Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48760 AT1G48760 AT1G48760 |
| fragaria_vesca | FvH4_5g11850 |
| malus_domestica | MD06G1218100.v1.1 MD14G1228200.v1.1 |
| prunus_persica | Prupe.5G223200_v2.0.a1 |
| pyrus_communis | pycom06g19420 pycom14g18960 |
| rosa_chinensis | RchiOBHm_Chr7g0185741 |
| rosa_laevigata | RLG00000004886 |
| rosa_multiflora | Rmu_sc0002121.1_g000007 Rmu_sc0002952.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00268650 |
| rosa_rugosa | Rorug06G0471100 |
| rosa_samantha | Rh7AG071300 Rh7BG076600 Rh7CG076600 Rh7DG076400 |
| rosa_wichuraiana | Rw7G006380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 672 |
| AarI | CACCTGC | 1 cut(s) | 2365 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 314 |
| Acc36I | ACCTGC | 1 cut(s) | 2365 |
| Acc65I | GGTACC | 1 cut(s) | 2546 |
| AccB1I | GGYRCC | 3 cut(s) | 658, 1618, 2546 |
| AccBSI | CCGCTC | 2 cut(s) | 1517, 2858 |
| AccII | CGCG | 2 cut(s) | 126, 900 |
| AclWI | GGATC | 8 cut(s) | 670, 914, 1025, 1038, 1130, 1246, 1259, 1358 |
| AcsI | RAATTY | 4 cut(s) | 565, 894, 1098, 2179 |
| AcuI | CTGAAG | 1 cut(s) | 2546 |
| AcyI | GRCGYC | 1 cut(s) | 659 |
| AfaI | GTAC | 5 cut(s) | 1489, 1527, 2103, 2548, 2827 |
| AfeI | AGCGCT | 1 cut(s) | 387 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1270, 1889 |
| AflII | CTTAAG | 1 cut(s) | 929 |
| AflIII | ACRYGT | 1 cut(s) | 207 |
| AgeI | ACCGGT | 1 cut(s) | 2890 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 128 |
| AjiI | CACGTC | 1 cut(s) | 229 |
| AjnI | CCWGG | 2 cut(s) | 678, 1630 |
| Alw21I | GWGCWC | 4 cut(s) | 240, 1924, 2086, 2298 |
| Alw26I | GTCTC | 3 cut(s) | 2025, 2077, 2550 |
| AlwI | GGATC | 8 cut(s) | 670, 914, 1025, 1038, 1130, 1246, 1259, 1358 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 533 |
| Ama87I | CYCGRG | 2 cut(s) | 1723, 2764 |
| Aor51HI | AGCGCT | 1 cut(s) | 387 |
| AoxI | GGCC | 5 cut(s) | 61, 738, 807, 1654, 2468 |
| ApeKI | GCWGC | 6 cut(s) | 1182, 1409, 1412, 1589, 2305, 2809 |
| ApoI | RAATTY | 4 cut(s) | 565, 894, 1098, 2179 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 197, 229 |
| AsiGI | ACCGGT | 1 cut(s) | 2890 |
| AsiSI | GCGATCGC | 1 cut(s) | 495 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2094 |
| Asp718I | GGTACC | 1 cut(s) | 2546 |
| AspA2I | CCTAGG | 1 cut(s) | 752 |
| AspLEI | GCGC | 3 cut(s) | 39, 388, 661 |
| AspS9I | GGNCC | 7 cut(s) | 49, 349, 739, 801, 807, 1655, 2066 |
| AsuC2I | CCSGG | 3 cut(s) | 805, 2765, 2766 |
| AsuHPI | GGTGA | 9 cut(s) | 169, 322, 346, 442, 856, 1494, 1933, 2168, 2491 |
| AvaI | CYCGRG | 2 cut(s) | 1723, 2764 |
