Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0012948

Physical Location & Seq

Genomic Coordinates Forward (+)

10872645 .. 10874059

Gene Structure 1415 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1098500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGTCGAAGGTCGAGAGAAACGGCACTAATGGTTCTTCCGGGCAATATCGTTCCCCAAGTAGGTATGCTCCTACGCCGGGGAAGGCAACCGTCCTTGCATTGGGCAAGGCCTTCCCGAGCCAGCTCATCCCTCAAGACTGCTTGGTCGAGGGCTACATTCGCGATACAAAATGTGAAGATGCCGCCATCAAGGAGAAACTGGAGCGCCTGTGCAAAACCACCACTGTGAAGACTAGATACACAGTGATGTCCAAGGAGATCCTAGACAAATACCCTGAGCTAGCAACAGAGGGCACAGCCACCATCAAACAGCGGCTTGAAATCGCAAACCCTGCCGTGGTGGAGATGGCGTTGGAAGCCAGCCTTGCTTGCATCAAGGAATGGGGAAGGCCAGTTGAAGACATCACTCACATTGTCTACGTCTCCTCAAGTGAAATCAGACTCCCAGGCGGCGACCTCTACCTCTCAAGCAAGCTCGGCCTAAGGAACGATGTTGGCCGCGTCATGCTCTACTTCCTAGGCTGTTACGGTGGTGTCACCGGCCTCCGCGTTGCCAAAGACATAGCTGAAAACAACCCTGGAAGCCGCGTCTTGCTAACCACTTCCGAGACCACAATCCTTGGCTTCAGGCCCCCCAACAAGGCGCGCCCTTACGACCTTGTAGGGGCAGCGCTATTCGGGGACGGAGCTGCAGCTGTGATCATTGGAAGCAACCCAATAGCAGGACAAGAGTCTCCTTTCATGGAGCTCAACTACGCCGTCCAGCAGTTCCTCCCCGGGACTCATAATGTGATCGACGGCAGGCTGTCGGAGGAAGGCATTAACTTCAAGCTTGGAAGGGACCTGCCCCAGAAAATTGACGAGAACATAGAGGAGTTTTGCAAGAAGCTGACCGTGCCAGCGAAAGCAGAGCTGAAGAACTTCAACGAGCTGTTTTGGGCCGTGCACCCGGGCGGACCTGCGATTCTGAACAAGATGGAGAGCACGCTGAAGCTGAGCAGTGATAAGCTGGAGTGCAGCAGAAGGGCACTGATGGACTATGGGAACGTGAGTAGCAACACCATTTTTTATGTGATGGAAAATATGAGGGAGGAGTTGAAGTTGAAGAAGAAGGAGGGGAGGGATGAGGAATGGGGACTTGCCTTGGCATTTGGACCTGGGATTACTTTTGAAGGCATTCTCCTTCGCAGCCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0012505 GO:0016043 GO:0016740 GO:0016746 GO:0016747 GO:0019438 GO:0019748 GO:0022607 GO:0030198 GO:0030638 GO:0030639 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0071704 GO:0071840 GO:0080110 GO:0085029 GO:0090439 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chal_sti_synt_C Chal_sti_synt_N

Protein Analysis

399

Amino Acids

43.79

Weight (kDa)

6.86

Isoelectric Point (pI)

