Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0010132

Physical Location & Seq

Genomic Coordinates Reverse (-)

2889055 .. 2891928

Gene Structure 2874 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1035300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1062 bp

ATGCGGAGCTTCTTTGGTAAAGGCCGTACCTCGTCACTTCCCAAACAAAATGCTTCGTATGGAAGCTCAGCTTCAGAGAAAGATTTCAAGCTGATGAGCGGATCAATGGGCAGTCTCAAAATACCAGAAGCTGTTCCTCCTCCCGACCAAGACTGTCAGAGACTTAAAAAAGCCTTTGATGGATTGGGAACAGATGAGGACGCTGTGGTATGGATATTAGGACACAGGAATGCTAGCCAAAGGAGGAAAATCAAAGACACGTACCAACAGCTTTACAATAAATCCCTCATTGATGATCTCCACGCTGAACTTTCCGGAGATTTCAGAAATGCAGTACTTTTGTGGACATATGATCCTCCCGAAAGGGACGCTAAGTTGGCGAGAGATGCACTGAGGACGAAGAAGAAAGGCGTAAAACACCTAAAAGTGTTGGTTGAGATAGCTTGTGCATCATCTCCTAACCACTTGATGGCCGTGAGACAGGTCTACAGTTCACTGTTTGATTGTTCGCTTGAGGAGGACATTGCCTCAACCGTTTCCCTACCCATCAGAAAGCTTCTCGTGGGTTTAGTGAGCTCGTACAGGTACGACAGGCAGCTGGTGGATACAGGCATTGCCAATTCAGAGGCATCTAGGTTACACGAAGCCATCAAAACAAAGCAATACGATCATGATCATGTTGTTTGGATACTCAGCACAAGGAACATCTTTCAACTAAGAGCAACATTTGAGTGTTACAAACAAAAGTATGGACATTCCATCGACCAGGACATTAAGAGCTGCGGCAATGGTGATTTCGAATCCGTGTTGATTGCGGTATATTGGTGCATAGCAGCACCTGCGAAATATTTTGCAGAGGTCATCAAAGATTCCGTTGTCGGACTTGGGACGGATGAAGATTCTCTGAATAGAGCCATTGTCACCCGAGCTGAGATCGACATGATCAAAATCCGAGAGGAGTATTCAAAAATGTCGAAAACCAGCCTTGTCGATGACGTTATAGGCGACACATCAGGAGACTACAAAAACTTCTTGTTGACCTTGATTGGAGCAAGAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0010035 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Annexin

Protein Analysis

354

Amino Acids

39.59

Weight (kDa)

8.08

Isoelectric Point (pI)

