Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0012943

Physical Location & Seq

Genomic Coordinates Forward (+)

15138648 .. 15144046

Gene Structure 5399 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1121000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGCTCGAAACAAGGATGGTATGGTTTTGTTGATTGATGTTAGCCCGTCGATGCACAAAGCTCTTCCAGAGATCGAAAAAGTTTGCTCTATGCTAGTAGAGAAGAAGTTGATTTACAATAAATATGATGAAGTAGGAGCTGTATTGTTCGGAACCGAAGACACTGAAAACGAACTGACAACGGAAGTGGGTGGATACAAGCATGTAGTGGTTTTACAAAATATCAAAGTTGTTGATGGGCATCTTGTTGAAACTCTACAACAACTCCCACGAGGAACTCATGAGGGTGACTTTCTTGATGCCATAATTGTTGGGTTGGATATGCTGATCAAGAAATATGGAGAAACATACAAAGGAAAGAAACGCCTTTGTCTGATTACAAATGCACAATTTCCTACTAAATTTCCGCAAGAGGGTACTAAAGAAGAACAAGTCACCACCATTGCCGGTCACATGAATAAACATGGTATGAGAATGGAAAGCATTGTTGTGAGAGGAAAACTTACTGGGGAAGCTGATAAAAACATAATGGATGAGAATGATCATCTATTGGGTATATTTTCAAGGAAAACGTGTGCAAAGTTGGTACATGTTGAGAGTCCAACTTCATTGCTAGGTGCTCTTAGAACTCGAAAAATATCTCCAGTTACAATATTCAGGGGTGATCTTGAGCTTAGCCCCAAAATGAAGATTAAGGTATGGGTTTACAAGAAAACATCGGAAGAGAAGTTTCCCACTCTGAAGAAATATTCTGAGAAAGCGCCTCCAACAGATAGATTTGCTACACATGAAGTCAAGGTGGACTTTGAGTATAAAAGTGTTGAAGATCCTAGTAAAGTTGTGCCTCCTGACCAGAGGATTAAGGGTTATCGTTATGGCCCTCAAGTTATTCCCATATCATCTGCTGAATGGGATGCTGTCAAGTTCAAGCCAGAAAAGAGTGTGAAACTTCTGGGATTTTCTGATGCTAAAAATATAATGCGACATTATTACATGAAAGATGTCAATATTTTCATCCCTGAACCGGGTAATACGAGGGCCATTCTTGCTGTTTCTGCCCTAGCAAGAGCTATGAAAGATATGAATAAGGTGGCAATTATGCGCTGTGTTTGGAGACAAGGACAAGGAAATGTTGTTGTGGGGGTCTTAACACCTAATGTCTCGGACAATGACAATATCCCTGATTCATTTTACTTCAATGTACTCCCTTTTGCTGAGGATGTTAGGGAGTTTCAATTCCCATCTTTCAGTAACTTCCCGGAATCGTGGCAACCAAGTGAACAACAGCAAGAGGCTGCAGATGGCCTTGTCAAGATGCTTGACCTTGCACCACCTGGCAAAGAGGAGGCTCTGCTGCCTAGCTTAACCCCAAATCCTGTCCTTGAGCGCTTTTATCGTCACCTTGAGTTGAAGTCAAGGCAACCAGATGCAGTTGTACCTCCACTTGATGAAACTCTTAGGACGATTACTGAACCTGATAAAGAGCTTATTTCTCAAAACAAGTCTATTATTGATGTCTTTCATAGCCGGTTTGAACTCAAAGAGAACCCAAAGCTGAAGAAATCAAGTAGGCGATTTTTGCGAGATAAACCATCTGGGTCAAAGGAGGGGGAGGATCATCTTAGCATTACCGATGGACCTAATAAGGTTGAGAAAATTGGGGACACTACTCCTGTCCAGGATTTTGAAGCTATGATCAGTCGTAGAGATAGCCCAAAATGGGTTGGTAAAGCAATTAAGGATATGAAAAATAAAATACACGACTTAGTAGAGGACTCTTATGAAGGGGATAATTATTCAAAGGCATTGGAATGTTTAATTGCCCTCCGCAAGGGTTGTATCCTAGAGCAGGAACCAAAAGAGTTCAACGATTTCCTGTGCAATCTATGTAAATTCTGCGAGGAGAAAGCCCTTGGCAGTTTCTGTGGATTTCTTGCATCCAAGGAGCTCACGTTGATTCCCAAGAGAGAAGCTATAGACAGTGAAGTTACGGATGACGAAGCTAAAAGTTTTCTGGTCAAATCAGAGCCAAAATTGGAAGCAATGATTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0015074 GO:0016043 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03450 map03450