45.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chal_sti_synt_N	PF00195	25 - 239	4.3e-109	Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C	PF02797	249 - 398	7e-65	Chalcone and stilbene synthases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02050 AT4G00040
fragaria_vesca	FvH4_7g09471
malus_domestica	MD07G1098500.v1.1
prunus_persica	Prupe.2G122600_v2.0.a1
pyrus_communis	pycom07g08120
rosa_chinensis	RchiOBHm_Chr1g0346291
rosa_laevigata	RLG00000028808
rosa_multiflora	Rmu_co8385307.1_g000001 Rmu_sc0003363.1_g000039 Rmu_sc0003809.1_g000039
rosa_roxburghii	Rroxscaffold_4G00308760
rosa_rugosa	Rorug01G0178800
rosa_samantha	Rh1AG198200 Rh1BG164300 Rh1CG183500 Rh1DG195000
rosa_wichuraiana	Rw1G016660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	143
Acc36I	ACCTGC	2 cut(s)	852, 967
AccI	GTMKAC	1 cut(s)	417
AccII	CGCG	5 cut(s)	162, 501, 549, 588, 646
AciI	CCGC	7 cut(s)	183, 313, 450, 499, 547, 586, 954
AclWI	GGATC	1 cut(s)	253
AcoI	YGGCCR	1 cut(s)	496
AcuI	CTGAAG	3 cut(s)	610, 935, 1010
AfeI	AGCGCT	1 cut(s)	672
AfiI	CCNNNNNNNGG	7 cut(s)	60, 77, 100, 337, 640, 664, 722
AgsI	TTSAA	7 cut(s)	320, 398, 829, 925, 1099, 1105, 1172
AjnI	CCWGG	3 cut(s)	445, 577, 1156
AleI	CACNNNNGTG	1 cut(s)	224
Alw21I	GWGCWC	3 cut(s)	750, 948, 986
Alw26I	GTCTC	3 cut(s)	427, 602, 738
Alw44I	GTGCAC	1 cut(s)	944
AlwI	GGATC	1 cut(s)	253
Ama87I	CYCGRG	3 cut(s)	115, 776, 949
Aor51HI	AGCGCT	1 cut(s)	672
AoxI	GGCC	7 cut(s)	108, 389, 478, 496, 541, 629, 939
ApaLI	GTGCAC	1 cut(s)	944
ApeKI	GCWGC	5 cut(s)	668, 689, 692, 1017, 1188
AscI	GGCGCGCC	1 cut(s)	644
Asp700I	GAANNNNTTC	2 cut(s)	920, 1176
AspA2I	CCTAGG	1 cut(s)	517
AspLEI	GCGC	4 cut(s)	207, 646, 648, 673
AspS9I	GGNCC	5 cut(s)	630, 841, 939, 956, 1154
AsuC2I	CCSGG	6 cut(s)	40, 78, 777, 778, 950, 951
AsuHPI	GGTGA	1 cut(s)	529
AsuNHI	GCTAGC	1 cut(s)	280
AvaI	CYCGRG	3 cut(s)	115, 776, 949
AvaII	GGWCC	3 cut(s)	841, 956, 1154
AvrII	CCTAGG	1 cut(s)	517
AxyI	CCTNAGG	1 cut(s)	482
BaeGI	GKGCMC	3 cut(s)	296, 948, 1030
BanII	GRGCYC	1 cut(s)	750
BarI	GAAGNNNNNNTAC	2 cut(s)	221, 253
BbsI	GAAGAC	2 cut(s)	236, 405
Bbv12I	GWGCWC	3 cut(s)	750, 948, 986
BbvI	GCAGC	4 cut(s)	676, 680, 704, 1029
BccI	CCATC	6 cut(s)	194, 311, 340, 970, 1027, 1069
BceAI	ACGGC	5 cut(s)	37, 320, 743, 814, 926
BciT130I	CCWGG	3 cut(s)	447, 579, 1158
BclI	TGATCA	1 cut(s)	699
BcnI	CCSGG	6 cut(s)	40, 78, 777, 778, 950, 951
BcoDI	GTCTC	3 cut(s)	427, 602, 738
BfaI	CTAG	5 cut(s)	234, 263, 281, 518, 1195
BfmI	CTRYAG	1 cut(s)	690
