG | 9 cut(s) | 545, 1423, 1517, 1984, 2051, 2255, 2442, 2542, 2543 |
| BseGI | GGATG | 6 cut(s) | 712, 1117, 1507, 1811, 2140, 2353 |
| BseJI | GATNNNNATC | 7 cut(s) | 315, 711, 717, 822, 1527, 2193, 2283 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1209, 2382 |
| BseMI | GCAATG | 3 cut(s) | 245, 870, 1051 |
| BseNI | ACTGG | 4 cut(s) | 601, 957, 1503, 2660 |
| BseRI | GAGGAG | 2 cut(s) | 1381, 1796 |
| BseXI | GCAGC | 5 cut(s) | 270, 1093, 1192, 2110, 2312 |
| Bsh1236I | CGCG | 1 cut(s) | 665 |
| BshFI | GGCC | 4 cut(s) | 758, 1493, 2056, 2260 |
| BshNI | GGYRCC | 2 cut(s) | 451, 1411 |
| BsiHKAI | GWGCWC | 4 cut(s) | 33, 114, 1717, 1790 |
| BsiHKCI | CYCGRG | 2 cut(s) | 455, 2542 |
| BsiSI | CCGG | 7 cut(s) | 107, 320, 572, 932, 1121, 1160, 2543 |
| BslFI | GGGAC | 2 cut(s) | 607, 1406 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1209, 2382 |
| BsmAI | GTCTC | 4 cut(s) | 359, 1292, 2360, 2550 |
| BsmBI | CGTCTC | 1 cut(s) | 2550 |
| BsmFI | GGGAC | 2 cut(s) | 607, 1406 |
| BsmI | GAATGC | 2 cut(s) | 191, 1384 |
| BsnI | GGCC | 4 cut(s) | 758, 1493, 2056, 2260 |
| BsoBI | CYCGRG | 2 cut(s) | 455, 2542 |
| Bsp1286I | GDGCHC | 4 cut(s) | 33, 114, 1717, 1790 |
| Bsp13I | TCCGGA | 2 cut(s) | 319, 931 |
| Bsp19I | CCATGG | 1 cut(s) | 1984 |
| BspACI | CCGC | 9 cut(s) | 12, 46, 78, 136, 446, 665, 776, 1203, 2344 |
| BspANI | GGCC | 4 cut(s) | 758, 1493, 2056, 2260 |
| BspEI | TCCGGA | 2 cut(s) | 319, 931 |
| BspFNI | CGCG | 1 cut(s) | 665 |
| BspLI | GGNNCC | 7 cut(s) | 453, 534, 759, 958, 1413, 1674, 1860 |
| BspMI | ACCTGC | 1 cut(s) | 2158 |
| BspOI | GCTAGC | 1 cut(s) | 258 |
| BspPI | GGATC | 5 cut(s) | 422, 707, 818, 923, 1151 |
| BspQI | GCTCTTC | 1 cut(s) | 2040 |
| BspT107I | GGYRCC | 2 cut(s) | 451, 1411 |
| BspTI | CTTAAG | 2 cut(s) | 722, 920 |
| BsrDI | GCAATG | 3 cut(s) | 245, 870, 1051 |
| BsrFI | RCCGGY | 2 cut(s) | 106, 571 |
| BsrI | ACTGG | 4 cut(s) | 601, 957, 1503, 2660 |
| BssAI | RCCGGY | 2 cut(s) | 106, 571 |
| BssECI | CCNNGG | 9 cut(s) | 545, 1423, 1517, 1984, 2051, 2255, 2442, 2542, 2543 |
| BssNI | GRCGYC | 2 cut(s) | 230, 452 |
| BssT1I | CCWWGG | 4 cut(s) | 1517, 1984, 2255, 2442 |
| Bst2UI | CCWGG | 2 cut(s) | 1425, 2052 |
| Bst4CI | ACNGT | 8 cut(s) | 208, 634, 1299, 1323, 1619, 2093, 2341, 2576 |
| Bst6I | CTCTTC | 1 cut(s) | 2040 |
| BstACI | GRCGYC | 2 cut(s) | 230, 452 |
| BstAFI | CTTAAG | 2 cut(s) | 722, 920 |
| BstC8I | GCNNGC | 9 cut(s) | 252, 256, 417, 450, 675, 741, 1590, 2082, 2504 |