Pfam Domains

Protein Families

Ku Ku_C Ku_N Ku_PK_bind

Protein Analysis

685

Amino Acids

77.43

Weight (kDa)

6.35

Isoelectric Point (pI)

43.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ku_N	PF03731	8 - 134	4.3e-13	Ku70/Ku80 N-terminal alpha/beta domain
Ku	PF02735	227 - 431	1.4e-43	Ku70/Ku80 beta-barrel domain
Ku_C	PF03730	453 - 533	1.7e-06	Ku70/Ku80 C-terminal arm
Ku_PK_bind	PF08785	557 - 672	3.2e-36	Ku C terminal domain like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48050 AT1G48050 AT1G48050
fragaria_vesca	FvH4_7g11900 FvH4_7g11900
malus_domestica	MD07G1121000.v1.1
prunus_persica	Prupe.2G145600_v2.0.a1
pyrus_communis	pycom07g11020
rosa_chinensis	RchiOBHm_Chr1g0350581
rosa_laevigata	RLG00000028472
rosa_multiflora	Rmu_sc0009041.1_g000003
rosa_roxburghii	Rroxscaffold_4G00304720
rosa_rugosa	Rorug01G0212300
rosa_samantha	Rh1AG226800 Rh1BG195500 Rh1CG211600 Rh1DG223500
rosa_wichuraiana	Rw1G019600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	407, 1828
AclWI	GGATC	2 cut(s)	821, 1623
AcsI	RAATTY	2 cut(s)	401, 1892
AcuI	CTGAAG	2 cut(s)	761, 1577
AfaI	GTAC	4 cut(s)	418, 588, 1203, 1437
AfeI	AGCGCT	1 cut(s)	1388
AfiI	CCNNNNNNNGG	6 cut(s)	413, 1024, 1025, 1720, 1831, 1849
AflIII	ACRYGT	2 cut(s)	572, 589
AjnI	CCWGG	2 cut(s)	1333, 1677
Alw21I	GWGCWC	2 cut(s)	622, 1950
Alw26I	GTCTC	2 cut(s)	1108, 1165
AlwI	GGATC	2 cut(s)	821, 1623
AlwNI	CAGNNNCTG	1 cut(s)	1923
Aor51HI	AGCGCT	1 cut(s)	1388
AoxI	GGCC	3 cut(s)	877, 1038, 1303
ApeKI	GCWGC	2 cut(s)	1295, 1354
ApoI	RAATTY	2 cut(s)	401, 1892
AspLEI	GCGC	3 cut(s)	763, 1104, 1389
AspS9I	GGNCC	3 cut(s)	878, 1038, 1637
AsuC2I	CCSGG	2 cut(s)	1026, 1259
AsuHPI	GGTGA	4 cut(s)	299, 427, 674, 1391
AvaII	GGWCC	1 cut(s)	1637
BanII	GRGCYC	1 cut(s)	1950
BarI	GAAGNNNNNNTAC	2 cut(s)	98, 130
BauI	CACGAG	1 cut(s)	270
BbsI	GAAGAC	1 cut(s)	165
Bbv12I	GWGCWC	2 cut(s)	622, 1950
BbvCI	CCTCAGC	1 cut(s)	1215
BbvI	GCAGC	2 cut(s)	1282, 1341
BccI	CCATC	6 cut(s)	11, 230, 1249, 1295, 1600, 1628
BciT130I	CCWGG	2 cut(s)	1335, 1679
BciVI	GTATCC	2 cut(s)	188, 1850
BclI	TGATCA	3 cut(s)	327, 541, 1695
BcnI	CCSGG	2 cut(s)	1026, 1259
BcoDI	GTCTC	2 cut(s)	1108, 1165
BfaI	CTAG	6 cut(s)	95, 614, 831, 1061, 1359, 1844
BfmI	CTRYAG	2 cut(s)	1296, 1974
BfoI	RGCGCY	2 cut(s)	764, 1390