BfoI	RGCGCY	2 cut(s)	208, 674
BfuAI	ACCTGC	2 cut(s)	852, 967
BlnI	CCTAGG	1 cut(s)	517
BlpI	GCTNAGC	1 cut(s)	995
Bme1390I	CCNGG	9 cut(s)	40, 78, 447, 579, 777, 778, 950, 951, 1158
Bme18I	GGWCC	3 cut(s)	841, 956, 1154
BmeT110I	CYCGRG	3 cut(s)	115, 776, 949
BmgT120I	GGNCC	5 cut(s)	630, 841, 939, 956, 1154
BmiI	GGNNCC	2 cut(s)	632, 842
BmrFI	CCNGG	9 cut(s)	40, 78, 447, 579, 777, 778, 950, 951, 1158
BmsI	GCATC	2 cut(s)	169, 381
BmtI	GCTAGC	1 cut(s)	284
BoxI	GACNNNNGTC	1 cut(s)	730
BpiI	GAAGAC	2 cut(s)	236, 405
BpmI	CTGGAG	2 cut(s)	221, 1031
Bpu10I	CCTNAGC	1 cut(s)	276
Bpu1102I	GCTNAGC	1 cut(s)	995
BpuEI	CTTGAG	3 cut(s)	117, 412, 451
BpuMI	CCSGG	6 cut(s)	40, 78, 777, 778, 950, 951
BsaI	GGTCTC	1 cut(s)	602
BsaXI	ACNNNNNCTCC	6 cut(s)	194, 224, 335, 365, 1085, 1115
Bsc4I	CCNNNNNNNGG	7 cut(s)	60, 77, 100, 337, 640, 664, 722
Bse118I	RCCGGY	1 cut(s)	539
Bse1I	ACTGG	2 cut(s)	204, 392
Bse21I	CCTNAGG	1 cut(s)	482
BseBI	CCWGG	3 cut(s)	447, 579, 1158
BseGI	GGATG	2 cut(s)	126, 1129
BseLI	CCNNNNNNNGG	7 cut(s)	60, 77, 100, 337, 640, 664, 722
BseMII	CTCAG	2 cut(s)	267, 986
BseNI	ACTGG	2 cut(s)	204, 392
BsePI	GCGCGC	1 cut(s)	644
BseRI	GAGGAG	3 cut(s)	415, 887, 1106
BseSI	GKGCMC	3 cut(s)	296, 948, 1030
BseXI	GCAGC	4 cut(s)	676, 680, 704, 1029
BsgI	GTGCAG	1 cut(s)	1036
Bsh1236I	CGCG	5 cut(s)	162, 501, 549, 588, 646
BshFI	GGCC	7 cut(s)	110, 391, 480, 498, 543, 631, 941
BsiHKAI	GWGCWC	3 cut(s)	750, 948, 986
BsiHKCI	CYCGRG	3 cut(s)	115, 776, 949
BsiSI	CCGG	5 cut(s)	39, 77, 540, 777, 950
BslFI	GGGAC	4 cut(s)	695, 793, 854, 1149
BslI	CCNNNNNNNGG	7 cut(s)	60, 77, 100, 337, 640, 664, 722
BsmAI	GTCTC	3 cut(s)	427, 602, 738
BsmBI	CGTCTC	1 cut(s)	427
BsmFI	GGGAC	4 cut(s)	695, 793, 854, 1149
BsmI	GAATGC	1 cut(s)	1176
BsnI	GGCC	7 cut(s)	110, 391, 480, 498, 543, 631, 941
Bso31I	GGTCTC	1 cut(s)	602
BsoBI	CYCGRG	3 cut(s)	115, 776, 949
Bsp1286I	GDGCHC	5 cut(s)	296, 750, 948, 986, 1030
Bsp143I	GATC	3 cut(s)	258, 699, 792
Bsp1720I	GCTNAGC	1 cut(s)	995
Bsp68I	TCGCGA	1 cut(s)	162
BspACI	CCGC	7 cut(s)	183, 313, 450, 499, 547, 586, 954
BspANI	GGCC	7 cut(s)	110, 391, 480, 498, 543, 631, 941
BspCNI	CTCAG	2 cut(s)	268, 987
BspFNI	CGCG	5 cut(s)	162, 501, 549, 588, 646
BspLI	GGNNCC	2 cut(s)	632, 842
BspMAI	CTGCAG	1 cut(s)	694
BspMI	ACCTGC	2 cut(s)	852, 967
BspOI	GCTAGC	1 cut(s)	284
BspPI	GGATC	1 cut(s)	253
BspTNI	GGTCTC	1 cut(s)	602
BsrFI	RCCGGY	1 cut(s)	539
BsrI	ACTGG	2 cut(s)	204, 392
BssAI	RCCGGY	1 cut(s)	539
BssHII	GCGCGC	1 cut(s)	644
