Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0012948

Physical Location & Seq

Genomic Coordinates Forward (+)

7482523 .. 7484042

Gene Structure 1520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g08120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGTCGAAGGTCGAGAGAAACGGCACTAATGGTTCTTCCGGGCAATATCGTTCCCCATGTAGGTATGCTCCTACCCCGGGGAAGGCAACCATCCTTGCATTGGGCAAGGCCTTCCCGAGCCAGCTCATCCCTCAAGACTGCTTGGTCGAGGGCTACATTCGCGATACAAAATGTGAAGACGCCGCCATCAAGGAGAAACTGGAGCGCCTGTGCAAAACCACCACTGTGAAGACTAGGTACACAGTGATGTCCAAGGAGATCCTAGACAAATACCCTGAGCTAGCAACAGAGGGCACAGCCACCATCAAACAGCGGCTTGAAATTGCAAACCCTGCGGTGGTGGAGATGGCGTTGGAAGCCAGCCTTGCTTGCATCAAGGAATGGGGAAGGCCAGTTGAAGACATCACTCACATTGTCTACGTCTCCTCAAGTGAAATCAGACTCCCAGGCGGCGACCTCTACCTCTCAAGCAAGCTAGGCCTAAGGAACGATGTTGGCCGCGTCATGCTCTACTTCCTAGGCTGCTACGGTGGTGTCAGCGGCCTCCGCGTTGCCAAAGACATAGCTGAAAACAACCCTGGAAGCCGCGTCTTGCTAACCACTTCCGAGACCACGATCGATCTTGGCTTCAGGCCCCCCAACAAGGCGCGCCCTTACGACCTTGTAGGGGCAGCGCTATTCGGGGATGGAGCTGCAGCTGTGATCATTGGAAGCAACCCAATAGCAGGACAAGAGTCTCCTTTCATGGAGCTCAACTACGCCGTCCAGCAGTTCCTCCCTGGGACTCACAATGTGATAGACGGCAGGCTGTCGGAGGAAGGCATTAACTTCAAGCTTGGAAGGGACCTGCCCCAGAAAATTGACGAGAACATAGAGGAGTTTTGCAAGAAGCTGACCGTGCCGGCGAAAGCAGAGCTGAAGAACTTCAACGAGCTGTTTTGGGCCGTGCACCCGGGTGGACCGGCGATTCTGAACAAGATGGAGAGCACGCTGAAGCTGAGTAGTGATAAGCTGGAGTGCAGCAGAAGGGCACTGATGGACTATGGGAACGTGAGCAGCAACACCATTTTTTATGTGATGGAAAATATGAGGGAAGAGTTGAAGTTGAAGAAGAAGGAGGGGAGGGATGAGGAATGGGGACTTGCCTTGGCATTTGGGCCTGGGATTACTTTTGAAGGCATTCTCCTTCGCAGCCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0012505 GO:0016043 GO:0016740 GO:0016746 GO:0016747 GO:0019438 GO:0019748 GO:0022607 GO:0030198 GO:0030638 GO:0030639 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0071704 GO:0071840 GO:0080110 GO:0085029 GO:0090439 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chal_sti_synt_C Chal_sti_synt_N

Protein Analysis

400

Amino Acids

43.92

Weight (kDa)

6.42

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chal_sti_synt_N	PF00195	26 - 240	1.9e-106	Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C	PF02797	250 - 399	7e-65	Chalcone and stilbene synthases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02050 AT4G00040