36.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Annexin	PF00191	50 - 114	1.3e-21	Annexin
Annexin	PF00191	123 - 190	1.9e-07	Annexin
Annexin	PF00191	209 - 272	4.9e-17	Annexin
Annexin	PF00191	283 - 348	3.4e-18	Annexin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38760
fragaria_vesca	FvH4_7g02633 FvH4_7g02633 FvH4_7g02633 FvH4_7g02633
malus_domestica	MD02G1291300.v1.1 MD07G1035300.v1.1
prunus_persica	Prupe.2G031700_v2.0.a1
pyrus_communis	pycom02g24620
rosa_chinensis	RchiOBHm_Chr1g0321331
rosa_laevigata	RLG00000030428
rosa_multiflora	Rmu_sc0000724.1_g000005 Rmu_sc0000960.1_g000011
rosa_roxburghii	Rroxscaffold_160G00433960 Rroxscaffold_4G00327820
rosa_rugosa	Rorug01G0032300
rosa_samantha	Rh1AG044300 Rh1BG042000 Rh1CG047000 Rh1DG051500
rosa_wichuraiana	Rw1G003920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	847
Acc36I	ACCTGC	1 cut(s)	847
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccBSI	CCGCTC	1 cut(s)	99
AccI	GTMKAC	1 cut(s)	486
AccIII	TCCGGA	1 cut(s)	314
AciI	CCGC	4 cut(s)	4, 99, 783, 815
AclWI	GGATC	2 cut(s)	109, 347
AcoI	YGGCCR	1 cut(s)	471
AcuI	CTGAAG	1 cut(s)	57
AfaI	GTAC	5 cut(s)	28, 263, 336, 581, 587
AfiI	CCNNNNNNNGG	1 cut(s)	469
AflIII	ACRYGT	1 cut(s)	258
AgsI	TTSAA	3 cut(s)	88, 713, 966
AjnI	CCWGG	1 cut(s)	765
Alw21I	GWGCWC	1 cut(s)	578
Alw26I	GTCTC	4 cut(s)	119, 154, 472, 1011
AlwI	GGATC	2 cut(s)	109, 347
AlwNI	CAGNNNCTG	2 cut(s)	131, 839
Ama87I	CYCGRG	1 cut(s)	924
Aor13HI	TCCGGA	1 cut(s)	314
AoxI	GGCC	2 cut(s)	22, 471
ApeKI	GCWGC	3 cut(s)	595, 780, 833
Asp700I	GAANNNNTTC	2 cut(s)	83, 132
AsuHPI	GGTGA	2 cut(s)	803, 913
AsuII	TTCGAA	1 cut(s)	798
AsuNHI	GCTAGC	1 cut(s)	233
AvaI	CYCGRG	1 cut(s)	924
BanII	GRGCYC	1 cut(s)	578
BauI	CACGAG	1 cut(s)	560
Bbv12I	GWGCWC	1 cut(s)	578
BbvI	GCAGC	3 cut(s)	607, 767, 845
BccI	CCATC	5 cut(s)	173, 463, 554, 656, 767
BceAI	ACGGC	2 cut(s)	9, 458
BciT130I	CCWGG	1 cut(s)	767
BciVI	GTATCC	2 cut(s)	598, 681
BclI	TGATCA	2 cut(s)	673, 942
BcoDI	GTCTC	4 cut(s)	119, 154, 472, 1011
BfaI	CTAG	2 cut(s)	234, 633
BfmI	CTRYAG	1 cut(s)	487
BfuAI	ACCTGC	1 cut(s)	847
BfuI	GTATCC	2 cut(s)	598, 681
BisI	GCNGC	4 cut(s)	596, 781, 784, 834
BlpI	GCTNAGC	1 cut(s)	67
BlsI	GCNGC	4 cut(s)	597, 782, 785, 835
BmcAI	AGTACT	1 cut(s)	336
Bme1390I	CCNGG	1 cut(s)	767
BmeT110I	CYCGRG	1 cut(s)	924
BmrFI	CCNGG	1 cut(s)	767
BmsI	GCATC	3 cut(s)	376, 458, 638