BssMI	GATC	3 cut(s)	258, 699, 792
BssT1I	CCWWGG	4 cut(s)	252, 517, 619, 1143
Bst2UI	CCWGG	3 cut(s)	447, 579, 1158
Bst4CI	ACNGT	5 cut(s)	91, 226, 244, 530, 895
BstAPI	GCANNNNNTGC	1 cut(s)	332
BstC8I	GCNNGC	9 cut(s)	122, 282, 361, 370, 473, 646, 803, 900, 986
BstDEI	CTNAG	3 cut(s)	276, 482, 995
BstDSI	CCRYGG	1 cut(s)	336
BstF5I	GGATG	2 cut(s)	126, 1129
BstFNI	CGCG	5 cut(s)	162, 501, 549, 588, 646
BstH2I	RGCGCY	2 cut(s)	208, 674
BstHHI	GCGC	4 cut(s)	207, 646, 648, 673
BstKTI	GATC	3 cut(s)	261, 702, 795
BstMAI	GTCTC	3 cut(s)	427, 602, 738
BstMBI	GATC	3 cut(s)	258, 699, 792
BstMWI	GCNNNNNNNGC	7 cut(s)	159, 332, 356, 365, 369, 477, 895
BstNI	CCWGG	3 cut(s)	447, 579, 1158
BstPAI	GACNNNNGTC	1 cut(s)	730
BstSCI	CCNGG	9 cut(s)	38, 76, 445, 577, 775, 776, 948, 949, 1156
BstSFI	CTRYAG	1 cut(s)	690
BstSLI	GKGCMC	3 cut(s)	296, 948, 1030
BstUI	CGCG	5 cut(s)	162, 501, 549, 588, 646
BstV1I	GCAGC	4 cut(s)	676, 680, 704, 1029
BstV2I	GAAGAC	2 cut(s)	236, 405
BstX2I	RGATCY	1 cut(s)	258
BstYI	RGATCY	1 cut(s)	258
Bsu36I	CCTNAGG	1 cut(s)	482
BsuRI	GGCC	7 cut(s)	110, 391, 480, 498, 543, 631, 941
BtgI	CCRYGG	1 cut(s)	336
BtsCI	GGATG	2 cut(s)	126, 1129
BtsI	GCAGTG	1 cut(s)	1006
BtsIMutI	CAGTG	4 cut(s)	222, 249, 1006, 1028
BtuMI	TCGCGA	1 cut(s)	162
BveI	ACCTGC	2 cut(s)	852, 967
Cac8I	GCNNGC	9 cut(s)	122, 282, 361, 370, 473, 646, 803, 900, 986
CfoI	GCGC	4 cut(s)	207, 646, 648, 673
Cfr10I	RCCGGY	1 cut(s)	539
Cfr13I	GGNCC	5 cut(s)	630, 841, 939, 956, 1154
Cfr9I	CCCGGG	2 cut(s)	776, 949
CseI	GACGC	2 cut(s)	490, 577
CspCI	CAANNNNNGTGG	2 cut(s)	601, 636
CviAII	CATG	2 cut(s)	505, 742
DdeI	CTNAG	3 cut(s)	276, 482, 995
DpnI	GATC	3 cut(s)	260, 701, 794
DpnII	GATC	3 cut(s)	258, 699, 792
DrdI	GACNNNNNNGTC	1 cut(s)	143
DseDI	GACNNNNNNGTC	1 cut(s)	143
EaeI	YGGCCR	1 cut(s)	496
EciI	GGCGGA	1 cut(s)	969
Ecl136II	GAGCTC	1 cut(s)	748
Eco130I	CCWWGG	4 cut(s)	252, 517, 619, 1143
Eco147I	AGGCCT	1 cut(s)	110
Eco24I	GRGCYC	1 cut(s)	750
Eco31I	GGTCTC	1 cut(s)	602
Eco47I	GGWCC	3 cut(s)	841, 956, 1154
Eco47III	AGCGCT	1 cut(s)	672
Eco53kI	GAGCTC	1 cut(s)	748
Eco57I	CTGAAG	3 cut(s)	610, 935, 1010
Eco81I	CCTNAGG	1 cut(s)	482
Eco88I	CYCGRG	3 cut(s)	115, 776, 949
EcoICRI	GAGCTC	1 cut(s)	748
EcoO109I	RGGNCCY	2 cut(s)	630, 841
EcoRII	CCWGG	3 cut(s)	445, 577, 1156
EcoT14I	CCWWGG	4 cut(s)	252, 517, 619, 1143
EcoT38I	GRGCYC	1 cut(s)	750
ErhI	CCWWGG	4 cut(s)	252, 517, 619, 1143
Esp3I	CGTCTC	1 cut(s)	427
FaeI	CATG	2 cut(s)	508, 745
FaiI	YATR	9 cut(s)	66, 506, 563, 743, 786, 869, 1041, 1071, 1085