| BstDSI | CCRYGG | 1 cut(s) | 1984 |
| BstF5I | GGATG | 6 cut(s) | 712, 1117, 1507, 1811, 2140, 2353 |
| BstFNI | CGCG | 1 cut(s) | 665 |
| BstH2I | RGCGCY | 4 cut(s) | 182, 455, 746, 1878 |
| BstHHI | GCGC | 5 cut(s) | 181, 454, 745, 1877, 2635 |
| BstMAI | GTCTC | 4 cut(s) | 359, 1292, 2360, 2550 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 74, 530, 1756, 2212 |
| BstNI | CCWGG | 2 cut(s) | 1425, 2052 |
| BstNSI | RCATGY | 1 cut(s) | 975 |
| BstSCI | CCNGG | 4 cut(s) | 1423, 2050, 2541, 2542 |
| BstSFI | CTRYAG | 2 cut(s) | 207, 1551 |
| BstUI | CGCG | 1 cut(s) | 665 |
| BstV1I | GCAGC | 5 cut(s) | 270, 1093, 1192, 2110, 2312 |
| BstX2I | RGATCY | 3 cut(s) | 211, 427, 2194 |
| BstYI | RGATCY | 3 cut(s) | 211, 427, 2194 |
| BsuI | GTATCC | 2 cut(s) | 327, 1038 |
| BsuRI | GGCC | 4 cut(s) | 758, 1493, 2056, 2260 |
| BtgI | CCRYGG | 1 cut(s) | 1984 |
| BtrI | CACGTC | 1 cut(s) | 22 |
| BtsCI | GGATG | 6 cut(s) | 712, 1117, 1507, 1811, 2140, 2353 |
| BtsIMutI | CAGTG | 2 cut(s) | 204, 2346 |
| BveI | ACCTGC | 1 cut(s) | 2158 |
| Cac8I | GCNNGC | 9 cut(s) | 252, 256, 417, 450, 675, 741, 1590, 2082, 2504 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1205 |
| CfoI | GCGC | 5 cut(s) | 181, 454, 745, 1877, 2635 |
| Cfr10I | RCCGGY | 2 cut(s) | 106, 571 |
| Cfr13I | GGNCC | 5 cut(s) | 142, 757, 1859, 2054, 2306 |
| Cfr9I | CCCGGG | 1 cut(s) | 2542 |
| CseI | GACGC | 2 cut(s) | 238, 839 |
| Csp6I | GTAC | 6 cut(s) | 1281, 1724, 1895, 2291, 2337, 2490 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 273, 308 |
| CviQI | GTAC | 6 cut(s) | 1281, 1724, 1895, 2291, 2337, 2490 |
| DinI | GGCGCC | 1 cut(s) | 453 |
| DraI | TTTAAA | 3 cut(s) | 1333, 1527, 1650 |
| DraIII | CACNNNGTG | 1 cut(s) | 667 |
| Eam1104I | CTCTTC | 1 cut(s) | 2040 |
| EarI | CTCTTC | 1 cut(s) | 2040 |
| Ecl136II | GAGCTC | 2 cut(s) | 31, 1788 |
| Eco130I | CCWWGG | 4 cut(s) | 1517, 1984, 2255, 2442 |
| Eco147I | AGGCCT | 1 cut(s) | 2260 |
| Eco24I | GRGCYC | 2 cut(s) | 33, 1790 |
| Eco47I | GGWCC | 3 cut(s) | 142, 1859, 2306 |
| Eco47III | AGCGCT | 3 cut(s) | 180, 744, 1876 |
| Eco53kI | GAGCTC | 2 cut(s) | 31, 1788 |
| Eco57I | CTGAAG | 1 cut(s) | 2106 |
| Eco88I | CYCGRG | 2 cut(s) | 455, 2542 |
| EcoICRI | GAGCTC | 2 cut(s) | 31, 1788 |
| EcoO109I | RGGNCCY | 2 cut(s) | 142, 1859 |
| EcoRI | GAATTC | 1 cut(s) | 1354 |
| EcoRII | CCWGG | 2 cut(s) | 1423, 2050 |