fragaria_vesca	FvH4_7g09471
malus_domestica	MD07G1098500.v1.1
prunus_persica	Prupe.2G122600_v2.0.a1
pyrus_communis	pycom07g08120
rosa_chinensis	RchiOBHm_Chr1g0346291
rosa_laevigata	RLG00000028808
rosa_multiflora	Rmu_co8385307.1_g000001 Rmu_sc0003363.1_g000039 Rmu_sc0003809.1_g000039
rosa_roxburghii	Rroxscaffold_4G00308760
rosa_rugosa	Rorug01G0178800
rosa_samantha	Rh1AG198200 Rh1BG164300 Rh1CG183500 Rh1DG195000
rosa_wichuraiana	Rw1G016660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	143
Acc36I	ACCTGC	1 cut(s)	855
AccI	GTMKAC	1 cut(s)	417
AccII	CGCG	5 cut(s)	162, 501, 549, 588, 649
AciI	CCGC	8 cut(s)	183, 313, 335, 450, 499, 540, 547, 586
AclWI	GGATC	1 cut(s)	253
AcoI	YGGCCR	1 cut(s)	496
AcuI	CTGAAG	3 cut(s)	613, 938, 1013
AcyI	GRCGYC	1 cut(s)	180
AdeI	CACNNNGTG	1 cut(s)	793
AfaI	GTAC	1 cut(s)	239
AfeI	AGCGCT	1 cut(s)	675
AfiI	CCNNNNNNNGG	8 cut(s)	60, 77, 82, 100, 337, 643, 667, 725
AgsI	TTSAA	7 cut(s)	320, 398, 832, 928, 1102, 1108, 1175
AjnI	CCWGG	4 cut(s)	445, 577, 778, 1159
AleI	CACNNNNGTG	2 cut(s)	224, 954
Alw21I	GWGCWC	3 cut(s)	753, 951, 989
Alw26I	GTCTC	3 cut(s)	427, 602, 741
Alw44I	GTGCAC	1 cut(s)	947
AlwI	GGATC	1 cut(s)	253
Ama87I	CYCGRG	3 cut(s)	76, 115, 952
Aor51HI	AGCGCT	1 cut(s)	675
AoxI	GGCC	8 cut(s)	108, 389, 478, 496, 541, 632, 942, 1157
ApaLI	GTGCAC	1 cut(s)	947
ApeKI	GCWGC	7 cut(s)	522, 671, 692, 695, 1020, 1056, 1191
AscI	GGCGCGCC	1 cut(s)	647
Asp700I	GAANNNNTTC	2 cut(s)	923, 1179
AspA2I	CCTAGG	1 cut(s)	517
AspLEI	GCGC	4 cut(s)	207, 649, 651, 676
AspS9I	GGNCC	5 cut(s)	633, 844, 942, 959, 1157
AsuC2I	CCSGG	5 cut(s)	40, 77, 78, 953, 954
AsuNHI	GCTAGC	1 cut(s)	280
AvaI	CYCGRG	3 cut(s)	76, 115, 952
AvaII	GGWCC	2 cut(s)	844, 959
AvrII	CCTAGG	1 cut(s)	517
AxyI	CCTNAGG	1 cut(s)	482
BaeGI	GKGCMC	3 cut(s)	296, 951, 1033
BanII	GRGCYC	1 cut(s)	753
BarI	GAAGNNNNNNTAC	2 cut(s)	221, 253
BbsI	GAAGAC	3 cut(s)	183, 236, 405
Bbv12I	GWGCWC	3 cut(s)	753, 951, 989
BbvI	GCAGC	6 cut(s)	509, 679, 683, 707, 1032, 1068
BccI	CCATC	8 cut(s)	98, 194, 311, 340, 680, 973, 1030, 1072
BceAI	ACGGC	4 cut(s)	37, 746, 817, 929
BciT130I	CCWGG	4 cut(s)	447, 579, 780, 1161
BclI	TGATCA	1 cut(s)	702