FalI	AAGNNNNNCTT	2 cut(s)	348, 380
FaqI	GGGAC	4 cut(s)	695, 793, 854, 1149
FatI	CATG	2 cut(s)	504, 741
FbaI	TGATCA	1 cut(s)	699
FblI	GTMKAC	1 cut(s)	417
FokI	GGATG	2 cut(s)	113, 1136
FriOI	GRGCYC	1 cut(s)	750
FspBI	CTAG	5 cut(s)	234, 263, 281, 518, 1195
GlaI	GCGC	4 cut(s)	206, 645, 647, 672
GsuI	CTGGAG	2 cut(s)	221, 1031
HaeII	RGCGCY	2 cut(s)	208, 674
HaeIII	GGCC	7 cut(s)	110, 391, 480, 498, 543, 631, 941
HapII	CCGG	5 cut(s)	39, 77, 540, 777, 950
HgaI	GACGC	2 cut(s)	490, 577
HhaI	GCGC	4 cut(s)	207, 646, 648, 673
Hin1II	CATG	2 cut(s)	508, 745
Hin6I	GCGC	4 cut(s)	205, 644, 646, 671
HinP1I	GCGC	4 cut(s)	205, 644, 646, 671
HindIII	AAGCTT	1 cut(s)	830
HinfI	GANTC	4 cut(s)	441, 731, 781, 964
HpaII	CCGG	5 cut(s)	39, 77, 540, 777, 950
HphI	GGTGA	1 cut(s)	529
Hpy166II	GTNNAC	2 cut(s)	418, 946
Hpy188I	TCNGA	4 cut(s)	440, 607, 811, 969
Hpy188III	TCNNGA	4 cut(s)	13, 115, 134, 161
Hpy8I	GTNNAC	2 cut(s)	418, 946
Hpy99I	CGWCG	1 cut(s)	800
HpyAV	CCTTC	9 cut(s)	76, 121, 381, 809, 831, 1017, 1105, 1166, 1193
HpyCH4III	ACNGT	5 cut(s)	91, 226, 244, 530, 895
HpyCH4IV	ACGT	2 cut(s)	420, 1047
HpyCH4V	TGCA	7 cut(s)	98, 213, 372, 692, 882, 946, 1017
HpyF10VI	GCNNNNNNNGC	7 cut(s)	159, 332, 356, 365, 369, 477, 895
HpyF3I	CTNAG	3 cut(s)	276, 482, 995
HpySE526I	ACGT	2 cut(s)	420, 1047
Hsp92II	CATG	2 cut(s)	508, 745
HspAI	GCGC	4 cut(s)	205, 644, 646, 671
Ksp22I	TGATCA	1 cut(s)	699
Kzo9I	GATC	3 cut(s)	258, 699, 792
LmnI	GCTCC	4 cut(s)	73, 202, 686, 745
Lsp1109I	GCAGC	4 cut(s)	676, 680, 704, 1029
LweI	GCATC	2 cut(s)	169, 381
MaeI	CTAG	5 cut(s)	234, 263, 281, 518, 1195
MaeII	ACGT	2 cut(s)	420, 1047
MaeIII	GTNAC	2 cut(s)	524, 535
MalI	GATC	3 cut(s)	260, 701, 794
MboI	GATC	3 cut(s)	258, 699, 792
MboII	GAAGA	7 cut(s)	27, 188, 241, 410, 928, 1117, 1120
MflI	RGATCY	1 cut(s)	258
MhlI	GDGCHC	5 cut(s)	296, 750, 948, 986, 1030
MluCI	AATT	1 cut(s)	855
MlyI	GAGTC	3 cut(s)	435, 740, 775
MmeI	TCCRAC	2 cut(s)	333, 789
MroXI	GAANNNNTTC	2 cut(s)	920, 1176
MseI	TTAA	1 cut(s)	822
MslI	CAYNNNNRTG	2 cut(s)	224, 245
MspA1I	CMGCKG	2 cut(s)	313, 695
MspI	CCGG	5 cut(s)	39, 77, 540, 777, 950
MspR9I	CCNGG	9 cut(s)	40, 78, 447, 579, 777, 778, 950, 951, 1158
Mva1269I	GAATGC	1 cut(s)	1176
MvaI	CCWGG	3 cut(s)	447, 579, 1158
MvnI	CGCG	5 cut(s)	162, 501, 549, 588, 646
MwoI	GCNNNNNNNGC	7 cut(s)	159, 332, 356, 365, 369, 477, 895
NciI	CCSGG	6 cut(s)	40, 78, 777, 778, 950, 951
NdeII	GATC	3 cut(s)	258, 699, 792
NheI	GCTAGC	1 cut(s)	280
NlaIII	CATG	2 cut(s)	508, 745