| AvaII | GGWCC | 4 cut(s) | 49, 349, 801, 2066 |
| AvrII | CCTAGG | 1 cut(s) | 752 |
| BamHI | GGATCC | 2 cut(s) | 1030, 1251 |
| BanI | GGYRCC | 3 cut(s) | 658, 1618, 2546 |
| BanII | GRGCYC | 2 cut(s) | 240, 2014 |
| BbsI | GAAGAC | 3 cut(s) | 1803, 2142, 2758 |
| Bbv12I | GWGCWC | 4 cut(s) | 240, 1924, 2086, 2298 |
| BbvI | GCAGC | 6 cut(s) | 1169, 1396, 1399, 1576, 2317, 2821 |
| BccI | CCATC | 5 cut(s) | 1513, 1646, 2102, 2272, 2483 |
| BceAI | ACGGC | 1 cut(s) | 482 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 481, 515, 1788, 1822, 2828, 2862 |
| BciT130I | CCWGG | 2 cut(s) | 680, 1632 |
| BclI | TGATCA | 1 cut(s) | 2695 |
| BcnI | CCSGG | 3 cut(s) | 805, 2765, 2766 |
| BcoDI | GTCTC | 3 cut(s) | 2025, 2077, 2550 |
| BfaI | CTAG | 8 cut(s) | 402, 426, 753, 908, 1668, 1913, 2063, 2408 |
| BfmI | CTRYAG | 4 cut(s) | 414, 870, 1183, 1758 |
| BfoI | RGCGCY | 2 cut(s) | 389, 662 |
| BfrI | CTTAAG | 1 cut(s) | 929 |
| BfuAI | ACCTGC | 1 cut(s) | 2365 |
| BglII | AGATCT | 3 cut(s) | 418, 1960, 2404 |
| BisI | GCNGC | 9 cut(s) | 219, 285, 288, 1183, 1410, 1413, 1590, 2306, 2810 |
| BlnI | CCTAGG | 1 cut(s) | 752 |
| BlpI | GCTNAGC | 1 cut(s) | 382 |
| BlsI | GCNGC | 9 cut(s) | 220, 286, 289, 1184, 1411, 1414, 1591, 2307, 2811 |
| Bme1390I | CCNGG | 5 cut(s) | 680, 805, 1632, 2765, 2766 |
| Bme18I | GGWCC | 4 cut(s) | 49, 349, 801, 2066 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 128 |
| BmeT110I | CYCGRG | 2 cut(s) | 1723, 2764 |
| BmgBI | CACGTC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 7 cut(s) | 49, 349, 739, 801, 807, 1655, 2066 |
| BmrFI | CCNGG | 5 cut(s) | 680, 805, 1632, 2765, 2766 |
| BpiI | GAAGAC | 3 cut(s) | 1803, 2142, 2758 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 227, 259 |
| BpmI | CTGGAG | 3 cut(s) | 56, 65, 1067 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 382 |
| BpuEI | CTTGAG | 1 cut(s) | 2070 |
| BpuMI | CCSGG | 3 cut(s) | 805, 2765, 2766 |
| BsaBI | GATNNNNATC | 4 cut(s) | 924, 1029, 2349, 2493 |
| BsaHI | GRCGYC | 1 cut(s) | 659 |
| BsaJI | CCNNGG | 6 cut(s) | 752, 804, 1724, 2465, 2596, 2764 |
| BsaWI | WCCGGW | 1 cut(s) | 2890 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 173, 203, 284, 314, 341, 371, 2394, 2424 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1270, 1889 |
| Bse118I | RCCGGY | 2 cut(s) | 778, 2890 |
| Bse1I | ACTGG | 2 cut(s) | 849, 2258 |
| Bse3DI | GCAATG | 5 cut(s) | 941, 1077, 1156, 1258, 1696 |
| Bse8I | GATNNNNATC | 4 cut(s) | 924, 1029, 2349, 2493 |
| BseBI | CCWGG | 2 cut(s) | 680, 1632 |
| BseDI | CCNNGG | 6 cut(s) | 752, 804, 1724, 2465, 2596, 2764 |