| EcoT14I | CCWWGG | 4 cut(s) | 1517, 1984, 2255, 2442 |
| EcoT22I | ATGCAT | 1 cut(s) | 1836 |
| EcoT38I | GRGCYC | 2 cut(s) | 33, 1790 |
| EgeI | GGCGCC | 1 cut(s) | 453 |
| EheI | GGCGCC | 1 cut(s) | 453 |
| ErhI | CCWWGG | 4 cut(s) | 1517, 1984, 2255, 2442 |
| Esp3I | CGTCTC | 1 cut(s) | 2550 |
| FaqI | GGGAC | 2 cut(s) | 607, 1406 |
| FauI | CCCGC | 2 cut(s) | 53, 2337 |
| FbaI | TGATCA | 1 cut(s) | 1402 |
| Fnu4HI | GCNGC | 8 cut(s) | 12, 78, 259, 1082, 1203, 1206, 2099, 2301 |
| FokI | GGATG | 6 cut(s) | 719, 1124, 1514, 1798, 2147, 2360 |
| FriOI | GRGCYC | 2 cut(s) | 33, 1790 |
| Fsp4HI | GCNGC | 8 cut(s) | 12, 78, 259, 1082, 1203, 1206, 2099, 2301 |
| FspBI | CTAG | 8 cut(s) | 176, 219, 255, 362, 1769, 2256, 2357, 2382 |
| GlaI | GCGC | 5 cut(s) | 180, 453, 744, 1876, 2634 |
| GluI | GCNGC | 8 cut(s) | 12, 78, 259, 1082, 1203, 1206, 2099, 2301 |
| GsuI | CTGGAG | 1 cut(s) | 860 |
| HaeII | RGCGCY | 4 cut(s) | 182, 455, 746, 1878 |
| HaeIII | GGCC | 4 cut(s) | 758, 1493, 2056, 2260 |
| HapII | CCGG | 7 cut(s) | 107, 320, 572, 932, 1121, 1160, 2543 |
| HgaI | GACGC | 2 cut(s) | 238, 839 |
| HhaI | GCGC | 5 cut(s) | 181, 454, 745, 1877, 2635 |
| Hin1I | GRCGYC | 2 cut(s) | 230, 452 |
| Hin6I | GCGC | 5 cut(s) | 179, 452, 743, 1875, 2633 |
| HinP1I | GCGC | 5 cut(s) | 179, 452, 743, 1875, 2633 |
| HincII | GTYRAC | 1 cut(s) | 910 |
| HindII | GTYRAC | 1 cut(s) | 910 |
| HindIII | AAGCTT | 2 cut(s) | 671, 2204 |
| HpaII | CCGG | 7 cut(s) | 107, 320, 572, 932, 1121, 1160, 2543 |
| HphI | GGTGA | 8 cut(s) | 115, 139, 649, 679, 1961, 2150, 2281, 2468 |
| Hpy166II | GTNNAC | 3 cut(s) | 910, 1243, 2309 |
| Hpy8I | GTNNAC | 3 cut(s) | 910, 1243, 2309 |
| Hpy99I | CGWCG | 3 cut(s) | 26, 29, 98 |
| HpyCH4III | ACNGT | 8 cut(s) | 208, 634, 1299, 1323, 1619, 2093, 2341, 2576 |
| HpyCH4IV | ACGT | 2 cut(s) | 21, 2421 |
| HpyCH4V | TGCA | 8 cut(s) | 524, 624, 739, 942, 1834, 2084, 2249, 2300 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 74, 530, 1756, 2212 |
| HpySE526I | ACGT | 2 cut(s) | 21, 2421 |
| Hsp92I | GRCGYC | 2 cut(s) | 230, 452 |
| HspAI | GCGC | 5 cut(s) | 179, 452, 743, 1875, 2633 |
| KasI | GGCGCC | 1 cut(s) | 451 |
| Kpn2I | TCCGGA | 2 cut(s) | 319, 931 |
| Ksp22I | TGATCA | 1 cut(s) | 1402 |
| LguI | GCTCTTC | 1 cut(s) | 2040 |
| LmnI | GCTCC | 5 cut(s) | 36, 138, 538, 1123, 1486 |
| Lsp1109I | GCAGC | 5 cut(s) | 270, 1093, 1192, 2110, 2312 |
| LweI | GCATC | 8 cut(s) | 1468, 1478, 1601, 1607, 1820, 1821, 1828, 2620 |