NlaIV	GGNNCC	2 cut(s)	632, 842
NmeAIII	GCCGAG	1 cut(s)	456
NmuCI	GTSAC	1 cut(s)	535
NruI	TCGCGA	1 cut(s)	162
OliI	CACNNNNGTG	1 cut(s)	224
PalAI	GGCGCGCC	1 cut(s)	644
PauI	GCGCGC	1 cut(s)	644
PceI	AGGCCT	1 cut(s)	110
PctI	GAATGC	1 cut(s)	1176
PdmI	GAANNNNTTC	2 cut(s)	920, 1176
PfeI	GAWTC	1 cut(s)	964
PleI	GAGTC	3 cut(s)	435, 739, 775
PpsI	GAGTC	3 cut(s)	435, 739, 775
PpuMI	RGGWCCY	1 cut(s)	841
PshAI	GACNNNNGTC	1 cut(s)	730
Psp124BI	GAGCTC	1 cut(s)	750
Psp5II	RGGWCCY	1 cut(s)	841
Psp6I	CCWGG	3 cut(s)	445, 577, 1156
PspGI	CCWGG	3 cut(s)	445, 577, 1156
PspN4I	GGNNCC	2 cut(s)	632, 842
PspPI	GGNCC	5 cut(s)	630, 841, 939, 956, 1154
PspPPI	RGGWCCY	1 cut(s)	841
PstI	CTGCAG	1 cut(s)	694
PsuI	RGATCY	1 cut(s)	258
PteI	GCGCGC	1 cut(s)	644
PvuII	CAGCTG	1 cut(s)	695
RruI	TCGCGA	1 cut(s)	162
RseI	CAYNNNNRTG	2 cut(s)	224, 245
SacI	GAGCTC	1 cut(s)	750
SaqAI	TTAA	1 cut(s)	822
Sau3AI	GATC	3 cut(s)	258, 699, 792
Sau96I	GGNCC	5 cut(s)	630, 841, 939, 956, 1154
SchI	GAGTC	3 cut(s)	435, 740, 775
ScrFI	CCNGG	9 cut(s)	40, 78, 447, 579, 777, 778, 950, 951, 1158
SduI	GDGCHC	5 cut(s)	296, 750, 948, 986, 1030
SfaNI	GCATC	2 cut(s)	169, 381
SfcI	CTRYAG	1 cut(s)	690
SgsI	GGCGCGCC	1 cut(s)	644
SinI	GGWCC	3 cut(s)	841, 956, 1154
SmaI	CCCGGG	2 cut(s)	778, 951
SmiMI	CAYNNNNRTG	2 cut(s)	224, 245
SmlI	CTYRAG	3 cut(s)	132, 427, 466
SmoI	CTYRAG	3 cut(s)	132, 427, 466
Sse9I	AATT	1 cut(s)	855
SseBI	AGGCCT	1 cut(s)	110
SsiI	CCGC	7 cut(s)	183, 313, 450, 499, 547, 586, 954
SspMI	CTAG	5 cut(s)	234, 263, 281, 518, 1195
SstI	GAGCTC	1 cut(s)	750
StuI	AGGCCT	1 cut(s)	110
StyD4I	CCNGG	9 cut(s)	38, 76, 445, 577, 775, 776, 948, 949, 1156
StyI	CCWWGG	4 cut(s)	252, 517, 619, 1143
TaaI	ACNGT	5 cut(s)	91, 226, 244, 530, 895
TaiI	ACGT	2 cut(s)	423, 1050
TaqI	TCGA	4 cut(s)	5, 12, 147, 795
TasI	AATT	1 cut(s)	855
TauI	GCSGC	5 cut(s)	185, 316, 453, 501, 588
TfiI	GAWTC	1 cut(s)	964
Tru1I	TTAA	1 cut(s)	822
Tru9I	TTAA	1 cut(s)	822
TscAI	CASTG	4 cut(s)	229, 249, 1006, 1035
TseFI	GTSAC	1 cut(s)	535
TseI	GCWGC	5 cut(s)	668, 689, 692, 1017, 1188
Tsp45I	GTSAC	1 cut(s)	535
TspDTI	ATGAA	1 cut(s)	730
TspGWI	ACGGA	1 cut(s)	699
TspMI	CCCGGG	2 cut(s)	776, 949
TspRI	CASTG	4 cut(s)	229, 249, 1006, 1035
VneI	GTGCAC	1 cut(s)	944
VpaK11BI	GGWCC	3 cut(s)	841, 956, 1154
XmaI	CCCGGG	2 cut(s)	776, 949
XmaJI	CCTAGG	1 cut(s)	517
XmiI	GTMKAC	1 cut(s)	417
XmnI	GAANNNNTTC	2 cut(s)	920, 1176
XspI	CTAG	5 cut(s)	234, 263, 281, 518, 1195

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.