| BseGI | GGATG | 7 cut(s) | 1324, 1404, 1592, 1714, 1799, 2591, 2606 |
| BseJI | GATNNNNATC | 4 cut(s) | 924, 1029, 2349, 2493 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1270, 1889 |
| BseMI | GCAATG | 5 cut(s) | 941, 1077, 1156, 1258, 1696 |
| BseMII | CTCAG | 2 cut(s) | 432, 1071 |
| BseNI | ACTGG | 2 cut(s) | 849, 2258 |
| BseRI | GAGGAG | 4 cut(s) | 178, 230, 235, 1588 |
| BseXI | GCAGC | 6 cut(s) | 1169, 1396, 1399, 1576, 2317, 2821 |
| BseYI | CCCAGC | 1 cut(s) | 457 |
| BsgI | GTGCAG | 1 cut(s) | 152 |
| Bsh1236I | CGCG | 2 cut(s) | 126, 900 |
| Bsh1285I | CGRYCG | 1 cut(s) | 495 |
| BshFI | GGCC | 5 cut(s) | 63, 740, 809, 1656, 2470 |
| BshNI | GGYRCC | 3 cut(s) | 658, 1618, 2546 |
| BshTI | ACCGGT | 1 cut(s) | 2890 |
| BsiEI | CGRYCG | 1 cut(s) | 495 |
| BsiHKAI | GWGCWC | 4 cut(s) | 240, 1924, 2086, 2298 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1723, 2764 |
| BsiSI | CCGG | 5 cut(s) | 662, 779, 804, 2765, 2891 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1270, 1889 |
| BsmAI | GTCTC | 3 cut(s) | 2025, 2077, 2550 |
| BsmBI | CGTCTC | 2 cut(s) | 2025, 2550 |
| BsmI | GAATGC | 2 cut(s) | 398, 1591 |
| BsnI | GGCC | 5 cut(s) | 63, 740, 809, 1656, 2470 |
| BsoBI | CYCGRG | 2 cut(s) | 1723, 2764 |
| Bsp1286I | GDGCHC | 5 cut(s) | 240, 1924, 2014, 2086, 2298 |
| Bsp1407I | TGTACA | 1 cut(s) | 1525 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 382 |
| Bsp68I | TCGCGA | 1 cut(s) | 900 |
| BspANI | GGCC | 5 cut(s) | 63, 740, 809, 1656, 2470 |
| BspCNI | CTCAG | 2 cut(s) | 433, 1072 |
| BspFNI | CGCG | 2 cut(s) | 126, 900 |
| BspMAI | CTGCAG | 2 cut(s) | 874, 1187 |
| BspMI | ACCTGC | 1 cut(s) | 2365 |
| BspPI | GGATC | 8 cut(s) | 670, 914, 1025, 1038, 1130, 1246, 1259, 1358 |
| BspQI | GCTCTTC | 1 cut(s) | 2247 |
| BspT107I | GGYRCC | 3 cut(s) | 658, 1618, 2546 |
| BspTI | CTTAAG | 1 cut(s) | 929 |
| BsrBI | CCGCTC | 2 cut(s) | 1517, 2858 |
| BsrDI | GCAATG | 5 cut(s) | 941, 1077, 1156, 1258, 1696 |
| BsrFI | RCCGGY | 2 cut(s) | 778, 2890 |
| BsrGI | TGTACA | 1 cut(s) | 1525 |
| BsrI | ACTGG | 2 cut(s) | 849, 2258 |
| BssAI | RCCGGY | 2 cut(s) | 778, 2890 |
| BssECI | CCNNGG | 6 cut(s) | 752, 804, 1724, 2465, 2596, 2764 |
| BssNI | GRCGYC | 1 cut(s) | 659 |
| BssT1I | CCWWGG | 2 cut(s) | 752, 2596 |
| Bst2UI | CCWGG | 2 cut(s) | 680, 1632 |
| Bst4CI | ACNGT | 7 cut(s) | 415, 841, 1530, 2205, 2300, 2312, 2551 |
| Bst6I | CTCTTC | 2 cut(s) | 35, 2247 |
| BstACI | GRCGYC | 1 cut(s) | 659 |
| BstAFI | CTTAAG | 1 cut(s) | 929 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2507 |