BcnI	CCSGG	5 cut(s)	40, 77, 78, 953, 954
BcoDI	GTCTC	3 cut(s)	427, 602, 741
BfaI	CTAG	6 cut(s)	234, 263, 281, 476, 518, 1198
BfmI	CTRYAG	1 cut(s)	693
BfoI	RGCGCY	2 cut(s)	208, 677
BfuAI	ACCTGC	1 cut(s)	855
BlnI	CCTAGG	1 cut(s)	517
Bme1390I	CCNGG	9 cut(s)	40, 77, 78, 447, 579, 780, 953, 954, 1161
Bme18I	GGWCC	2 cut(s)	844, 959
BmeT110I	CYCGRG	3 cut(s)	76, 115, 952
BmgT120I	GGNCC	5 cut(s)	633, 844, 942, 959, 1157
BmiI	GGNNCC	2 cut(s)	635, 845
BmrFI	CCNGG	9 cut(s)	40, 77, 78, 447, 579, 780, 953, 954, 1161
BmsI	GCATC	1 cut(s)	381
BmtI	GCTAGC	1 cut(s)	284
BoxI	GACNNNNGTC	1 cut(s)	733
BpiI	GAAGAC	3 cut(s)	183, 236, 405
BpmI	CTGGAG	2 cut(s)	221, 1034
Bpu10I	CCTNAGC	1 cut(s)	276
BpuEI	CTTGAG	3 cut(s)	117, 412, 451
BpuMI	CCSGG	5 cut(s)	40, 77, 78, 953, 954
Bsa29I	ATCGAT	1 cut(s)	618
BsaHI	GRCGYC	1 cut(s)	180
BsaI	GGTCTC	1 cut(s)	602
BsaXI	ACNNNNNCTCC	4 cut(s)	194, 224, 335, 365
Bsc4I	CCNNNNNNNGG	8 cut(s)	60, 77, 82, 100, 337, 643, 667, 725
Bse118I	RCCGGY	2 cut(s)	901, 961
Bse1I	ACTGG	2 cut(s)	204, 392
Bse21I	CCTNAGG	1 cut(s)	482
BseBI	CCWGG	4 cut(s)	447, 579, 780, 1161
BseCI	ATCGAT	1 cut(s)	618
BseGI	GGATG	4 cut(s)	90, 126, 691, 1132
BseLI	CCNNNNNNNGG	8 cut(s)	60, 77, 82, 100, 337, 643, 667, 725
BseMII	CTCAG	2 cut(s)	267, 989
BseNI	ACTGG	2 cut(s)	204, 392
BsePI	GCGCGC	1 cut(s)	647
BseRI	GAGGAG	2 cut(s)	415, 890
BseSI	GKGCMC	3 cut(s)	296, 951, 1033
BseXI	GCAGC	6 cut(s)	509, 679, 683, 707, 1032, 1068
BsgI	GTGCAG	1 cut(s)	1039
Bsh1236I	CGCG	5 cut(s)	162, 501, 549, 588, 649
Bsh1285I	CGRYCG	1 cut(s)	618
BshFI	GGCC	8 cut(s)	110, 391, 480, 498, 543, 634, 944, 1159
BshVI	ATCGAT	1 cut(s)	618
BsiEI	CGRYCG	1 cut(s)	618
BsiHKAI	GWGCWC	3 cut(s)	753, 951, 989
BsiHKCI	CYCGRG	3 cut(s)	76, 115, 952
BsiSI	CCGG	5 cut(s)	39, 77, 902, 953, 962
BslFI	GGGAC	3 cut(s)	796, 857, 1152
BslI	CCNNNNNNNGG	8 cut(s)	60, 77, 82, 100, 337, 643, 667, 725
BsmAI	GTCTC	3 cut(s)	427, 602, 741
BsmBI	CGTCTC	1 cut(s)	427
BsmFI	GGGAC	3 cut(s)	796, 857, 1152
BsmI	GAATGC	1 cut(s)	1179
BsnI	GGCC	8 cut(s)	110, 391, 480, 498, 543, 634, 944, 1159
Bso31I	GGTCTC	1 cut(s)	602
BsoBI	CYCGRG	3 cut(s)	76, 115, 952
Bsp1286I	GDGCHC	5 cut(s)	296, 753, 951, 989, 1033