BmtI	GCTAGC	1 cut(s)	237
Bpu1102I	GCTNAGC	1 cut(s)	67
Bpu14I	TTCGAA	1 cut(s)	798
BpuEI	CTTGAG	1 cut(s)	533
BsaAI	YACGTR	1 cut(s)	261
BsaBI	GATNNNNATC	2 cut(s)	672, 947
BsaWI	WCCGGW	1 cut(s)	314
BsaXI	ACNNNNNCTCC	1 cut(s)	1041
Bsc4I	CCNNNNNNNGG	1 cut(s)	469
Bse3DI	GCAATG	3 cut(s)	522, 612, 793
Bse8I	GATNNNNATC	2 cut(s)	672, 947
BseAI	TCCGGA	1 cut(s)	314
BseBI	CCWGG	1 cut(s)	767
BseGI	GGATG	1 cut(s)	898
BseJI	GATNNNNATC	2 cut(s)	672, 947
BseLI	CCNNNNNNNGG	1 cut(s)	469
BseMI	GCAATG	3 cut(s)	522, 612, 793
BseMII	CTCAG	4 cut(s)	81, 383, 706, 921
BseRI	GAGGAG	3 cut(s)	129, 530, 971
BseXI	GCAGC	3 cut(s)	607, 767, 845
BshFI	GGCC	2 cut(s)	24, 473
BsiHKAI	GWGCWC	1 cut(s)	578
BsiHKCI	CYCGRG	1 cut(s)	924
BsiSI	CCGG	1 cut(s)	315
BslFI	GGGAC	2 cut(s)	380, 901
BslI	CCNNNNNNNGG	1 cut(s)	469
BsmAI	GTCTC	4 cut(s)	119, 154, 472, 1011
BsmFI	GGGAC	2 cut(s)	380, 901
BsmI	GAATGC	1 cut(s)	235
BsnI	GGCC	2 cut(s)	24, 473
BsoBI	CYCGRG	1 cut(s)	924
Bsp119I	TTCGAA	1 cut(s)	798
Bsp1286I	GDGCHC	1 cut(s)	578
Bsp13I	TCCGGA	1 cut(s)	314
Bsp143I	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
Bsp1720I	GCTNAGC	1 cut(s)	67
BspACI	CCGC	4 cut(s)	4, 99, 783, 815
BspANI	GGCC	2 cut(s)	24, 473
BspCNI	CTCAG	4 cut(s)	80, 384, 705, 922
BspEI	TCCGGA	1 cut(s)	314
BspHI	TCATGA	1 cut(s)	670
BspMI	ACCTGC	1 cut(s)	847
BspOI	GCTAGC	1 cut(s)	237
BspPI	GGATC	2 cut(s)	109, 347
BspT104I	TTCGAA	1 cut(s)	798
BsrBI	CCGCTC	1 cut(s)	99
BsrDI	GCAATG	3 cut(s)	522, 612, 793
BssMI	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
BssSI	CACGAG	1 cut(s)	560
Bst2BI	CACGAG	1 cut(s)	560
Bst2UI	CCWGG	1 cut(s)	767
Bst4CI	ACNGT	4 cut(s)	155, 491, 498, 535
BstAPI	GCANNNNNTGC	1 cut(s)	839
BstBAI	YACGTR	1 cut(s)	261
BstBI	TTCGAA	1 cut(s)	798
BstC8I	GCNNGC	1 cut(s)	235
BstDEI	CTNAG	6 cut(s)	67, 372, 392, 692, 716, 930
BstF5I	GGATG	1 cut(s)	898
BstKTI	GATC	7 cut(s)	104, 298, 355, 670, 676, 936, 945
BstMAI	GTCTC	4 cut(s)	119, 154, 472, 1011
BstMBI	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
BstMWI	GCNNNNNNNGC	3 cut(s)	377, 386, 839
BstNI	CCWGG	1 cut(s)	767
BstSCI	CCNGG	1 cut(s)	765
BstSFI	CTRYAG	1 cut(s)	487
BstV1I	GCAGC	3 cut(s)	607, 767, 845
BsuI	GTATCC	2 cut(s)	598, 681
BsuRI	GGCC	2 cut(s)	24, 473
BtsCI	GGATG	1 cut(s)	898
BtsIMutI	CAGTG	2 cut(s)	389, 494
BveI	ACCTGC	1 cut(s)	847
Cac8I	GCNNGC	1 cut(s)	235