| BstAUI | TGTACA | 1 cut(s) | 1525 |
| BstC8I | GCNNGC | 7 cut(s) | 41, 624, 948, 1265, 1797, 2121, 2726 |
| BstDEI | CTNAG | 5 cut(s) | 382, 441, 690, 1080, 2439 |
| BstEII | GGTNACC | 1 cut(s) | 844 |
| BstF5I | GGATG | 7 cut(s) | 1324, 1404, 1592, 1714, 1799, 2591, 2606 |
| BstFNI | CGCG | 2 cut(s) | 126, 900 |
| BstH2I | RGCGCY | 2 cut(s) | 389, 662 |
| BstHHI | GCGC | 3 cut(s) | 39, 388, 661 |
| BstMAI | GTCTC | 3 cut(s) | 2025, 2077, 2550 |
| BstMCI | CGRYCG | 1 cut(s) | 495 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 281, 737, 947, 1264, 1426, 1963, 2302, 2422, 2507 |
| BstNI | CCWGG | 2 cut(s) | 680, 1632 |
| BstNSI | RCATGY | 2 cut(s) | 211, 1182 |
| BstPI | GGTNACC | 1 cut(s) | 844 |
| BstSCI | CCNGG | 5 cut(s) | 678, 803, 1630, 2763, 2764 |
| BstSFI | CTRYAG | 4 cut(s) | 414, 870, 1183, 1758 |
| BstUI | CGCG | 2 cut(s) | 126, 900 |
| BstV1I | GCAGC | 6 cut(s) | 1169, 1396, 1399, 1576, 2317, 2821 |
| BstV2I | GAAGAC | 3 cut(s) | 1803, 2142, 2758 |
| BstX2I | RGATCY | 6 cut(s) | 418, 675, 1030, 1251, 1960, 2404 |
| BstYI | RGATCY | 6 cut(s) | 418, 675, 1030, 1251, 1960, 2404 |
| BsuRI | GGCC | 5 cut(s) | 63, 740, 809, 1656, 2470 |
| BtrI | CACGTC | 1 cut(s) | 229 |
| BtsCI | GGATG | 7 cut(s) | 1324, 1404, 1592, 1714, 1799, 2591, 2606 |
| BtsI | GCAGTG | 2 cut(s) | 879, 1192 |
| BtsIMutI | CAGTG | 3 cut(s) | 879, 1192, 2265 |
| BtuMI | TCGCGA | 1 cut(s) | 900 |
| BveI | ACCTGC | 1 cut(s) | 2365 |
| Cac8I | GCNNGC | 7 cut(s) | 41, 624, 948, 1265, 1797, 2121, 2726 |
| CaiI | CAGNNNCTG | 1 cut(s) | 533 |
| CfoI | GCGC | 3 cut(s) | 39, 388, 661 |
| Cfr10I | RCCGGY | 2 cut(s) | 778, 2890 |
| Cfr13I | GGNCC | 7 cut(s) | 49, 349, 739, 801, 807, 1655, 2066 |
| Cfr9I | CCCGGG | 1 cut(s) | 2764 |
| CseI | GACGC | 3 cut(s) | 132, 1046, 2007 |
| Csp6I | GTAC | 5 cut(s) | 1488, 1526, 2102, 2547, 2826 |
| CspAI | ACCGGT | 1 cut(s) | 2890 |
| CviQI | GTAC | 5 cut(s) | 1488, 1526, 2102, 2547, 2826 |
| DdeI | CTNAG | 5 cut(s) | 382, 441, 690, 1080, 2439 |
| DinI | GGCGCC | 1 cut(s) | 660 |
| DraI | TTTAAA | 1 cut(s) | 1857 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 314 |
| DriI | GACNNNNNGTC | 1 cut(s) | 128 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 314 |
| Eam1104I | CTCTTC | 2 cut(s) | 35, 2247 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 128 |
| EarI | CTCTTC | 2 cut(s) | 35, 2247 |
| EciI | GGCGGA | 2 cut(s) | 56, 79 |
| Ecl136II | GAGCTC | 1 cut(s) | 238 |
| Eco130I | CCWWGG | 2 cut(s) | 752, 2596 |
| Eco147I | AGGCCT | 1 cut(s) | 63 |
| Eco24I | GRGCYC | 2 cut(s) | 240, 2014 |
| Eco47I | GGWCC | 4 cut(s) | 49, 349, 801, 2066 |