Bsp143I	GATC	4 cut(s)	258, 615, 619, 702
Bsp68I	TCGCGA	1 cut(s)	162
BspACI	CCGC	8 cut(s)	183, 313, 335, 450, 499, 540, 547, 586
BspANI	GGCC	8 cut(s)	110, 391, 480, 498, 543, 634, 944, 1159
BspCNI	CTCAG	2 cut(s)	268, 990
BspDI	ATCGAT	1 cut(s)	618
BspFNI	CGCG	5 cut(s)	162, 501, 549, 588, 649
BspLI	GGNNCC	2 cut(s)	635, 845
BspMAI	CTGCAG	1 cut(s)	697
BspMI	ACCTGC	1 cut(s)	855
BspOI	GCTAGC	1 cut(s)	284
BspPI	GGATC	1 cut(s)	253
BspTNI	GGTCTC	1 cut(s)	602
BsrFI	RCCGGY	2 cut(s)	901, 961
BsrI	ACTGG	2 cut(s)	204, 392
BssAI	RCCGGY	2 cut(s)	901, 961
BssHII	GCGCGC	1 cut(s)	647
BssMI	GATC	4 cut(s)	258, 615, 619, 702
BssNI	GRCGYC	1 cut(s)	180
BssT1I	CCWWGG	3 cut(s)	252, 517, 1146
Bst2UI	CCWGG	4 cut(s)	447, 579, 780, 1161
Bst4CI	ACNGT	4 cut(s)	226, 244, 530, 898
Bst6I	CTCTTC	1 cut(s)	1089
BstACI	GRCGYC	1 cut(s)	180
BstAPI	GCANNNNNTGC	1 cut(s)	332
BstC8I	GCNNGC	9 cut(s)	122, 282, 361, 370, 473, 649, 806, 903, 989
BstDEI	CTNAG	3 cut(s)	276, 482, 998
BstF5I	GGATG	4 cut(s)	90, 126, 691, 1132
BstFNI	CGCG	5 cut(s)	162, 501, 549, 588, 649
BstH2I	RGCGCY	2 cut(s)	208, 677
BstHHI	GCGC	4 cut(s)	207, 649, 651, 676
BstKTI	GATC	4 cut(s)	261, 618, 622, 705
BstMAI	GTCTC	3 cut(s)	427, 602, 741
BstMBI	GATC	4 cut(s)	258, 615, 619, 702
BstMCI	CGRYCG	1 cut(s)	618
BstMWI	GCNNNNNNNGC	8 cut(s)	159, 332, 356, 365, 369, 477, 546, 898
BstNI	CCWGG	4 cut(s)	447, 579, 780, 1161
BstPAI	GACNNNNGTC	1 cut(s)	733
BstSCI	CCNGG	9 cut(s)	38, 75, 76, 445, 577, 778, 951, 952, 1159
BstSFI	CTRYAG	1 cut(s)	693
BstSLI	GKGCMC	3 cut(s)	296, 951, 1033
BstUI	CGCG	5 cut(s)	162, 501, 549, 588, 649
BstV1I	GCAGC	6 cut(s)	509, 679, 683, 707, 1032, 1068
BstV2I	GAAGAC	3 cut(s)	183, 236, 405
BstX2I	RGATCY	1 cut(s)	258
BstYI	RGATCY	1 cut(s)	258
Bsu15I	ATCGAT	1 cut(s)	618
Bsu36I	CCTNAGG	1 cut(s)	482
BsuRI	GGCC	8 cut(s)	110, 391, 480, 498, 543, 634, 944, 1159
BsuTUI	ATCGAT	1 cut(s)	618
BtsCI	GGATG	4 cut(s)	90, 126, 691, 1132
BtsIMutI	CAGTG	3 cut(s)	222, 249, 1031
BtuMI	TCGCGA	1 cut(s)	162
BveI	ACCTGC	1 cut(s)	855
Cac8I	GCNNGC	9 cut(s)	122, 282, 361, 370, 473, 649, 806, 903, 989
CfoI	GCGC	4 cut(s)	207, 649, 651, 676
Cfr10I	RCCGGY	2 cut(s)	901, 961