BfuI	GTATCC	2 cut(s)	188, 1850
BisI	GCNGC	2 cut(s)	1296, 1355
BlpI	GCTNAGC	1 cut(s)	674
BlsI	GCNGC	2 cut(s)	1297, 1356
Bme1390I	CCNGG	4 cut(s)	1026, 1259, 1335, 1679
Bme18I	GGWCC	1 cut(s)	1637
BmgT120I	GGNCC	3 cut(s)	878, 1038, 1637
BmiI	GGNNCC	2 cut(s)	154, 1854
BmrFI	CCNGG	4 cut(s)	1026, 1259, 1335, 1679
BmrI	ACTGGG	1 cut(s)	516
BmsI	GCATC	8 cut(s)	42, 250, 289, 904, 955, 1305, 1417, 1946
BmuI	ACTGGG	1 cut(s)	516
BpiI	GAAGAC	1 cut(s)	165
BpmI	CTGGAG	1 cut(s)	627
Bpu10I	CCTNAGC	1 cut(s)	1215
Bpu1102I	GCTNAGC	1 cut(s)	674
BpuEI	CTTGAG	4 cut(s)	689, 867, 1403, 1424
BpuMI	CCSGG	2 cut(s)	1026, 1259
BsaBI	GATNNNNATC	1 cut(s)	240
BsaJI	CCNNGG	2 cut(s)	1912, 1941
BsaXI	ACNNNNNCTCC	4 cut(s)	249, 279, 1937, 1967
Bsc4I	CCNNNNNNNGG	6 cut(s)	413, 1024, 1025, 1720, 1831, 1849
Bse118I	RCCGGY	2 cut(s)	446, 1527
Bse1I	ACTGG	2 cut(s)	511, 644
Bse3DI	GCAATG	3 cut(s)	441, 608, 2049
Bse8I	GATNNNNATC	1 cut(s)	240
BseBI	CCWGG	2 cut(s)	1335, 1679
BseDI	CCNNGG	2 cut(s)	1912, 1941
BseGI	GGATG	7 cut(s)	22, 538, 919, 1014, 1225, 1937, 1999
BseJI	GATNNNNATC	1 cut(s)	240
BseLI	CCNNNNNNNGG	6 cut(s)	413, 1024, 1025, 1720, 1831, 1849
BseMI	GCAATG	3 cut(s)	441, 608, 2049
BseMII	CTCAG	2 cut(s)	744, 1206
BseNI	ACTGG	2 cut(s)	511, 644
BseRI	GAGGAG	2 cut(s)	1358, 1916
BseXI	GCAGC	2 cut(s)	1282, 1341
BshFI	GGCC	3 cut(s)	879, 1040, 1305
BsiHKAI	GWGCWC	2 cut(s)	622, 1950
BsiSI	CCGG	4 cut(s)	447, 1025, 1259, 1528
BslFI	GGGAC	1 cut(s)	1676
BslI	CCNNNNNNNGG	6 cut(s)	413, 1024, 1025, 1720, 1831, 1849
BsmAI	GTCTC	2 cut(s)	1108, 1165
BsmFI	GGGAC	1 cut(s)	1676
BsnI	GGCC	3 cut(s)	879, 1040, 1305
Bsp1286I	GDGCHC	2 cut(s)	622, 1950
Bsp143I	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
Bsp1720I	GCTNAGC	1 cut(s)	674
BspACI	CCGC	2 cut(s)	407, 1828
BspANI	GGCC	3 cut(s)	879, 1040, 1305
BspCNI	CTCAG	2 cut(s)	745, 1207
BspHI	TCATGA	1 cut(s)	280
BspLI	GGNNCC	2 cut(s)	154, 1854
BspMAI	CTGCAG	1 cut(s)	1300
BspPI	GGATC	2 cut(s)	821, 1623
BspQI	GCTCTTC	1 cut(s)	69
BsrDI	GCAATG	3 cut(s)	441, 608, 2049
BsrFI	RCCGGY	2 cut(s)	446, 1527
BsrI	ACTGG	2 cut(s)	511, 644
BssAI	RCCGGY	2 cut(s)	446, 1527
BssECI	CCNNGG	2 cut(s)	1912, 1941
BssMI	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
BssSI	CACGAG	1 cut(s)	270
BssT1I	CCWWGG	2 cut(s)	1912, 1941
Bst2BI	CACGAG	1 cut(s)	270