| Eco47III | AGCGCT | 1 cut(s) | 387 |
| Eco53kI | GAGCTC | 1 cut(s) | 238 |
| Eco57I | CTGAAG | 1 cut(s) | 2546 |
| Eco88I | CYCGRG | 2 cut(s) | 1723, 2764 |
| Eco91I | GGTNACC | 1 cut(s) | 844 |
| EcoICRI | GAGCTC | 1 cut(s) | 238 |
| EcoO109I | RGGNCCY | 3 cut(s) | 49, 349, 2066 |
| EcoO65I | GGTNACC | 1 cut(s) | 844 |
| EcoRII | CCWGG | 2 cut(s) | 678, 1630 |
| EcoT14I | CCWWGG | 2 cut(s) | 752, 2596 |
| EcoT22I | ATGCAT | 1 cut(s) | 2043 |
| EcoT38I | GRGCYC | 2 cut(s) | 240, 2014 |
| EgeI | GGCGCC | 1 cut(s) | 660 |
| EheI | GGCGCC | 1 cut(s) | 660 |
| ErhI | CCWWGG | 2 cut(s) | 752, 2596 |
| Esp3I | CGTCTC | 2 cut(s) | 2025, 2550 |
| FauI | CCCGC | 2 cut(s) | 260, 1263 |
| FbaI | TGATCA | 1 cut(s) | 2695 |
| Fnu4HI | GCNGC | 9 cut(s) | 219, 285, 288, 1183, 1410, 1413, 1590, 2306, 2810 |
| FokI | GGATG | 7 cut(s) | 1331, 1411, 1579, 1721, 1786, 2578, 2593 |
| FriOI | GRGCYC | 2 cut(s) | 240, 2014 |
| Fsp4HI | GCNGC | 9 cut(s) | 219, 285, 288, 1183, 1410, 1413, 1590, 2306, 2810 |
| FspBI | CTAG | 8 cut(s) | 402, 426, 753, 908, 1668, 1913, 2063, 2408 |
| GlaI | GCGC | 3 cut(s) | 38, 387, 660 |
| GluI | GCNGC | 9 cut(s) | 219, 285, 288, 1183, 1410, 1413, 1590, 2306, 2810 |
| GsaI | CCCAGC | 1 cut(s) | 461 |
| GsuI | CTGGAG | 3 cut(s) | 56, 65, 1067 |
| HaeII | RGCGCY | 2 cut(s) | 389, 662 |
| HaeIII | GGCC | 5 cut(s) | 63, 740, 809, 1656, 2470 |
| HapII | CCGG | 5 cut(s) | 662, 779, 804, 2765, 2891 |
| HgaI | GACGC | 3 cut(s) | 132, 1046, 2007 |
| HhaI | GCGC | 3 cut(s) | 39, 388, 661 |
| Hin1I | GRCGYC | 1 cut(s) | 659 |
| Hin6I | GCGC | 3 cut(s) | 37, 386, 659 |
| HinP1I | GCGC | 3 cut(s) | 37, 386, 659 |
| HincII | GTYRAC | 1 cut(s) | 913 |
| HindII | GTYRAC | 1 cut(s) | 913 |
| HindIII | AAGCTT | 2 cut(s) | 379, 2414 |
| HpaII | CCGG | 5 cut(s) | 662, 779, 804, 2765, 2891 |
| HphI | GGTGA | 9 cut(s) | 169, 322, 346, 442, 856, 1494, 1933, 2168, 2491 |
| Hpy166II | GTNNAC | 3 cut(s) | 913, 1210, 1849 |
| Hpy188I | TCNGA | 9 cut(s) | 122, 304, 924, 1035, 1081, 1135, 1645, 2526, 2802 |
| Hpy8I | GTNNAC | 3 cut(s) | 913, 1210, 1849 |
| Hpy99I | CGWCG | 6 cut(s) | 116, 126, 233, 236, 2399, 2402 |
| HpyCH4III | ACNGT | 7 cut(s) | 415, 841, 1530, 2205, 2300, 2312, 2551 |
| HpyCH4IV | ACGT | 2 cut(s) | 228, 2559 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 281, 737, 947, 1264, 1426, 1963, 2302, 2422, 2507 |
| HpyF3I | CTNAG | 5 cut(s) | 382, 441, 690, 1080, 2439 |
| HpySE526I | ACGT | 2 cut(s) | 228, 2559 |
| Hsp92I | GRCGYC | 1 cut(s) | 659 |
| HspAI | GCGC | 3 cut(s) | 37, 386, 659 |
| KasI | GGCGCC | 1 cut(s) | 658 |
| KpnI | GGTACC | 1 cut(s) | 2550 |