| MaeI | CTAG | 8 cut(s) | 176, 219, 255, 362, 1769, 2256, 2357, 2382 |
| MaeII | ACGT | 2 cut(s) | 21, 2421 |
| MaeIII | GTNAC | 2 cut(s) | 2166, 2217 |
| MfeI | CAATTG | 3 cut(s) | 285, 490, 1406 |
| MflI | RGATCY | 3 cut(s) | 211, 427, 2194 |
| MhlI | GDGCHC | 4 cut(s) | 33, 114, 1717, 1790 |
| Mly113I | GGCGCC | 1 cut(s) | 452 |
| MlyI | GAGTC | 3 cut(s) | 92, 851, 1143 |
| MmeI | TCCRAC | 1 cut(s) | 762 |
| Mph1103I | ATGCAT | 1 cut(s) | 1836 |
| MroI | TCCGGA | 2 cut(s) | 319, 931 |
| MslI | CAYNNNNRTG | 2 cut(s) | 107, 863 |
| MspA1I | CMGCKG | 3 cut(s) | 448, 1205, 2303 |
| MspCI | CTTAAG | 2 cut(s) | 722, 920 |
| MspI | CCGG | 7 cut(s) | 107, 320, 572, 932, 1121, 1160, 2543 |
| MspR9I | CCNGG | 4 cut(s) | 1425, 2052, 2543, 2544 |
| MunI | CAATTG | 3 cut(s) | 285, 490, 1406 |
| Mva1269I | GAATGC | 2 cut(s) | 191, 1384 |
| MvaI | CCWGG | 2 cut(s) | 1425, 2052 |
| MvnI | CGCG | 1 cut(s) | 665 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 74, 530, 1756, 2212 |
| NarI | GGCGCC | 1 cut(s) | 452 |
| NciI | CCSGG | 2 cut(s) | 2543, 2544 |
| NcoI | CCATGG | 1 cut(s) | 1984 |
| NheI | GCTAGC | 1 cut(s) | 254 |
| NlaIV | GGNNCC | 7 cut(s) | 453, 534, 759, 958, 1413, 1674, 1860 |
| NmeAIII | GCCGAG | 2 cut(s) | 570, 2596 |
| NsiI | ATGCAT | 1 cut(s) | 1836 |
| NspI | RCATGY | 1 cut(s) | 975 |
| OliI | CACNNNNGTG | 1 cut(s) | 107 |
| PaqCI | CACCTGC | 1 cut(s) | 2158 |
| PceI | AGGCCT | 1 cut(s) | 2260 |
| PciI | ACATGT | 1 cut(s) | 971 |
| PciSI | GCTCTTC | 1 cut(s) | 2040 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1138 |
| PctI | GAATGC | 2 cut(s) | 191, 1384 |
| PkrI | GCNGC | 8 cut(s) | 13, 79, 260, 1083, 1204, 1207, 2100, 2302 |
| PleI | GAGTC | 3 cut(s) | 92, 850, 1142 |
| PluTI | GGCGCC | 1 cut(s) | 455 |
| PpsI | GAGTC | 3 cut(s) | 92, 850, 1142 |
| PpuMI | RGGWCCY | 2 cut(s) | 142, 1859 |
| PscI | ACATGT | 1 cut(s) | 971 |
| Psp124BI | GAGCTC | 2 cut(s) | 33, 1790 |
| Psp1406I | AACGTT | 1 cut(s) | 2421 |
| Psp5II | RGGWCCY | 2 cut(s) | 142, 1859 |
| Psp6I | CCWGG | 2 cut(s) | 1423, 2050 |
| PspGI | CCWGG | 2 cut(s) | 1423, 2050 |
| PspN4I | GGNNCC | 7 cut(s) | 453, 534, 759, 958, 1413, 1674, 1860 |
| PspPI | GGNCC | 5 cut(s) | 142, 757, 1859, 2054, 2306 |
| PspPPI | RGGWCCY | 2 cut(s) | 142, 1859 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1205 |
| PsuI | RGATCY | 3 cut(s) | 211, 427, 2194 |
| PvuII | CAGCTG | 1 cut(s) | 2303 |
| RsaI | GTAC | 6 cut(s) | 1282, 1725, 1896, 2292, 2338, 2491 |