Bst2UI	CCWGG	2 cut(s)	1335, 1679
Bst4CI	ACNGT	1 cut(s)	1982
Bst6I	CTCTTC	2 cut(s)	69, 717
BstDEI	CTNAG	7 cut(s)	623, 674, 753, 1215, 1457, 1622, 1765
BstENI	CCTNNNNNAGG	2 cut(s)	1829, 1847
BstF5I	GGATG	7 cut(s)	22, 538, 919, 1014, 1225, 1937, 1999
BstH2I	RGCGCY	2 cut(s)	764, 1390
BstHHI	GCGC	3 cut(s)	763, 1104, 1389
BstKTI	GATC	7 cut(s)	75, 330, 544, 667, 829, 1618, 1698
BstMAI	GTCTC	2 cut(s)	1108, 1165
BstMBI	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
BstMWI	GCNNNNNNNGC	3 cut(s)	1046, 1055, 1579
BstNI	CCWGG	2 cut(s)	1335, 1679
BstNSI	RCATGY	2 cut(s)	206, 593
BstSCI	CCNGG	4 cut(s)	1024, 1257, 1333, 1677
BstSFI	CTRYAG	2 cut(s)	1296, 1974
BstV1I	GCAGC	2 cut(s)	1282, 1341
BstV2I	GAAGAC	1 cut(s)	165
BstX2I	RGATCY	1 cut(s)	826
BstYI	RGATCY	1 cut(s)	826
BsuI	GTATCC	2 cut(s)	188, 1850
BsuRI	GGCC	3 cut(s)	879, 1040, 1305
BtsCI	GGATG	7 cut(s)	22, 538, 919, 1014, 1225, 1937, 1999
BtsIMutI	CAGTG	2 cut(s)	162, 1987
CaiI	CAGNNNCTG	1 cut(s)	1923
CciI	TCATGA	1 cut(s)	280
CfoI	GCGC	3 cut(s)	763, 1104, 1389
Cfr10I	RCCGGY	2 cut(s)	446, 1527
Cfr13I	GGNCC	3 cut(s)	878, 1038, 1637
Csp6I	GTAC	4 cut(s)	417, 587, 1202, 1436
CspCI	CAANNNNNGTGG	2 cut(s)	168, 203
CviAII	CATG	7 cut(s)	203, 281, 454, 464, 590, 788, 994
CviQI	GTAC	4 cut(s)	417, 587, 1202, 1436
DdeI	CTNAG	7 cut(s)	623, 674, 753, 1215, 1457, 1622, 1765
DpnI	GATC	7 cut(s)	74, 329, 543, 666, 828, 1617, 1697
DpnII	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
Eam1104I	CTCTTC	2 cut(s)	69, 717
EarI	CTCTTC	2 cut(s)	69, 717
Ecl136II	GAGCTC	1 cut(s)	1948
Eco130I	CCWWGG	2 cut(s)	1912, 1941
Eco24I	GRGCYC	1 cut(s)	1950
Eco47I	GGWCC	1 cut(s)	1637
Eco47III	AGCGCT	1 cut(s)	1388
Eco53kI	GAGCTC	1 cut(s)	1948
Eco57I	CTGAAG	2 cut(s)	761, 1577
EcoICRI	GAGCTC	1 cut(s)	1948
EcoNI	CCTNNNNNAGG	2 cut(s)	1829, 1847
EcoRII	CCWGG	2 cut(s)	1333, 1677
EcoT14I	CCWWGG	2 cut(s)	1912, 1941
EcoT38I	GRGCYC	1 cut(s)	1950
ErhI	CCWWGG	2 cut(s)	1912, 1941
FaeI	CATG	7 cut(s)	206, 284, 457, 467, 593, 791, 997
FalI	AAGNNNNNCTT	2 cut(s)	788, 820
FaqI	GGGAC	1 cut(s)	1676
FatI	CATG	7 cut(s)	202, 280, 453, 463, 589, 787, 993
FbaI	TGATCA	3 cut(s)	327, 541, 1695
Fnu4HI	GCNGC	2 cut(s)	1296, 1355
FokI	GGATG	7 cut(s)	29, 545, 926, 1001, 1232, 1924, 2006
FriOI	GRGCYC	1 cut(s)	1950
Fsp4HI	GCNGC	2 cut(s)	1296, 1355