Cfr13I	GGNCC	5 cut(s)	633, 844, 942, 959, 1157
Cfr9I	CCCGGG	2 cut(s)	76, 952
ClaI	ATCGAT	1 cut(s)	618
CseI	GACGC	3 cut(s)	188, 490, 577
Csp6I	GTAC	1 cut(s)	238
CviAII	CATG	3 cut(s)	57, 505, 745
CviQI	GTAC	1 cut(s)	238
DdeI	CTNAG	3 cut(s)	276, 482, 998
DpnI	GATC	4 cut(s)	260, 617, 621, 704
DpnII	GATC	4 cut(s)	258, 615, 619, 702
DraIII	CACNNNGTG	1 cut(s)	793
DrdI	GACNNNNNNGTC	1 cut(s)	143
DseDI	GACNNNNNNGTC	1 cut(s)	143
EaeI	YGGCCR	1 cut(s)	496
Eam1104I	CTCTTC	1 cut(s)	1089
EarI	CTCTTC	1 cut(s)	1089
Ecl136II	GAGCTC	1 cut(s)	751
Eco130I	CCWWGG	3 cut(s)	252, 517, 1146
Eco147I	AGGCCT	2 cut(s)	110, 480
Eco24I	GRGCYC	1 cut(s)	753
Eco31I	GGTCTC	1 cut(s)	602
Eco47I	GGWCC	2 cut(s)	844, 959
Eco47III	AGCGCT	1 cut(s)	675
Eco53kI	GAGCTC	1 cut(s)	751
Eco57I	CTGAAG	3 cut(s)	613, 938, 1013
Eco81I	CCTNAGG	1 cut(s)	482
Eco88I	CYCGRG	3 cut(s)	76, 115, 952
EcoICRI	GAGCTC	1 cut(s)	751
EcoO109I	RGGNCCY	2 cut(s)	633, 844
EcoRII	CCWGG	4 cut(s)	445, 577, 778, 1159
EcoT14I	CCWWGG	3 cut(s)	252, 517, 1146
EcoT38I	GRGCYC	1 cut(s)	753
ErhI	CCWWGG	3 cut(s)	252, 517, 1146
Esp3I	CGTCTC	1 cut(s)	427
FaeI	CATG	3 cut(s)	60, 508, 748
FaiI	YATR	9 cut(s)	58, 66, 506, 563, 746, 872, 1044, 1074, 1088
FalI	AAGNNNNNCTT	2 cut(s)	348, 380
FaqI	GGGAC	3 cut(s)	796, 857, 1152
FatI	CATG	3 cut(s)	56, 504, 744
FbaI	TGATCA	1 cut(s)	702
FblI	GTMKAC	1 cut(s)	417
FokI	GGATG	4 cut(s)	77, 113, 698, 1139
FriOI	GRGCYC	1 cut(s)	753
FspBI	CTAG	6 cut(s)	234, 263, 281, 476, 518, 1198
GlaI	GCGC	4 cut(s)	206, 648, 650, 675
GsuI	CTGGAG	2 cut(s)	221, 1034
HaeII	RGCGCY	2 cut(s)	208, 677
HaeIII	GGCC	8 cut(s)	110, 391, 480, 498, 543, 634, 944, 1159
HapII	CCGG	5 cut(s)	39, 77, 902, 953, 962
HgaI	GACGC	3 cut(s)	188, 490, 577
HhaI	GCGC	4 cut(s)	207, 649, 651, 676
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	3 cut(s)	60, 508, 748
Hin6I	GCGC	4 cut(s)	205, 647, 649, 674
HinP1I	GCGC	4 cut(s)	205, 647, 649, 674
HindIII	AAGCTT	1 cut(s)	833
HinfI	GANTC	4 cut(s)	441, 734, 784, 967
HpaII	CCGG	5 cut(s)	39, 77, 902, 953, 962
Hpy166II	GTNNAC	4 cut(s)	240, 418, 949, 959
Hpy188I	TCNGA	4 cut(s)	440, 607, 814, 972
Hpy188III	TCNNGA	4 cut(s)	13, 115, 134, 161
Hpy8I	GTNNAC	4 cut(s)	240, 418, 949, 959