| Ksp22I | TGATCA | 1 cut(s) | 2695 |
| LguI | GCTCTTC | 1 cut(s) | 2247 |
| LmnI | GCTCC | 4 cut(s) | 243, 345, 1693, 2009 |
| Lsp1109I | GCAGC | 6 cut(s) | 1169, 1396, 1399, 1576, 2317, 2821 |
| MaeI | CTAG | 8 cut(s) | 402, 426, 753, 908, 1668, 1913, 2063, 2408 |
| MaeII | ACGT | 2 cut(s) | 228, 2559 |
| MaeIII | GTNAC | 3 cut(s) | 844, 1500, 2573 |
| MbiI | CCGCTC | 2 cut(s) | 1517, 2858 |
| MfeI | CAATTG | 1 cut(s) | 697 |
| MflI | RGATCY | 6 cut(s) | 418, 675, 1030, 1251, 1960, 2404 |
| MhlI | GDGCHC | 5 cut(s) | 240, 1924, 2014, 2086, 2298 |
| Mly113I | GGCGCC | 1 cut(s) | 659 |
| MlyI | GAGTC | 4 cut(s) | 95, 575, 583, 1058 |
| MmeI | TCCRAC | 1 cut(s) | 145 |
| Mph1103I | ATGCAT | 1 cut(s) | 2043 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2094 |
| MspCI | CTTAAG | 1 cut(s) | 929 |
| MspI | CCGG | 5 cut(s) | 662, 779, 804, 2765, 2891 |
| MspR9I | CCNGG | 5 cut(s) | 680, 805, 1632, 2765, 2766 |
| MunI | CAATTG | 1 cut(s) | 697 |
| Mva1269I | GAATGC | 2 cut(s) | 398, 1591 |
| MvaI | CCWGG | 2 cut(s) | 680, 1632 |
| MvnI | CGCG | 2 cut(s) | 126, 900 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 281, 737, 947, 1264, 1426, 1963, 2302, 2422, 2507 |
| NarI | GGCGCC | 1 cut(s) | 659 |
| NciI | CCSGG | 3 cut(s) | 805, 2765, 2766 |
| NmeAIII | GCCGAG | 1 cut(s) | 2446 |
| NmuCI | GTSAC | 3 cut(s) | 844, 1500, 2573 |
| NruI | TCGCGA | 1 cut(s) | 900 |
| NsiI | ATGCAT | 1 cut(s) | 2043 |
| NspI | RCATGY | 2 cut(s) | 211, 1182 |
| PaqCI | CACCTGC | 1 cut(s) | 2365 |
| PceI | AGGCCT | 1 cut(s) | 63 |
| PciI | ACATGT | 1 cut(s) | 207 |
| PciSI | GCTCTTC | 1 cut(s) | 2247 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 650, 1345 |
| PctI | GAATGC | 2 cut(s) | 398, 1591 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2094 |
| PfeI | GAWTC | 9 cut(s) | 686, 866, 925, 1156, 1716, 1838, 2128, 2273, 2657 |
| PfoI | TCCNGGA | 1 cut(s) | 1630 |
| PinAI | ACCGGT | 1 cut(s) | 2890 |
| PkrI | GCNGC | 9 cut(s) | 220, 286, 289, 1184, 1411, 1414, 1591, 2307, 2811 |
| Ple19I | CGATCG | 1 cut(s) | 495 |
| PleI | GAGTC | 4 cut(s) | 94, 575, 582, 1057 |
| PluTI | GGCGCC | 1 cut(s) | 662 |
| PpsI | GAGTC | 4 cut(s) | 94, 575, 582, 1057 |
| PpuMI | RGGWCCY | 3 cut(s) | 49, 349, 2066 |
| PscI | ACATGT | 1 cut(s) | 207 |
| PsiI | TTATAA | 1 cut(s) | 672 |
| Psp124BI | GAGCTC | 1 cut(s) | 240 |
| Psp5II | RGGWCCY | 3 cut(s) | 49, 349, 2066 |
| Psp6I | CCWGG | 2 cut(s) | 678, 1630 |
| PspEI | GGTNACC | 1 cut(s) | 844 |
| PspFI | CCCAGC | 1 cut(s) | 457 |
| PspGI | CCWGG | 2 cut(s) | 678, 1630 |
| PspPI | GGNCC | 7 cut(s) | 49, 349, 739, 801, 807, 1655, 2066 |