FspBI	CTAG	6 cut(s)	95, 614, 831, 1061, 1359, 1844
GlaI	GCGC	3 cut(s)	762, 1103, 1388
GluI	GCNGC	2 cut(s)	1296, 1355
GsuI	CTGGAG	1 cut(s)	627
HaeII	RGCGCY	2 cut(s)	764, 1390
HaeIII	GGCC	3 cut(s)	879, 1040, 1305
HapII	CCGG	4 cut(s)	447, 1025, 1259, 1528
HhaI	GCGC	3 cut(s)	763, 1104, 1389
Hin1II	CATG	7 cut(s)	206, 284, 457, 467, 593, 791, 997
Hin6I	GCGC	3 cut(s)	761, 1102, 1387
HinP1I	GCGC	3 cut(s)	761, 1102, 1387
HinfI	GANTC	5 cut(s)	598, 1184, 1262, 1775, 1957
HpaII	CCGG	4 cut(s)	447, 1025, 1259, 1528
HphI	GGTGA	4 cut(s)	299, 427, 674, 1391
Hpy166II	GTNNAC	3 cut(s)	706, 802, 1280
Hpy188I	TCNGA	8 cut(s)	152, 375, 721, 741, 754, 964, 1165, 2026
Hpy188III	TCNNGA	7 cut(s)	68, 281, 296, 331, 668, 848, 1312
Hpy8I	GTNNAC	3 cut(s)	706, 802, 1280
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	1 cut(s)	1778
HpyCH4III	ACNGT	1 cut(s)	1982
HpyCH4IV	ACGT	2 cut(s)	572, 1952
HpyCH4V	TGCA	8 cut(s)	55, 386, 578, 1298, 1328, 1430, 1881, 1937
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1046, 1055, 1579
HpyF3I	CTNAG	7 cut(s)	623, 674, 753, 1215, 1457, 1622, 1765
HpySE526I	ACGT	2 cut(s)	572, 1952
Hsp92II	CATG	7 cut(s)	206, 284, 457, 467, 593, 791, 997
HspAI	GCGC	3 cut(s)	761, 1102, 1387
Ksp22I	TGATCA	3 cut(s)	327, 541, 1695
Kzo9I	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
LguI	GCTCTTC	1 cut(s)	69
LmnI	GCTCC	2 cut(s)	137, 1945
Lsp1109I	GCAGC	2 cut(s)	1282, 1341
LweI	GCATC	8 cut(s)	42, 250, 289, 904, 955, 1305, 1417, 1946
MaeI	CTAG	6 cut(s)	95, 614, 831, 1061, 1359, 1844
MaeII	ACGT	2 cut(s)	572, 1952
MaeIII	GTNAC	7 cut(s)	287, 433, 449, 646, 1250, 1397, 1987
MalI	GATC	7 cut(s)	74, 329, 543, 666, 828, 1617, 1697
MboI	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
MboII	GAAGA	9 cut(s)	56, 115, 170, 437, 700, 734, 754, 836, 1570
MflI	RGATCY	1 cut(s)	826
MhlI	GDGCHC	2 cut(s)	622, 1950
MlyI	GAGTC	2 cut(s)	607, 1769
MmeI	TCCRAC	3 cut(s)	297, 626, 791
MseI	TTAA	6 cut(s)	693, 861, 1148, 1364, 1737, 1817
MslI	CAYNNNNRTG	3 cut(s)	285, 488, 1810
MspI	CCGG	4 cut(s)	447, 1025, 1259, 1528
MspR9I	CCNGG	4 cut(s)	1026, 1259, 1335, 1679
MvaI	CCWGG	2 cut(s)	1335, 1679
MwoI	GCNNNNNNNGC	3 cut(s)	1046, 1055, 1579
NciI	CCSGG	2 cut(s)	1026, 1259
NdeII	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