HpyAV	CCTTC	9 cut(s)	76, 121, 381, 812, 834, 1020, 1108, 1169, 1196
HpyCH4III	ACNGT	4 cut(s)	226, 244, 530, 898
HpyCH4IV	ACGT	2 cut(s)	420, 1050
HpyCH4V	TGCA	8 cut(s)	98, 213, 326, 372, 695, 885, 949, 1020
HpyF10VI	GCNNNNNNNGC	8 cut(s)	159, 332, 356, 365, 369, 477, 546, 898
HpyF3I	CTNAG	3 cut(s)	276, 482, 998
HpySE526I	ACGT	2 cut(s)	420, 1050
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	3 cut(s)	60, 508, 748
HspAI	GCGC	4 cut(s)	205, 647, 649, 674
KroI	GCCGGC	1 cut(s)	901
KroNI	GCCGGC	1 cut(s)	903
Ksp22I	TGATCA	1 cut(s)	702
Kzo9I	GATC	4 cut(s)	258, 615, 619, 702
LmnI	GCTCC	4 cut(s)	73, 202, 689, 748
Lsp1109I	GCAGC	6 cut(s)	509, 679, 683, 707, 1032, 1068
LweI	GCATC	1 cut(s)	381
MaeI	CTAG	6 cut(s)	234, 263, 281, 476, 518, 1198
MaeII	ACGT	2 cut(s)	420, 1050
MalI	GATC	4 cut(s)	260, 617, 621, 704
MboI	GATC	4 cut(s)	258, 615, 619, 702
MboII	GAAGA	8 cut(s)	27, 188, 241, 410, 931, 1106, 1120, 1123
MflI	RGATCY	1 cut(s)	258
MhlI	GDGCHC	5 cut(s)	296, 753, 951, 989, 1033
MluCI	AATT	2 cut(s)	321, 858
MlyI	GAGTC	3 cut(s)	435, 743, 778
MmeI	TCCRAC	2 cut(s)	333, 792
MroNI	GCCGGC	1 cut(s)	901
MroXI	GAANNNNTTC	2 cut(s)	923, 1179
MseI	TTAA	1 cut(s)	825
MslI	CAYNNNNRTG	3 cut(s)	224, 245, 954
MspA1I	CMGCKG	3 cut(s)	313, 540, 698
MspI	CCGG	5 cut(s)	39, 77, 902, 953, 962
MspR9I	CCNGG	9 cut(s)	40, 77, 78, 447, 579, 780, 953, 954, 1161
Mva1269I	GAATGC	1 cut(s)	1179
MvaI	CCWGG	4 cut(s)	447, 579, 780, 1161
MvnI	CGCG	5 cut(s)	162, 501, 549, 588, 649
MwoI	GCNNNNNNNGC	8 cut(s)	159, 332, 356, 365, 369, 477, 546, 898
NaeI	GCCGGC	1 cut(s)	903
NciI	CCSGG	5 cut(s)	40, 77, 78, 953, 954
NdeII	GATC	4 cut(s)	258, 615, 619, 702
NgoMIV	GCCGGC	1 cut(s)	901
NheI	GCTAGC	1 cut(s)	280
NlaIII	CATG	3 cut(s)	60, 508, 748
NlaIV	GGNNCC	2 cut(s)	635, 845
NruI	TCGCGA	1 cut(s)	162
OliI	CACNNNNGTG	2 cut(s)	224, 954
PalAI	GGCGCGCC	1 cut(s)	647
PasI	CCCWGGG	1 cut(s)	779
PauI	GCGCGC	1 cut(s)	647
PceI	AGGCCT	2 cut(s)	110, 480
PctI	GAATGC	1 cut(s)	1179
PdiI	GCCGGC	1 cut(s)	903
PdmI	GAANNNNTTC	2 cut(s)	923, 1179
PfeI	GAWTC	1 cut(s)	967
Ple19I	CGATCG	1 cut(s)	618
PleI	GAGTC	3 cut(s)	435, 742, 778
PpsI	GAGTC	3 cut(s)	435, 742, 778
PpuMI	RGGWCCY	1 cut(s)	844