| PspPPI | RGGWCCY | 3 cut(s) | 49, 349, 2066 |
| PstI | CTGCAG | 2 cut(s) | 874, 1187 |
| PstNI | CAGNNNCTG | 1 cut(s) | 533 |
| PsuI | RGATCY | 6 cut(s) | 418, 675, 1030, 1251, 1960, 2404 |
| PvuI | CGATCG | 1 cut(s) | 495 |
| RgaI | GCGATCGC | 1 cut(s) | 495 |
| RruI | TCGCGA | 1 cut(s) | 900 |
| RsaI | GTAC | 5 cut(s) | 1489, 1527, 2103, 2548, 2827 |
| RsaNI | GTAC | 5 cut(s) | 1488, 1526, 2102, 2547, 2826 |
| SacI | GAGCTC | 1 cut(s) | 240 |
| SapI | GCTCTTC | 1 cut(s) | 2247 |
| SatI | GCNGC | 9 cut(s) | 219, 285, 288, 1183, 1410, 1413, 1590, 2306, 2810 |
| Sau96I | GGNCC | 7 cut(s) | 49, 349, 739, 801, 807, 1655, 2066 |
| SchI | GAGTC | 4 cut(s) | 95, 575, 583, 1058 |
| ScrFI | CCNGG | 5 cut(s) | 680, 805, 1632, 2765, 2766 |
| SduI | GDGCHC | 5 cut(s) | 240, 1924, 2014, 2086, 2298 |
| SfaAI | GCGATCGC | 1 cut(s) | 495 |
| SfcI | CTRYAG | 4 cut(s) | 414, 870, 1183, 1758 |
| SfoI | GGCGCC | 1 cut(s) | 660 |
| SgfI | GCGATCGC | 1 cut(s) | 495 |
| SinI | GGWCC | 4 cut(s) | 49, 349, 801, 2066 |
| SmaI | CCCGGG | 1 cut(s) | 2766 |
| SmlI | CTYRAG | 2 cut(s) | 929, 2085 |
| SmoI | CTYRAG | 2 cut(s) | 929, 2085 |
| SseBI | AGGCCT | 1 cut(s) | 63 |
| SspDI | GGCGCC | 1 cut(s) | 658 |
| SspMI | CTAG | 8 cut(s) | 402, 426, 753, 908, 1668, 1913, 2063, 2408 |
| SstI | GAGCTC | 1 cut(s) | 240 |
| StuI | AGGCCT | 1 cut(s) | 63 |
| StyD4I | CCNGG | 5 cut(s) | 678, 803, 1630, 2763, 2764 |
| StyI | CCWWGG | 2 cut(s) | 752, 2596 |
| TaaI | ACNGT | 7 cut(s) | 415, 841, 1530, 2205, 2300, 2312, 2551 |
| TaiI | ACGT | 2 cut(s) | 231, 2562 |
| TatI | WGTACW | 1 cut(s) | 1525 |
| TauI | GCSGC | 3 cut(s) | 221, 287, 290 |
| TfiI | GAWTC | 9 cut(s) | 686, 866, 925, 1156, 1716, 1838, 2128, 2273, 2657 |
| TscAI | CASTG | 3 cut(s) | 879, 1192, 2265 |
| TseFI | GTSAC | 3 cut(s) | 844, 1500, 2573 |
| TseI | GCWGC | 6 cut(s) | 1182, 1409, 1412, 1589, 2305, 2809 |
| Tsp45I | GTSAC | 3 cut(s) | 844, 1500, 2573 |
| TspDTI | ATGAA | 8 cut(s) | 879, 1725, 1803, 1851, 2163, 2256, 2580, 2796 |
| TspGWI | ACGGA | 4 cut(s) | 642, 946, 2415, 2772 |
| TspMI | CCCGGG | 1 cut(s) | 2764 |
| TspRI | CASTG | 3 cut(s) | 879, 1192, 2265 |
| Vha464I | CTTAAG | 1 cut(s) | 929 |
| VpaK11BI | GGWCC | 4 cut(s) | 49, 349, 801, 2066 |
| XapI | RAATTY | 4 cut(s) | 565, 894, 1098, 2179 |
| XbaI | TCTAGA | 1 cut(s) | 401 |
| XceI | RCATGY | 2 cut(s) | 211, 1182 |
| XmaI | CCCGGG | 1 cut(s) | 2764 |
| XmaJI | CCTAGG | 1 cut(s) | 752 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2094 |
| XspI | CTAG | 8 cut(s) | 402, 426, 753, 908, 1668, 1913, 2063, 2408 |
| Zsp2I | ATGCAT | 1 cut(s) | 2043 |