NlaIII	CATG	7 cut(s)	206, 284, 457, 467, 593, 791, 997
NlaIV	GGNNCC	2 cut(s)	154, 1854
NmuCI	GTSAC	4 cut(s)	287, 433, 449, 1397
NspI	RCATGY	2 cut(s)	206, 593
PagI	TCATGA	1 cut(s)	280
PciI	ACATGT	1 cut(s)	589
PciSI	GCTCTTC	1 cut(s)	69
PfeI	GAWTC	3 cut(s)	1184, 1262, 1957
PfoI	TCCNGGA	2 cut(s)	1257, 1677
PkrI	GCNGC	2 cut(s)	1297, 1356
PleI	GAGTC	2 cut(s)	606, 1769
PpsI	GAGTC	2 cut(s)	606, 1769
PscI	ACATGT	1 cut(s)	589
Psp124BI	GAGCTC	1 cut(s)	1950
Psp6I	CCWGG	2 cut(s)	1333, 1677
PspGI	CCWGG	2 cut(s)	1333, 1677
PspN4I	GGNNCC	2 cut(s)	154, 1854
PspPI	GGNCC	3 cut(s)	878, 1038, 1637
PstI	CTGCAG	1 cut(s)	1300
PstNI	CAGNNNCTG	1 cut(s)	1923
PsuI	RGATCY	1 cut(s)	826
RsaI	GTAC	4 cut(s)	418, 588, 1203, 1437
RsaNI	GTAC	4 cut(s)	417, 587, 1202, 1436
RseI	CAYNNNNRTG	3 cut(s)	285, 488, 1810
SacI	GAGCTC	1 cut(s)	1950
SapI	GCTCTTC	1 cut(s)	69
SaqAI	TTAA	6 cut(s)	693, 861, 1148, 1364, 1737, 1817
SatI	GCNGC	2 cut(s)	1296, 1355
Sau3AI	GATC	7 cut(s)	72, 327, 541, 664, 826, 1615, 1695
Sau96I	GGNCC	3 cut(s)	878, 1038, 1637
SchI	GAGTC	2 cut(s)	607, 1769
ScrFI	CCNGG	4 cut(s)	1026, 1259, 1335, 1679
SduI	GDGCHC	2 cut(s)	622, 1950
SfaNI	GCATC	8 cut(s)	42, 250, 289, 904, 955, 1305, 1417, 1946
SfcI	CTRYAG	2 cut(s)	1296, 1974
SinI	GGWCC	1 cut(s)	1637
SmiMI	CAYNNNNRTG	3 cut(s)	285, 488, 1810
SmlI	CTYRAG	4 cut(s)	668, 882, 1382, 1403
SmoI	CTYRAG	4 cut(s)	668, 882, 1382, 1403
SsiI	CCGC	2 cut(s)	407, 1828
SspI	AATATT	3 cut(s)	654, 749, 1009
SspMI	CTAG	6 cut(s)	95, 614, 831, 1061, 1359, 1844
SstI	GAGCTC	1 cut(s)	1950
StyD4I	CCNGG	4 cut(s)	1024, 1257, 1333, 1677
StyI	CCWWGG	2 cut(s)	1912, 1941
TaaI	ACNGT	1 cut(s)	1982
TaiI	ACGT	2 cut(s)	575, 1955
TaqI	TCGA	4 cut(s)	7, 50, 75, 631
TatI	WGTACW	1 cut(s)	1201
TfiI	GAWTC	3 cut(s)	1184, 1262, 1957
Tru1I	TTAA	6 cut(s)	693, 861, 1148, 1364, 1737, 1817
Tru9I	TTAA	6 cut(s)	693, 861, 1148, 1364, 1737, 1817
TscAI	CASTG	2 cut(s)	169, 1987
TseFI	GTSAC	4 cut(s)	287, 433, 449, 1397
TseI	GCWGC	2 cut(s)	1295, 1354
Tsp45I	GTSAC	4 cut(s)	287, 433, 449, 1397
TspGWI	ACGGA	2 cut(s)	197, 2006
TspRI	CASTG	2 cut(s)	169, 1987
VpaK11BI	GGWCC	1 cut(s)	1637
XagI	CCTNNNNNAGG	2 cut(s)	1829, 1847
XapI	RAATTY	2 cut(s)	401, 1892
XceI	RCATGY	2 cut(s)	206, 593
XspI	CTAG	6 cut(s)	95, 614, 831, 1061, 1359, 1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.