PshAI	GACNNNNGTC	1 cut(s)	733
Psp124BI	GAGCTC	1 cut(s)	753
Psp5II	RGGWCCY	1 cut(s)	844
Psp6I	CCWGG	4 cut(s)	445, 577, 778, 1159
PspGI	CCWGG	4 cut(s)	445, 577, 778, 1159
PspN4I	GGNNCC	2 cut(s)	635, 845
PspPI	GGNCC	5 cut(s)	633, 844, 942, 959, 1157
PspPPI	RGGWCCY	1 cut(s)	844
PstI	CTGCAG	1 cut(s)	697
PsuI	RGATCY	1 cut(s)	258
PteI	GCGCGC	1 cut(s)	647
PvuI	CGATCG	1 cut(s)	618
PvuII	CAGCTG	1 cut(s)	698
RruI	TCGCGA	1 cut(s)	162
RsaI	GTAC	1 cut(s)	239
RsaNI	GTAC	1 cut(s)	238
RseI	CAYNNNNRTG	3 cut(s)	224, 245, 954
SacI	GAGCTC	1 cut(s)	753
SaqAI	TTAA	1 cut(s)	825
Sau3AI	GATC	4 cut(s)	258, 615, 619, 702
Sau96I	GGNCC	5 cut(s)	633, 844, 942, 959, 1157
SchI	GAGTC	3 cut(s)	435, 743, 778
ScrFI	CCNGG	9 cut(s)	40, 77, 78, 447, 579, 780, 953, 954, 1161
SduI	GDGCHC	5 cut(s)	296, 753, 951, 989, 1033
SfaNI	GCATC	1 cut(s)	381
SfcI	CTRYAG	1 cut(s)	693
SgsI	GGCGCGCC	1 cut(s)	647
SinI	GGWCC	2 cut(s)	844, 959
SmaI	CCCGGG	2 cut(s)	78, 954
SmiMI	CAYNNNNRTG	3 cut(s)	224, 245, 954
SmlI	CTYRAG	3 cut(s)	132, 427, 466
SmoI	CTYRAG	3 cut(s)	132, 427, 466
Sse9I	AATT	2 cut(s)	321, 858
SseBI	AGGCCT	2 cut(s)	110, 480
SsiI	CCGC	8 cut(s)	183, 313, 335, 450, 499, 540, 547, 586
SspMI	CTAG	6 cut(s)	234, 263, 281, 476, 518, 1198
SstI	GAGCTC	1 cut(s)	753
StuI	AGGCCT	2 cut(s)	110, 480
StyD4I	CCNGG	9 cut(s)	38, 75, 76, 445, 577, 778, 951, 952, 1159
StyI	CCWWGG	3 cut(s)	252, 517, 1146
TaaI	ACNGT	4 cut(s)	226, 244, 530, 898
TaiI	ACGT	2 cut(s)	423, 1053
TaqI	TCGA	4 cut(s)	5, 12, 147, 618
TasI	AATT	2 cut(s)	321, 858
TauI	GCSGC	6 cut(s)	185, 316, 453, 501, 543, 588
TfiI	GAWTC	1 cut(s)	967
Tru1I	TTAA	1 cut(s)	825
Tru9I	TTAA	1 cut(s)	825
TscAI	CASTG	3 cut(s)	229, 249, 1038
TseI	GCWGC	7 cut(s)	522, 671, 692, 695, 1020, 1056, 1191
TspDTI	ATGAA	1 cut(s)	733
TspMI	CCCGGG	2 cut(s)	76, 952
TspRI	CASTG	3 cut(s)	229, 249, 1038
VneI	GTGCAC	1 cut(s)	947
VpaK11BI	GGWCC	2 cut(s)	844, 959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	97
XmaI	CCCGGG	2 cut(s)	76, 952
XmaJI	CCTAGG	1 cut(s)	517
XmiI	GTMKAC	1 cut(s)	417
XmnI	GAANNNNTTC	2 cut(s)	923, 1179
XspI	CTAG	6 cut(s)	234, 263, 281, 476, 518, 1198

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.