CaiI	CAGNNNCTG	2 cut(s)	131, 839
CciI	TCATGA	1 cut(s)	670
CseI	GACGC	2 cut(s)	209, 377
Csp6I	GTAC	5 cut(s)	27, 262, 335, 580, 586
CviAII	CATG	3 cut(s)	671, 677, 940
CviQI	GTAC	5 cut(s)	27, 262, 335, 580, 586
DdeI	CTNAG	6 cut(s)	67, 372, 392, 692, 716, 930
DpnI	GATC	7 cut(s)	103, 297, 354, 669, 675, 935, 944
DpnII	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
EaeI	YGGCCR	1 cut(s)	471
Ecl136II	GAGCTC	1 cut(s)	576
Eco24I	GRGCYC	1 cut(s)	578
Eco53kI	GAGCTC	1 cut(s)	576
Eco57I	CTGAAG	1 cut(s)	57
Eco88I	CYCGRG	1 cut(s)	924
EcoICRI	GAGCTC	1 cut(s)	576
EcoRII	CCWGG	1 cut(s)	765
EcoT38I	GRGCYC	1 cut(s)	578
FaeI	CATG	3 cut(s)	674, 680, 943
FalI	AAGNNNNNCTT	2 cut(s)	55, 87
FaqI	GGGAC	2 cut(s)	380, 901
FatI	CATG	3 cut(s)	670, 676, 939
FauNDI	CATATG	1 cut(s)	349
FbaI	TGATCA	2 cut(s)	673, 942
FblI	GTMKAC	1 cut(s)	486
Fnu4HI	GCNGC	4 cut(s)	596, 781, 784, 834
FokI	GGATG	1 cut(s)	905
FriOI	GRGCYC	1 cut(s)	578
Fsp4HI	GCNGC	4 cut(s)	596, 781, 784, 834
FspBI	CTAG	2 cut(s)	234, 633
GluI	GCNGC	4 cut(s)	596, 781, 784, 834
HaeIII	GGCC	2 cut(s)	24, 473
HapII	CCGG	1 cut(s)	315
HgaI	GACGC	2 cut(s)	209, 377
Hin1II	CATG	3 cut(s)	674, 680, 943
HincII	GTYRAC	1 cut(s)	1038
HindII	GTYRAC	1 cut(s)	1038
HindIII	AAGCTT	1 cut(s)	554
HinfI	GANTC	4 cut(s)	800, 869, 899, 1056
HpaII	CCGG	1 cut(s)	315
HphI	GGTGA	2 cut(s)	803, 913
Hpy166II	GTNNAC	4 cut(s)	345, 487, 494, 1038
Hpy188I	TCNGA	8 cut(s)	76, 159, 326, 551, 625, 881, 906, 953
Hpy188III	TCNNGA	5 cut(s)	143, 315, 359, 671, 1014
Hpy8I	GTNNAC	4 cut(s)	345, 487, 494, 1038
HpyCH4III	ACNGT	4 cut(s)	155, 491, 498, 535
HpyCH4IV	ACGT	2 cut(s)	260, 996
HpyCH4V	TGCA	5 cut(s)	332, 389, 449, 828, 854
HpyF10VI	GCNNNNNNNGC	3 cut(s)	377, 386, 839
HpyF3I	CTNAG	6 cut(s)	67, 372, 392, 692, 716, 930
HpySE526I	ACGT	2 cut(s)	260, 996
Hsp92II	CATG	3 cut(s)	674, 680, 943
Kpn2I	TCCGGA	1 cut(s)	314
Ksp22I	TGATCA	2 cut(s)	673, 942
Kzo9I	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
LmnI	GCTCC	2 cut(s)	6, 1049
Lsp1109I	GCAGC	3 cut(s)	607, 767, 845
LweI	GCATC	3 cut(s)	376, 458, 638
MaeI	CTAG	2 cut(s)	234, 633
MaeII	ACGT	2 cut(s)	260, 996
MaeIII	GTNAC	4 cut(s)	33, 636, 734, 919
MalI	GATC	7 cut(s)	103, 297, 354, 669, 675, 935, 944
MbiI	CCGCTC	1 cut(s)	99
MboI	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
MboII	GAAGA	3 cut(s)	412, 415, 908
MhlI	GDGCHC	1 cut(s)	578
MluCI	AATT	1 cut(s)	619