| RsaNI | GTAC | 6 cut(s) | 1281, 1724, 1895, 2291, 2337, 2490 |
| RseI | CAYNNNNRTG | 2 cut(s) | 107, 863 |
| SacI | GAGCTC | 2 cut(s) | 33, 1790 |
| SapI | GCTCTTC | 1 cut(s) | 2040 |
| SatI | GCNGC | 8 cut(s) | 12, 78, 259, 1082, 1203, 1206, 2099, 2301 |
| Sau96I | GGNCC | 5 cut(s) | 142, 757, 1859, 2054, 2306 |
| SchI | GAGTC | 3 cut(s) | 92, 851, 1143 |
| ScrFI | CCNGG | 4 cut(s) | 1425, 2052, 2543, 2544 |
| SduI | GDGCHC | 4 cut(s) | 33, 114, 1717, 1790 |
| SfaNI | GCATC | 8 cut(s) | 1468, 1478, 1601, 1607, 1820, 1821, 1828, 2620 |
| SfcI | CTRYAG | 2 cut(s) | 207, 1551 |
| SfoI | GGCGCC | 1 cut(s) | 453 |
| SgrAI | CRCCGGYG | 1 cut(s) | 106 |
| SinI | GGWCC | 3 cut(s) | 142, 1859, 2306 |
| SmaI | CCCGGG | 1 cut(s) | 2544 |
| SmiI | ATTTAAAT | 1 cut(s) | 1527 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 107, 863 |
| SmlI | CTYRAG | 4 cut(s) | 722, 920, 1925, 2485 |
| SmoI | CTYRAG | 4 cut(s) | 722, 920, 1925, 2485 |
| SseBI | AGGCCT | 1 cut(s) | 2260 |
| SsiI | CCGC | 9 cut(s) | 12, 46, 78, 136, 446, 665, 776, 1203, 2344 |
| SspDI | GGCGCC | 1 cut(s) | 451 |
| SspI | AATATT | 1 cut(s) | 832 |
| SspMI | CTAG | 8 cut(s) | 176, 219, 255, 362, 1769, 2256, 2357, 2382 |
| SstI | GAGCTC | 2 cut(s) | 33, 1790 |
| StuI | AGGCCT | 1 cut(s) | 2260 |
| StyD4I | CCNGG | 4 cut(s) | 1423, 2050, 2541, 2542 |
| StyI | CCWWGG | 4 cut(s) | 1517, 1984, 2255, 2442 |
| SwaI | ATTTAAAT | 1 cut(s) | 1527 |
| TaaI | ACNGT | 8 cut(s) | 208, 634, 1299, 1323, 1619, 2093, 2341, 2576 |
| TaiI | ACGT | 2 cut(s) | 24, 2424 |
| TaqI | TCGA | 5 cut(s) | 27, 93, 165, 968, 1132 |
| TatI | WGTACW | 1 cut(s) | 1723 |
| TauI | GCSGC | 3 cut(s) | 14, 80, 1205 |
| TscAI | CASTG | 2 cut(s) | 211, 2346 |
| TseI | GCWGC | 5 cut(s) | 258, 1081, 1205, 2098, 2300 |
| TspDTI | ATGAA | 9 cut(s) | 672, 1291, 1596, 1644, 1723, 1956, 1965, 2079, 2205 |
| TspGWI | ACGGA | 2 cut(s) | 316, 1811 |
| TspMI | CCCGGG | 1 cut(s) | 2542 |
| TspRI | CASTG | 2 cut(s) | 211, 2346 |
| Vha464I | CTTAAG | 2 cut(s) | 722, 920 |
| VpaK11BI | GGWCC | 3 cut(s) | 142, 1859, 2306 |
| XapI | RAATTY | 3 cut(s) | 1354, 1972, 2449 |
| XbaI | TCTAGA | 1 cut(s) | 361 |
| XceI | RCATGY | 1 cut(s) | 975 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2449 |
| XmaI | CCCGGG | 1 cut(s) | 2542 |
| XmaJI | CCTAGG | 1 cut(s) | 2255 |
| XspI | CTAG | 8 cut(s) | 176, 219, 255, 362, 1769, 2256, 2357, 2382 |
| Zsp2I | ATGCAT | 1 cut(s) | 1836 |