MmeI	TCCRAC	1 cut(s)	859
MroI	TCCGGA	1 cut(s)	314
MroXI	GAANNNNTTC	2 cut(s)	83, 132
MseI	TTAA	2 cut(s)	165, 774
MslI	CAYNNNNRTG	3 cut(s)	228, 675, 730
MspA1I	CMGCKG	1 cut(s)	598
MspI	CCGG	1 cut(s)	315
MspR9I	CCNGG	1 cut(s)	767
Mva1269I	GAATGC	1 cut(s)	235
MvaI	CCWGG	1 cut(s)	767
MwoI	GCNNNNNNNGC	3 cut(s)	377, 386, 839
NdeI	CATATG	1 cut(s)	349
NdeII	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
NheI	GCTAGC	1 cut(s)	233
NlaIII	CATG	3 cut(s)	674, 680, 943
NmuCI	GTSAC	2 cut(s)	33, 919
NspV	TTCGAA	1 cut(s)	798
PagI	TCATGA	1 cut(s)	670
PaqCI	CACCTGC	1 cut(s)	847
PcsI	WCGNNNNNNNCGW	1 cut(s)	1002
PctI	GAATGC	1 cut(s)	235
PdmI	GAANNNNTTC	2 cut(s)	83, 132
PfeI	GAWTC	3 cut(s)	800, 869, 899
PflMI	CCANNNNNTGG	1 cut(s)	469
PkrI	GCNGC	4 cut(s)	597, 782, 785, 835
Ppu21I	YACGTR	1 cut(s)	261
Psp124BI	GAGCTC	1 cut(s)	578
Psp6I	CCWGG	1 cut(s)	765
PspGI	CCWGG	1 cut(s)	765
PstNI	CAGNNNCTG	2 cut(s)	131, 839
PvuII	CAGCTG	1 cut(s)	598
RsaI	GTAC	5 cut(s)	28, 263, 336, 581, 587
RsaNI	GTAC	5 cut(s)	27, 262, 335, 580, 586
RseI	CAYNNNNRTG	3 cut(s)	228, 675, 730
SacI	GAGCTC	1 cut(s)	578
SaqAI	TTAA	2 cut(s)	165, 774
SatI	GCNGC	4 cut(s)	596, 781, 784, 834
Sau3AI	GATC	7 cut(s)	101, 295, 352, 667, 673, 933, 942
ScaI	AGTACT	1 cut(s)	336
ScrFI	CCNGG	1 cut(s)	767
SduI	GDGCHC	1 cut(s)	578
SfaNI	GCATC	3 cut(s)	376, 458, 638
SfcI	CTRYAG	1 cut(s)	487
SfuI	TTCGAA	1 cut(s)	798
SmiMI	CAYNNNNRTG	3 cut(s)	228, 675, 730
SmlI	CTYRAG	1 cut(s)	512
SmoI	CTYRAG	1 cut(s)	512
Sse9I	AATT	1 cut(s)	619
SsiI	CCGC	4 cut(s)	4, 99, 783, 815
SspI	AATATT	1 cut(s)	848
SspMI	CTAG	2 cut(s)	234, 633
SstI	GAGCTC	1 cut(s)	578
StyD4I	CCNGG	1 cut(s)	765
TaaI	ACNGT	4 cut(s)	155, 491, 498, 535
TaiI	ACGT	2 cut(s)	263, 999
TaqI	TCGA	5 cut(s)	762, 798, 936, 974, 990
TasI	AATT	1 cut(s)	619
TatI	WGTACW	1 cut(s)	334
TauI	GCSGC	1 cut(s)	786
TfiI	GAWTC	3 cut(s)	800, 869, 899
Tru1I	TTAA	2 cut(s)	165, 774
Tru9I	TTAA	2 cut(s)	165, 774
TscAI	CASTG	2 cut(s)	396, 501
TseFI	GTSAC	2 cut(s)	33, 919
TseI	GCWGC	3 cut(s)	595, 780, 833
Tsp45I	GTSAC	2 cut(s)	33, 919
TspDTI	ATGAA	1 cut(s)	909
TspGWI	ACGGA	3 cut(s)	793, 862, 905
TspRI	CASTG	2 cut(s)	396, 501
Van91I	CCANNNNNTGG	1 cut(s)	469
XmiI	GTMKAC	1 cut(s)	486
XmnI	GAANNNNTTC	2 cut(s)	83, 132
XspI	CTAG	2 cut(s)	234, 633
ZrmI	AGTACT	1 cut(s)	336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.